data_PRDCC_900069 # _chem_comp.id PRD_900069 _chem_comp.name "6-O-(6-O-phosphono-beta-D-glucopyranosyl)-beta-D-glucopyranose" _chem_comp.type saccharide _chem_comp.formula "C12 H23 O14 P" _chem_comp.pdbx_release_status REF_ONLY _chem_comp.formula_weight 422.276 _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_900069 "C2'" C8 C 0 1 N N R -0.703 10.870 29.881 -5.549 0.631 0.207 BGC 1 C2 polymer 1 1 1 ? ? ? PRD_900069 "C3'" C11 C 0 1 N N S 0.348 10.021 30.154 -4.637 1.767 -0.267 BGC 1 C3 polymer 1 1 2 ? ? ? PRD_900069 "C4'" C10 C 0 1 N N S -0.044 8.632 29.959 -3.220 1.523 0.259 BGC 1 C4 polymer 1 1 3 ? ? ? PRD_900069 "C5'" C9 C 0 1 N N R -0.524 8.436 28.559 -2.735 0.152 -0.218 BGC 1 C5 polymer 1 1 4 ? ? ? PRD_900069 "C6'" C12 C 0 1 N N N -0.842 6.985 28.364 -1.343 -0.124 0.353 BGC 1 C6 polymer 1 1 5 ? ? ? PRD_900069 "C1'" C7 C 0 1 N N R -1.343 10.612 28.500 -4.974 -0.706 -0.268 BGC 1 C1 polymer 1 1 6 ? ? ? PRD_900069 "O1'" O10 O 0 1 N N N -2.503 11.328 28.374 -5.788 -1.775 0.218 BGC 1 O1 polymer 1 1 7 ? ? ? PRD_900069 "O2'" O11 O 0 1 N N N -0.240 12.243 29.977 -6.857 0.808 -0.338 BGC 1 O2 polymer 1 1 8 ? ? ? PRD_900069 "O3'" O14 O 0 1 N N N 0.816 10.209 31.557 -5.126 3.013 0.234 BGC 1 O3 polymer 1 1 9 ? ? ? PRD_900069 "O4'" O13 O 0 1 N N N 1.041 7.781 30.216 -2.345 2.539 -0.237 BGC 1 O4 polymer 1 1 10 ? ? ? PRD_900069 "O5'" O12 O 0 1 N N N -1.631 9.247 28.259 -3.643 -0.856 0.231 BGC 1 O5 polymer 1 1 11 ? ? ? PRD_900069 O1 O6 O 0 1 N N N 0.269 6.161 28.409 -0.842 -1.350 -0.184 BGC 1 O6 polymer 1 1 12 ? ? ? PRD_900069 C1 C1 C 0 1 N N R 0.300 4.929 27.745 0.460 -1.703 0.288 BG6 2 C1 polymer 1 1 13 ? ? ? PRD_900069 C2 C2 C 0 1 N N R -1.068 4.528 27.252 0.841 -3.085 -0.251 BG6 2 C2 polymer 1 1 14 ? ? ? PRD_900069 O5 O5 O 0 1 N N N 1.266 4.949 26.720 1.409 -0.737 -0.166 BG6 2 O5 polymer 1 1 15 ? ? ? PRD_900069 C3 C3 C 0 1 N N S -1.066 4.294 25.857 2.260 -3.430 0.210 BG6 2 C3 polymer 1 1 16 ? ? ? PRD_900069 O2 O9 O 0 1 N N N -1.473 3.353 27.936 -0.074 -4.062 0.250 BG6 2 O2 polymer 1 1 17 ? ? ? PRD_900069 C4 C4 C 0 1 N N S -0.540 5.421 25.169 3.220 -2.335 -0.266 BG6 2 C4 polymer 1 1 18 ? ? ? PRD_900069 O3 O8 O 0 1 N N N -2.424 3.949 25.418 2.652 -4.686 -0.347 BG6 2 O3 polymer 1 1 19 ? ? ? PRD_900069 C5 C5 C 0 1 N N R 0.882 5.708 25.596 2.747 -0.982 0.273 BG6 2 C5 polymer 1 1 20 ? ? ? PRD_900069 O4 O7 O 0 1 N N N -0.553 5.253 23.733 4.536 -2.608 0.219 BG6 2 O4 polymer 1 1 21 ? ? ? PRD_900069 C6 C6 C 0 1 N N N 1.039 7.166 25.905 3.666 0.125 -0.247 BG6 2 C6 polymer 1 1 22 ? ? ? PRD_900069 O6 O4 O 0 1 N N N 1.623 8.020 24.967 3.296 1.370 0.348 BG6 2 O6 polymer 1 1 23 ? ? ? PRD_900069 P P1 P 0 1 N N N 0.712 8.695 23.879 4.052 2.754 0.027 BG6 2 P polymer 1 1 24 ? ? ? PRD_900069 O1P O2 O 0 1 N N N 1.581 9.628 23.087 3.826 3.144 -1.519 BG6 2 O1P polymer 1 1 25 ? ? ? PRD_900069 O3P O1 O 0 1 N N N -0.409 9.499 24.539 3.460 3.920 0.966 BG6 2 O2P polymer 1 1 26 ? ? ? PRD_900069 O2P O3 O 0 1 N N N 0.137 7.617 22.964 5.501 2.598 0.289 BG6 2 O3P polymer 1 1 27 ? ? ? PRD_900069 H15 H15 H 0 1 N N N -1.491 10.721 30.634 -5.603 0.637 1.296 BGC 1 H2 polymer 1 1 28 ? ? ? PRD_900069 H20 H20 H 0 1 N N N 1.188 10.245 29.481 -4.623 1.791 -1.357 BGC 1 H3 polymer 1 1 29 ? ? ? PRD_900069 H18 H18 H 0 1 N N N -0.870 8.395 30.646 -3.226 1.548 1.349 BGC 1 H4 polymer 1 1 30 ? ? ? PRD_900069 H17 H17 H 0 1 N N N 0.303 8.693 27.880 -2.690 0.141 -1.307 BGC 1 H5 polymer 1 1 31 ? ? ? PRD_900069 H22 H22 H 0 1 N N N -1.325 6.864 27.383 -1.404 -0.201 1.439 BGC 1 H6C1 polymer 1 1 32 ? ? ? PRD_900069 H23 H23 H 0 1 N N N -1.538 6.673 29.156 -0.671 0.691 0.084 BGC 1 H6C2 polymer 1 1 33 ? ? ? PRD_900069 H13 H13 H 0 1 N N N -0.622 10.956 27.744 -4.958 -0.728 -1.358 BGC 1 H1 polymer 1 1 34 ? ? ? PRD_900069 H14 H14 H 0 1 N N N -2.327 12.248 28.533 -5.482 -2.654 -0.045 BGC 1 HA polymer 1 1 35 ? ? ? PRD_900069 H16 H16 H 0 1 N N N 0.151 12.387 30.831 -7.487 0.121 -0.082 BGC 1 HB polymer 1 1 36 ? ? ? PRD_900069 H21 H21 H 0 1 N N N 1.540 9.619 31.732 -6.024 3.228 -0.054 BGC 1 HC polymer 1 1 37 ? ? ? PRD_900069 H19 H19 H 0 1 N N N 1.341 7.911 31.108 -2.593 3.435 0.027 BGC 1 HD polymer 1 1 38 ? ? ? PRD_900069 H1 H1 H 0 1 N N N 0.604 4.163 28.474 0.457 -1.726 1.378 BG6 2 HC1 polymer 1 1 39 ? ? ? PRD_900069 H2 H2 H 0 1 N N N -1.768 5.344 27.484 0.803 -3.074 -1.340 BG6 2 HC2 polymer 1 1 40 ? ? ? PRD_900069 H3 H3 H 0 1 N N N -0.418 3.430 25.651 2.286 -3.489 1.298 BG6 2 HC3 polymer 1 1 41 ? ? ? PRD_900069 H12 H12 H 0 1 N N N -1.473 3.515 28.872 -0.995 -3.903 -0.000 BG6 2 HO2 polymer 1 1 42 ? ? ? PRD_900069 H4 H4 H 0 1 N N N -1.147 6.303 25.421 3.231 -2.308 -1.356 BG6 2 HC4 polymer 1 1 43 ? ? ? PRD_900069 H11 H11 H 0 1 N N N -2.732 3.193 25.904 2.082 -5.424 -0.091 BG6 2 HO3 polymer 1 1 44 ? ? ? PRD_900069 H5 H5 H 0 1 N N N 1.544 5.465 24.752 2.775 -0.996 1.363 BG6 2 HC5 polymer 1 1 45 ? ? ? PRD_900069 H10 H10 H 0 1 N N N -0.311 6.071 23.316 4.899 -3.451 -0.084 BG6 2 HO4 polymer 1 1 46 ? ? ? PRD_900069 H6 H6 H 0 1 N N N 1.649 7.233 26.818 4.699 -0.109 0.011 BG6 2 HC61 polymer 1 1 47 ? ? ? PRD_900069 H7 H7 H 0 1 N N N 0.031 7.558 26.107 3.570 0.197 -1.331 BG6 2 HC62 polymer 1 1 48 ? ? ? PRD_900069 H9 H9 H 0 1 N N N 1.594 9.354 22.177 2.898 3.263 -1.763 BG6 2 H1O1 polymer 1 1 49 ? ? ? PRD_900069 H8 H8 H 0 1 N N N -1.250 9.168 24.248 3.871 4.785 0.826 BG6 2 H2O2 polymer 1 1 50 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_900069 O2P P DOUB N N 1 PRD_900069 O1P P SING N N 2 PRD_900069 O4 C4 SING N N 3 PRD_900069 P O3P SING N N 4 PRD_900069 P O6 SING N N 5 PRD_900069 O6 C6 SING N N 6 PRD_900069 C4 C5 SING N N 7 PRD_900069 C4 C3 SING N N 8 PRD_900069 O3 C3 SING N N 9 PRD_900069 C5 C6 SING N N 10 PRD_900069 C5 O5 SING N N 11 PRD_900069 C3 C2 SING N N 12 PRD_900069 O5 C1 SING N N 13 PRD_900069 C2 C1 SING N N 14 PRD_900069 C2 O2 SING N N 15 PRD_900069 C1 O1 SING N N 16 PRD_900069 "O5'" "C1'" SING N N 17 PRD_900069 "O5'" "C5'" SING N N 18 PRD_900069 "C6'" O1 SING N N 19 PRD_900069 "C6'" "C5'" SING N N 20 PRD_900069 "O1'" "C1'" SING N N 21 PRD_900069 "C1'" "C2'" SING N N 22 PRD_900069 "C5'" "C4'" SING N N 23 PRD_900069 "C2'" "O2'" SING N N 24 PRD_900069 "C2'" "C3'" SING N N 25 PRD_900069 "C4'" "C3'" SING N N 26 PRD_900069 "C4'" "O4'" SING N N 27 PRD_900069 "C3'" "O3'" SING N N 28 PRD_900069 C1 H1 SING N N 29 PRD_900069 C2 H2 SING N N 30 PRD_900069 C3 H3 SING N N 31 PRD_900069 C4 H4 SING N N 32 PRD_900069 C5 H5 SING N N 33 PRD_900069 C6 H6 SING N N 34 PRD_900069 C6 H7 SING N N 35 PRD_900069 O3P H8 SING N N 36 PRD_900069 O1P H9 SING N N 37 PRD_900069 O4 H10 SING N N 38 PRD_900069 O3 H11 SING N N 39 PRD_900069 O2 H12 SING N N 40 PRD_900069 "C1'" H13 SING N N 41 PRD_900069 "O1'" H14 SING N N 42 PRD_900069 "C2'" H15 SING N N 43 PRD_900069 "O2'" H16 SING N N 44 PRD_900069 "C5'" H17 SING N N 45 PRD_900069 "C4'" H18 SING N N 46 PRD_900069 "O4'" H19 SING N N 47 PRD_900069 "C3'" H20 SING N N 48 PRD_900069 "O3'" H21 SING N N 49 PRD_900069 "C6'" H22 SING N N 50 PRD_900069 "C6'" H23 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_900069 SMILES ACDLabs 12.01 "C2(OCC1OC(C(O)C(C1O)O)O)C(O)C(C(C(COP(O)(O)=O)O2)O)O" PRD_900069 InChI InChI 1.03 ;InChI=1S/C12H23O14P/c13-5-3(25-11(19)9(17)7(5)15)1-23-12-10(18)8(16)6(14)4(26-12)2-24-27(20,21)22/h3-19H,1-2H2,(H2,20,2 1,22)/t3-,4-,5-,6-,7+,8+,9-,10-,11-,12-/m1/s1 ; PRD_900069 InChIKey InChI 1.03 MPJUWDDYGSGMFC-LIZSDCNHSA-N PRD_900069 SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1O[C@H](CO[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H](O)[C@H]2O)[C@@H](O)[C@H](O)[C@H]1O" PRD_900069 SMILES CACTVS 3.385 "O[CH]1O[CH](CO[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH](O)[CH]2O)[CH](O)[CH](O)[CH]1O" PRD_900069 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)O" PRD_900069 SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)O)O)O)O)OC2C(C(C(C(O2)COP(=O)(O)O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_900069 "SYSTEMATIC NAME" ACDLabs 12.01 "6-O-(6-O-phosphono-beta-D-glucopyranosyl)-beta-D-glucopyranose" PRD_900069 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 ;[(2~{R},3~{S},4~{S},5~{R},6~{R})-3,4,5-tris(oxidanyl)-6-[[(2~{R},3~{S},4~{S},5~{R},6~{R})-3,4,5,6-tetrakis(oxidanyl)oxa n-2-yl]methoxy]oxan-2-yl]methyl dihydrogen phosphate ; #