data_PRDCC_000910 # _chem_comp.id PRD_000910 _chem_comp.name "B4Z inhibitor" _chem_comp.formula "C24 H44 N6 O6" _chem_comp.formula_weight 512.643 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_000910 O1 O1 O 0 1 N N N 0.072 -20.513 36.971 6.977 -0.396 1.469 BOC 1 O1 polymer 1 1 1 ? ? ? PRD_000910 C1 C1 C 0 1 N N N -1.126 -20.721 37.125 6.909 0.019 0.329 BOC 1 C polymer 1 1 2 ? ? ? PRD_000910 O2 O2 O 0 1 N N N -1.602 -22.070 37.374 8.030 0.178 -0.399 BOC 1 O2 polymer 1 1 3 ? ? ? PRD_000910 C2 C2 C 0 1 N N N -0.835 -22.994 38.151 9.286 -0.165 0.243 BOC 1 CT polymer 1 1 4 ? ? ? PRD_000910 C3 C3 C 0 1 N N N -1.780 -24.087 38.639 9.265 -1.641 0.648 BOC 1 C1 polymer 1 1 5 ? ? ? PRD_000910 C4 C4 C 0 1 N N N 0.264 -23.591 37.271 10.441 0.079 -0.731 BOC 1 C2 polymer 1 1 6 ? ? ? PRD_000910 C5 C5 C 0 1 N N N -0.258 -22.275 39.369 9.477 0.703 1.489 BOC 1 C3 polymer 1 1 7 ? ? ? PRD_000910 N1 N1 N 0 1 N N N -2.039 -19.759 37.060 5.709 0.315 -0.210 ALA 2 N polymer 1 1 8 ? ? ? PRD_000910 C6 C6 C 0 1 N N S -1.659 -18.380 36.847 4.488 0.136 0.580 ALA 2 CA polymer 1 1 9 ? ? ? PRD_000910 C7 C7 C 0 1 N N N -0.955 -17.894 38.080 3.317 -0.072 -0.346 ALA 2 C polymer 1 1 10 ? ? ? PRD_000910 O3 O3 O 0 1 N N N -1.325 -18.242 39.195 3.486 -0.071 -1.547 ALA 2 O polymer 1 1 11 ? ? ? PRD_000910 C8 C8 C 0 1 N N N -2.913 -17.546 36.600 4.246 1.381 1.436 ALA 2 CB polymer 1 1 12 ? ? ? PRD_000910 N2 N2 N 0 1 N N N 0.070 -17.079 37.883 2.082 -0.259 0.161 VAL 3 N polymer 1 1 13 ? ? ? PRD_000910 C9 C9 C 0 1 N N S 0.840 -16.531 38.983 0.944 -0.461 -0.740 VAL 3 CA polymer 1 1 14 ? ? ? PRD_000910 C10 C10 C 0 1 N N N 0.612 -15.048 39.102 -0.326 -0.042 -0.045 VAL 3 C polymer 1 1 15 ? ? ? PRD_000910 O4 O4 O 0 1 N N N 0.753 -14.326 38.125 -0.361 0.028 1.165 VAL 3 O polymer 1 1 16 ? ? ? PRD_000910 C11 C11 C 0 1 N N N 2.272 -16.827 38.536 0.852 -1.940 -1.122 VAL 3 CB polymer 1 1 17 ? ? ? PRD_000910 C12 C12 C 0 1 N N N 3.320 -15.999 39.277 -0.276 -2.136 -2.136 VAL 3 CG1 polymer 1 1 18 ? ? ? PRD_000910 C13 C13 C 0 1 N N N 2.554 -18.323 38.657 2.177 -2.391 -1.740 VAL 3 CG2 polymer 1 1 19 ? ? ? PRD_000910 N3 N3 N 0 1 N N N 0.245 -14.583 40.295 -1.423 0.255 -0.769 LEU 4 N polymer 1 1 20 ? ? ? PRD_000910 C14 C14 C 0 1 N N S 0.016 -13.166 40.522 -2.622 0.770 -0.104 LEU 4 CA polymer 1 1 21 ? ? ? PRD_000910 C15 C15 C 0 1 N N N 1.354 -12.492 40.406 -3.843 0.388 -0.901 LEU 4 C polymer 1 1 22 ? ? ? PRD_000910 O5 O5 O 0 1 N N N 2.218 -12.672 41.255 -3.734 0.091 -2.072 LEU 4 O polymer 1 1 23 ? ? ? PRD_000910 C16 C16 C 0 1 N N N -0.505 -13.040 41.955 -2.535 2.295 -0.004 LEU 4 CB polymer 1 1 24 ? ? ? PRD_000910 C17 C17 C 0 1 N N N -1.892 -13.658 42.160 -3.745 2.825 0.768 LEU 4 CG polymer 1 1 25 ? ? ? PRD_000910 C18 C18 C 0 1 N N N -2.469 -13.326 43.537 -3.670 2.351 2.221 LEU 4 CD1 polymer 1 1 26 ? ? ? PRD_000910 C19 C19 C 0 1 N N N -2.856 -13.260 41.046 -3.744 4.354 0.730 LEU 4 CD2 polymer 1 1 27 ? ? ? PRD_000910 C20 C20 C 0 1 N N N 2.905 -9.592 39.426 -6.790 1.061 -1.866 0JU 5 C polymer 1 1 28 ? ? ? PRD_000910 N4 N4 N 0 1 N N N 3.924 -9.171 40.034 -6.233 2.212 -1.816 0JU 5 NF polymer 1 1 29 ? ? ? PRD_000910 C21 C21 C 0 1 N N S 2.856 -11.065 39.149 -6.228 -0.083 -1.062 0JU 5 CA polymer 1 1 30 ? ? ? PRD_000910 N5 N5 N 0 1 N N N 1.562 -11.722 39.343 -5.055 0.376 -0.313 0JU 5 N polymer 1 1 31 ? ? ? PRD_000910 C22 C22 C 0 1 N N N 3.177 -11.295 37.677 -7.291 -0.590 -0.085 0JU 5 CB polymer 1 1 32 ? ? ? PRD_000910 C23 C23 C 0 1 N N N 4.666 -11.487 37.445 -6.765 -1.829 0.642 0JU 5 CG polymer 1 1 33 ? ? ? PRD_000910 C24 C24 C 0 1 N N N 4.838 -11.861 35.993 -7.812 -2.328 1.605 0JU 5 CD polymer 1 1 34 ? ? ? PRD_000910 O6 O6 O 0 1 N N N 4.071 -11.428 35.140 -8.874 -1.750 1.699 0JU 5 OE polymer 1 1 35 ? ? ? PRD_000910 N6 N6 N 0 1 N N N 5.841 -12.672 35.718 -7.568 -3.417 2.360 0JU 5 NE polymer 1 1 36 ? ? ? PRD_000910 H1 H1 H 0 1 N N N -1.218 -24.816 39.242 9.129 -2.259 -0.239 BOC 1 H11 polymer 1 1 37 ? ? ? PRD_000910 H2 H2 H 0 1 N N N -2.574 -23.638 39.253 10.208 -1.899 1.130 BOC 1 H12 polymer 1 1 38 ? ? ? PRD_000910 H3 H3 H 0 1 N N N -2.230 -24.596 37.774 8.443 -1.815 1.342 BOC 1 H13 polymer 1 1 39 ? ? ? PRD_000910 H4 H4 H 0 1 N N N 0.860 -24.304 37.860 10.456 1.130 -1.019 BOC 1 H21 polymer 1 1 40 ? ? ? PRD_000910 H5 H5 H 0 1 N N N -0.193 -24.113 36.418 11.384 -0.179 -0.249 BOC 1 H22 polymer 1 1 41 ? ? ? PRD_000910 H6 H6 H 0 1 N N N 0.916 -22.786 36.902 10.305 -0.539 -1.618 BOC 1 H23 polymer 1 1 42 ? ? ? PRD_000910 H7 H7 H 0 1 N N N 0.332 -22.984 39.968 8.655 0.528 2.182 BOC 1 H31 polymer 1 1 43 ? ? ? PRD_000910 H8 H8 H 0 1 N N N 0.388 -21.450 39.035 10.420 0.445 1.970 BOC 1 H32 polymer 1 1 44 ? ? ? PRD_000910 H9 H9 H 0 1 N N N -1.079 -21.873 39.981 9.493 1.754 1.200 BOC 1 H33 polymer 1 1 45 ? ? ? PRD_000910 H10 H10 H 0 1 N N N -3.006 -19.992 37.160 5.654 0.646 -1.120 ALA 2 H polymer 1 1 46 ? ? ? PRD_000910 H11 H11 H 0 1 N N N -0.988 -18.295 35.979 4.598 -0.734 1.227 ALA 2 HA polymer 1 1 47 ? ? ? PRD_000910 H12 H12 H 0 1 N N N -2.629 -16.496 36.437 3.338 1.248 2.023 ALA 2 HB1 polymer 1 1 48 ? ? ? PRD_000910 H13 H13 H 0 1 N N N -3.437 -17.926 35.711 5.093 1.531 2.105 ALA 2 HB2 polymer 1 1 49 ? ? ? PRD_000910 H14 H14 H 0 1 N N N -3.577 -17.615 37.474 4.136 2.251 0.788 ALA 2 HB3 polymer 1 1 50 ? ? ? PRD_000910 H15 H15 H 0 1 N N N 0.321 -16.834 36.947 1.947 -0.261 1.121 VAL 3 H polymer 1 1 51 ? ? ? PRD_000910 H16 H16 H 0 1 N N N 0.617 -17.041 39.932 1.081 0.138 -1.639 VAL 3 HA polymer 1 1 52 ? ? ? PRD_000910 H17 H17 H 0 1 N N N 2.342 -16.566 37.470 0.647 -2.534 -0.231 VAL 3 HB polymer 1 1 53 ? ? ? PRD_000910 H18 H18 H 0 0 N N N 4.323 -16.261 38.908 -0.122 -1.469 -2.985 VAL 3 HG11 polymer 1 1 54 ? ? ? PRD_000910 H19 H19 H 0 0 N N N 3.133 -14.929 39.102 -0.279 -3.169 -2.482 VAL 3 HG12 polymer 1 1 55 ? ? ? PRD_000910 H20 H20 H 0 0 N N N 3.259 -16.210 40.355 -1.232 -1.908 -1.665 VAL 3 HG13 polymer 1 1 56 ? ? ? PRD_000910 H21 H21 H 0 0 N N N 3.585 -18.530 38.334 2.981 -2.251 -1.017 VAL 3 HG21 polymer 1 1 57 ? ? ? PRD_000910 H22 H22 H 0 0 N N N 2.428 -18.636 39.704 2.112 -3.444 -2.012 VAL 3 HG22 polymer 1 1 58 ? ? ? PRD_000910 H23 H23 H 0 0 N N N 1.852 -18.881 38.020 2.383 -1.797 -2.631 VAL 3 HG23 polymer 1 1 59 ? ? ? PRD_000910 H24 H24 H 0 1 N N N 0.124 -15.224 41.053 -1.419 0.128 -1.731 LEU 4 H polymer 1 1 60 ? ? ? PRD_000910 H25 H25 H 0 1 N N N -0.705 -12.746 39.805 -2.694 0.344 0.897 LEU 4 HA polymer 1 1 61 ? ? ? PRD_000910 H26 H26 H 0 1 N N N 0.204 -13.545 42.628 -1.620 2.573 0.518 LEU 4 HB2 polymer 1 1 62 ? ? ? PRD_000910 H27 H27 H 0 1 N N N -0.559 -11.972 42.213 -2.527 2.724 -1.006 LEU 4 HB3 polymer 1 1 63 ? ? ? PRD_000910 H28 H28 H 0 1 N N N -1.771 -14.750 42.112 -4.661 2.451 0.310 LEU 4 HG polymer 1 1 64 ? ? ? PRD_000910 H29 H29 H 0 0 N N N -3.462 -13.788 43.640 -4.564 2.674 2.755 LEU 4 HD11 polymer 1 1 65 ? ? ? PRD_000910 H30 H30 H 0 0 N N N -1.800 -13.716 44.318 -3.605 1.263 2.245 LEU 4 HD12 polymer 1 1 66 ? ? ? PRD_000910 H31 H31 H 0 0 N N N -2.560 -12.235 43.643 -2.788 2.779 2.698 LEU 4 HD13 polymer 1 1 67 ? ? ? PRD_000910 H32 H32 H 0 0 N N N -3.838 -13.722 41.228 -3.797 4.692 -0.305 LEU 4 HD21 polymer 1 1 68 ? ? ? PRD_000910 H33 H33 H 0 0 N N N -2.963 -12.165 41.028 -4.606 4.732 1.280 LEU 4 HD22 polymer 1 1 69 ? ? ? PRD_000910 H34 H34 H 0 0 N N N -2.462 -13.606 40.079 -2.828 4.729 1.187 LEU 4 HD23 polymer 1 1 70 ? ? ? PRD_000910 H35 H35 H 0 1 N Y N 2.110 -8.928 39.121 -7.662 0.909 -2.485 0JU 5 H1 polymer 1 1 71 ? ? ? PRD_000910 H36 H36 H 0 1 N N N 3.889 -8.183 40.184 -6.595 2.949 -2.334 0JU 5 HNF polymer 1 1 72 ? ? ? PRD_000910 H37 H37 H 0 1 N N N 3.619 -11.570 39.759 -5.937 -0.891 -1.734 0JU 5 HA polymer 1 1 73 ? ? ? PRD_000910 H38 H38 H 0 1 N N N 0.832 -11.591 38.673 -5.152 0.670 0.606 0JU 5 H polymer 1 1 74 ? ? ? PRD_000910 H39 H39 H 0 1 N N N 2.836 -10.424 37.098 -7.517 0.190 0.642 0JU 5 H7 polymer 1 1 75 ? ? ? PRD_000910 H40 H40 H 0 1 N N N 2.645 -12.194 37.333 -8.196 -0.848 -0.635 0JU 5 H8 polymer 1 1 76 ? ? ? PRD_000910 H41 H41 H 0 1 N N N 5.049 -12.291 38.091 -6.539 -2.609 -0.085 0JU 5 H9 polymer 1 1 77 ? ? ? PRD_000910 H42 H42 H 0 1 N N N 5.206 -10.554 37.662 -5.860 -1.571 1.192 0JU 5 H10 polymer 1 1 78 ? ? ? PRD_000910 H43 H43 H 0 1 N N N 6.005 -12.963 34.775 -6.719 -3.879 2.285 0JU 5 H11 polymer 1 1 79 ? ? ? PRD_000910 H44 H44 H 0 1 N N N 6.438 -12.996 36.452 -8.242 -3.738 2.980 0JU 5 H12 polymer 1 1 80 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_000910 O1 C1 DOUB N N 1 PRD_000910 C1 O2 SING N N 2 PRD_000910 O2 C2 SING N N 3 PRD_000910 C2 C3 SING N N 4 PRD_000910 C2 C4 SING N N 5 PRD_000910 C2 C5 SING N N 6 PRD_000910 C3 H1 SING N N 7 PRD_000910 C3 H2 SING N N 8 PRD_000910 C3 H3 SING N N 9 PRD_000910 C4 H4 SING N N 10 PRD_000910 C4 H5 SING N N 11 PRD_000910 C4 H6 SING N N 12 PRD_000910 C5 H7 SING N N 13 PRD_000910 C5 H8 SING N N 14 PRD_000910 C5 H9 SING N N 15 PRD_000910 N1 C6 SING N N 16 PRD_000910 N1 H10 SING N N 17 PRD_000910 C6 C7 SING N N 18 PRD_000910 C6 C8 SING N N 19 PRD_000910 C6 H11 SING N N 20 PRD_000910 C7 O3 DOUB N N 21 PRD_000910 C8 H12 SING N N 22 PRD_000910 C8 H13 SING N N 23 PRD_000910 C8 H14 SING N N 24 PRD_000910 N2 C9 SING N N 25 PRD_000910 N2 H15 SING N N 26 PRD_000910 C9 C10 SING N N 27 PRD_000910 C9 C11 SING N N 28 PRD_000910 C9 H16 SING N N 29 PRD_000910 C10 O4 DOUB N N 30 PRD_000910 C11 C12 SING N N 31 PRD_000910 C11 C13 SING N N 32 PRD_000910 C11 H17 SING N N 33 PRD_000910 C12 H18 SING N N 34 PRD_000910 C12 H19 SING N N 35 PRD_000910 C12 H20 SING N N 36 PRD_000910 C13 H21 SING N N 37 PRD_000910 C13 H22 SING N N 38 PRD_000910 C13 H23 SING N N 39 PRD_000910 N3 C14 SING N N 40 PRD_000910 N3 H24 SING N N 41 PRD_000910 C14 C15 SING N N 42 PRD_000910 C14 C16 SING N N 43 PRD_000910 C14 H25 SING N N 44 PRD_000910 C15 O5 DOUB N N 45 PRD_000910 C16 C17 SING N N 46 PRD_000910 C16 H26 SING N N 47 PRD_000910 C16 H27 SING N N 48 PRD_000910 C17 C18 SING N N 49 PRD_000910 C17 C19 SING N N 50 PRD_000910 C17 H28 SING N N 51 PRD_000910 C18 H29 SING N N 52 PRD_000910 C18 H30 SING N N 53 PRD_000910 C18 H31 SING N N 54 PRD_000910 C19 H32 SING N N 55 PRD_000910 C19 H33 SING N N 56 PRD_000910 C19 H34 SING N N 57 PRD_000910 O6 C24 DOUB N N 58 PRD_000910 N6 C24 SING N N 59 PRD_000910 C24 C23 SING N N 60 PRD_000910 C23 C22 SING N N 61 PRD_000910 C22 C21 SING N N 62 PRD_000910 C21 N5 SING N N 63 PRD_000910 C21 C20 SING N N 64 PRD_000910 C20 N4 DOUB N N 65 PRD_000910 C20 H35 SING N N 66 PRD_000910 N4 H36 SING N N 67 PRD_000910 C21 H37 SING N N 68 PRD_000910 N5 H38 SING N N 69 PRD_000910 C22 H39 SING N N 70 PRD_000910 C22 H40 SING N N 71 PRD_000910 C23 H41 SING N N 72 PRD_000910 C23 H42 SING N N 73 PRD_000910 N6 H43 SING N N 74 PRD_000910 N6 H44 SING N N 75 PRD_000910 C1 N1 SING N N 76 PRD_000910 C7 N2 SING N N 77 PRD_000910 C10 N3 SING N N 78 PRD_000910 C15 N5 SING N N 79 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_000910 SMILES ACDLabs 12.01 "O=C(OC(C)(C)C)NC(C(=O)NC(C(=O)NC(C(=O)NC(C=[N@H])CCC(=O)N)CC(C)C)C(C)C)C" PRD_000910 InChI InChI 1.03 "InChI=1S/C24H44N6O6/c1-13(2)11-17(21(33)28-16(12-25)9-10-18(26)31)29-22(34)19(14(3)4)30-20(32)15(5)27-23(35)36-24(6,7)8/h12-17,19,25H,9-11H2,1-8H3,(H2,26,31)(H,27,35)(H,28,33)(H,29,34)(H,30,32)/b25-12+/t15-,16+,17-,19+/m0/s1" PRD_000910 InChIKey InChI 1.03 ULFUAWXYVJGOOG-SHWWFGARSA-N PRD_000910 SMILES_CANONICAL CACTVS 3.370 "CC(C)C[C@H](NC(=O)[C@@H](NC(=O)[C@H](C)NC(=O)OC(C)(C)C)C(C)C)C(=O)N[C@@H](CCC(N)=O)C=N" PRD_000910 SMILES CACTVS 3.370 "CC(C)C[CH](NC(=O)[CH](NC(=O)[CH](C)NC(=O)OC(C)(C)C)C(C)C)C(=O)N[CH](CCC(N)=O)C=N" PRD_000910 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@@H](C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CCC(=O)N)C=N)NC(=O)OC(C)(C)C" PRD_000910 SMILES "OpenEye OEToolkits" 1.7.6 "CC(C)CC(C(=O)NC(CCC(=O)N)C=N)NC(=O)C(C(C)C)NC(=O)C(C)NC(=O)OC(C)(C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_000910 "SYSTEMATIC NAME" ACDLabs 12.01 "N-(tert-butoxycarbonyl)-L-alanyl-L-valyl-N-[(2R)-5-amino-1-imino-5-oxopentan-2-yl]-L-leucinamide" PRD_000910 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "tert-butyl N-[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-5-azanyl-1-azanylidene-5-oxidanylidene-pentan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]carbamate" #