data_PRDCC_000309 # _chem_comp.id PRD_000309 _chem_comp.name "L-leucyl-N-(2-oxopropyl)-L-phenylalaninamide" _chem_comp.formula "C26 H31 N5 O5" _chem_comp.formula_weight 493.555 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000309 C1 C1 C 0 1 N N N ? ? ? 3.413 0.780 0.327 PHQ 1 C1 polymer 1 1 1 ? ? ? PRD_000309 O1 O1 O 0 1 N N N ? ? ? 3.496 1.490 1.309 PHQ 1 O1 polymer 1 1 2 ? ? ? PRD_000309 O2 O2 O 0 1 N N N ? ? ? 4.521 0.223 -0.197 PHQ 1 O2 polymer 1 1 3 ? ? ? PRD_000309 C2 C2 C 0 1 N N N ? ? ? 5.781 0.516 0.463 PHQ 1 C2 polymer 1 1 4 ? ? ? PRD_000309 C3 C3 C 0 1 Y N N ? ? ? 6.901 -0.188 -0.259 PHQ 1 C3 polymer 1 1 5 ? ? ? PRD_000309 C4 C4 C 0 1 Y N N ? ? ? 7.562 0.445 -1.295 PHQ 1 C4 polymer 1 1 6 ? ? ? PRD_000309 C5 C5 C 0 1 Y N N ? ? ? 8.589 -0.200 -1.957 PHQ 1 C5 polymer 1 1 7 ? ? ? PRD_000309 C6 C6 C 0 1 Y N N ? ? ? 8.956 -1.479 -1.583 PHQ 1 C6 polymer 1 1 8 ? ? ? PRD_000309 C7 C7 C 0 1 Y N N ? ? ? 8.296 -2.113 -0.547 PHQ 1 C7 polymer 1 1 9 ? ? ? PRD_000309 C8 C8 C 0 1 Y N N ? ? ? 7.271 -1.465 0.118 PHQ 1 C8 polymer 1 1 10 ? ? ? PRD_000309 N1 N1 N 0 1 N N N -2.522 8.622 -0.480 2.210 0.544 -0.234 LEU 2 N polymer 1 1 11 ? ? ? PRD_000309 C9 C9 C 0 1 N N S -2.973 7.825 0.655 1.003 1.145 0.340 LEU 2 CA polymer 1 1 12 ? ? ? PRD_000309 C10 C10 C 0 1 N N N -2.162 8.038 1.928 -0.196 0.306 -0.020 LEU 2 C polymer 1 1 13 ? ? ? PRD_000309 O3 O3 O 0 1 N N N -1.815 9.197 2.213 -0.056 -0.695 -0.691 LEU 2 O polymer 1 1 14 ? ? ? PRD_000309 C11 C11 C 0 1 N N N -3.044 6.359 0.317 0.823 2.559 -0.217 LEU 2 CB polymer 1 1 15 ? ? ? PRD_000309 C12 C12 C 0 1 N N N -4.214 5.575 0.869 1.979 3.444 0.253 LEU 2 CG polymer 1 1 16 ? ? ? PRD_000309 C13 C13 C 0 1 N N N -4.585 6.134 2.247 1.867 4.821 -0.403 LEU 2 CD1 polymer 1 1 17 ? ? ? PRD_000309 C14 C14 C 0 1 N N N -5.398 5.649 -0.105 1.918 3.597 1.774 LEU 2 CD2 polymer 1 1 18 ? ? ? PRD_000309 N2 N2 N 0 1 N N N -1.871 6.972 2.719 -1.423 0.669 0.402 PHE 3 N polymer 1 1 19 ? ? ? PRD_000309 C15 C15 C 0 1 N N S -1.480 7.160 4.122 -2.589 -0.147 0.052 PHE 3 CA polymer 1 1 20 ? ? ? PRD_000309 C16 C16 C 0 1 N N N -0.122 7.825 4.237 -3.827 0.711 0.076 PHE 3 C polymer 1 1 21 ? ? ? PRD_000309 O4 O4 O 0 1 N N N 0.842 7.190 3.809 -3.745 1.888 0.359 PHE 3 O polymer 1 1 22 ? ? ? PRD_000309 C17 C17 C 0 1 N N N -1.360 5.839 4.892 -2.737 -1.286 1.064 PHE 3 CB polymer 1 1 23 ? ? ? PRD_000309 C18 C18 C 0 1 Y N N -2.678 5.119 5.018 -1.554 -2.213 0.953 PHE 3 CG polymer 1 1 24 ? ? ? PRD_000309 C19 C19 C 0 1 Y N N -3.622 5.544 5.937 -0.426 -1.988 1.720 PHE 3 CD1 polymer 1 1 25 ? ? ? PRD_000309 C20 C20 C 0 1 Y N N -2.929 4.028 4.204 -1.599 -3.291 0.089 PHE 3 CD2 polymer 1 1 26 ? ? ? PRD_000309 C21 C21 C 0 1 Y N N -4.824 4.858 6.011 0.659 -2.839 1.618 PHE 3 CE1 polymer 1 1 27 ? ? ? PRD_000309 C22 C22 C 0 1 Y N N -4.137 3.343 4.277 -0.514 -4.141 -0.012 PHE 3 CE2 polymer 1 1 28 ? ? ? PRD_000309 C23 C23 C 0 1 Y N N -5.094 3.759 5.194 0.616 -3.914 0.751 PHE 3 CZ polymer 1 1 29 ? ? ? PRD_000309 N3 N3 N 0 1 N N N -0.037 9.053 4.806 -5.027 0.170 -0.215 GLY 4 N polymer 1 1 30 ? ? ? PRD_000309 C24 C24 C 0 1 N N N 1.210 9.836 5.013 -6.231 1.004 -0.192 GLY 4 CA polymer 1 1 31 ? ? ? PRD_000309 C25 C25 C 0 1 N N N 1.869 9.532 6.352 -7.430 0.166 -0.552 GLY 4 C polymer 1 1 32 ? ? ? PRD_000309 O5 O5 O 0 1 N N N 3.037 9.730 6.666 -7.292 -1.016 -0.804 GLY 4 O polymer 1 1 33 ? ? ? PRD_000309 C26 C26 C 0 1 N N N 1.038 8.863 7.428 -8.695 0.743 -0.596 0HQ 5 C1 polymer 1 1 34 ? ? ? PRD_000309 N4 N4 N 1 1 N Y N ? ? ? -9.689 0.047 -0.895 0HQ 5 N1 polymer 1 1 35 ? ? ? PRD_000309 N5 N5 N -1 1 N Y N ? ? ? -10.584 -0.579 -1.163 0HQ 5 N2 polymer 1 1 36 ? ? ? PRD_000309 H1 H1 H 0 1 N N N ? ? ? 5.958 1.591 0.448 PHQ 1 H21 polymer 1 1 37 ? ? ? PRD_000309 H2 H2 H 0 1 N N N ? ? ? 5.739 0.169 1.495 PHQ 1 H22 polymer 1 1 38 ? ? ? PRD_000309 H3 H3 H 0 1 N N N ? ? ? 7.275 1.445 -1.587 PHQ 1 H41 polymer 1 1 39 ? ? ? PRD_000309 H4 H4 H 0 1 N N N ? ? ? 9.105 0.295 -2.766 PHQ 1 H51 polymer 1 1 40 ? ? ? PRD_000309 H5 H5 H 0 1 N N N ? ? ? 9.759 -1.984 -2.101 PHQ 1 H61 polymer 1 1 41 ? ? ? PRD_000309 H6 H6 H 0 1 N N N ? ? ? 8.582 -3.112 -0.255 PHQ 1 H71 polymer 1 1 42 ? ? ? PRD_000309 H7 H7 H 0 1 N N N ? ? ? 6.758 -1.959 0.930 PHQ 1 H81 polymer 1 1 43 ? ? ? PRD_000309 H8 H8 H 0 1 N N N -2.505 9.497 -0.964 2.144 -0.023 -1.018 LEU 2 H polymer 1 1 44 ? ? ? PRD_000309 H9 H9 H 0 1 N N N -4.000 8.143 0.886 1.102 1.192 1.424 LEU 2 HA polymer 1 1 45 ? ? ? PRD_000309 H10 H10 H 0 1 N N N -3.077 6.274 -0.779 0.814 2.521 -1.306 LEU 2 HB2 polymer 1 1 46 ? ? ? PRD_000309 H11 H11 H 0 1 N N N -2.124 5.888 0.694 -0.120 2.972 0.140 LEU 2 HB3 polymer 1 1 47 ? ? ? PRD_000309 H12 H12 H 0 1 N N N -3.917 4.522 0.983 2.926 2.984 -0.027 LEU 2 HG polymer 1 1 48 ? ? ? PRD_000309 H13 H13 H 0 0 N N N -5.436 5.569 2.656 0.919 5.281 -0.123 LEU 2 HD11 polymer 1 1 49 ? ? ? PRD_000309 H14 H14 H 0 0 N N N -3.723 6.041 2.925 2.690 5.452 -0.068 LEU 2 HD12 polymer 1 1 50 ? ? ? PRD_000309 H15 H15 H 0 0 N N N -4.862 7.194 2.150 1.910 4.712 -1.487 LEU 2 HD13 polymer 1 1 51 ? ? ? PRD_000309 H16 H16 H 0 0 N N N -6.245 5.077 0.302 0.970 4.057 2.055 LEU 2 HD21 polymer 1 1 52 ? ? ? PRD_000309 H17 H17 H 0 0 N N N -5.696 6.699 -0.240 1.998 2.616 2.242 LEU 2 HD22 polymer 1 1 53 ? ? ? PRD_000309 H18 H18 H 0 0 N N N -5.102 5.224 -1.075 2.741 4.228 2.109 LEU 2 HD23 polymer 1 1 54 ? ? ? PRD_000309 H19 H19 H 0 1 N N N -1.924 6.048 2.341 -1.535 1.469 0.938 PHE 3 H polymer 1 1 55 ? ? ? PRD_000309 H20 H20 H 0 1 N N N -2.226 7.791 4.627 -2.454 -0.563 -0.946 PHE 3 HA polymer 1 1 56 ? ? ? PRD_000309 H21 H21 H 0 1 N N N -0.651 5.186 4.362 -2.782 -0.873 2.071 PHE 3 HB2 polymer 1 1 57 ? ? ? PRD_000309 H22 H22 H 0 1 N N N -0.978 6.053 5.901 -3.653 -1.839 0.856 PHE 3 HB3 polymer 1 1 58 ? ? ? PRD_000309 H23 H23 H 0 1 N N N -3.427 6.389 6.580 -0.392 -1.148 2.398 PHE 3 HD1 polymer 1 1 59 ? ? ? PRD_000309 H24 H24 H 0 1 N N N -2.175 3.704 3.502 -2.482 -3.469 -0.506 PHE 3 HD2 polymer 1 1 60 ? ? ? PRD_000309 H25 H25 H 0 1 N N N -5.572 5.182 6.720 1.541 -2.663 2.217 PHE 3 HE1 polymer 1 1 61 ? ? ? PRD_000309 H26 H26 H 0 1 N N N -4.328 2.500 3.630 -0.549 -4.984 -0.687 PHE 3 HE2 polymer 1 1 62 ? ? ? PRD_000309 H27 H27 H 0 1 N N N -6.037 3.238 5.274 1.464 -4.578 0.671 PHE 3 HZ polymer 1 1 63 ? ? ? PRD_000309 H28 H28 H 0 1 N N N -0.892 9.470 5.115 -5.093 -0.771 -0.441 GLY 4 H polymer 1 1 64 ? ? ? PRD_000309 H29 H29 H 0 1 N N N 1.918 9.593 4.207 -6.366 1.421 0.807 GLY 4 HA2 polymer 1 1 65 ? ? ? PRD_000309 H30 H30 H 0 1 N N N 0.965 10.908 4.975 -6.126 1.816 -0.912 GLY 4 HA3 polymer 1 1 66 ? ? ? PRD_000309 H31 H31 H 0 1 N Y N 0.699 9.101 8.425 -8.818 1.792 -0.372 0HQ 5 H1 polymer 1 1 67 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000309 C1 O1 DOUB N N 1 PRD_000309 C1 O2 SING N N 2 PRD_000309 O2 C2 SING N N 3 PRD_000309 C2 C3 SING N N 4 PRD_000309 C2 H1 SING N N 5 PRD_000309 C2 H2 SING N N 6 PRD_000309 C3 C4 DOUB Y N 7 PRD_000309 C3 C8 SING Y N 8 PRD_000309 C4 C5 SING Y N 9 PRD_000309 C4 H3 SING N N 10 PRD_000309 C5 C6 DOUB Y N 11 PRD_000309 C5 H4 SING N N 12 PRD_000309 C6 C7 SING Y N 13 PRD_000309 C6 H5 SING N N 14 PRD_000309 C7 C8 DOUB Y N 15 PRD_000309 C7 H6 SING N N 16 PRD_000309 C8 H7 SING N N 17 PRD_000309 N1 C9 SING N N 18 PRD_000309 N1 H8 SING N N 19 PRD_000309 C9 C10 SING N N 20 PRD_000309 C9 C11 SING N N 21 PRD_000309 C9 H9 SING N N 22 PRD_000309 C10 O3 DOUB N N 23 PRD_000309 C11 C12 SING N N 24 PRD_000309 C11 H10 SING N N 25 PRD_000309 C11 H11 SING N N 26 PRD_000309 C12 C13 SING N N 27 PRD_000309 C12 C14 SING N N 28 PRD_000309 C12 H12 SING N N 29 PRD_000309 C13 H13 SING N N 30 PRD_000309 C13 H14 SING N N 31 PRD_000309 C13 H15 SING N N 32 PRD_000309 C14 H16 SING N N 33 PRD_000309 C14 H17 SING N N 34 PRD_000309 C14 H18 SING N N 35 PRD_000309 N2 C15 SING N N 36 PRD_000309 N2 H19 SING N N 37 PRD_000309 C15 C16 SING N N 38 PRD_000309 C15 C17 SING N N 39 PRD_000309 C15 H20 SING N N 40 PRD_000309 C16 O4 DOUB N N 41 PRD_000309 C17 C18 SING N N 42 PRD_000309 C17 H21 SING N N 43 PRD_000309 C17 H22 SING N N 44 PRD_000309 C18 C19 DOUB Y N 45 PRD_000309 C18 C20 SING Y N 46 PRD_000309 C19 C21 SING Y N 47 PRD_000309 C19 H23 SING N N 48 PRD_000309 C20 C22 DOUB Y N 49 PRD_000309 C20 H24 SING N N 50 PRD_000309 C21 C23 DOUB Y N 51 PRD_000309 C21 H25 SING N N 52 PRD_000309 C22 C23 SING Y N 53 PRD_000309 C22 H26 SING N N 54 PRD_000309 C23 H27 SING N N 55 PRD_000309 N3 C24 SING N N 56 PRD_000309 N3 H28 SING N N 57 PRD_000309 C24 C25 SING N N 58 PRD_000309 C24 H29 SING N N 59 PRD_000309 C24 H30 SING N N 60 PRD_000309 C25 O5 DOUB N N 61 PRD_000309 C26 N4 DOUB N N 62 PRD_000309 N4 N5 DOUB N N 63 PRD_000309 C26 H31 SING N N 64 PRD_000309 C1 N1 SING N N 65 PRD_000309 C25 C26 SING N N 66 PRD_000309 C10 N2 SING N N 67 PRD_000309 C16 N3 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000309 SMILES ACDLabs 12.01 "[N-]=[N+]=C/C(=O)CNC(=O)C(NC(=O)C(NC(=O)OCc1ccccc1)CC(C)C)Cc2ccccc2" PRD_000309 InChI InChI 1.03 "InChI=1S/C26H31N5O5/c1-18(2)13-22(31-26(35)36-17-20-11-7-4-8-12-20)25(34)30-23(14-19-9-5-3-6-10-19)24(33)28-15-21(32)16-29-27/h3-12,16,18,22-23H,13-15,17H2,1-2H3,(H,28,33)(H,30,34)(H,31,35)/t22-,23-/m1/s1" PRD_000309 InChIKey InChI 1.03 IUGUNYFKCMJXBV-DHIUTWEWSA-N PRD_000309 SMILES_CANONICAL CACTVS 3.370 "CC(C)C[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@@H](Cc2ccccc2)C(=O)NCC(=O)C=[N+]=[N-]" PRD_000309 SMILES CACTVS 3.370 "CC(C)C[CH](NC(=O)OCc1ccccc1)C(=O)N[CH](Cc2ccccc2)C(=O)NCC(=O)C=[N+]=[N-]" PRD_000309 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)C[C@@H](C(=O)N[C@@H](Cc1ccccc1)C(=O)NCC(=O)C=[N+]=[N-])NC(=O)OCc2ccccc2" PRD_000309 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)CC(C(=O)NC(Cc1ccccc1)C(=O)NCC(=O)C=[N+]=[N-])NC(=O)OCc2ccccc2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000309 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-L-leucyl-N-(3-diazo-2-oxopropyl)-L-phenylalaninamide" PRD_000309 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(phenylmethyl) N-[(2S)-1-[[(2S)-1-[(3-diazo-2-oxidanylidene-propyl)amino]-1-oxidanylidene-3-phenyl-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate" #