data_PRDCC_000239 # _chem_comp.id PRD_000239 _chem_comp.name "N-acetyl-L-alpha-aspartyl-L-valyl-N-[(1S)-1-(carboxymethyl)-3-fluoro-2-oxopropyl]-L-alaninamide" _chem_comp.formula "C19 H29 F N4 O9" _chem_comp.formula_weight 476.453 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000239 C1 C1 C 0 1 N N N 22.878 16.554 45.482 6.917 -1.348 0.363 ACE 1 C polymer 1 1 1 ? ? ? PRD_000239 O1 O1 O 0 1 N N N 22.711 15.322 45.534 6.689 -1.162 1.540 ACE 1 O polymer 1 1 2 ? ? ? PRD_000239 C2 C2 C 0 1 N N N 23.184 17.376 46.738 7.952 -2.361 -0.052 ACE 1 CH3 polymer 1 1 3 ? ? ? PRD_000239 N1 N1 N 0 1 N N N 22.807 17.246 44.350 6.241 -0.653 -0.573 ASP 2 N polymer 1 1 4 ? ? ? PRD_000239 C3 C3 C 0 1 N N S 22.516 16.604 43.089 5.156 0.248 -0.175 ASP 2 CA polymer 1 1 5 ? ? ? PRD_000239 C4 C4 C 0 1 N N N 23.749 16.301 42.274 3.873 -0.533 -0.057 ASP 2 C polymer 1 1 6 ? ? ? PRD_000239 O2 O2 O 0 1 N N N 24.553 17.194 42.006 3.865 -1.724 -0.283 ASP 2 O polymer 1 1 7 ? ? ? PRD_000239 C5 C5 C 0 1 N N N 21.605 17.504 42.256 4.991 1.344 -1.230 ASP 2 CB polymer 1 1 8 ? ? ? PRD_000239 C6 C6 C 0 1 N N N 20.265 17.713 42.895 6.238 2.189 -1.276 ASP 2 CG polymer 1 1 9 ? ? ? PRD_000239 O3 O3 O 0 1 N N N 19.585 16.709 43.150 7.121 2.007 -0.471 ASP 2 OD1 polymer 1 1 10 ? ? ? PRD_000239 O4 O4 O 0 1 N N N 19.892 18.871 43.137 6.368 3.144 -2.211 ASP 2 OD2 polymer 1 1 11 ? ? ? PRD_000239 N2 N2 N 0 1 N N N 23.886 15.040 41.880 2.734 0.093 0.300 VAL 3 N polymer 1 1 12 ? ? ? PRD_000239 C7 C7 C 0 1 N N S 24.986 14.618 41.027 1.486 -0.666 0.415 VAL 3 CA polymer 1 1 13 ? ? ? PRD_000239 C8 C8 C 0 1 N N N 24.441 13.985 39.739 0.315 0.259 0.211 VAL 3 C polymer 1 1 14 ? ? ? PRD_000239 O5 O5 O 0 1 N N N 23.311 13.502 39.712 0.464 1.458 0.312 VAL 3 O polymer 1 1 15 ? ? ? PRD_000239 C9 C9 C 0 1 N N N 25.934 13.641 41.732 1.401 -1.300 1.805 VAL 3 CB polymer 1 1 16 ? ? ? PRD_000239 C10 C10 C 0 1 N N N 26.572 14.335 42.879 2.523 -2.327 1.967 VAL 3 CG1 polymer 1 1 17 ? ? ? PRD_000239 C11 C11 C 0 1 N N N 25.200 12.421 42.196 1.548 -0.212 2.871 VAL 3 CG2 polymer 1 1 18 ? ? ? PRD_000239 N3 N3 N 0 1 N N N 25.260 14.012 38.686 -0.900 -0.246 -0.082 ALA 4 N polymer 1 1 19 ? ? ? PRD_000239 C12 C12 C 0 1 N N S 24.922 13.493 37.378 -2.014 0.655 -0.389 ALA 4 CA polymer 1 1 20 ? ? ? PRD_000239 C13 C13 C 0 1 N N N 25.333 12.042 37.194 -3.318 -0.034 -0.080 ALA 4 C polymer 1 1 21 ? ? ? PRD_000239 O6 O6 O 0 1 N N N 26.347 11.599 37.705 -3.317 -1.167 0.353 ALA 4 O polymer 1 1 22 ? ? ? PRD_000239 C14 C14 C 0 1 N N N 25.576 14.347 36.336 -1.973 1.030 -1.871 ALA 4 CB polymer 1 1 23 ? ? ? PRD_000239 N4 N4 N 0 1 N N N 24.521 11.288 36.477 -4.485 0.608 -0.286 ASP 5 N polymer 1 1 24 ? ? ? PRD_000239 C15 C15 C 0 1 N N S 24.816 9.893 36.202 -5.752 -0.062 0.014 ASP 5 CA polymer 1 1 25 ? ? ? PRD_000239 C16 C16 C 0 1 N N N 25.457 9.769 34.824 -6.170 -0.899 -1.168 ASP 5 C polymer 1 1 26 ? ? ? PRD_000239 O7 O7 O 0 1 N N N 25.561 8.630 34.319 -5.645 -0.730 -2.242 ASP 5 O polymer 1 1 27 ? ? ? PRD_000239 C17 C17 C 0 1 N N N 23.533 9.059 36.276 -6.828 0.986 0.303 ASP 5 CB polymer 1 1 28 ? ? ? PRD_000239 C18 C18 C 0 1 N N N 23.278 8.496 37.671 -6.470 1.741 1.557 ASP 5 CG polymer 1 1 29 ? ? ? PRD_000239 O8 O8 O 0 1 N N N 24.267 8.243 38.410 -5.458 1.468 2.158 ASP 5 OD1 polymer 1 1 30 ? ? ? PRD_000239 O9 O9 O 0 1 N N N 22.084 8.304 38.029 -7.275 2.717 2.007 ASP 5 OD2 polymer 1 1 31 ? ? ? PRD_000239 C19 C19 C 0 1 N N N 26.188 10.911 34.156 -7.243 -1.945 -1.009 CF0 6 C1 polymer 1 1 32 ? ? ? PRD_000239 F1 F1 F 0 1 N Y N ? ? ? -7.456 -2.585 -2.235 CF0 6 F1 polymer 1 1 33 ? ? ? PRD_000239 H1 H1 H 0 1 N N N 23.221 16.710 47.613 8.386 -2.822 0.835 ACE 1 H1 polymer 1 1 34 ? ? ? PRD_000239 H2 H2 H 0 1 N N N 24.155 17.880 46.619 7.483 -3.129 -0.668 ACE 1 H2 polymer 1 1 35 ? ? ? PRD_000239 H3 H3 H 0 1 N N N 22.396 18.129 46.884 8.737 -1.866 -0.624 ACE 1 H3 polymer 1 1 36 ? ? ? PRD_000239 H4 H4 H 0 1 N N N 22.959 18.234 44.371 6.473 -0.748 -1.510 ASP 2 H polymer 1 1 37 ? ? ? PRD_000239 H5 H5 H 0 1 N N N 21.985 15.660 43.278 5.395 0.702 0.787 ASP 2 HA polymer 1 1 38 ? ? ? PRD_000239 H6 H6 H 0 1 N N N 22.093 18.482 42.132 4.825 0.888 -2.205 ASP 2 HB2 polymer 1 1 39 ? ? ? PRD_000239 H7 H7 H 0 1 N N N 21.457 17.040 41.270 4.137 1.971 -0.972 ASP 2 HB3 polymer 1 1 40 ? ? ? PRD_000239 H8 H8 H 0 1 N N N 19.030 18.850 43.535 7.186 3.660 -2.200 ASP 2 HD2 polymer 1 1 41 ? ? ? PRD_000239 H9 H9 H 0 1 N N N 23.214 14.362 42.178 2.740 1.046 0.480 VAL 3 H polymer 1 1 42 ? ? ? PRD_000239 H10 H10 H 0 1 N N N 25.571 15.505 40.742 1.466 -1.450 -0.343 VAL 3 HA polymer 1 1 43 ? ? ? PRD_000239 H11 H11 H 0 1 N N N 26.714 13.337 41.018 0.436 -1.794 1.921 VAL 3 HB polymer 1 1 44 ? ? ? PRD_000239 H12 H12 H 0 0 N N N 27.255 13.643 43.393 3.484 -1.815 1.991 VAL 3 HG11 polymer 1 1 45 ? ? ? PRD_000239 H13 H13 H 0 0 N N N 27.138 15.204 42.513 2.380 -2.877 2.898 VAL 3 HG12 polymer 1 1 46 ? ? ? PRD_000239 H14 H14 H 0 0 N N N 25.795 14.673 43.581 2.503 -3.023 1.128 VAL 3 HG13 polymer 1 1 47 ? ? ? PRD_000239 H15 H15 H 0 0 N N N 25.902 11.738 42.697 0.748 0.520 2.755 VAL 3 HG21 polymer 1 1 48 ? ? ? PRD_000239 H16 H16 H 0 0 N N N 24.409 12.715 42.901 1.487 -0.663 3.861 VAL 3 HG22 polymer 1 1 49 ? ? ? PRD_000239 H17 H17 H 0 0 N N N 24.750 11.913 41.331 2.512 0.282 2.755 VAL 3 HG23 polymer 1 1 50 ? ? ? PRD_000239 H18 H18 H 0 1 N N N 26.166 14.417 38.809 -1.037 -1.206 -0.091 ALA 4 H polymer 1 1 51 ? ? ? PRD_000239 H19 H19 H 0 1 N N N 23.832 13.557 37.241 -1.928 1.558 0.217 ALA 4 HA polymer 1 1 52 ? ? ? PRD_000239 H20 H20 H 0 1 N N N 25.326 13.962 35.336 -2.059 0.128 -2.477 ALA 4 HB1 polymer 1 1 53 ? ? ? PRD_000239 H21 H21 H 0 1 N N N 25.215 15.382 36.431 -2.802 1.701 -2.099 ALA 4 HB2 polymer 1 1 54 ? ? ? PRD_000239 H22 H22 H 0 1 N N N 26.667 14.325 36.475 -1.030 1.529 -2.095 ALA 4 HB3 polymer 1 1 55 ? ? ? PRD_000239 H23 H23 H 0 1 N N N 23.680 11.688 36.113 -4.485 1.514 -0.632 ASP 5 H polymer 1 1 56 ? ? ? PRD_000239 H24 H24 H 0 1 N N N 25.523 9.512 36.953 -5.627 -0.704 0.887 ASP 5 HA polymer 1 1 57 ? ? ? PRD_000239 H25 H25 H 0 1 N N N 22.682 9.696 35.992 -6.891 1.682 -0.534 ASP 5 HB2 polymer 1 1 58 ? ? ? PRD_000239 H26 H26 H 0 1 N N N 23.616 8.221 35.568 -7.790 0.492 0.439 ASP 5 HB3 polymer 1 1 59 ? ? ? PRD_000239 H27 H27 H 0 1 N N N 22.070 7.952 38.911 -7.003 3.172 2.815 ASP 5 HD2 polymer 1 1 60 ? ? ? PRD_000239 H28 H28 H 0 1 N N N 27.266 10.761 33.998 -6.929 -2.678 -0.266 CF0 6 H1 polymer 1 1 61 ? ? ? PRD_000239 H29 H29 H 0 1 N N N 26.016 11.907 34.590 -8.168 -1.470 -0.682 CF0 6 H2 polymer 1 1 62 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000239 C1 O1 DOUB N N 1 PRD_000239 C1 C2 SING N N 2 PRD_000239 C2 H1 SING N N 3 PRD_000239 C2 H2 SING N N 4 PRD_000239 C2 H3 SING N N 5 PRD_000239 N1 C3 SING N N 6 PRD_000239 N1 H4 SING N N 7 PRD_000239 C3 C4 SING N N 8 PRD_000239 C3 C5 SING N N 9 PRD_000239 C3 H5 SING N N 10 PRD_000239 C4 O2 DOUB N N 11 PRD_000239 C5 C6 SING N N 12 PRD_000239 C5 H6 SING N N 13 PRD_000239 C5 H7 SING N N 14 PRD_000239 C6 O3 DOUB N N 15 PRD_000239 C6 O4 SING N N 16 PRD_000239 O4 H8 SING N N 17 PRD_000239 N2 C7 SING N N 18 PRD_000239 N2 H9 SING N N 19 PRD_000239 C7 C8 SING N N 20 PRD_000239 C7 C9 SING N N 21 PRD_000239 C7 H10 SING N N 22 PRD_000239 C8 O5 DOUB N N 23 PRD_000239 C9 C10 SING N N 24 PRD_000239 C9 C11 SING N N 25 PRD_000239 C9 H11 SING N N 26 PRD_000239 C10 H12 SING N N 27 PRD_000239 C10 H13 SING N N 28 PRD_000239 C10 H14 SING N N 29 PRD_000239 C11 H15 SING N N 30 PRD_000239 C11 H16 SING N N 31 PRD_000239 C11 H17 SING N N 32 PRD_000239 N3 C12 SING N N 33 PRD_000239 N3 H18 SING N N 34 PRD_000239 C12 C13 SING N N 35 PRD_000239 C12 C14 SING N N 36 PRD_000239 C12 H19 SING N N 37 PRD_000239 C13 O6 DOUB N N 38 PRD_000239 C14 H20 SING N N 39 PRD_000239 C14 H21 SING N N 40 PRD_000239 C14 H22 SING N N 41 PRD_000239 N4 C15 SING N N 42 PRD_000239 N4 H23 SING N N 43 PRD_000239 C15 C16 SING N N 44 PRD_000239 C15 C17 SING N N 45 PRD_000239 C15 H24 SING N N 46 PRD_000239 C16 O7 DOUB N N 47 PRD_000239 C17 C18 SING N N 48 PRD_000239 C17 H25 SING N N 49 PRD_000239 C17 H26 SING N N 50 PRD_000239 C18 O8 DOUB N N 51 PRD_000239 C18 O9 SING N N 52 PRD_000239 O9 H27 SING N N 53 PRD_000239 C19 F1 SING N N 54 PRD_000239 C19 H28 SING N N 55 PRD_000239 C19 H29 SING N N 56 PRD_000239 C1 N1 SING N N 57 PRD_000239 C16 C19 SING N N 58 PRD_000239 C4 N2 SING N N 59 PRD_000239 C8 N3 SING N N 60 PRD_000239 C13 N4 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000239 SMILES ACDLabs 12.01 "O=C(NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)CF)CC(=O)O)C)C(C)C)CC(=O)O)C" PRD_000239 InChI InChI 1.03 "InChI=1S/C19H29FN4O9/c1-8(2)16(24-18(32)12(6-15(29)30)22-10(4)25)19(33)21-9(3)17(31)23-11(5-14(27)28)13(26)7-20/h8-9,11-12,16H,5-7H2,1-4H3,(H,21,33)(H,22,25)(H,23,31)(H,24,32)(H,27,28)(H,29,30)/t9-,11+,12?,16?/m0/s1" PRD_000239 InChIKey InChI 1.03 YXORVUGPTYBNIK-DFEGOZKCSA-N PRD_000239 SMILES_CANONICAL CACTVS 3.370 "CC(C)[C@H](NC(=O)[C@H](CC(O)=O)NC(C)=O)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(O)=O)C(=O)CF" PRD_000239 SMILES CACTVS 3.370 "CC(C)[CH](NC(=O)[CH](CC(O)=O)NC(C)=O)C(=O)N[CH](C)C(=O)N[CH](CC(O)=O)C(=O)CF" PRD_000239 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H](C(=O)N[C@@H](CC(=O)O)C(=O)CF)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(=O)O)NC(=O)C" PRD_000239 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)C(C(=O)NC(C)C(=O)NC(CC(=O)O)C(=O)CF)NC(=O)C(CC(=O)O)NC(=O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000239 "SYSTEMATIC NAME" ACDLabs 12.01 "N-acetyl-L-alpha-aspartyl-L-valyl-N-[(2R)-1-carboxy-4-fluoro-3-oxobutan-2-yl]-L-alaninamide" PRD_000239 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(3S)-3-[[(2S)-2-[[(2S)-2-[[(2S)-2-acetamido-4-oxidanyl-4-oxidanylidene-butanoyl]amino]-3-methyl-butanoyl]amino]propanoyl]amino]-5-fluoranyl-4-oxidanylidene-pentanoic acid" #