data_PRD_001219 # _pdbx_reference_molecule.prd_id PRD_001219 _pdbx_reference_molecule.name "Lantibiotic 107891" _pdbx_reference_molecule.represent_as polymer _pdbx_reference_molecule.type Oligopeptide _pdbx_reference_molecule.type_evidence_code ? _pdbx_reference_molecule.class Antibiotic _pdbx_reference_molecule.class_evidence_code ? _pdbx_reference_molecule.formula "C94 H127 Cl N26 O26 S5" _pdbx_reference_molecule.formula_weight 2232.951 _pdbx_reference_molecule.chem_comp_id ? _pdbx_reference_molecule.release_status REL _pdbx_reference_molecule.replaces ? _pdbx_reference_molecule.replaced_by ? _pdbx_reference_molecule.compound_details "NAI-107 (LANTIBIOTIC 107891) IS A GLOBULAR TYPE B LANTIBIOTIC. THE LANTIBIOTICS ARE CHARACTERIZED BY THIOETHER AMINO ACIDS LANTHIONINE AND/OR METHYLLANTHIONINE. HERE, NAI-107 IS REPRESENTED BY THE SEQUENCE (SEQRES)" _pdbx_reference_molecule.description "NAI-107 IS A TETRACYCLIC PEPTIDE. POST TRANSLATIONAL MATURATION OF LANTIBIOTICS INVOLVES THE ENZYMIC CONVERSION OF THR, AND SER INTO DEHYDRATED AA AND THE FORMATION OF THIOETHER BONDS WITH CYSTEINE. THE CARBOXY-TERMINAL BETA-METHYLLANTHIONINE UNDERGOES DECARBOXYLATION. THIOETHER BONDS WITH CYSTEINE RESULT IN FOUR RINGS. THIS IS FOLLOWED BY MEMBRANE TRANSLOCATION AND CLEAVAGE OF THE MODIFIED PRECURSOR." _pdbx_reference_molecule.representative_PDB_id_code 2MH5 # _pdbx_reference_entity_list.prd_id PRD_001219 _pdbx_reference_entity_list.ref_entity_id 1 _pdbx_reference_entity_list.component_id 1 _pdbx_reference_entity_list.type polymer _pdbx_reference_entity_list.details ? # loop_ _pdbx_reference_entity_poly_link.prd_id _pdbx_reference_entity_poly_link.ref_entity_id _pdbx_reference_entity_poly_link.link_id _pdbx_reference_entity_poly_link.atom_id_1 _pdbx_reference_entity_poly_link.comp_id_1 _pdbx_reference_entity_poly_link.entity_seq_num_1 _pdbx_reference_entity_poly_link.atom_id_2 _pdbx_reference_entity_poly_link.comp_id_2 _pdbx_reference_entity_poly_link.entity_seq_num_2 _pdbx_reference_entity_poly_link.value_order _pdbx_reference_entity_poly_link.component_id _pdbx_reference_entity_poly_link.details _pdbx_reference_entity_poly_link.insert_code_1 _pdbx_reference_entity_poly_link.insert_code_2 PRD_001219 1 1 C VAL 1 N DBU 2 sing 1 ? ? ? PRD_001219 1 2 C DBU 2 N DAL 3 sing 1 ? ? ? PRD_001219 1 3 CB DAL 3 SG CYS 7 sing 1 ? ? ? PRD_001219 1 4 C DAL 3 N 5CW 4 sing 1 ? ? ? PRD_001219 1 5 C 5CW 4 N DHA 5 sing 1 ? ? ? PRD_001219 1 6 C DHA 5 N LEU 6 sing 1 ? ? ? PRD_001219 1 7 C LEU 6 N CYS 7 sing 1 ? ? ? PRD_001219 1 8 C CYS 7 N DBB 8 sing 1 ? ? ? PRD_001219 1 9 C DBB 8 N PRO 9 sing 1 ? ? ? PRD_001219 1 10 CB DBB 8 SG CYS 11 sing 1 ? ? ? PRD_001219 1 11 C PRO 9 N GLY 10 sing 1 ? ? ? PRD_001219 1 12 C GLY 10 N CYS 11 sing 1 ? ? ? PRD_001219 1 13 C CYS 11 N THR 12 sing 1 ? ? ? PRD_001219 1 14 C THR 12 N DAL 13 sing 1 ? ? ? PRD_001219 1 15 CB DAL 13 SG CYS 20 sing 1 ? ? ? PRD_001219 1 16 C DAL 13 N HYP 14 sing 1 ? ? ? PRD_001219 1 17 C HYP 14 N GLY 15 sing 1 ? ? ? PRD_001219 1 18 C GLY 15 N GLY 16 sing 1 ? ? ? PRD_001219 1 19 C GLY 16 N GLY 17 sing 1 ? ? ? PRD_001219 1 20 C GLY 17 N DAL 18 sing 1 ? ? ? PRD_001219 1 21 CB DAL 18 SG CYS 23 sing 1 ? ? ? PRD_001219 1 22 C DAL 18 N ASN 19 sing 1 ? ? ? PRD_001219 1 23 C ASN 19 N CYS 20 sing 1 ? ? ? PRD_001219 1 24 C CYS 20 N DAL 21 sing 1 ? ? ? PRD_001219 1 25 CB DAL 21 SG TEE 24 sing 1 ? ? ? PRD_001219 1 26 C DAL 21 N PHE 22 sing 1 ? ? ? PRD_001219 1 27 C PHE 22 N CYS 23 sing 1 ? ? ? PRD_001219 1 28 C CYS 23 N TEE 24 sing 1 ? ? ? # _pdbx_reference_entity_poly.prd_id PRD_001219 _pdbx_reference_entity_poly.ref_entity_id 1 _pdbx_reference_entity_poly.db_code P85065 _pdbx_reference_entity_poly.db_name UNP _pdbx_reference_entity_poly.type peptide-like # _pdbx_reference_entity_sequence.prd_id PRD_001219 _pdbx_reference_entity_sequence.ref_entity_id 1 _pdbx_reference_entity_sequence.type peptide-like _pdbx_reference_entity_sequence.NRP_flag N # loop_ _pdbx_reference_entity_poly_seq.prd_id _pdbx_reference_entity_poly_seq.ref_entity_id _pdbx_reference_entity_poly_seq.num _pdbx_reference_entity_poly_seq.mon_id _pdbx_reference_entity_poly_seq.parent_mon_id _pdbx_reference_entity_poly_seq.hetero _pdbx_reference_entity_poly_seq.observed PRD_001219 1 1 VAL VAL N Y PRD_001219 1 2 DBU THR N Y PRD_001219 1 3 DAL ? N Y PRD_001219 1 4 5CW TRP N Y PRD_001219 1 5 DHA SER N Y PRD_001219 1 6 LEU LEU N Y PRD_001219 1 7 CYS CYS N Y PRD_001219 1 8 DBB ? N Y PRD_001219 1 9 PRO PRO N Y PRD_001219 1 10 GLY GLY N Y PRD_001219 1 11 CYS CYS N Y PRD_001219 1 12 THR THR N Y PRD_001219 1 13 DAL ? N Y PRD_001219 1 14 HYP PRO N Y PRD_001219 1 15 GLY GLY N Y PRD_001219 1 16 GLY GLY N Y PRD_001219 1 17 GLY GLY N Y PRD_001219 1 18 DAL ? N Y PRD_001219 1 19 ASN ASN N Y PRD_001219 1 20 CYS CYS N Y PRD_001219 1 21 DAL ? N Y PRD_001219 1 22 PHE PHE N Y PRD_001219 1 23 CYS CYS N Y PRD_001219 1 24 TEE ? N Y # _pdbx_reference_entity_src_nat.prd_id PRD_001219 _pdbx_reference_entity_src_nat.ref_entity_id 1 _pdbx_reference_entity_src_nat.ordinal 1 _pdbx_reference_entity_src_nat.taxid 415003 _pdbx_reference_entity_src_nat.organism_scientific Microbispora _pdbx_reference_entity_src_nat.source ? _pdbx_reference_entity_src_nat.db_code P85065 _pdbx_reference_entity_src_nat.db_name UNP _pdbx_reference_entity_src_nat.strain ? # loop_ _pdbx_prd_audit.prd_id _pdbx_prd_audit.date _pdbx_prd_audit.processing_site _pdbx_prd_audit.action_type PRD_001219 2014-01-15 RCSB "Create molecule" PRD_001219 2014-03-05 RCSB "Initial release" #