data_PRDCC_000205 # _chem_comp.id PRD_000205 _chem_comp.name "DESVANCOSAMINYL VANCOMYCIN" _chem_comp.formula "C59 H62 Cl2 N8 O22" _chem_comp.formula_weight 1306.070 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000205 N1 N1 N 0 1 N N N 17.758 34.458 139.757 -9.774 -3.945 -0.375 MLU 1 N polymer 1 1 1 ? ? ? PRD_000205 C1 C1 C 0 1 N N N 17.236 35.793 139.376 -11.002 -3.238 -0.764 MLU 1 CN polymer 1 1 2 ? ? ? PRD_000205 C2 C2 C 0 1 N N R 18.395 33.659 138.645 -8.606 -3.397 -1.076 MLU 1 CA polymer 1 1 3 ? ? ? PRD_000205 C3 C3 C 0 1 N N N 19.638 32.947 139.226 -8.029 -2.257 -0.276 MLU 1 C polymer 1 1 4 ? ? ? PRD_000205 O1 O1 O 0 1 N N N 19.984 33.178 140.359 -8.202 -2.209 0.923 MLU 1 O polymer 1 1 5 ? ? ? PRD_000205 C4 C4 C 0 1 N N N 17.454 32.588 138.096 -7.549 -4.491 -1.239 MLU 1 CB polymer 1 1 6 ? ? ? PRD_000205 C5 C5 C 0 1 N N N 15.958 32.905 137.908 -8.091 -5.591 -2.154 MLU 1 CG polymer 1 1 7 ? ? ? PRD_000205 C6 C6 C 0 1 N N N 15.201 32.469 139.150 -8.308 -5.025 -3.559 MLU 1 CD1 polymer 1 1 8 ? ? ? PRD_000205 C7 C7 C 0 1 N N N 15.421 32.201 136.719 -7.086 -6.743 -2.218 MLU 1 CD2 polymer 1 1 9 ? ? ? PRD_000205 N2 N2 N 0 1 N N N 20.309 32.079 138.419 -7.321 -1.291 -0.894 OMZ 2 N polymer 1 1 10 ? ? ? PRD_000205 C8 C8 C 0 1 N N R 21.466 31.337 138.925 -6.762 -0.185 -0.119 OMZ 2 CA polymer 1 1 11 ? ? ? PRD_000205 C9 C9 C 0 1 N N N 21.324 29.805 138.651 -5.429 -0.601 0.450 OMZ 2 C polymer 1 1 12 ? ? ? PRD_000205 O2 O2 O 0 1 N N N 22.224 29.057 139.012 -4.626 -1.135 -0.283 OMZ 2 O polymer 1 1 13 ? ? ? PRD_000205 C10 C10 C 0 1 N N R 22.917 31.899 138.490 -6.627 1.046 -1.012 OMZ 2 CB polymer 1 1 14 ? ? ? PRD_000205 O3 O3 O 0 1 N N N 22.941 33.292 138.689 -6.406 0.638 -2.362 OMZ 2 OC polymer 1 1 15 ? ? ? PRD_000205 C11 C11 C 0 1 Y N N 23.236 31.632 137.035 -5.477 1.889 -0.531 OMZ 2 CG polymer 1 1 16 ? ? ? PRD_000205 C12 C12 C 0 1 Y N N 24.042 30.507 136.688 -4.393 2.121 -1.354 OMZ 2 CD1 polymer 1 1 17 ? ? ? PRD_000205 C13 C13 C 0 1 Y N N 22.598 32.373 135.998 -5.514 2.444 0.737 OMZ 2 CD2 polymer 1 1 18 ? ? ? PRD_000205 C14 C14 C 0 1 Y N N 24.157 30.119 135.347 -3.334 2.886 -0.899 OMZ 2 CE1 polymer 1 1 19 ? ? ? PRD_000205 CL1 CL1 CL 0 0 N N N 25.069 28.710 134.962 -2.012 3.224 -1.973 OMZ 2 CL polymer 1 1 20 ? ? ? PRD_000205 C15 C15 C 0 1 Y N N 22.719 31.987 134.685 -4.445 3.187 1.207 OMZ 2 CE2 polymer 1 1 21 ? ? ? PRD_000205 C16 C16 C 0 1 Y N N 23.489 30.823 134.351 -3.345 3.385 0.398 OMZ 2 CZ polymer 1 1 22 ? ? ? PRD_000205 O4 O4 O 0 1 N N N 23.447 30.270 133.060 -2.221 4.029 0.862 OMZ 2 OH polymer 1 1 23 ? ? ? PRD_000205 N3 N3 N 0 1 N N N 20.197 29.382 138.016 -5.135 -0.368 1.737 ASN 3 N polymer 1 1 24 ? ? ? PRD_000205 C17 C17 C 0 1 N N S 19.956 27.945 137.735 -4.061 -1.005 2.478 ASN 3 CA polymer 1 1 25 ? ? ? PRD_000205 C18 C18 C 0 1 N N N 19.366 27.690 136.325 -2.691 -0.563 2.049 ASN 3 C polymer 1 1 26 ? ? ? PRD_000205 O5 O5 O 0 1 N N N 18.789 26.602 136.114 -2.456 -0.360 0.879 ASN 3 O polymer 1 1 27 ? ? ? PRD_000205 C19 C19 C 0 1 N N N 19.071 27.321 138.836 -4.169 -2.528 2.353 ASN 3 CB polymer 1 1 28 ? ? ? PRD_000205 C20 C20 C 0 1 N N N 17.660 27.921 139.040 -5.437 -2.998 3.019 ASN 3 CG polymer 1 1 29 ? ? ? PRD_000205 O6 O6 O 0 1 N N N 16.856 27.439 139.868 -6.181 -2.195 3.542 ASN 3 OD1 polymer 1 1 30 ? ? ? PRD_000205 N4 N4 N 0 1 N N N 17.382 28.980 138.299 -5.744 -4.310 3.033 ASN 3 ND2 polymer 1 1 31 ? ? ? PRD_000205 N5 N5 N 0 1 N N N 19.475 28.629 135.422 -1.729 -0.395 2.982 GHP 4 N polymer 1 1 32 ? ? ? PRD_000205 C21 C21 C 0 1 N N R 18.979 28.460 134.050 -0.334 -0.128 2.619 GHP 4 CA polymer 1 1 33 ? ? ? PRD_000205 C22 C22 C 0 1 N N N 17.587 29.030 133.902 0.216 -1.332 1.895 GHP 4 C polymer 1 1 34 ? ? ? PRD_000205 O7 O7 O 0 1 N N N 17.200 30.012 134.533 -0.492 -1.929 1.112 GHP 4 O polymer 1 1 35 ? ? ? PRD_000205 C23 C23 C 0 1 Y N N 19.909 29.159 133.037 -0.257 1.079 1.724 GHP 4 C1 polymer 1 1 36 ? ? ? PRD_000205 C24 C24 C 0 1 Y N N 19.483 29.671 131.815 0.835 1.247 0.891 GHP 4 C2 polymer 1 1 37 ? ? ? PRD_000205 C25 C25 C 0 1 Y N N 20.387 30.393 130.950 0.894 2.338 0.040 GHP 4 C3 polymer 1 1 38 ? ? ? PRD_000205 C26 C26 C 0 1 Y N N 21.720 30.591 131.328 -0.072 3.326 0.076 GHP 4 C4 polymer 1 1 39 ? ? ? PRD_000205 O8 O8 O 0 1 N N N 22.629 31.163 130.417 0.055 4.452 -0.678 GHP 4 O4 polymer 1 1 40 ? ? ? PRD_000205 C27 C27 C 0 1 Y N N 22.135 30.075 132.585 -1.183 3.128 0.882 GHP 4 C5 polymer 1 1 41 ? ? ? PRD_000205 C28 C28 C 0 1 Y N N 21.221 29.366 133.385 -1.269 2.023 1.714 GHP 4 C6 polymer 1 1 42 ? ? ? PRD_000205 N6 N6 N 0 1 N N N 16.853 28.365 132.975 1.473 -1.770 2.085 GHP 5 N polymer 1 1 43 ? ? ? PRD_000205 C29 C29 C 0 1 N N R 15.572 28.845 132.620 1.962 -2.954 1.391 GHP 5 CA polymer 1 1 44 ? ? ? PRD_000205 C30 C30 C 0 1 N N N 15.356 28.400 131.132 2.277 -2.641 -0.064 GHP 5 C polymer 1 1 45 ? ? ? PRD_000205 O9 O9 O 0 1 N N N 15.891 27.350 130.766 2.479 -1.492 -0.378 GHP 5 O polymer 1 1 46 ? ? ? PRD_000205 C31 C31 C 0 1 Y N N 14.266 28.551 133.349 3.281 -3.417 1.966 GHP 5 C1 polymer 1 1 47 ? ? ? PRD_000205 C32 C32 C 0 1 Y N N 13.548 29.667 133.765 4.423 -2.737 1.587 GHP 5 C2 polymer 1 1 48 ? ? ? PRD_000205 C33 C33 C 0 1 Y N N 12.251 29.584 134.293 5.682 -3.196 1.933 GHP 5 C3 polymer 1 1 49 ? ? ? PRD_000205 C34 C34 C 0 1 Y N N 11.669 28.277 134.422 5.760 -4.319 2.777 GHP 5 C4 polymer 1 1 50 ? ? ? PRD_000205 O10 O10 O 0 1 N N N 10.369 28.184 134.888 6.957 -4.868 3.113 GHP 5 O4 polymer 1 1 51 ? ? ? PRD_000205 C35 C35 C 0 1 Y N N 12.407 27.143 134.034 4.604 -4.919 3.251 GHP 5 C5 polymer 1 1 52 ? ? ? PRD_000205 C36 C36 C 0 1 Y N N 13.703 27.257 133.500 3.359 -4.480 2.837 GHP 5 C6 polymer 1 1 53 ? ? ? PRD_000205 N7 N7 N 0 1 N N N 14.641 29.150 130.264 2.355 -3.651 -0.936 OMY 6 N polymer 1 1 54 ? ? ? PRD_000205 C37 C37 C 0 1 N N S 14.016 30.424 130.429 2.887 -3.606 -2.287 OMY 6 CA polymer 1 1 55 ? ? ? PRD_000205 O11 O11 O 0 1 N N N 20.031 30.908 129.690 1.887 2.378 -0.908 OMY 6 OCZ polymer 1 1 56 ? ? ? PRD_000205 C38 C38 C 0 1 Y N N 18.016 30.329 128.574 0.788 0.379 -1.563 OMY 6 CE2 polymer 1 1 57 ? ? ? PRD_000205 C39 C39 C 0 1 Y N N 17.957 32.213 130.137 3.023 0.791 -2.322 OMY 6 CE1 polymer 1 1 58 ? ? ? PRD_000205 C40 C40 C 0 1 Y N N 18.704 31.212 129.433 1.923 1.185 -1.583 OMY 6 CZ polymer 1 1 59 ? ? ? PRD_000205 C41 C41 C 0 1 Y N N 15.881 31.387 129.164 1.973 -1.336 -2.736 OMY 6 CG polymer 1 1 60 ? ? ? PRD_000205 C42 C42 C 0 1 Y N N 16.634 30.414 128.439 0.817 -0.887 -2.111 OMY 6 CD2 polymer 1 1 61 ? ? ? PRD_000205 C43 C43 C 0 1 Y N N 16.552 32.303 130.010 3.042 -0.475 -2.886 OMY 6 CD1 polymer 1 1 62 ? ? ? PRD_000205 C44 C44 C 0 1 N N R 14.352 31.359 129.185 2.029 -2.757 -3.224 OMY 6 CB polymer 1 1 63 ? ? ? PRD_000205 CL2 CL2 CL 0 0 N N N 18.771 33.426 131.113 4.379 1.857 -2.506 OMY 6 CL polymer 1 1 64 ? ? ? PRD_000205 O12 O12 O 0 1 N N N 11.863 29.356 130.148 4.819 -2.890 -3.385 OMY 6 O polymer 1 1 65 ? ? ? PRD_000205 C45 C45 C 0 1 N N N 12.494 30.235 130.705 4.318 -3.119 -2.301 OMY 6 C polymer 1 1 66 ? ? ? PRD_000205 O13 O13 O 0 1 N N N 13.805 30.809 128.047 2.550 -2.801 -4.552 OMY 6 ODE polymer 1 1 67 ? ? ? PRD_000205 N8 N8 N 0 1 N N N 12.006 31.077 131.621 5.006 -2.961 -1.170 3FG 7 N polymer 1 1 68 ? ? ? PRD_000205 O14 O14 O 0 1 N N N 12.385 30.825 136.877 7.966 -2.721 3.540 3FG 7 OD1 polymer 1 1 69 ? ? ? PRD_000205 C46 C46 C 0 1 Y N N 11.617 31.402 135.918 8.049 -2.492 2.202 3FG 7 CD1 polymer 1 1 70 ? ? ? PRD_000205 C47 C47 C 0 1 Y N N 11.512 30.862 134.607 6.930 -2.630 1.373 3FG 7 CG1 polymer 1 1 71 ? ? ? PRD_000205 C48 C48 C 0 1 Y N N 10.886 32.573 136.284 9.284 -2.148 1.681 3FG 7 CZ polymer 1 1 72 ? ? ? PRD_000205 C49 C49 C 0 1 Y N N 10.046 33.202 135.349 9.406 -1.882 0.327 3FG 7 CD2 polymer 1 1 73 ? ? ? PRD_000205 O15 O15 O 0 1 N Y N 9.325 34.309 135.599 10.616 -1.587 -0.212 3FG 7 OD2 polymer 1 1 74 ? ? ? PRD_000205 C50 C50 C 0 1 Y N N 9.928 32.675 134.033 8.273 -1.901 -0.477 3FG 7 CG2 polymer 1 1 75 ? ? ? PRD_000205 C51 C51 C 0 1 Y N N 10.642 31.527 133.632 7.027 -2.175 0.049 3FG 7 CB polymer 1 1 76 ? ? ? PRD_000205 C52 C52 C 0 1 N N S 10.632 31.073 132.130 5.813 -1.841 -0.772 3FG 7 CA polymer 1 1 77 ? ? ? PRD_000205 C53 C53 C 0 1 N N N 9.646 31.885 131.180 6.209 -0.996 -1.954 3FG 7 C polymer 1 1 78 ? ? ? PRD_000205 O16 O16 O 0 1 N N N 9.991 33.090 130.977 6.177 0.209 -1.873 3FG 7 O polymer 1 1 79 ? ? ? PRD_000205 O17 O17 O 0 1 N Y N 8.673 31.316 130.763 6.597 -1.582 -3.098 3FG 7 OXT polymer 1 1 80 ? ? ? PRD_000205 C54 C54 C 0 1 N N R 23.901 32.912 129.496 1.015 6.626 -1.118 BGC 8 C2 non-polymer 2 2 81 ? ? ? PRD_000205 C55 C55 C 0 1 N N S 24.640 34.220 129.727 1.603 7.865 -0.435 BGC 8 C3 non-polymer 2 2 82 ? ? ? PRD_000205 C56 C56 C 0 1 N N S 23.602 35.228 130.331 0.591 8.402 0.582 BGC 8 C4 non-polymer 2 2 83 ? ? ? PRD_000205 C57 C57 C 0 1 N N R 22.952 34.558 131.550 0.247 7.294 1.582 BGC 8 C5 non-polymer 2 2 84 ? ? ? PRD_000205 C58 C58 C 0 1 N N N 21.852 35.408 132.283 -0.808 7.804 2.566 BGC 8 C6 non-polymer 2 2 85 ? ? ? PRD_000205 C59 C59 C 0 1 N N R 23.252 32.401 130.726 0.656 5.588 -0.052 BGC 8 C1 non-polymer 2 2 86 ? ? ? PRD_000205 O18 O18 O 0 1 N N N 24.840 31.946 128.996 1.980 6.075 -2.017 BGC 8 O2 non-polymer 2 2 87 ? ? ? PRD_000205 O19 O19 O 0 1 N N N 25.232 34.724 128.552 1.873 8.869 -1.415 BGC 8 O3 non-polymer 2 2 88 ? ? ? PRD_000205 O20 O20 O 0 1 N Y N 24.224 36.446 130.738 1.157 9.514 1.278 BGC 8 O4 non-polymer 2 2 89 ? ? ? PRD_000205 O21 O21 O 0 1 N N N 22.314 33.346 131.159 -0.265 6.161 0.878 BGC 8 O5 non-polymer 2 2 90 ? ? ? PRD_000205 O22 O22 O 0 1 N N N 21.499 35.357 133.604 -1.044 6.813 3.568 BGC 8 O6 non-polymer 2 2 91 ? ? ? PRD_000205 H1 H1 H 0 1 N N N 18.444 34.590 140.472 -9.642 -3.916 0.625 MLU 1 H polymer 1 1 92 ? ? ? PRD_000205 H2 H2 H 0 0 N N N 16.797 36.281 140.259 -10.943 -2.200 -0.435 MLU 1 HCN1 polymer 1 1 93 ? ? ? PRD_000205 H3 H3 H 0 0 N N N 18.059 36.411 138.986 -11.110 -3.269 -1.848 MLU 1 HCN2 polymer 1 1 94 ? ? ? PRD_000205 H4 H4 H 0 0 N N N 16.465 35.677 138.600 -11.862 -3.719 -0.299 MLU 1 HCN3 polymer 1 1 95 ? ? ? PRD_000205 H5 H5 H 0 1 N N N 18.705 34.331 137.831 -8.908 -3.034 -2.058 MLU 1 HA polymer 1 1 96 ? ? ? PRD_000205 H6 H6 H 0 1 N N N 17.844 32.297 137.110 -6.648 -4.063 -1.679 MLU 1 HB2 polymer 1 1 97 ? ? ? PRD_000205 H7 H7 H 0 1 N N N 17.514 31.730 138.782 -7.311 -4.915 -0.263 MLU 1 HB3 polymer 1 1 98 ? ? ? PRD_000205 H8 H8 H 0 1 N N N 15.840 33.991 137.778 -9.039 -5.957 -1.760 MLU 1 HG polymer 1 1 99 ? ? ? PRD_000205 H9 H9 H 0 0 N N N 14.131 32.692 139.025 -7.360 -4.659 -3.953 MLU 1 HD11 polymer 1 1 100 ? ? ? PRD_000205 H10 H10 H 0 0 N N N 15.335 31.388 139.300 -8.694 -5.808 -4.211 MLU 1 HD12 polymer 1 1 101 ? ? ? PRD_000205 H11 H11 H 0 0 N N N 15.588 33.012 140.025 -9.024 -4.204 -3.513 MLU 1 HD13 polymer 1 1 102 ? ? ? PRD_000205 H12 H12 H 0 0 N N N 14.354 32.440 136.602 -6.932 -7.146 -1.217 MLU 1 HD21 polymer 1 1 103 ? ? ? PRD_000205 H13 H13 H 0 0 N N N 15.970 32.525 135.822 -7.472 -7.526 -2.869 MLU 1 HD22 polymer 1 1 104 ? ? ? PRD_000205 H14 H14 H 0 0 N N N 15.542 31.116 136.850 -6.138 -6.376 -2.612 MLU 1 HD23 polymer 1 1 105 ? ? ? PRD_000205 H15 H15 H 0 1 N N N 20.010 31.947 137.474 -7.183 -1.329 -1.853 OMZ 2 H polymer 1 1 106 ? ? ? PRD_000205 H16 H16 H 0 1 N N N 21.443 31.439 140.020 -7.435 0.050 0.708 OMZ 2 HA polymer 1 1 107 ? ? ? PRD_000205 H17 H17 H 0 1 N N N 23.672 31.406 139.120 -7.548 1.633 -0.961 OMZ 2 HB polymer 1 1 108 ? ? ? PRD_000205 H18 H18 H 0 1 N N N 23.791 33.634 138.436 -6.311 1.372 -2.984 OMZ 2 HC polymer 1 1 109 ? ? ? PRD_000205 H19 H19 H 0 1 N N N 24.562 29.956 137.457 -4.353 1.703 -2.348 OMZ 2 HD1 polymer 1 1 110 ? ? ? PRD_000205 H20 H20 H 0 1 N N N 22.014 33.247 136.247 -6.384 2.297 1.359 OMZ 2 HD2 polymer 1 1 111 ? ? ? PRD_000205 H21 H21 H 0 1 N N N 22.236 32.558 133.906 -4.472 3.609 2.201 OMZ 2 HE2 polymer 1 1 112 ? ? ? PRD_000205 H22 H22 H 0 1 N N N 19.515 30.056 137.732 -5.700 0.282 2.213 ASN 3 H polymer 1 1 113 ? ? ? PRD_000205 H23 H23 H 0 1 N N N 20.927 27.430 137.773 -4.181 -0.746 3.541 ASN 3 HA polymer 1 1 114 ? ? ? PRD_000205 H24 H24 H 0 1 N N N 18.945 26.256 138.593 -4.188 -2.806 1.299 ASN 3 HB2 polymer 1 1 115 ? ? ? PRD_000205 H25 H25 H 0 1 N N N 19.612 27.418 139.789 -3.311 -2.994 2.836 ASN 3 HB3 polymer 1 1 116 ? ? ? PRD_000205 H26 H26 H 0 0 N N N 16.495 29.433 138.387 -5.149 -4.952 2.615 ASN 3 HD21 polymer 1 1 117 ? ? ? PRD_000205 H27 H27 H 0 0 N N N 18.059 29.328 137.650 -6.560 -4.612 3.462 ASN 3 HD22 polymer 1 1 118 ? ? ? PRD_000205 H28 H28 H 0 1 N N N 19.911 29.493 135.674 -1.975 -0.455 3.927 GHP 4 H polymer 1 1 119 ? ? ? PRD_000205 H29 H29 H 0 1 N N N 18.948 27.388 133.806 0.247 0.047 3.524 GHP 4 HA polymer 1 1 120 ? ? ? PRD_000205 H30 H30 H 0 1 N N N 18.458 29.526 131.508 1.643 0.530 0.915 GHP 4 HC2 polymer 1 1 121 ? ? ? PRD_000205 H31 H31 H 0 1 N N N 21.570 28.962 134.324 -2.124 1.903 2.363 GHP 4 H6 polymer 1 1 122 ? ? ? PRD_000205 H32 H32 H 0 1 N N N 17.217 27.539 132.545 2.057 -1.288 2.688 GHP 5 H polymer 1 1 123 ? ? ? PRD_000205 H33 H33 H 0 1 N N N 15.645 29.942 132.581 1.236 -3.757 1.442 GHP 5 HA polymer 1 1 124 ? ? ? PRD_000205 H34 H34 H 0 1 N N N 14.009 30.640 133.678 4.306 -1.803 1.058 GHP 5 HC2 polymer 1 1 125 ? ? ? PRD_000205 H35 H35 H 0 1 N N N 10.110 27.271 134.925 7.308 -4.560 3.959 GHP 5 HO4 polymer 1 1 126 ? ? ? PRD_000205 H36 H36 H 0 1 N N N 11.968 26.163 134.149 4.678 -5.731 3.961 GHP 5 H5 polymer 1 1 127 ? ? ? PRD_000205 H37 H37 H 0 1 N N N 14.259 26.377 133.211 2.465 -4.971 3.188 GHP 5 H6 polymer 1 1 128 ? ? ? PRD_000205 H38 H38 H 0 1 N N N 14.531 28.746 129.356 2.004 -4.519 -0.628 OMY 6 H polymer 1 1 129 ? ? ? PRD_000205 H39 H39 H 0 1 N N N 14.445 30.913 131.316 2.896 -4.637 -2.686 OMY 6 HA polymer 1 1 130 ? ? ? PRD_000205 H40 H40 H 0 1 N N N 18.565 29.583 128.018 -0.129 0.734 -1.117 OMY 6 HE2 polymer 1 1 131 ? ? ? PRD_000205 H41 H41 H 0 1 N N N 16.122 29.733 127.775 -0.047 -1.528 -2.048 OMY 6 HD2 polymer 1 1 132 ? ? ? PRD_000205 H42 H42 H 0 1 N N N 15.999 33.058 130.549 3.894 -0.781 -3.476 OMY 6 HD1 polymer 1 1 133 ? ? ? PRD_000205 H43 H43 H 0 1 N N N 13.964 32.369 129.383 1.010 -3.167 -3.234 OMY 6 HB polymer 1 1 134 ? ? ? PRD_000205 H44 H44 H 0 1 N N N 12.857 30.817 128.115 2.046 -2.280 -5.190 OMY 6 HDE polymer 1 1 135 ? ? ? PRD_000205 H45 H45 H 0 1 N N N 12.630 31.766 131.989 4.962 -3.719 -0.540 3FG 7 H polymer 1 1 136 ? ? ? PRD_000205 H46 H46 H 0 1 N N N 10.277 30.032 132.122 5.185 -1.176 -0.147 3FG 7 HA polymer 1 1 137 ? ? ? PRD_000205 H47 H47 H 0 1 N N N 12.324 31.331 137.679 7.666 -1.958 4.052 3FG 7 HD1 polymer 1 1 138 ? ? ? PRD_000205 H48 H48 H 0 1 N N N 10.979 32.976 137.282 10.144 -2.077 2.330 3FG 7 HZ polymer 1 1 139 ? ? ? PRD_000205 H49 H49 H 0 1 N Y N 8.835 34.551 134.822 11.108 -2.359 -0.524 3FG 7 HD2 polymer 1 1 140 ? ? ? PRD_000205 H50 H50 H 0 1 N N N 9.277 33.165 133.325 8.442 -1.755 -1.533 3FG 7 HG2 polymer 1 1 141 ? ? ? PRD_000205 H51 H51 H 0 1 N N N 8.161 31.913 130.230 6.842 -0.998 -3.829 3FG 7 HXT polymer 1 1 142 ? ? ? PRD_000205 H52 H52 H 0 1 N N N 23.124 33.088 128.737 0.119 6.906 -1.671 BGC 8 H2 non-polymer 2 2 143 ? ? ? PRD_000205 H53 H53 H 0 1 N N N 25.416 34.046 130.487 2.526 7.595 0.078 BGC 8 H3 non-polymer 2 2 144 ? ? ? PRD_000205 H54 H54 H 0 1 N N N 22.827 35.426 129.576 -0.314 8.717 0.064 BGC 8 H4 non-polymer 2 2 145 ? ? ? PRD_000205 H55 H55 H 0 1 N N N 23.744 34.337 132.281 1.145 7.007 2.129 BGC 8 H5 non-polymer 2 2 146 ? ? ? PRD_000205 H56 H56 H 0 0 N N N 22.146 36.454 132.112 -0.453 8.720 3.037 BGC 8 H6C1 non-polymer 2 2 147 ? ? ? PRD_000205 H57 H57 H 0 0 N N N 20.922 35.194 131.736 -1.736 8.007 2.030 BGC 8 H6C2 non-polymer 2 2 148 ? ? ? PRD_000205 H58 H58 H 0 1 N N N 24.020 32.249 131.499 1.559 5.278 0.473 BGC 8 H1 non-polymer 2 2 149 ? ? ? PRD_000205 H59 H59 H 0 1 N N N 24.395 31.120 128.845 1.674 5.286 -2.485 BGC 8 HB non-polymer 2 2 150 ? ? ? PRD_000205 H60 H60 H 0 1 N N N 25.680 35.539 128.747 2.503 8.594 -2.096 BGC 8 HC non-polymer 2 2 151 ? ? ? PRD_000205 H61 H61 H 0 1 N N N 23.569 37.032 131.098 1.403 10.253 0.704 BGC 8 HD non-polymer 2 2 152 ? ? ? PRD_000205 H62 H62 H 0 1 N N N 20.804 35.983 133.771 -1.704 7.069 4.227 BGC 8 H6 non-polymer 2 2 153 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000205 N1 C1 SING N N 1 PRD_000205 N1 C2 SING N N 2 PRD_000205 C2 C3 SING N N 3 PRD_000205 C2 C4 SING N N 4 PRD_000205 C3 O1 DOUB N N 5 PRD_000205 C4 C5 SING N N 6 PRD_000205 C5 C6 SING N N 7 PRD_000205 C5 C7 SING N N 8 PRD_000205 N1 H1 SING N N 9 PRD_000205 C1 H2 SING N N 10 PRD_000205 C1 H3 SING N N 11 PRD_000205 C1 H4 SING N N 12 PRD_000205 C2 H5 SING N N 13 PRD_000205 C4 H6 SING N N 14 PRD_000205 C4 H7 SING N N 15 PRD_000205 C5 H8 SING N N 16 PRD_000205 C6 H9 SING N N 17 PRD_000205 C6 H10 SING N N 18 PRD_000205 C6 H11 SING N N 19 PRD_000205 C7 H12 SING N N 20 PRD_000205 C7 H13 SING N N 21 PRD_000205 C7 H14 SING N N 22 PRD_000205 N2 C8 SING N N 23 PRD_000205 C8 C9 SING N N 24 PRD_000205 C8 C10 SING N N 25 PRD_000205 C9 O2 DOUB N N 26 PRD_000205 CL1 C14 SING N N 27 PRD_000205 C10 O3 SING N N 28 PRD_000205 C10 C11 SING N N 29 PRD_000205 C11 C12 DOUB Y N 30 PRD_000205 C11 C13 SING Y N 31 PRD_000205 C12 C14 SING Y N 32 PRD_000205 C13 C15 DOUB Y N 33 PRD_000205 C14 C16 DOUB Y N 34 PRD_000205 C15 C16 SING Y N 35 PRD_000205 C16 O4 SING N N 36 PRD_000205 N2 H15 SING N N 37 PRD_000205 C8 H16 SING N N 38 PRD_000205 C10 H17 SING N N 39 PRD_000205 O3 H18 SING N N 40 PRD_000205 C12 H19 SING N N 41 PRD_000205 C13 H20 SING N N 42 PRD_000205 C15 H21 SING N N 43 PRD_000205 N3 C17 SING N N 44 PRD_000205 N3 H22 SING N N 45 PRD_000205 C17 C18 SING N N 46 PRD_000205 C17 C19 SING N N 47 PRD_000205 C17 H23 SING N N 48 PRD_000205 C18 O5 DOUB N N 49 PRD_000205 C19 C20 SING N N 50 PRD_000205 C19 H24 SING N N 51 PRD_000205 C19 H25 SING N N 52 PRD_000205 C20 O6 DOUB N N 53 PRD_000205 C20 N4 SING N N 54 PRD_000205 N4 H26 SING N N 55 PRD_000205 N4 H27 SING N N 56 PRD_000205 N5 C21 SING N N 57 PRD_000205 N5 H28 SING N N 58 PRD_000205 C21 C22 SING N N 59 PRD_000205 C21 C23 SING N N 60 PRD_000205 C21 H29 SING N N 61 PRD_000205 C22 O7 DOUB N N 62 PRD_000205 C23 C24 DOUB Y N 63 PRD_000205 C23 C28 SING Y N 64 PRD_000205 C24 C25 SING Y N 65 PRD_000205 C24 H30 SING N N 66 PRD_000205 C25 C26 DOUB Y N 67 PRD_000205 C26 O8 SING N N 68 PRD_000205 C26 C27 SING Y N 69 PRD_000205 C27 C28 DOUB Y N 70 PRD_000205 C28 H31 SING N N 71 PRD_000205 N6 C29 SING N N 72 PRD_000205 N6 H32 SING N N 73 PRD_000205 C29 C30 SING N N 74 PRD_000205 C29 C31 SING N N 75 PRD_000205 C29 H33 SING N N 76 PRD_000205 C30 O9 DOUB N N 77 PRD_000205 C31 C32 DOUB Y N 78 PRD_000205 C31 C36 SING Y N 79 PRD_000205 C32 C33 SING Y N 80 PRD_000205 C32 H34 SING N N 81 PRD_000205 C33 C34 DOUB Y N 82 PRD_000205 C34 O10 SING N N 83 PRD_000205 C34 C35 SING Y N 84 PRD_000205 O10 H35 SING N N 85 PRD_000205 C35 C36 DOUB Y N 86 PRD_000205 C35 H36 SING N N 87 PRD_000205 C36 H37 SING N N 88 PRD_000205 N7 C37 SING N N 89 PRD_000205 O11 C40 SING N N 90 PRD_000205 C40 C38 SING Y N 91 PRD_000205 C40 C39 DOUB Y N 92 PRD_000205 C38 C42 DOUB Y N 93 PRD_000205 C42 C41 SING Y N 94 PRD_000205 C41 C43 DOUB Y N 95 PRD_000205 C41 C44 SING N N 96 PRD_000205 C43 C39 SING Y N 97 PRD_000205 C39 CL2 SING N N 98 PRD_000205 C45 O12 DOUB N N 99 PRD_000205 C45 C37 SING N N 100 PRD_000205 C37 C44 SING N N 101 PRD_000205 C44 O13 SING N N 102 PRD_000205 N7 H38 SING N N 103 PRD_000205 C37 H39 SING N N 104 PRD_000205 C38 H40 SING N N 105 PRD_000205 C42 H41 SING N N 106 PRD_000205 C43 H42 SING N N 107 PRD_000205 C44 H43 SING N N 108 PRD_000205 O13 H44 SING N N 109 PRD_000205 N8 C52 SING N N 110 PRD_000205 O14 C46 SING N N 111 PRD_000205 C46 C47 SING Y N 112 PRD_000205 C46 C48 DOUB Y N 113 PRD_000205 C47 C51 DOUB Y N 114 PRD_000205 C48 C49 SING Y N 115 PRD_000205 C49 O15 SING N N 116 PRD_000205 C49 C50 DOUB Y N 117 PRD_000205 C50 C51 SING Y N 118 PRD_000205 C51 C52 SING N N 119 PRD_000205 C52 C53 SING N N 120 PRD_000205 C53 O16 DOUB N N 121 PRD_000205 C53 O17 SING N N 122 PRD_000205 N8 H45 SING N N 123 PRD_000205 C52 H46 SING N N 124 PRD_000205 O14 H47 SING N N 125 PRD_000205 C48 H48 SING N N 126 PRD_000205 O15 H49 SING N N 127 PRD_000205 C50 H50 SING N N 128 PRD_000205 O17 H51 SING N N 129 PRD_000205 C54 C55 SING N N 130 PRD_000205 C54 C59 SING N N 131 PRD_000205 C54 O18 SING N N 132 PRD_000205 C54 H52 SING N N 133 PRD_000205 C55 C56 SING N N 134 PRD_000205 C55 O19 SING N N 135 PRD_000205 C55 H53 SING N N 136 PRD_000205 C56 C57 SING N N 137 PRD_000205 C56 O20 SING N N 138 PRD_000205 C56 H54 SING N N 139 PRD_000205 C57 C58 SING N N 140 PRD_000205 C57 O21 SING N N 141 PRD_000205 C57 H55 SING N N 142 PRD_000205 C58 O22 SING N N 143 PRD_000205 C58 H56 SING N N 144 PRD_000205 C58 H57 SING N N 145 PRD_000205 C59 O21 SING N N 146 PRD_000205 C59 H58 SING N N 147 PRD_000205 O18 H59 SING N N 148 PRD_000205 O19 H60 SING N N 149 PRD_000205 O20 H61 SING N N 150 PRD_000205 O22 H62 SING N N 151 PRD_000205 C3 N2 SING N N 152 PRD_000205 C9 N3 SING N N 153 PRD_000205 O4 C27 SING N N 154 PRD_000205 C18 N5 SING N N 155 PRD_000205 C22 N6 SING N N 156 PRD_000205 C25 O11 SING N N 157 PRD_000205 C33 C47 SING N N 158 PRD_000205 C30 N7 SING N N 159 PRD_000205 C45 N8 SING N N 160 PRD_000205 O8 C59 SING N N 161 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000205 SMILES ACDLabs 12.01 "O=C(O)C3c1cc(O)cc(O)c1c2c(O)ccc(c2)C8C(=O)NC(C(=O)N3)C(O)c9ccc(Oc7c(OC4OC(CO)C(O)C(O)C4O)c6Oc5ccc(cc5Cl)C(O)C(NC(=O)C(NC)CC(C)C)C(=O)NC(C(=O)NC(c(c6)c7)C(=O)N8)CC(=O)N)c(Cl)c9" PRD_000205 InChI InChI 1.03 "InChI=1S/C59H62Cl2N8O22/c1-20(2)10-30(63-3)52(80)68-44-46(75)22-5-8-34(28(60)12-22)88-36-14-24-15-37(51(36)91-59-50(79)49(78)48(77)38(19-70)90-59)89-35-9-6-23(13-29(35)61)47(76)45-57(85)67-43(58(86)87)27-16-25(71)17-33(73)40(27)26-11-21(4-7-32(26)72)41(54(82)69-45)66-55(83)42(24)65-53(81)31(18-39(62)74)64-56(44)84/h4-9,11-17,20,30-31,38,41-50,59,63,70-73,75-79H,10,18-19H2,1-3H3,(H2,62,74)(H,64,84)(H,65,81)(H,66,83)(H,67,85)(H,68,80)(H,69,82)(H,86,87)" PRD_000205 InChIKey InChI 1.03 QCHYVJAUGVHJHX-UHFFFAOYSA-N PRD_000205 SMILES_CANONICAL CACTVS 3.370 "CN[C@H](CC(C)C)C(=O)N[C@@H]1[C@H](O)c2ccc(Oc3cc4cc(Oc5ccc(cc5Cl)[C@@H](O)[C@@H]6NC(=O)[C@H](NC(=O)[C@@H]4NC(=O)[C@H](CC(N)=O)NC1=O)c7ccc(O)c(c7)c8c(O)cc(O)cc8[C@H](NC6=O)C(O)=O)c3O[C@@H]9O[C@H](CO)[C@@H](O)[C@H](O)[C@H]9O)c(Cl)c2" PRD_000205 SMILES CACTVS 3.370 "CN[CH](CC(C)C)C(=O)N[CH]1[CH](O)c2ccc(Oc3cc4cc(Oc5ccc(cc5Cl)[CH](O)[CH]6NC(=O)[CH](NC(=O)[CH]4NC(=O)[CH](CC(N)=O)NC1=O)c7ccc(O)c(c7)c8c(O)cc(O)cc8[CH](NC6=O)C(O)=O)c3O[CH]9O[CH](CO)[CH](O)[CH](O)[CH]9O)c(Cl)c2" PRD_000205 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)C[C@H](C(=O)N[C@@H]1[C@@H](c2ccc(c(c2)Cl)Oc3cc4cc(c3O[C@@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)Oc6ccc(cc6Cl)[C@H]([C@H]7C(=O)N[C@@H](c8cc(cc(c8-c9cc(ccc9O)[C@H](C(=O)N7)NC(=O)[C@@H]4NC(=O)[C@@H](NC1=O)CC(=O)N)O)O)C(=O)O)O)O)NC" PRD_000205 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)CC(C(=O)NC1C(c2ccc(c(c2)Cl)Oc3cc4cc(c3OC5C(C(C(C(O5)CO)O)O)O)Oc6ccc(cc6Cl)C(C7C(=O)NC(c8cc(cc(c8-c9cc(ccc9O)C(C(=O)N7)NC(=O)C4NC(=O)C(NC1=O)CC(=O)N)O)O)C(=O)O)O)O)NC" # _pdbx_chem_comp_identifier.comp_id PRD_000205 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "(1R,2S,18S,19S,22R,25R,28S,40S)-22-(2-amino-2-oxoethyl)-5,15-dichloro-2,18,32,35,37-pentahydroxy-19-{[(2R)-4-methyl-2-(methylamino)pentanoyl]amino}-20,23,26,42,44-pentaoxo-48-{[(2R,3R,4R,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}-7,13-dioxa-21,24,27,41,43-pentaazaoctacyclo[26.14.2.2~3,6~.2~14,17~.1~8,12~.1~29,33~.0~10,25~.0~34,39~]pentaconta-3,5,8(48),9,11,14,16,29(45),30,32,34,36,38,46,49-pentadecaene-40-carboxylic acid (non-preferred name)" #