data_PRDCC_002413 # _chem_comp.id PRD_002413 _chem_comp.name ? _chem_comp.formula "C19 H24 N5 O4" _chem_comp.formula_weight 386.425 _chem_comp.pdbx_release_status REF_ONLY _chem_comp.type peptide-like _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_002413 C1 C1 C 0 1 N N N 9.460 -5.140 22.185 5.488 2.188 0.151 ACE 1 C polymer 1 1 1 ? ? ? PRD_002413 O1 O1 O 0 1 N N N 10.592 -4.701 21.988 5.607 2.723 1.233 ACE 1 O polymer 1 1 2 ? ? ? PRD_002413 C2 C2 C 0 1 N N N 9.024 -6.474 21.654 6.616 2.245 -0.846 ACE 1 CH3 polymer 1 1 3 ? ? ? PRD_002413 N1 N1 N 0 1 N N N 8.557 -4.467 22.901 4.349 1.537 -0.157 GLY 2 N polymer 1 1 4 ? ? ? PRD_002413 C3 C3 C 0 1 N N N 8.904 -3.254 23.608 3.254 1.476 0.815 GLY 2 CA polymer 1 1 5 ? ? ? PRD_002413 C4 C4 C 0 1 N N N 8.097 -2.050 23.158 2.105 0.697 0.229 GLY 2 C polymer 1 1 6 ? ? ? PRD_002413 O2 O2 O 0 1 N N N 7.173 -2.172 22.366 2.192 0.237 -0.890 GLY 2 O polymer 1 1 7 ? ? ? PRD_002413 N2 N2 N 0 1 N N N 8.464 -0.872 23.665 0.981 0.510 0.949 PHE 3 N polymer 1 1 8 ? ? ? PRD_002413 C5 C5 C 0 1 N N S 7.750 0.350 23.344 -0.136 -0.247 0.380 PHE 3 CA polymer 1 1 9 ? ? ? PRD_002413 C6 C6 C 0 1 N N N 8.385 1.053 22.149 -1.421 0.179 1.041 PHE 3 C polymer 1 1 10 ? ? ? PRD_002413 O3 O3 O 0 1 N N N 9.562 1.399 22.175 -1.405 1.031 1.904 PHE 3 O polymer 1 1 11 ? ? ? PRD_002413 C7 C7 C 0 1 N N N 7.637 1.272 24.569 0.088 -1.742 0.616 PHE 3 CB polymer 1 1 12 ? ? ? PRD_002413 C8 C8 C 0 1 Y N N 6.757 0.680 25.642 1.306 -2.194 -0.147 PHE 3 CG polymer 1 1 13 ? ? ? PRD_002413 C9 C9 C 0 1 Y N N 7.302 -0.096 26.659 2.552 -2.149 0.450 PHE 3 CD1 polymer 1 1 14 ? ? ? PRD_002413 C10 C10 C 0 1 Y N N 5.374 0.782 25.556 1.177 -2.660 -1.442 PHE 3 CD2 polymer 1 1 15 ? ? ? PRD_002413 C11 C11 C 0 1 Y N N 6.482 -0.802 27.527 3.670 -2.563 -0.250 PHE 3 CE1 polymer 1 1 16 ? ? ? PRD_002413 C12 C12 C 0 1 Y N N 4.558 0.088 26.435 2.295 -3.075 -2.142 PHE 3 CE2 polymer 1 1 17 ? ? ? PRD_002413 C13 C13 C 0 1 Y N N 5.111 -0.718 27.411 3.542 -3.024 -1.547 PHE 3 CZ polymer 1 1 18 ? ? ? PRD_002413 N3 N3 N 0 1 N N N 7.602 1.221 21.081 -2.588 -0.387 0.675 HSV 4 N polymer 1 1 19 ? ? ? PRD_002413 C14 C14 C 0 1 N N S 8.104 1.857 19.864 -3.837 0.027 1.318 HSV 4 CA polymer 1 1 20 ? ? ? PRD_002413 C15 C15 C 0 1 N N N 7.442 1.290 18.597 -5.011 -0.246 0.376 HSV 4 CB polymer 1 1 21 ? ? ? PRD_002413 C16 C16 C 0 1 Y N N 7.907 -0.077 18.206 -4.885 0.625 -0.848 HSV 4 CG polymer 1 1 22 ? ? ? PRD_002413 N4 N4 N 1 1 Y N N 7.219 -0.826 17.258 -4.326 0.269 -2.014 HSV 4 ND1 polymer 1 1 23 ? ? ? PRD_002413 C17 C17 C 0 1 Y N N 9.000 -0.777 18.613 -5.321 1.894 -0.965 HSV 4 CD2 polymer 1 1 24 ? ? ? PRD_002413 C18 C18 C 0 1 Y N N 7.924 -1.935 17.112 -4.393 1.271 -2.847 HSV 4 CE1 polymer 1 1 25 ? ? ? PRD_002413 N5 N5 N 0 1 Y N N 9.000 -1.949 17.907 -5.011 2.303 -2.234 HSV 4 NE2 polymer 1 1 26 ? ? ? PRD_002413 C19 C19 C 0 1 N N N 7.902 3.383 19.921 -4.027 -0.751 2.595 HSV 4 C polymer 1 1 27 ? ? ? PRD_002413 O4 O4 O 0 1 N N N 8.744 4.104 19.459 -3.203 -1.568 2.932 HSV 4 O polymer 1 1 28 ? ? ? PRD_002413 H1 H1 H 0 1 N N N 9.854 -6.938 21.100 7.275 1.389 -0.699 ACE 1 H1 polymer 1 1 29 ? ? ? PRD_002413 H2 H2 H 0 1 N N N 8.733 -7.125 22.492 6.209 2.220 -1.857 ACE 1 H2 polymer 1 1 30 ? ? ? PRD_002413 H3 H3 H 0 1 N N N 8.165 -6.337 20.981 7.181 3.167 -0.704 ACE 1 H3 polymer 1 1 31 ? ? ? PRD_002413 H4 H4 H 0 1 N N N 7.619 -4.809 22.950 4.254 1.109 -1.022 GLY 2 H polymer 1 1 32 ? ? ? PRD_002413 H5 H5 H 0 1 N N N 8.727 -3.412 24.682 3.602 0.984 1.723 GLY 2 HA2 polymer 1 1 33 ? ? ? PRD_002413 H6 H6 H 0 1 N N N 9.970 -3.043 23.439 2.924 2.487 1.054 GLY 2 HA3 polymer 1 1 34 ? ? ? PRD_002413 H7 H7 H 0 1 N N N 9.250 -0.830 24.281 0.912 0.878 1.844 PHE 3 H polymer 1 1 35 ? ? ? PRD_002413 H8 H8 H 0 1 N N N 6.725 0.078 23.052 -0.198 -0.054 -0.692 PHE 3 HA polymer 1 1 36 ? ? ? PRD_002413 H9 H9 H 0 1 N N N 8.642 1.436 24.984 0.238 -1.923 1.680 PHE 3 HB2 polymer 1 1 37 ? ? ? PRD_002413 H10 H10 H 0 1 N N N 7.210 2.235 24.251 -0.783 -2.299 0.272 PHE 3 HB3 polymer 1 1 38 ? ? ? PRD_002413 H11 H11 H 0 1 N N N 8.374 -0.150 26.774 2.653 -1.789 1.463 PHE 3 HD1 polymer 1 1 39 ? ? ? PRD_002413 H12 H12 H 0 1 N N N 4.930 1.409 24.796 0.203 -2.700 -1.907 PHE 3 HD2 polymer 1 1 40 ? ? ? PRD_002413 H13 H13 H 0 1 N N N 6.920 -1.420 28.297 4.643 -2.527 0.216 PHE 3 HE1 polymer 1 1 41 ? ? ? PRD_002413 H14 H14 H 0 1 N N N 3.485 0.178 26.357 2.194 -3.439 -3.154 PHE 3 HE2 polymer 1 1 42 ? ? ? PRD_002413 H15 H15 H 0 1 N N N 4.474 -1.279 28.079 4.415 -3.348 -2.094 PHE 3 HZ polymer 1 1 43 ? ? ? PRD_002413 H16 H16 H 0 1 N N N 6.654 0.906 21.114 -2.601 -1.069 -0.015 HSV 4 H polymer 1 1 44 ? ? ? PRD_002413 H17 H17 H 0 1 N N N 9.185 1.667 19.789 -3.793 1.092 1.545 HSV 4 HA polymer 1 1 45 ? ? ? PRD_002413 H18 H18 H 0 1 N N N 7.655 1.976 17.763 -5.002 -1.294 0.078 HSV 4 HB2 polymer 1 1 46 ? ? ? PRD_002413 H19 H19 H 0 1 N N N 6.356 1.246 18.768 -5.947 -0.021 0.887 HSV 4 HB3 polymer 1 1 47 ? ? ? PRD_002413 H20 H20 H 0 1 N N N 6.372 -0.579 16.787 -3.932 -0.596 -2.207 HSV 4 HD1 polymer 1 1 48 ? ? ? PRD_002413 H21 H21 H 0 1 N N N 9.726 -0.468 19.350 -5.819 2.476 -0.204 HSV 4 HD2 polymer 1 1 49 ? ? ? PRD_002413 H22 H22 H 0 1 N N N 7.663 -2.733 16.433 -4.021 1.273 -3.861 HSV 4 HE1 polymer 1 1 50 ? ? ? PRD_002413 H23 H23 H 0 1 N N N 9.679 -2.681 17.973 -5.199 3.174 -2.619 HSV 4 HE2 polymer 1 1 51 ? ? ? PRD_002413 H24 H24 H 0 1 N Y N 7.013 3.800 20.371 -4.899 -0.579 3.208 HSV 4 HC polymer 1 1 52 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_002413 C1 O1 DOUB N N 1 PRD_002413 C1 C2 SING N N 2 PRD_002413 C2 H1 SING N N 3 PRD_002413 C2 H2 SING N N 4 PRD_002413 C2 H3 SING N N 5 PRD_002413 N1 C3 SING N N 6 PRD_002413 N1 H4 SING N N 7 PRD_002413 C3 C4 SING N N 8 PRD_002413 C3 H5 SING N N 9 PRD_002413 C3 H6 SING N N 10 PRD_002413 C4 O2 DOUB N N 11 PRD_002413 N2 C5 SING N N 12 PRD_002413 N2 H7 SING N N 13 PRD_002413 C5 C6 SING N N 14 PRD_002413 C5 C7 SING N N 15 PRD_002413 C5 H8 SING N N 16 PRD_002413 C6 O3 DOUB N N 17 PRD_002413 C7 C8 SING N N 18 PRD_002413 C7 H9 SING N N 19 PRD_002413 C7 H10 SING N N 20 PRD_002413 C8 C9 DOUB Y N 21 PRD_002413 C8 C10 SING Y N 22 PRD_002413 C9 C11 SING Y N 23 PRD_002413 C9 H11 SING N N 24 PRD_002413 C10 C12 DOUB Y N 25 PRD_002413 C10 H12 SING N N 26 PRD_002413 C11 C13 DOUB Y N 27 PRD_002413 C11 H13 SING N N 28 PRD_002413 C12 C13 SING Y N 29 PRD_002413 C12 H14 SING N N 30 PRD_002413 C13 H15 SING N N 31 PRD_002413 N5 C17 SING Y N 32 PRD_002413 N5 C18 SING Y N 33 PRD_002413 C17 C16 DOUB Y N 34 PRD_002413 O4 C19 DOUB N N 35 PRD_002413 C18 N4 DOUB Y N 36 PRD_002413 C16 N4 SING Y N 37 PRD_002413 C16 C15 SING N N 38 PRD_002413 C14 C19 SING N N 39 PRD_002413 C14 C15 SING N N 40 PRD_002413 C14 N3 SING N N 41 PRD_002413 N3 H16 SING N N 42 PRD_002413 C14 H17 SING N N 43 PRD_002413 C15 H18 SING N N 44 PRD_002413 C15 H19 SING N N 45 PRD_002413 N4 H20 SING N N 46 PRD_002413 C17 H21 SING N N 47 PRD_002413 C18 H22 SING N N 48 PRD_002413 N5 H23 SING N N 49 PRD_002413 C19 H24 SING N N 50 PRD_002413 C1 N1 SING N N 51 PRD_002413 C4 N2 SING N N 52 PRD_002413 C6 N3 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_002413 InChI InChI 1.06 "InChI=1S/C19H23N5O4/c1-13(26)21-10-18(27)24-17(7-14-5-3-2-4-6-14)19(28)23-16(11-25)8-15-9-20-12-22-15/h2-6,9,11-12,16-17H,7-8,10H2,1H3,(H,20,22)(H,21,26)(H,23,28)(H,24,27)/p+1/t16-,17-/m0/s1" PRD_002413 InChIKey InChI 1.06 NLQLHNHRQGQHQD-IRXDYDNUSA-O PRD_002413 SMILES_CANONICAL CACTVS 3.385 "CC(=O)NCC(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc2c[nH]c[nH+]2)C=O" PRD_002413 SMILES CACTVS 3.385 "CC(=O)NCC(=O)N[CH](Cc1ccccc1)C(=O)N[CH](Cc2c[nH]c[nH+]2)C=O" PRD_002413 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)NCC(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc2c[nH]c[nH+]2)C=O" PRD_002413 SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NCC(=O)NC(Cc1ccccc1)C(=O)NC(Cc2c[nH]c[nH+]2)C=O" # _pdbx_chem_comp_identifier.comp_id PRD_002413 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-(2-acetamidoethanoylamino)-~{N}-[(2~{S})-1-(1~{H}-imidazol-3-ium-4-yl)-3-oxidanylidene-propan-2-yl]-3-phenyl-propanamide" #