data_PRDCC_900082 # _chem_comp.id PRD_900082 _chem_comp.name 2-deoxy-2-fluoro-4-O-beta-D-glucopyranosyl-beta-D-glucopyranose _chem_comp.type saccharide _chem_comp.formula "C12 H21 F O10" _chem_comp.pdbx_release_status REF_ONLY _chem_comp.formula_weight 344.288 _chem_comp.pdbx_type ? _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge ? _chem_comp.pdbx_initial_date ? _chem_comp.pdbx_modified_date ? _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag ? _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag ? _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_residue_numbering _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_polymer_type _chem_comp_atom.pdbx_ref_id _chem_comp_atom.pdbx_component_id _chem_comp_atom.pdbx_ordinal _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag PRD_900082 "C1'" C9 C 0 1 N N R 21.332 14.692 27.365 -3.972 0.533 -0.213 SHG 1 C1 polymer 1 1 1 ? ? ? PRD_900082 "C2'" C10 C 0 1 N N R 20.213 15.425 28.000 -2.808 1.516 -0.066 SHG 1 C2 polymer 1 1 2 ? ? ? PRD_900082 "C3'" C11 C 0 1 N N S 18.983 15.290 27.115 -1.539 0.884 -0.646 SHG 1 C3 polymer 1 1 3 ? ? ? PRD_900082 "C4'" C7 C 0 1 N N S 19.198 15.447 25.601 -1.271 -0.445 0.069 SHG 1 C4 polymer 1 1 4 ? ? ? PRD_900082 "C5'" C8 C 0 1 N N R 20.494 14.839 25.153 -2.494 -1.352 -0.083 SHG 1 C5 polymer 1 1 5 ? ? ? PRD_900082 "C6'" C12 C 0 1 N N N 20.872 15.393 23.783 -2.259 -2.658 0.678 SHG 1 C6 polymer 1 1 6 ? ? ? PRD_900082 "O1'" O5 O 0 1 N N N 22.518 14.910 28.100 -5.147 1.093 0.376 SHG 1 O1 polymer 1 1 7 ? ? ? PRD_900082 "O3'" O4 O 0 1 N N N 17.771 15.905 27.520 -0.431 1.765 -0.447 SHG 1 O3 polymer 1 1 8 ? ? ? PRD_900082 "O4'" O2 O 0 1 N N N 18.144 14.981 24.753 -0.131 -1.079 -0.514 SHG 1 O4 polymer 1 1 9 ? ? ? PRD_900082 "O5'" O3 O 0 1 N N N 21.568 15.193 26.040 -3.645 -0.692 0.447 SHG 1 O5 polymer 1 1 10 ? ? ? PRD_900082 "O6'" O6 O 0 1 N N N 20.945 16.825 23.790 -3.349 -3.551 0.441 SHG 1 O6 polymer 1 1 11 ? ? ? PRD_900082 F1 F1 F 0 1 N N N 19.929 14.971 29.304 -3.101 2.695 -0.760 SHG 1 F2 polymer 1 1 12 ? ? ? PRD_900082 C4 C5 C 0 1 N N R 16.619 15.283 22.994 2.241 -1.549 -0.516 BGC 2 C2 polymer 1 1 13 ? ? ? PRD_900082 C3 C4 C 0 1 N N S 15.502 16.160 22.453 3.574 -1.119 0.105 BGC 2 C3 polymer 1 1 14 ? ? ? PRD_900082 C2 C3 C 0 1 N N S 14.629 16.622 23.613 3.766 0.384 -0.116 BGC 2 C4 polymer 1 1 15 ? ? ? PRD_900082 C1 C2 C 0 1 N N R 15.475 17.219 24.707 2.575 1.137 0.485 BGC 2 C5 polymer 1 1 16 ? ? ? PRD_900082 C6 C1 C 0 1 N N N 14.640 17.796 25.873 2.730 2.635 0.216 BGC 2 C6 polymer 1 1 17 ? ? ? PRD_900082 C5 C6 C 0 1 N N S 17.328 15.922 24.160 1.110 -0.723 0.101 BGC 2 C1 polymer 1 1 18 ? ? ? PRD_900082 O4 O7 O 0 1 N N N 17.550 14.940 21.963 2.017 -2.936 -0.253 BGC 2 O2 polymer 1 1 19 ? ? ? PRD_900082 O3 O8 O 0 1 N N N 14.786 15.358 21.543 4.643 -1.834 -0.517 BGC 2 O3 polymer 1 1 20 ? ? ? PRD_900082 O2 O9 O 0 1 N N N 13.684 17.583 23.107 4.971 0.812 0.521 BGC 2 O4 polymer 1 1 21 ? ? ? PRD_900082 O5 O1 O 0 1 N N N 16.419 16.275 25.186 1.365 0.667 -0.113 BGC 2 O5 polymer 1 1 22 ? ? ? PRD_900082 O6 O10 O 0 1 N N N 13.882 16.730 26.461 1.681 3.348 0.875 BGC 2 O6 polymer 1 1 23 ? ? ? PRD_900082 H14 H14 H 0 1 N N N 21.094 13.619 27.327 -4.152 0.338 -1.270 SHG 1 H1 polymer 1 1 24 ? ? ? PRD_900082 H16 H16 H 0 1 N N N 20.480 16.491 28.040 -2.653 1.743 0.989 SHG 1 H2 polymer 1 1 25 ? ? ? PRD_900082 H18 H18 H 0 1 N N N 18.755 14.217 27.202 -1.674 0.703 -1.712 SHG 1 H3 polymer 1 1 26 ? ? ? PRD_900082 H10 H10 H 0 1 N N N 19.293 16.529 25.426 -1.084 -0.258 1.126 SHG 1 H4 polymer 1 1 27 ? ? ? PRD_900082 H12 H12 H 0 1 N N N 20.389 13.746 25.089 -2.656 -1.571 -1.139 SHG 1 H5 polymer 1 1 28 ? ? ? PRD_900082 H20 H20 H 0 1 N N N 20.114 15.079 23.050 -2.186 -2.448 1.745 SHG 1 H6 polymer 1 1 29 ? ? ? PRD_900082 H21 H21 H 0 1 N N N 21.853 14.988 23.493 -1.332 -3.117 0.335 SHG 1 H6A polymer 1 1 30 ? ? ? PRD_900082 H6 H6 H 0 1 N N N 17.658 15.796 28.457 -0.534 2.627 -0.873 SHG 1 HO3 polymer 1 1 31 ? ? ? PRD_900082 H11 H11 H 0 1 N N N 21.182 17.135 22.924 -3.266 -4.402 0.894 SHG 1 HO6 polymer 1 1 32 ? ? ? PRD_900082 H9 H9 H 0 1 N N N 22.404 14.591 28.988 -5.925 0.522 0.320 SHG 1 H11 polymer 1 1 33 ? ? ? PRD_900082 H7 H7 H 0 1 N N N 16.155 14.356 23.361 2.270 -1.382 -1.592 BGC 2 H2 polymer 1 1 34 ? ? ? PRD_900082 H5 H5 H 0 1 N N N 15.936 17.037 21.950 3.564 -1.333 1.174 BGC 2 H3 polymer 1 1 35 ? ? ? PRD_900082 H4 H4 H 0 1 N N N 14.092 15.751 24.016 3.825 0.591 -1.184 BGC 2 H4 polymer 1 1 36 ? ? ? PRD_900082 H3 H3 H 0 1 N N N 16.026 18.063 24.266 2.540 0.962 1.561 BGC 2 H5 polymer 1 1 37 ? ? ? PRD_900082 H1 H1 H 0 1 N N N 15.310 18.235 26.627 3.693 2.974 0.595 BGC 2 H6C1 polymer 1 1 38 ? ? ? PRD_900082 H2 H2 H 0 1 N N N 13.958 18.571 25.493 2.676 2.819 -0.857 BGC 2 H6C2 polymer 1 1 39 ? ? ? PRD_900082 H8 H8 H 0 1 N N N 17.898 16.797 23.816 1.055 -0.922 1.171 BGC 2 H1 polymer 1 1 40 ? ? ? PRD_900082 H13 H13 H 0 1 N N N 18.237 14.393 22.325 1.189 -3.277 -0.618 BGC 2 HB polymer 1 1 41 ? ? ? PRD_900082 H15 H15 H 0 1 N N N 14.070 15.861 21.172 4.582 -2.794 -0.423 BGC 2 HC polymer 1 1 42 ? ? ? PRD_900082 H17 H17 H 0 1 N N N 13.128 17.885 23.816 5.768 0.375 0.189 BGC 2 HD polymer 1 1 43 ? ? ? PRD_900082 H19 H19 H 0 1 N N N 13.363 17.069 27.180 1.716 4.305 0.748 BGC 2 H6 polymer 1 1 44 ? ? ? # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PRD_900082 O3 C3 SING N N 1 PRD_900082 O4 C4 SING N N 2 PRD_900082 C3 C4 SING N N 3 PRD_900082 C3 C2 SING N N 4 PRD_900082 C4 C5 SING N N 5 PRD_900082 O2 C2 SING N N 6 PRD_900082 C2 C1 SING N N 7 PRD_900082 "C6'" "O6'" SING N N 8 PRD_900082 "C6'" "C5'" SING N N 9 PRD_900082 C5 "O4'" SING N N 10 PRD_900082 C5 O5 SING N N 11 PRD_900082 C1 O5 SING N N 12 PRD_900082 C1 C6 SING N N 13 PRD_900082 "O4'" "C4'" SING N N 14 PRD_900082 "C5'" "C4'" SING N N 15 PRD_900082 "C5'" "O5'" SING N N 16 PRD_900082 "C4'" "C3'" SING N N 17 PRD_900082 C6 O6 SING N N 18 PRD_900082 "O5'" "C1'" SING N N 19 PRD_900082 "C3'" "O3'" SING N N 20 PRD_900082 "C3'" "C2'" SING N N 21 PRD_900082 "C1'" "C2'" SING N N 22 PRD_900082 "C1'" "O1'" SING N N 23 PRD_900082 "C2'" F1 SING N N 24 PRD_900082 C6 H1 SING N N 25 PRD_900082 C6 H2 SING N N 26 PRD_900082 C1 H3 SING N N 27 PRD_900082 C2 H4 SING N N 28 PRD_900082 C3 H5 SING N N 29 PRD_900082 "O3'" H6 SING N N 30 PRD_900082 C4 H7 SING N N 31 PRD_900082 C5 H8 SING N N 32 PRD_900082 "O1'" H9 SING N N 33 PRD_900082 "C4'" H10 SING N N 34 PRD_900082 "O6'" H11 SING N N 35 PRD_900082 "C5'" H12 SING N N 36 PRD_900082 O4 H13 SING N N 37 PRD_900082 "C1'" H14 SING N N 38 PRD_900082 O3 H15 SING N N 39 PRD_900082 "C2'" H16 SING N N 40 PRD_900082 O2 H17 SING N N 41 PRD_900082 "C3'" H18 SING N N 42 PRD_900082 O6 H19 SING N N 43 PRD_900082 "C6'" H20 SING N N 44 PRD_900082 "C6'" H21 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PRD_900082 SMILES ACDLabs 12.01 "C(O)C2OC(OC1C(O)C(F)C(OC1CO)O)C(C(C2O)O)O" PRD_900082 InChI InChI 1.03 ;InChI=1S/C12H21FO10/c13-5-7(17)10(4(2-15)21-11(5)20)23-12-9(19)8(18)6(16)3(1-14)22-12/h3-12,14-20H,1-2H2/t3-,4-,5-,6-,7 -,8+,9-,10-,11-,12+/m1/s1 ; PRD_900082 InChIKey InChI 1.03 CHZBROHNUFSPPZ-DZGNIOAVSA-N PRD_900082 SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](F)[C@H](O)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@@H]1O" PRD_900082 SMILES CACTVS 3.385 "OC[CH]1O[CH](O[CH]2[CH](O)[CH](F)[CH](O)O[CH]2CO)[CH](O)[CH](O)[CH]1O" PRD_900082 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O[C@@H]2[C@H](O[C@H]([C@@H]([C@H]2O)F)O)CO)O)O)O)O" PRD_900082 SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(C(C(C(O1)OC2C(OC(C(C2O)F)O)CO)O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PRD_900082 "SYSTEMATIC NAME" ACDLabs 12.01 2-deoxy-2-fluoro-4-O-beta-D-glucopyranosyl-beta-D-glucopyranose PRD_900082 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 ;(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{S},5~{R},6~{R})-5-fluoranyl-2-(hydroxymethyl)-4,6-bis(oxidanyl)oxan- 3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol ; #