data_PRDCC_000431 # _chem_comp.id PRD_000431 _chem_comp.name "CASPASE-7 INHIBITOR AC-DMQD-CHO" _chem_comp.formula "C20 H33 N5 O10 S" _chem_comp.formula_weight 535.569 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000431 C1 C1 C 0 1 N N N 22.402 14.203 45.860 6.523 -0.711 -0.228 ACE 1 C polymer 1 1 1 ? ? ? PRD_000431 O1 O1 O 0 1 N N N 22.393 13.001 45.576 6.162 -1.579 0.538 ACE 1 O polymer 1 1 2 ? ? ? PRD_000431 C2 C2 C 0 1 N N N 22.615 14.646 47.293 7.712 -0.942 -1.125 ACE 1 CH3 polymer 1 1 3 ? ? ? PRD_000431 N1 N1 N 0 1 N N N 22.236 15.171 44.972 5.856 0.460 -0.282 ASP 2 N polymer 1 1 4 ? ? ? PRD_000431 C3 C3 C 0 1 N N S 21.931 14.955 43.561 4.634 0.644 0.505 ASP 2 CA polymer 1 1 5 ? ? ? PRD_000431 C4 C4 C 0 1 N N N 23.189 14.577 42.797 3.468 0.030 -0.226 ASP 2 C polymer 1 1 6 ? ? ? PRD_000431 O2 O2 O 0 1 N N N 24.186 15.303 42.784 3.641 -0.508 -1.299 ASP 2 O polymer 1 1 7 ? ? ? PRD_000431 C5 C5 C 0 1 N N N 21.291 16.197 42.943 4.379 2.139 0.708 ASP 2 CB polymer 1 1 8 ? ? ? PRD_000431 C6 C6 C 0 1 N N N 19.882 16.522 43.383 5.477 2.725 1.558 ASP 2 CG polymer 1 1 9 ? ? ? PRD_000431 O3 O3 O 0 1 N N N 19.093 15.626 43.770 6.317 2.003 2.043 ASP 2 OD1 polymer 1 1 10 ? ? ? PRD_000431 O4 O4 O 0 1 N N N 19.512 17.722 43.341 5.523 4.048 1.776 ASP 2 OD2 polymer 1 1 11 ? ? ? PRD_000431 N2 N2 N 0 1 N N N 23.207 13.422 42.135 2.234 0.079 0.312 MET 3 N polymer 1 1 12 ? ? ? PRD_000431 C7 C7 C 0 1 N N S 24.402 13.024 41.392 1.100 -0.517 -0.398 MET 3 CA polymer 1 1 13 ? ? ? PRD_000431 C8 C8 C 0 1 N N N 23.992 12.633 39.974 -0.176 0.158 0.035 MET 3 C polymer 1 1 14 ? ? ? PRD_000431 O5 O5 O 0 1 N N N 22.783 12.618 39.735 -0.141 1.049 0.856 MET 3 O polymer 1 1 15 ? ? ? PRD_000431 C9 C9 C 0 1 N N N 25.094 11.851 42.079 1.023 -2.010 -0.073 MET 3 CB polymer 1 1 16 ? ? ? PRD_000431 C10 C10 C 0 1 N N N 25.331 12.098 43.567 2.263 -2.717 -0.623 MET 3 CG polymer 1 1 17 ? ? ? PRD_000431 S1 S1 S 0 1 N N N 25.994 10.660 44.426 2.172 -4.487 -0.238 MET 3 SD polymer 1 1 18 ? ? ? PRD_000431 C11 C11 C 0 1 N N N 27.755 10.932 44.201 3.702 -5.142 -0.959 MET 3 CE polymer 1 1 19 ? ? ? PRD_000431 N3 N3 N 0 1 N N N 24.934 12.307 39.118 -1.355 -0.229 -0.491 GLN 4 N polymer 1 1 20 ? ? ? PRD_000431 C12 C12 C 0 1 N N S 24.648 11.979 37.729 -2.595 0.427 -0.070 GLN 4 CA polymer 1 1 21 ? ? ? PRD_000431 C13 C13 C 0 1 N N N 24.935 10.509 37.433 -3.756 -0.512 -0.278 GLN 4 C polymer 1 1 22 ? ? ? PRD_000431 O6 O6 O 0 1 N N N 25.929 9.963 37.922 -3.566 -1.619 -0.734 GLN 4 O polymer 1 1 23 ? ? ? PRD_000431 C14 C14 C 0 1 N N N 25.485 12.832 36.769 -2.809 1.694 -0.900 GLN 4 CB polymer 1 1 24 ? ? ? PRD_000431 C15 C15 C 0 1 N N N 25.292 14.328 36.908 -1.695 2.698 -0.593 GLN 4 CG polymer 1 1 25 ? ? ? PRD_000431 C16 C16 C 0 1 N N N 26.231 14.967 37.917 -1.906 3.947 -1.411 GLN 4 CD polymer 1 1 26 ? ? ? PRD_000431 O7 O7 O 0 1 N N N 27.424 14.683 37.970 -2.852 4.026 -2.164 GLN 4 OE1 polymer 1 1 27 ? ? ? PRD_000431 N4 N4 N 0 1 N N N 25.689 15.856 38.739 -1.041 4.975 -1.304 GLN 4 NE2 polymer 1 1 28 ? ? ? PRD_000431 C17 C17 C 0 1 N N N 24.595 8.514 34.673 -6.626 -0.921 -1.606 ASJ 5 C polymer 1 1 29 ? ? ? PRD_000431 N5 N5 N 0 1 N N N 24.072 9.911 36.626 -5.005 -0.120 0.041 ASJ 5 N polymer 1 1 30 ? ? ? PRD_000431 O8 O8 O 0 1 N N N 25.281 7.456 34.089 -7.153 0.388 -1.831 ASJ 5 O polymer 1 1 31 ? ? ? PRD_000431 C18 C18 C 0 1 N N S 24.215 8.553 36.121 -6.133 -1.032 -0.162 ASJ 5 CA polymer 1 1 32 ? ? ? PRD_000431 C19 C19 C 0 1 N N N 22.882 7.803 36.259 -7.269 -0.659 0.794 ASJ 5 CB polymer 1 1 33 ? ? ? PRD_000431 C20 C20 C 0 1 N N N 22.716 7.077 37.568 -6.823 -0.886 2.216 ASJ 5 CG polymer 1 1 34 ? ? ? PRD_000431 O9 O9 O 0 1 N N N 23.743 6.827 38.235 -7.661 -0.625 3.231 ASJ 5 OD1 polymer 1 1 35 ? ? ? PRD_000431 O10 O10 O 0 1 N N N 21.559 6.769 37.915 -5.712 -1.303 2.441 ASJ 5 OD2 polymer 1 1 36 ? ? ? PRD_000431 H1 H1 H 0 1 N N N 22.743 13.762 47.935 8.114 -1.939 -0.944 ACE 1 H1 polymer 1 1 37 ? ? ? PRD_000431 H2 H2 H 0 1 N N N 23.515 15.275 47.352 7.403 -0.859 -2.167 ACE 1 H2 polymer 1 1 38 ? ? ? PRD_000431 H3 H3 H 0 1 N N N 21.742 15.222 47.632 8.478 -0.197 -0.912 ACE 1 H3 polymer 1 1 39 ? ? ? PRD_000431 H4 H4 H 0 1 N N N 22.326 16.115 45.290 6.185 1.180 -0.843 ASP 2 H polymer 1 1 40 ? ? ? PRD_000431 H5 H5 H 0 1 N N N 21.215 14.124 43.474 4.751 0.160 1.475 ASP 2 HA polymer 1 1 41 ? ? ? PRD_000431 H6 H6 H 0 1 N N N 21.926 17.059 43.193 4.362 2.639 -0.260 ASP 2 HB2 polymer 1 1 42 ? ? ? PRD_000431 H7 H7 H 0 1 N N N 21.276 16.057 41.852 3.420 2.279 1.207 ASP 2 HB3 polymer 1 1 43 ? ? ? PRD_000431 H8 H8 H 0 1 N N N 18.610 17.786 43.633 6.246 4.378 2.327 ASP 2 HD2 polymer 1 1 44 ? ? ? PRD_000431 H9 H9 H 0 1 N N N 22.404 12.827 42.146 2.096 0.510 1.171 MET 3 H polymer 1 1 45 ? ? ? PRD_000431 H10 H10 H 0 1 N N N 25.104 13.869 41.338 1.235 -0.386 -1.472 MET 3 HA polymer 1 1 46 ? ? ? PRD_000431 H11 H11 H 0 1 N N N 24.465 10.956 41.966 0.978 -2.145 1.008 MET 3 HB2 polymer 1 1 47 ? ? ? PRD_000431 H12 H12 H 0 1 N N N 26.065 11.680 41.591 0.129 -2.436 -0.530 MET 3 HB3 polymer 1 1 48 ? ? ? PRD_000431 H13 H13 H 0 1 N N N 26.043 12.929 43.675 2.308 -2.582 -1.704 MET 3 HG2 polymer 1 1 49 ? ? ? PRD_000431 H14 H14 H 0 1 N N N 24.373 12.373 44.033 3.157 -2.291 -0.167 MET 3 HG3 polymer 1 1 50 ? ? ? PRD_000431 H15 H15 H 0 1 N N N 28.317 10.117 44.681 3.711 -4.946 -2.031 MET 3 HE1 polymer 1 1 51 ? ? ? PRD_000431 H16 H16 H 0 1 N N N 27.988 10.954 43.126 4.560 -4.655 -0.494 MET 3 HE2 polymer 1 1 52 ? ? ? PRD_000431 H17 H17 H 0 1 N N N 28.039 11.892 44.657 3.756 -6.216 -0.785 MET 3 HE3 polymer 1 1 53 ? ? ? PRD_000431 H18 H18 H 0 1 N N N 25.883 12.283 39.433 -1.382 -0.943 -1.148 GLN 4 H polymer 1 1 54 ? ? ? PRD_000431 H19 H19 H 0 1 N N N 23.585 12.172 37.523 -2.527 0.691 0.986 GLN 4 HA polymer 1 1 55 ? ? ? PRD_000431 H20 H20 H 0 1 N N N 26.546 12.607 36.949 -2.789 1.442 -1.960 GLN 4 HB2 polymer 1 1 56 ? ? ? PRD_000431 H21 H21 H 0 1 N N N 25.219 12.548 35.740 -3.774 2.134 -0.649 GLN 4 HB3 polymer 1 1 57 ? ? ? PRD_000431 H22 H22 H 0 1 N N N 25.465 14.794 35.927 -1.715 2.950 0.467 GLN 4 HG2 polymer 1 1 58 ? ? ? PRD_000431 H23 H23 H 0 1 N N N 24.256 14.518 37.227 -0.730 2.258 -0.844 GLN 4 HG3 polymer 1 1 59 ? ? ? PRD_000431 H24 H24 H 0 0 N N N 26.255 16.314 39.424 -0.284 4.912 -0.701 GLN 4 HE21 polymer 1 1 60 ? ? ? PRD_000431 H25 H25 H 0 0 N N N 24.714 16.068 38.674 -1.176 5.779 -1.830 GLN 4 HE22 polymer 1 1 61 ? ? ? PRD_000431 H26 H26 H 0 1 N N N 25.215 9.406 34.501 -7.405 -1.662 -1.782 ASJ 5 H3 polymer 1 1 62 ? ? ? PRD_000431 H27 H27 H 0 1 N Y N 23.653 8.608 34.112 -5.794 -1.100 -2.288 ASJ 5 HAA polymer 1 1 63 ? ? ? PRD_000431 H28 H28 H 0 1 N N N 23.265 10.429 36.343 -5.157 0.766 0.405 ASJ 5 H polymer 1 1 64 ? ? ? PRD_000431 H29 H29 H 0 1 N N N 25.418 7.637 33.167 -7.484 0.530 -2.728 ASJ 5 HO polymer 1 1 65 ? ? ? PRD_000431 H30 H30 H 0 1 N N N 24.978 8.020 36.707 -5.813 -2.055 0.036 ASJ 5 HA polymer 1 1 66 ? ? ? PRD_000431 H31 H31 H 0 1 N N N 22.064 8.532 36.163 -7.529 0.390 0.658 ASJ 5 HB polymer 1 1 67 ? ? ? PRD_000431 H32 H32 H 0 1 N N N 22.814 7.066 35.445 -8.140 -1.280 0.583 ASJ 5 HBA polymer 1 1 68 ? ? ? PRD_000431 H33 H33 H 0 0 N N N 23.500 6.373 39.033 -7.331 -0.786 4.126 ASJ 5 HOD1 polymer 1 1 69 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000431 C1 O1 DOUB N N 1 PRD_000431 C1 C2 SING N N 2 PRD_000431 C2 H1 SING N N 3 PRD_000431 C2 H2 SING N N 4 PRD_000431 C2 H3 SING N N 5 PRD_000431 N1 C3 SING N N 6 PRD_000431 N1 H4 SING N N 7 PRD_000431 C3 C4 SING N N 8 PRD_000431 C3 C5 SING N N 9 PRD_000431 C3 H5 SING N N 10 PRD_000431 C4 O2 DOUB N N 11 PRD_000431 C5 C6 SING N N 12 PRD_000431 C5 H6 SING N N 13 PRD_000431 C5 H7 SING N N 14 PRD_000431 C6 O3 DOUB N N 15 PRD_000431 C6 O4 SING N N 16 PRD_000431 O4 H8 SING N N 17 PRD_000431 N2 C7 SING N N 18 PRD_000431 N2 H9 SING N N 19 PRD_000431 C7 C8 SING N N 20 PRD_000431 C7 C9 SING N N 21 PRD_000431 C7 H10 SING N N 22 PRD_000431 C8 O5 DOUB N N 23 PRD_000431 C9 C10 SING N N 24 PRD_000431 C9 H11 SING N N 25 PRD_000431 C9 H12 SING N N 26 PRD_000431 C10 S1 SING N N 27 PRD_000431 C10 H13 SING N N 28 PRD_000431 C10 H14 SING N N 29 PRD_000431 S1 C11 SING N N 30 PRD_000431 C11 H15 SING N N 31 PRD_000431 C11 H16 SING N N 32 PRD_000431 C11 H17 SING N N 33 PRD_000431 N3 C12 SING N N 34 PRD_000431 N3 H18 SING N N 35 PRD_000431 C12 C13 SING N N 36 PRD_000431 C12 C14 SING N N 37 PRD_000431 C12 H19 SING N N 38 PRD_000431 C13 O6 DOUB N N 39 PRD_000431 C14 C15 SING N N 40 PRD_000431 C14 H20 SING N N 41 PRD_000431 C14 H21 SING N N 42 PRD_000431 C15 C16 SING N N 43 PRD_000431 C15 H22 SING N N 44 PRD_000431 C15 H23 SING N N 45 PRD_000431 C16 O7 DOUB N N 46 PRD_000431 C16 N4 SING N N 47 PRD_000431 N4 H24 SING N N 48 PRD_000431 N4 H25 SING N N 49 PRD_000431 C17 O8 SING N N 50 PRD_000431 C17 C18 SING N N 51 PRD_000431 C17 H26 SING N N 52 PRD_000431 C17 H27 SING N N 53 PRD_000431 C18 N5 SING N N 54 PRD_000431 N5 H28 SING N N 55 PRD_000431 O8 H29 SING N N 56 PRD_000431 C19 C18 SING N N 57 PRD_000431 C18 H30 SING N N 58 PRD_000431 C19 C20 SING N N 59 PRD_000431 C19 H31 SING N N 60 PRD_000431 C19 H32 SING N N 61 PRD_000431 C20 O10 DOUB N N 62 PRD_000431 C20 O9 SING N N 63 PRD_000431 O9 H33 SING N N 64 PRD_000431 C1 N1 SING N N 65 PRD_000431 N5 C13 SING N N 66 PRD_000431 C4 N2 SING N N 67 PRD_000431 C8 N3 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000431 SMILES ACDLabs 12.01 "O=C(NC(C(=O)NC(C(=O)NC(CC(=O)O)CO)CCC(=O)N)CCSC)C(NC(=O)C)CC(=O)O" PRD_000431 InChI InChI 1.03 "InChI=1S/C20H33N5O10S/c1-10(27)22-14(8-17(31)32)20(35)25-13(5-6-36-2)19(34)24-12(3-4-15(21)28)18(33)23-11(9-26)7-16(29)30/h11-14,26H,3-9H2,1-2H3,(H2,21,28)(H,22,27)(H,23,33)(H,24,34)(H,25,35)(H,29,30)(H,31,32)/t11-,12+,13?,14?/m1/s1" PRD_000431 InChIKey InChI 1.03 SQVILVRSJQSDOT-KBHBFKLGSA-N PRD_000431 SMILES_CANONICAL CACTVS 3.370 "CSCC[C@H](NC(=O)[C@H](CC(O)=O)NC(C)=O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@H](CO)CC(O)=O" PRD_000431 SMILES CACTVS 3.370 "CSCC[CH](NC(=O)[CH](CC(O)=O)NC(C)=O)C(=O)N[CH](CCC(N)=O)C(=O)N[CH](CO)CC(O)=O" PRD_000431 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(=O)N[C@@H](CC(=O)O)C(=O)N[C@@H](CCSC)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CC(=O)O)CO" PRD_000431 SMILES "OpenEye OEToolkits" 1.7.6 "CC(=O)NC(CC(=O)O)C(=O)NC(CCSC)C(=O)NC(CCC(=O)N)C(=O)NC(CC(=O)O)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000431 "SYSTEMATIC NAME" ACDLabs 12.01 "N-acetyl-L-alpha-aspartyl-L-methionyl-N~1~-[(2R)-1-carboxy-3-hydroxypropan-2-yl]-L-glutamamide" PRD_000431 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(3S)-3-acetamido-4-[[(2S)-1-[[(2S)-5-azanyl-1-[[(2S)-1,4-bis(oxidanyl)-4-oxidanylidene-butan-2-yl]amino]-1,5-bis(oxidanylidene)pentan-2-yl]amino]-4-methylsulfanyl-1-oxidanylidene-butan-2-yl]amino]-4-oxidanylidene-butanoic acid" #