data_PRDCC_900045 # _chem_comp.id PRD_900045 _chem_comp.name N-OCTANOYLSUCROSE _chem_comp.type saccharide _chem_comp.formula "C20 H36 O12" _chem_comp.pdbx_release_status REF_ONLY _chem_comp.formula_weight 468.493 _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_900045 C1 C1 C 0 1 N N R -17.809 -20.666 61.771 -3.359 -0.778 -1.184 GLC 1 C1 polymer 1 1 1 ? ? ? PRD_900045 C2 C2 C 0 1 N N R -19.340 -20.959 61.871 -4.464 -1.813 -0.956 GLC 1 C2 polymer 1 1 2 ? ? ? PRD_900045 C3 C3 C 0 1 N N S -19.779 -20.949 63.357 -4.375 -2.336 0.481 GLC 1 C3 polymer 1 1 3 ? ? ? PRD_900045 C4 C4 C 0 1 N N S -19.003 -22.011 64.105 -2.977 -2.916 0.716 GLC 1 C4 polymer 1 1 4 ? ? ? PRD_900045 C5 C5 C 0 1 N N R -17.473 -21.733 64.015 -1.929 -1.839 0.423 GLC 1 C5 polymer 1 1 5 ? ? ? PRD_900045 C6 C6 C 0 1 N N N -16.677 -22.796 64.734 -0.528 -2.429 0.597 GLC 1 C6 polymer 1 1 6 ? ? ? PRD_900045 O2 O2 O 0 1 N N N -20.037 -19.963 61.111 -5.739 -1.203 -1.164 GLC 1 O2 polymer 1 1 7 ? ? ? PRD_900045 O3 O3 O 0 1 N N N -21.180 -21.210 63.419 -5.356 -3.355 0.681 GLC 1 O3 polymer 1 1 8 ? ? ? PRD_900045 O4 O4 O 0 1 N N N -19.417 -22.014 65.508 -2.858 -3.341 2.075 GLC 1 O4 polymer 1 1 9 ? ? ? PRD_900045 O5 O5 O 0 1 N N N -17.087 -21.702 62.573 -2.088 -1.375 -0.919 GLC 1 O5 polymer 1 1 10 ? ? ? PRD_900045 O6 O6 O 0 1 N N N -16.562 -23.978 63.923 0.447 -1.396 0.438 GLC 1 O6 polymer 1 1 11 ? ? ? PRD_900045 O1 O1 O 0 1 N N N -17.544 -19.336 62.308 -3.557 0.332 -0.306 TRV 2 O2 polymer 1 1 12 ? ? ? PRD_900045 "C1'" C7 C 0 1 N N N -16.885 -17.846 60.462 -2.938 1.883 -2.061 TRV 2 C1 polymer 1 1 13 ? ? ? PRD_900045 "C2'" C8 C 0 1 N N S -16.445 -18.484 61.797 -2.735 1.462 -0.604 TRV 2 C2 polymer 1 1 14 ? ? ? PRD_900045 "C3'" C9 C 0 1 N N S -16.141 -17.469 62.966 -3.094 2.632 0.333 TRV 2 C3 polymer 1 1 15 ? ? ? PRD_900045 "C4'" C10 C 0 1 N N S -15.116 -18.218 63.774 -1.766 2.957 1.060 TRV 2 C4 polymer 1 1 16 ? ? ? PRD_900045 "C5'" C11 C 0 1 N N R -14.284 -18.742 62.632 -0.713 2.343 0.102 TRV 2 C5 polymer 1 1 17 ? ? ? PRD_900045 "C6'" C12 C 0 1 N N N -13.107 -19.639 62.929 0.572 2.005 0.860 TRV 2 C6 polymer 1 1 18 ? ? ? PRD_900045 "O1'" O7 O 0 1 N N N -15.864 -17.015 59.930 -2.412 0.873 -2.925 TRV 2 O1 polymer 1 1 19 ? ? ? PRD_900045 "O2'" O8 O 0 1 N N N -15.220 -19.240 61.656 -1.354 1.137 -0.376 TRV 2 O5 polymer 1 1 20 ? ? ? PRD_900045 "O3'" O9 O 0 1 N N N -17.285 -17.185 63.759 -4.094 2.232 1.273 TRV 2 O3 polymer 1 1 21 ? ? ? PRD_900045 "O4'" O10 O 0 1 N N N -14.355 -17.282 64.563 -1.583 4.369 1.181 TRV 2 O4 polymer 1 1 22 ? ? ? PRD_900045 "O6'" O11 O 0 1 N N N -12.282 -20.249 61.896 1.580 1.543 -0.078 TRV 2 O6 polymer 1 1 23 ? ? ? PRD_900045 C1N C13 C 0 1 N N N -11.673 -21.361 62.448 2.775 1.204 0.430 TRV 2 C1N polymer 1 1 24 ? ? ? PRD_900045 C2N C14 C 0 1 N N N -10.883 -22.243 61.515 3.870 0.715 -0.482 TRV 2 C2N polymer 1 1 25 ? ? ? PRD_900045 C3N C15 C 0 1 N N N -9.411 -22.027 61.924 5.119 0.399 0.343 TRV 2 C3N polymer 1 1 26 ? ? ? PRD_900045 C4N C16 C 0 1 N N N -8.401 -23.148 61.658 6.231 -0.097 -0.583 TRV 2 C4N polymer 1 1 27 ? ? ? PRD_900045 C5N C17 C 0 1 N N N -7.081 -22.500 61.227 7.479 -0.414 0.243 TRV 2 C5N polymer 1 1 28 ? ? ? PRD_900045 C6N C18 C 0 1 N N N -5.916 -23.493 61.032 8.591 -0.909 -0.684 TRV 2 C6N polymer 1 1 29 ? ? ? PRD_900045 C7N C19 C 0 1 N N N -4.642 -22.794 60.659 9.840 -1.226 0.142 TRV 2 C7N polymer 1 1 30 ? ? ? PRD_900045 C8N C20 C 0 1 N N N -3.463 -23.756 60.456 10.952 -1.722 -0.785 TRV 2 C8N polymer 1 1 31 ? ? ? PRD_900045 O1N O12 O 0 1 N N N -11.897 -21.672 63.598 2.973 1.289 1.619 TRV 2 O1N polymer 1 1 32 ? ? ? PRD_900045 H1 H1 H 0 1 N N N -17.500 -20.724 60.717 -3.391 -0.434 -2.218 GLC 1 H1 polymer 1 1 33 ? ? ? PRD_900045 H2 H2 H 0 1 N N N -19.532 -21.959 61.454 -4.337 -2.641 -1.653 GLC 1 H2 polymer 1 1 34 ? ? ? PRD_900045 H3 H3 H 0 1 N N N -19.552 -19.962 63.787 -4.552 -1.517 1.179 GLC 1 H3 polymer 1 1 35 ? ? ? PRD_900045 H4 H4 H 0 1 N N N -19.208 -22.993 63.653 -2.820 -3.767 0.053 GLC 1 H4 polymer 1 1 36 ? ? ? PRD_900045 H5 H5 H 0 1 N N N -17.266 -20.754 64.471 -2.061 -1.006 1.114 GLC 1 H5 polymer 1 1 37 ? ? ? PRD_900045 H61 H6 H 0 1 N N N -17.184 -23.052 65.676 -0.438 -2.864 1.592 GLC 1 H61 polymer 1 1 38 ? ? ? PRD_900045 H62 H7 H 0 1 N N N -15.671 -22.408 64.953 -0.364 -3.202 -0.154 GLC 1 H62 polymer 1 1 39 ? ? ? PRD_900045 HO2 H8 H 0 1 N N N -20.972 -20.124 61.159 -5.864 -0.845 -2.054 GLC 1 HO2 polymer 1 1 40 ? ? ? PRD_900045 HO3 H9 H 0 1 N N N -21.463 -21.207 64.326 -6.265 -3.058 0.542 GLC 1 HO3 polymer 1 1 41 ? ? ? PRD_900045 HO4 H10 H 0 1 N N N -18.931 -22.680 65.980 -3.496 -4.021 2.331 GLC 1 HO4 polymer 1 1 42 ? ? ? PRD_900045 HO6 H11 H 0 1 N N N -16.059 -24.635 64.390 1.360 -1.699 0.536 GLC 1 HO6 polymer 1 1 43 ? ? ? PRD_900045 "H1'1" H12 H 0 1 N N N -17.787 -17.241 60.634 -4.002 2.011 -2.258 TRV 2 H12 polymer 1 1 44 ? ? ? PRD_900045 "H1'2" H13 H 0 1 N N N -17.111 -18.644 59.740 -2.418 2.823 -2.244 TRV 2 H11 polymer 1 1 45 ? ? ? PRD_900045 "H3'" H14 H 0 1 N N N -15.701 -16.552 62.547 -3.436 3.492 -0.243 TRV 2 H3 polymer 1 1 46 ? ? ? PRD_900045 "H4'" H15 H 0 1 N N N -15.564 -19.027 64.369 -1.730 2.477 2.038 TRV 2 H4 polymer 1 1 47 ? ? ? PRD_900045 "H5'" H16 H 0 1 N N N -13.840 -17.844 62.177 -0.503 3.023 -0.724 TRV 2 H5 polymer 1 1 48 ? ? ? PRD_900045 "H6'1" H17 H 0 1 N N N -13.507 -20.472 63.526 0.935 2.895 1.375 TRV 2 H61 polymer 1 1 49 ? ? ? PRD_900045 "H6'2" H18 H 0 1 N N N -12.421 -19.041 63.547 0.368 1.221 1.590 TRV 2 H62 polymer 1 1 50 ? ? ? PRD_900045 "H1'" H19 H 0 1 N N N -16.159 -16.635 59.111 -2.506 1.073 -3.866 TRV 2 HO1 polymer 1 1 51 ? ? ? PRD_900045 H6 H20 H 0 1 N N N -17.051 -16.572 64.446 -4.357 2.930 1.888 TRV 2 HO3 polymer 1 1 52 ? ? ? PRD_900045 H7 H21 H 0 1 N N N -14.891 -16.960 65.278 -0.765 4.623 1.630 TRV 2 HO4 polymer 1 1 53 ? ? ? PRD_900045 H2N1 H22 H 0 1 N N N -11.043 -21.943 60.469 3.538 -0.185 -0.999 TRV 2 H22 polymer 1 1 54 ? ? ? PRD_900045 H2N2 H23 H 0 1 N N N -11.170 -23.297 61.642 4.105 1.489 -1.214 TRV 2 H23 polymer 1 1 55 ? ? ? PRD_900045 H3N1 H24 H 0 1 N N N -9.054 -21.135 61.388 5.451 1.299 0.860 TRV 2 H24 polymer 1 1 56 ? ? ? PRD_900045 H3N2 H25 H 0 1 N N N -9.401 -21.833 63.007 4.884 -0.375 1.075 TRV 2 H25 polymer 1 1 57 ? ? ? PRD_900045 H4N1 H26 H 0 1 N N N -8.774 -23.805 60.858 5.899 -0.997 -1.100 TRV 2 H26 polymer 1 1 58 ? ? ? PRD_900045 H4N2 H27 H 0 1 N N N -8.247 -23.737 62.574 6.466 0.676 -1.315 TRV 2 H27 polymer 1 1 59 ? ? ? PRD_900045 H5N1 H28 H 0 1 N N N -6.787 -21.772 61.998 7.811 0.487 0.759 TRV 2 H28 polymer 1 1 60 ? ? ? PRD_900045 H5N2 H29 H 0 1 N N N -7.250 -21.977 60.274 7.244 -1.187 0.974 TRV 2 H29 polymer 1 1 61 ? ? ? PRD_900045 H6N1 H30 H 0 1 N N N -6.181 -24.200 60.232 8.259 -1.810 -1.201 TRV 2 H30 polymer 1 1 62 ? ? ? PRD_900045 H6N2 H31 H 0 1 N N N -5.758 -24.044 61.971 8.826 -0.136 -1.416 TRV 2 H31 polymer 1 1 63 ? ? ? PRD_900045 H7N1 H32 H 0 1 N N N -4.383 -22.087 61.461 10.172 -0.326 0.659 TRV 2 H32 polymer 1 1 64 ? ? ? PRD_900045 H7N2 H33 H 0 1 N N N -4.808 -22.241 59.723 9.605 -1.999 0.873 TRV 2 H33 polymer 1 1 65 ? ? ? PRD_900045 H8N1 H34 H 0 1 N N N -2.564 -23.183 60.186 10.620 -2.622 -1.302 TRV 2 H34 polymer 1 1 66 ? ? ? PRD_900045 H8N2 H35 H 0 1 N N N -3.278 -24.311 61.388 11.187 -0.949 -1.516 TRV 2 H35 polymer 1 1 67 ? ? ? PRD_900045 H8N3 H36 H 0 1 N N N -3.703 -24.464 59.649 11.841 -1.948 -0.197 TRV 2 H36 polymer 1 1 68 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_900045 "O1'" "C1'" SING N N 1 PRD_900045 C8N C7N SING N N 2 PRD_900045 "C1'" "C2'" SING N N 3 PRD_900045 C7N C6N SING N N 4 PRD_900045 C6N C5N SING N N 5 PRD_900045 O2 C2 SING N N 6 PRD_900045 C5N C4N SING N N 7 PRD_900045 C2N C3N SING N N 8 PRD_900045 C2N C1N SING N N 9 PRD_900045 "O2'" "C2'" SING N N 10 PRD_900045 "O2'" "C5'" SING N N 11 PRD_900045 C4N C3N SING N N 12 PRD_900045 C1 C2 SING N N 13 PRD_900045 C1 O1 SING N N 14 PRD_900045 C1 O5 SING N N 15 PRD_900045 "C2'" O1 SING N N 16 PRD_900045 "C2'" "C3'" SING N N 17 PRD_900045 C2 C3 SING N N 18 PRD_900045 "O6'" C1N SING N N 19 PRD_900045 "O6'" "C6'" SING N N 20 PRD_900045 C1N O1N DOUB N N 21 PRD_900045 O5 C5 SING N N 22 PRD_900045 "C5'" "C6'" SING N N 23 PRD_900045 "C5'" "C4'" SING N N 24 PRD_900045 "C3'" "O3'" SING N N 25 PRD_900045 "C3'" "C4'" SING N N 26 PRD_900045 C3 O3 SING N N 27 PRD_900045 C3 C4 SING N N 28 PRD_900045 "C4'" "O4'" SING N N 29 PRD_900045 O6 C6 SING N N 30 PRD_900045 C5 C4 SING N N 31 PRD_900045 C5 C6 SING N N 32 PRD_900045 C4 O4 SING N N 33 PRD_900045 C1 H1 SING N N 34 PRD_900045 C2 H2 SING N N 35 PRD_900045 C3 H3 SING N N 36 PRD_900045 C4 H4 SING N N 37 PRD_900045 C5 H5 SING N N 38 PRD_900045 C6 H61 SING N N 39 PRD_900045 C6 H62 SING N N 40 PRD_900045 O2 HO2 SING N N 41 PRD_900045 O3 HO3 SING N N 42 PRD_900045 O4 HO4 SING N N 43 PRD_900045 O6 HO6 SING N N 44 PRD_900045 "C1'" "H1'1" SING N N 45 PRD_900045 "C1'" "H1'2" SING N N 46 PRD_900045 "C3'" "H3'" SING N N 47 PRD_900045 "C4'" "H4'" SING N N 48 PRD_900045 "C5'" "H5'" SING N N 49 PRD_900045 "C6'" "H6'1" SING N N 50 PRD_900045 "C6'" "H6'2" SING N N 51 PRD_900045 "O1'" "H1'" SING N N 52 PRD_900045 "O3'" H6 SING N N 53 PRD_900045 "O4'" H7 SING N N 54 PRD_900045 C2N H2N1 SING N N 55 PRD_900045 C2N H2N2 SING N N 56 PRD_900045 C3N H3N1 SING N N 57 PRD_900045 C3N H3N2 SING N N 58 PRD_900045 C4N H4N1 SING N N 59 PRD_900045 C4N H4N2 SING N N 60 PRD_900045 C5N H5N1 SING N N 61 PRD_900045 C5N H5N2 SING N N 62 PRD_900045 C6N H6N1 SING N N 63 PRD_900045 C6N H6N2 SING N N 64 PRD_900045 C7N H7N1 SING N N 65 PRD_900045 C7N H7N2 SING N N 66 PRD_900045 C8N H8N1 SING N N 67 PRD_900045 C8N H8N2 SING N N 68 PRD_900045 C8N H8N3 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_900045 SMILES ACDLabs 12.01 "C1(C(C(O)C(O)C(CO)O1)O)OC2(CO)C(O)C(O)C(COC(=O)CCCCCCC)O2" PRD_900045 InChI InChI 1.03 ;InChI=1S/C20H36O12/c1-2-3-4-5-6-7-13(23)29-9-12-15(25)18(28)20(10-22,31-12)32-19-17(27)16(26)14(24)11(8-21)30-19/h11-12 ,14-19,21-22,24-28H,2-10H2,1H3/t11-,12-,14-,15-,16+,17-,18+,19-,20+/m1/s1 ; PRD_900045 InChIKey InChI 1.03 AWSYOWHJNGZJGU-OASARBKBSA-N PRD_900045 SMILES_CANONICAL CACTVS 3.385 "CCCCCCCC(=O)OC[C@H]1O[C@@](CO)(O[C@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@@H]1O" PRD_900045 SMILES CACTVS 3.385 "CCCCCCCC(=O)OC[CH]1O[C](CO)(O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH](O)[CH]1O" PRD_900045 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCC(=O)OC[C@@H]1[C@H]([C@@H]([C@](O1)(CO)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O" PRD_900045 SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCC(=O)OCC1C(C(C(O1)(CO)OC2C(C(C(C(O2)CO)O)O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_900045 "SYSTEMATIC NAME" ACDLabs 12.01 "6-O-octanoyl-beta-D-fructofuranosyl alpha-D-glucopyranoside" PRD_900045 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 ;[(2~{R},3~{S},4~{S},5~{S})-5-(hydroxymethyl)-5-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)o xan-2-yl]oxy-3,4-bis(oxidanyl)oxolan-2-yl]methyl octanoate ; #