data_PRDCC_000337 # _chem_comp.id PRD_000337 _chem_comp.name BENZYLOXYCARBONYL-LEUCINE-VALINE-GLYCINE-METHYLENE _chem_comp.formula "C22 H31 N5 O5" _chem_comp.formula_weight 445.512 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000337 C1 C1 C 0 1 N N N 28.231 43.188 40.592 3.473 0.396 0.337 PHQ 1 C1 polymer 1 1 1 ? ? ? PRD_000337 O1 O1 O 0 1 N N N 27.577 42.912 39.595 3.546 1.245 1.204 PHQ 1 O1 polymer 1 1 2 ? ? ? PRD_000337 O2 O2 O 0 1 N N N 28.646 42.216 41.499 4.586 -0.230 -0.089 PHQ 1 O2 polymer 1 1 3 ? ? ? PRD_000337 C2 C2 C 0 1 N N N 28.849 40.870 41.006 5.839 0.159 0.532 PHQ 1 C2 polymer 1 1 4 ? ? ? PRD_000337 C3 C3 C 0 1 Y N N 30.231 40.299 41.258 6.966 -0.642 -0.067 PHQ 1 C3 polymer 1 1 5 ? ? ? PRD_000337 C4 C4 C 0 1 Y N N 31.254 40.382 40.330 7.637 -0.167 -1.179 PHQ 1 C4 polymer 1 1 6 ? ? ? PRD_000337 C5 C5 C 0 1 Y N N 32.450 39.713 40.552 8.671 -0.902 -1.728 PHQ 1 C5 polymer 1 1 7 ? ? ? PRD_000337 C6 C6 C 0 1 Y N N 32.630 38.949 41.738 9.035 -2.111 -1.166 PHQ 1 C6 polymer 1 1 8 ? ? ? PRD_000337 C7 C7 C 0 1 Y N N 31.637 38.878 42.666 8.365 -2.585 -0.053 PHQ 1 C7 polymer 1 1 9 ? ? ? PRD_000337 C8 C8 C 0 1 Y N N 30.449 39.545 42.433 7.334 -1.849 0.499 PHQ 1 C8 polymer 1 1 10 ? ? ? PRD_000337 N1 N1 N 0 1 N N N 28.364 44.431 41.013 2.276 0.078 -0.195 LEU 2 N polymer 1 1 11 ? ? ? PRD_000337 C9 C9 C 0 1 N N S 27.900 45.565 40.217 1.063 0.756 0.273 LEU 2 CA polymer 1 1 12 ? ? ? PRD_000337 C10 C10 C 0 1 N N N 28.538 45.710 38.814 -0.132 -0.129 0.030 LEU 2 C polymer 1 1 13 ? ? ? PRD_000337 O3 O3 O 0 1 N N N 29.693 46.084 38.647 0.014 -1.219 -0.484 LEU 2 O polymer 1 1 14 ? ? ? PRD_000337 C11 C11 C 0 1 N N N 27.989 46.837 41.088 0.888 2.071 -0.489 LEU 2 CB polymer 1 1 15 ? ? ? PRD_000337 C12 C12 C 0 1 N N N 27.278 48.159 40.803 2.039 3.018 -0.144 LEU 2 CG polymer 1 1 16 ? ? ? PRD_000337 C13 C13 C 0 1 N N N 25.850 47.964 40.460 1.932 4.282 -0.998 LEU 2 CD1 polymer 1 1 17 ? ? ? PRD_000337 C14 C14 C 0 1 N N N 27.447 49.049 42.038 1.963 3.394 1.337 LEU 2 CD2 polymer 1 1 18 ? ? ? PRD_000337 N2 N2 N 0 1 N N N 27.726 45.434 37.807 -1.363 0.289 0.382 VAL 3 N polymer 1 1 19 ? ? ? PRD_000337 C15 C15 C 0 1 N N S 28.133 45.460 36.401 -2.525 -0.571 0.146 VAL 3 CA polymer 1 1 20 ? ? ? PRD_000337 C16 C16 C 0 1 N N N 27.106 46.213 35.531 -3.765 0.279 0.031 VAL 3 C polymer 1 1 21 ? ? ? PRD_000337 O4 O4 O 0 1 N N N 25.921 46.230 35.831 -3.685 1.485 0.137 VAL 3 O polymer 1 1 22 ? ? ? PRD_000337 C17 C17 C 0 1 N N N 28.279 44.002 35.825 -2.683 -1.548 1.313 VAL 3 CB polymer 1 1 23 ? ? ? PRD_000337 C18 C18 C 0 1 N N N 29.344 43.240 36.566 -1.425 -2.411 1.429 VAL 3 CG1 polymer 1 1 24 ? ? ? PRD_000337 C19 C19 C 0 1 N N N 26.961 43.245 35.936 -2.885 -0.763 2.611 VAL 3 CG2 polymer 1 1 25 ? ? ? PRD_000337 N3 N3 N 0 1 N N N 27.595 46.894 34.500 -4.961 -0.301 -0.189 GLY 4 N polymer 1 1 26 ? ? ? PRD_000337 C20 C20 C 0 1 N N N 26.736 47.606 33.578 -6.166 0.525 -0.300 GLY 4 CA polymer 1 1 27 ? ? ? PRD_000337 C21 C21 C 0 1 N N N 27.154 47.176 32.185 -7.361 -0.359 -0.543 GLY 4 C polymer 1 1 28 ? ? ? PRD_000337 O5 O5 O 0 1 N N N 28.307 47.362 31.809 -7.220 -1.565 -0.617 GLY 4 O polymer 1 1 29 ? ? ? PRD_000337 C22 C22 C 0 1 N N N 26.289 46.295 31.381 -8.625 0.203 -0.684 0HQ 5 C1 polymer 1 1 30 ? ? ? PRD_000337 N4 N4 N 1 1 N Y N ? ? ? -9.617 -0.531 -0.886 0HQ 5 N1 polymer 1 1 31 ? ? ? PRD_000337 N5 N5 N -1 1 N Y N ? ? ? -10.508 -1.191 -1.067 0HQ 5 N2 polymer 1 1 32 ? ? ? PRD_000337 H1 H1 H 0 1 N N N 28.114 40.213 41.494 6.016 1.221 0.360 PHQ 1 H21 polymer 1 1 33 ? ? ? PRD_000337 H2 H2 H 0 1 N N N 28.674 40.874 39.920 5.788 -0.031 1.604 PHQ 1 H22 polymer 1 1 34 ? ? ? PRD_000337 H3 H3 H 0 1 N N N 31.122 40.968 39.432 7.353 0.778 -1.618 PHQ 1 H41 polymer 1 1 35 ? ? ? PRD_000337 H4 H4 H 0 1 N N N 33.245 39.773 39.823 9.194 -0.531 -2.597 PHQ 1 H51 polymer 1 1 36 ? ? ? PRD_000337 H5 H5 H 0 1 N N N 33.559 38.423 41.903 9.842 -2.685 -1.595 PHQ 1 H61 polymer 1 1 37 ? ? ? PRD_000337 H6 H6 H 0 1 N N N 31.775 38.308 43.573 8.649 -3.530 0.386 PHQ 1 H71 polymer 1 1 38 ? ? ? PRD_000337 H7 H7 H 0 1 N N N 29.663 39.488 43.172 6.813 -2.217 1.370 PHQ 1 H81 polymer 1 1 39 ? ? ? PRD_000337 H8 H8 H 0 1 N N N 28.793 44.602 41.900 2.217 -0.599 -0.887 LEU 2 H polymer 1 1 40 ? ? ? PRD_000337 H9 H9 H 0 1 N N N 26.827 45.403 40.038 1.151 0.962 1.339 LEU 2 HA polymer 1 1 41 ? ? ? PRD_000337 H10 H10 H 0 1 N N N 27.644 46.530 42.086 0.889 1.873 -1.561 LEU 2 HB2 polymer 1 1 42 ? ? ? PRD_000337 H11 H11 H 0 1 N N N 29.060 47.086 41.131 -0.059 2.531 -0.206 LEU 2 HB3 polymer 1 1 43 ? ? ? PRD_000337 H12 H12 H 0 1 N N N 27.783 48.646 39.956 2.989 2.523 -0.345 LEU 2 HG polymer 1 1 44 ? ? ? PRD_000337 H13 H13 H 0 0 N N N 25.383 48.940 40.264 0.982 4.777 -0.797 LEU 2 HD11 polymer 1 1 45 ? ? ? PRD_000337 H14 H14 H 0 0 N N N 25.772 47.333 39.562 2.753 4.957 -0.752 LEU 2 HD12 polymer 1 1 46 ? ? ? PRD_000337 H15 H15 H 0 0 N N N 25.335 47.473 41.299 1.987 4.014 -2.053 LEU 2 HD13 polymer 1 1 47 ? ? ? PRD_000337 H16 H16 H 0 0 N N N 26.945 50.013 41.867 1.013 3.889 1.538 LEU 2 HD21 polymer 1 1 48 ? ? ? PRD_000337 H17 H17 H 0 0 N N N 26.999 48.553 42.912 2.039 2.493 1.946 LEU 2 HD22 polymer 1 1 49 ? ? ? PRD_000337 H18 H18 H 0 0 N N N 28.518 49.221 42.222 2.783 4.069 1.583 LEU 2 HD23 polymer 1 1 50 ? ? ? PRD_000337 H19 H19 H 0 1 N N N 26.779 45.194 38.018 -1.480 1.160 0.793 VAL 3 H polymer 1 1 51 ? ? ? PRD_000337 H20 H20 H 0 1 N N N 29.106 45.964 36.308 -2.381 -1.130 -0.779 VAL 3 HA polymer 1 1 52 ? ? ? PRD_000337 H21 H21 H 0 1 N N N 28.560 44.076 34.764 -3.547 -2.188 1.137 VAL 3 HB polymer 1 1 53 ? ? ? PRD_000337 H22 H22 H 0 0 N N N 29.429 42.226 36.148 -1.537 -3.106 2.261 VAL 3 HG11 polymer 1 1 54 ? ? ? PRD_000337 H23 H23 H 0 0 N N N 30.307 43.761 36.462 -1.281 -2.970 0.505 VAL 3 HG12 polymer 1 1 55 ? ? ? PRD_000337 H24 H24 H 0 0 N N N 29.075 43.176 37.631 -0.560 -1.770 1.605 VAL 3 HG13 polymer 1 1 56 ? ? ? PRD_000337 H25 H25 H 0 0 N N N 27.085 42.231 35.529 -3.781 -0.148 2.528 VAL 3 HG21 polymer 1 1 57 ? ? ? PRD_000337 H26 H26 H 0 0 N N N 26.662 43.182 36.993 -2.997 -1.459 3.442 VAL 3 HG22 polymer 1 1 58 ? ? ? PRD_000337 H27 H27 H 0 0 N N N 26.184 43.776 35.367 -2.020 -0.123 2.787 VAL 3 HG23 polymer 1 1 59 ? ? ? PRD_000337 H28 H28 H 0 1 N N N 28.585 46.915 34.357 -5.025 -1.265 -0.273 GLY 4 H polymer 1 1 60 ? ? ? PRD_000337 H29 H29 H 0 1 N N N 25.683 47.342 33.758 -6.310 1.084 0.625 GLY 4 HA2 polymer 1 1 61 ? ? ? PRD_000337 H30 H30 H 0 1 N N N 26.867 48.692 33.697 -6.054 1.221 -1.131 GLY 4 HA3 polymer 1 1 62 ? ? ? PRD_000337 H31 H31 H 0 1 N Y N 25.511 47.022 31.199 -8.751 1.273 -0.619 0HQ 5 H1 polymer 1 1 63 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000337 C1 O1 DOUB N N 1 PRD_000337 C1 O2 SING N N 2 PRD_000337 O2 C2 SING N N 3 PRD_000337 C2 C3 SING N N 4 PRD_000337 C2 H1 SING N N 5 PRD_000337 C2 H2 SING N N 6 PRD_000337 C3 C4 DOUB Y N 7 PRD_000337 C3 C8 SING Y N 8 PRD_000337 C4 C5 SING Y N 9 PRD_000337 C4 H3 SING N N 10 PRD_000337 C5 C6 DOUB Y N 11 PRD_000337 C5 H4 SING N N 12 PRD_000337 C6 C7 SING Y N 13 PRD_000337 C6 H5 SING N N 14 PRD_000337 C7 C8 DOUB Y N 15 PRD_000337 C7 H6 SING N N 16 PRD_000337 C8 H7 SING N N 17 PRD_000337 N1 C9 SING N N 18 PRD_000337 N1 H8 SING N N 19 PRD_000337 C9 C10 SING N N 20 PRD_000337 C9 C11 SING N N 21 PRD_000337 C9 H9 SING N N 22 PRD_000337 C10 O3 DOUB N N 23 PRD_000337 C11 C12 SING N N 24 PRD_000337 C11 H10 SING N N 25 PRD_000337 C11 H11 SING N N 26 PRD_000337 C12 C13 SING N N 27 PRD_000337 C12 C14 SING N N 28 PRD_000337 C12 H12 SING N N 29 PRD_000337 C13 H13 SING N N 30 PRD_000337 C13 H14 SING N N 31 PRD_000337 C13 H15 SING N N 32 PRD_000337 C14 H16 SING N N 33 PRD_000337 C14 H17 SING N N 34 PRD_000337 C14 H18 SING N N 35 PRD_000337 N2 C15 SING N N 36 PRD_000337 N2 H19 SING N N 37 PRD_000337 C15 C16 SING N N 38 PRD_000337 C15 C17 SING N N 39 PRD_000337 C15 H20 SING N N 40 PRD_000337 C16 O4 DOUB N N 41 PRD_000337 C17 C18 SING N N 42 PRD_000337 C17 C19 SING N N 43 PRD_000337 C17 H21 SING N N 44 PRD_000337 C18 H22 SING N N 45 PRD_000337 C18 H23 SING N N 46 PRD_000337 C18 H24 SING N N 47 PRD_000337 C19 H25 SING N N 48 PRD_000337 C19 H26 SING N N 49 PRD_000337 C19 H27 SING N N 50 PRD_000337 N3 C20 SING N N 51 PRD_000337 N3 H28 SING N N 52 PRD_000337 C20 C21 SING N N 53 PRD_000337 C20 H29 SING N N 54 PRD_000337 C20 H30 SING N N 55 PRD_000337 C21 O5 DOUB N N 56 PRD_000337 C22 N4 DOUB N N 57 PRD_000337 N4 N5 DOUB N N 58 PRD_000337 C22 H31 SING N N 59 PRD_000337 C1 N1 SING N N 60 PRD_000337 C21 C22 SING N N 61 PRD_000337 C10 N2 SING N N 62 PRD_000337 C16 N3 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000337 SMILES ACDLabs 12.01 "[N-]=[N+]=C/C(=O)CNC(=O)C(NC(=O)C(NC(=O)OCc1ccccc1)CC(C)C)C(C)C" PRD_000337 InChI InChI 1.03 "InChI=1S/C22H31N5O5/c1-14(2)10-18(26-22(31)32-13-16-8-6-5-7-9-16)20(29)27-19(15(3)4)21(30)24-11-17(28)12-25-23/h5-9,12,14-15,18-19H,10-11,13H2,1-4H3,(H,24,30)(H,26,31)(H,27,29)" PRD_000337 InChIKey InChI 1.03 KRMMQWXJLDORCJ-UHFFFAOYSA-N PRD_000337 SMILES_CANONICAL CACTVS 3.370 "CC(C)C[C@H](NC(=O)OCc1ccccc1)C(=O)N[C@@H](C(C)C)C(=O)NCC(=O)C=[N+]=[N-]" PRD_000337 SMILES CACTVS 3.370 "CC(C)C[CH](NC(=O)OCc1ccccc1)C(=O)N[CH](C(C)C)C(=O)NCC(=O)C=[N+]=[N-]" PRD_000337 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)C[C@@H](C(=O)N[C@@H](C(C)C)C(=O)NCC(=O)C=[N+]=[N-])NC(=O)OCc1ccccc1" PRD_000337 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)CC(C(=O)NC(C(C)C)C(=O)NCC(=O)C=[N+]=[N-])NC(=O)OCc1ccccc1" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000337 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-L-leucyl-N-(3-diazo-2-oxopropyl)-L-valinamide" PRD_000337 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(phenylmethyl) N-[(2S)-1-[[(2S)-1-[(3-diazo-2-oxidanylidene-propyl)amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate" #