data_160D # _entry.id 160D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 160D pdb_0000160d 10.2210/pdb160d/pdb RCSB ADJ049 ? ? WWPDB D_1000170138 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-05-18 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 160D _pdbx_database_status.recvd_initial_deposition_date 1994-02-10 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ramakrishnan, B.' 1 'Sundaralingam, M.' 2 # _citation.id primary _citation.title 'High resolution crystal structure of the A-DNA decamer d(CCCGGCCGGG). Novel intermolecular base-paired G*(G.C) triplets.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 231 _citation.page_first 431 _citation.page_last 444 _citation.year 1993 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 8510155 _citation.pdbx_database_id_DOI 10.1006/jmbi.1993.1292 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ramakrishnan, B.' 1 ? primary 'Sundaralingam, M.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*CP*GP*GP*CP*CP*GP*GP*G)-3') ; 3046.980 2 ? ? ? ? 2 water nat water 18.015 103 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DC)(DG)(DG)(DC)(DC)(DG)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCCGGCCGGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DC n 1 4 DG n 1 5 DG n 1 6 DC n 1 7 DC n 1 8 DG n 1 9 DG n 1 10 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DG 5 5 5 DG G A . n A 1 6 DC 6 6 6 DC C A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 DG 8 8 8 DG G A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n B 1 1 DC 1 11 11 DC C B . n B 1 2 DC 2 12 12 DC C B . n B 1 3 DC 3 13 13 DC C B . n B 1 4 DG 4 14 14 DG G B . n B 1 5 DG 5 15 15 DG G B . n B 1 6 DC 6 16 16 DC C B . n B 1 7 DC 7 17 17 DC C B . n B 1 8 DG 8 18 18 DG G B . n B 1 9 DG 9 19 19 DG G B . n B 1 10 DG 10 20 20 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 22 22 HOH HOH A . C 2 HOH 2 23 23 HOH HOH A . C 2 HOH 3 26 26 HOH HOH A . C 2 HOH 4 27 27 HOH HOH A . C 2 HOH 5 28 28 HOH HOH A . C 2 HOH 6 30 30 HOH HOH A . C 2 HOH 7 32 32 HOH HOH A . C 2 HOH 8 33 33 HOH HOH A . C 2 HOH 9 34 34 HOH HOH A . C 2 HOH 10 35 35 HOH HOH A . C 2 HOH 11 36 36 HOH HOH A . C 2 HOH 12 37 37 HOH HOH A . C 2 HOH 13 40 40 HOH HOH A . C 2 HOH 14 41 41 HOH HOH A . C 2 HOH 15 42 42 HOH HOH A . C 2 HOH 16 44 44 HOH HOH A . C 2 HOH 17 45 45 HOH HOH A . C 2 HOH 18 47 47 HOH HOH A . C 2 HOH 19 48 48 HOH HOH A . C 2 HOH 20 49 49 HOH HOH A . C 2 HOH 21 50 50 HOH HOH A . C 2 HOH 22 51 51 HOH HOH A . C 2 HOH 23 53 53 HOH HOH A . C 2 HOH 24 54 54 HOH HOH A . C 2 HOH 25 55 55 HOH HOH A . C 2 HOH 26 58 58 HOH HOH A . C 2 HOH 27 60 60 HOH HOH A . C 2 HOH 28 63 63 HOH HOH A . C 2 HOH 29 65 65 HOH HOH A . C 2 HOH 30 68 68 HOH HOH A . C 2 HOH 31 69 69 HOH HOH A . C 2 HOH 32 71 71 HOH HOH A . C 2 HOH 33 74 74 HOH HOH A . C 2 HOH 34 75 75 HOH HOH A . C 2 HOH 35 76 76 HOH HOH A . C 2 HOH 36 78 78 HOH HOH A . C 2 HOH 37 80 80 HOH HOH A . C 2 HOH 38 82 82 HOH HOH A . C 2 HOH 39 84 84 HOH HOH A . C 2 HOH 40 86 86 HOH HOH A . C 2 HOH 41 88 88 HOH HOH A . C 2 HOH 42 89 89 HOH HOH A . C 2 HOH 43 90 90 HOH HOH A . C 2 HOH 44 92 92 HOH HOH A . C 2 HOH 45 93 93 HOH HOH A . C 2 HOH 46 96 96 HOH HOH A . C 2 HOH 47 97 97 HOH HOH A . C 2 HOH 48 98 98 HOH HOH A . C 2 HOH 49 99 99 HOH HOH A . C 2 HOH 50 103 103 HOH HOH A . C 2 HOH 51 104 104 HOH HOH A . C 2 HOH 52 108 108 HOH HOH A . C 2 HOH 53 110 110 HOH HOH A . C 2 HOH 54 112 112 HOH HOH A . C 2 HOH 55 115 115 HOH HOH A . C 2 HOH 56 116 116 HOH HOH A . C 2 HOH 57 117 117 HOH HOH A . C 2 HOH 58 118 118 HOH HOH A . C 2 HOH 59 119 119 HOH HOH A . C 2 HOH 60 120 120 HOH HOH A . C 2 HOH 61 121 121 HOH HOH A . C 2 HOH 62 122 122 HOH HOH A . D 2 HOH 1 21 21 HOH HOH B . D 2 HOH 2 24 24 HOH HOH B . D 2 HOH 3 25 25 HOH HOH B . D 2 HOH 4 29 29 HOH HOH B . D 2 HOH 5 31 31 HOH HOH B . D 2 HOH 6 38 38 HOH HOH B . D 2 HOH 7 39 39 HOH HOH B . D 2 HOH 8 43 43 HOH HOH B . D 2 HOH 9 46 46 HOH HOH B . D 2 HOH 10 52 52 HOH HOH B . D 2 HOH 11 56 56 HOH HOH B . D 2 HOH 12 57 57 HOH HOH B . D 2 HOH 13 59 59 HOH HOH B . D 2 HOH 14 61 61 HOH HOH B . D 2 HOH 15 62 62 HOH HOH B . D 2 HOH 16 64 64 HOH HOH B . D 2 HOH 17 66 66 HOH HOH B . D 2 HOH 18 67 67 HOH HOH B . D 2 HOH 19 70 70 HOH HOH B . D 2 HOH 20 72 72 HOH HOH B . D 2 HOH 21 73 73 HOH HOH B . D 2 HOH 22 77 77 HOH HOH B . D 2 HOH 23 79 79 HOH HOH B . D 2 HOH 24 81 81 HOH HOH B . D 2 HOH 25 83 83 HOH HOH B . D 2 HOH 26 85 85 HOH HOH B . D 2 HOH 27 87 87 HOH HOH B . D 2 HOH 28 91 91 HOH HOH B . D 2 HOH 29 94 94 HOH HOH B . D 2 HOH 30 95 95 HOH HOH B . D 2 HOH 31 100 100 HOH HOH B . D 2 HOH 32 101 101 HOH HOH B . D 2 HOH 33 102 102 HOH HOH B . D 2 HOH 34 105 105 HOH HOH B . D 2 HOH 35 106 106 HOH HOH B . D 2 HOH 36 107 107 HOH HOH B . D 2 HOH 37 109 109 HOH HOH B . D 2 HOH 38 111 111 HOH HOH B . D 2 HOH 39 113 113 HOH HOH B . D 2 HOH 40 114 114 HOH HOH B . D 2 HOH 41 123 123 HOH HOH B . # _software.name NUCLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 160D _cell.length_a 24.880 _cell.length_b 44.600 _cell.length_c 46.970 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 160D _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 160D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.47 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details 'ROOM TEMPERATURE' _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_details 'pH 7.00, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 'NA CACODYLATE' ? ? ? 1 4 1 SPERMINE_HCL ? ? ? 1 5 2 WATER ? ? ? 1 6 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details 'ROOM TEMPERATURE' _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS-NICOLET _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 160D _reflns.observed_criterion_sigma_I 2.500 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 8.0 _reflns.d_resolution_high 1.65 _reflns.number_obs 6033 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 160D _refine.ls_number_reflns_obs 6033 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 2.500 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 1.650 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1850000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 404 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 103 _refine_hist.number_atoms_total 507 _refine_hist.d_res_high 1.650 _refine_hist.d_res_low 8.000 # _database_PDB_matrix.entry_id 160D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 160D _struct.title 'HIGH RESOLUTION CRYSTAL STRUCTURE OF THE A-DNA DECAMER D(CCCGGCCGGG): NOVEL INTERMOLECULAR BASE-PAIRED G*(G.C) TRIPLETS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 160D _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 160D _struct_ref.pdbx_db_accession 160D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 160D A 1 ? 10 ? 160D 1 ? 10 ? 1 10 2 1 160D B 1 ? 10 ? 160D 11 ? 20 ? 11 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 8 N1 ? ? A DC 3 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 8 O6 ? ? A DC 3 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 8 N2 ? ? A DC 3 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DG 5 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 6 O2 ? ? A DG 5 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DG 5 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 5 N1 ? ? A DC 6 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 5 O6 ? ? A DC 6 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 5 N2 ? ? A DC 6 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 7 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 7 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 7 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 8 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 8 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 8 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OP1 _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 DC _pdbx_validate_symm_contact.auth_seq_id_1 13 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 45 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_554 _pdbx_validate_symm_contact.dist 1.99 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" A DC 1 ? ? P A DC 2 ? ? 1.502 1.607 -0.105 0.012 Y 2 1 P A DC 2 ? ? "O5'" A DC 2 ? ? 1.656 1.593 0.063 0.010 N 3 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? 1.502 1.420 0.082 0.011 N 4 1 N3 A DC 2 ? ? C4 A DC 2 ? ? 1.394 1.335 0.059 0.007 N 5 1 C4 A DC 2 ? ? C5 A DC 2 ? ? 1.349 1.425 -0.076 0.008 N 6 1 P A DG 4 ? ? "O5'" A DG 4 ? ? 1.735 1.593 0.142 0.010 N 7 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? 1.489 1.420 0.069 0.011 N 8 1 C6 A DG 4 ? ? N1 A DG 4 ? ? 1.335 1.391 -0.056 0.007 N 9 1 N7 A DG 4 ? ? C8 A DG 4 ? ? 1.347 1.305 0.042 0.006 N 10 1 C4 A DG 5 ? ? C5 A DG 5 ? ? 1.317 1.379 -0.062 0.007 N 11 1 P A DC 7 ? ? "O5'" A DC 7 ? ? 1.681 1.593 0.088 0.010 N 12 1 N3 A DC 7 ? ? C4 A DC 7 ? ? 1.406 1.335 0.071 0.007 N 13 1 P A DG 8 ? ? "O5'" A DG 8 ? ? 1.669 1.593 0.076 0.010 N 14 1 "C5'" A DG 8 ? ? "C4'" A DG 8 ? ? 1.442 1.509 -0.067 0.011 N 15 1 "C2'" A DG 8 ? ? "C1'" A DG 8 ? ? 1.598 1.519 0.079 0.010 N 16 1 N7 A DG 8 ? ? C8 A DG 8 ? ? 1.364 1.305 0.059 0.006 N 17 1 "C5'" A DG 9 ? ? "C4'" A DG 9 ? ? 1.556 1.512 0.044 0.007 N 18 1 "C2'" A DG 9 ? ? "C1'" A DG 9 ? ? 1.457 1.518 -0.061 0.010 N 19 1 "O3'" A DG 9 ? ? P A DG 10 ? ? 1.720 1.607 0.113 0.012 Y 20 1 P A DG 10 ? ? "O5'" A DG 10 ? ? 1.733 1.593 0.140 0.010 N 21 1 C5 A DG 10 ? ? N7 A DG 10 ? ? 1.435 1.388 0.047 0.006 N 22 1 N3 B DC 11 ? ? C4 B DC 11 ? ? 1.379 1.335 0.044 0.007 N 23 1 C4 B DC 12 ? ? C5 B DC 12 ? ? 1.475 1.425 0.050 0.008 N 24 1 "O3'" B DC 12 ? ? P B DC 13 ? ? 1.526 1.607 -0.081 0.012 Y 25 1 P B DC 13 ? ? "O5'" B DC 13 ? ? 1.706 1.593 0.113 0.010 N 26 1 N1 B DC 13 ? ? C6 B DC 13 ? ? 1.411 1.367 0.044 0.006 N 27 1 P B DG 14 ? ? "O5'" B DG 14 ? ? 1.691 1.593 0.098 0.010 N 28 1 P B DG 15 ? ? "O5'" B DG 15 ? ? 1.506 1.593 -0.087 0.010 N 29 1 C6 B DG 15 ? ? N1 B DG 15 ? ? 1.335 1.391 -0.056 0.007 N 30 1 C5 B DG 15 ? ? N7 B DG 15 ? ? 1.450 1.388 0.062 0.006 N 31 1 P B DG 18 ? ? "O5'" B DG 18 ? ? 1.784 1.593 0.191 0.010 N 32 1 C5 B DG 18 ? ? C6 B DG 18 ? ? 1.324 1.419 -0.095 0.010 N 33 1 C5 B DG 18 ? ? N7 B DG 18 ? ? 1.447 1.388 0.059 0.006 N 34 1 C6 B DG 18 ? ? O6 B DG 18 ? ? 1.294 1.237 0.057 0.009 N 35 1 C5 B DG 19 ? ? N7 B DG 19 ? ? 1.433 1.388 0.045 0.006 N 36 1 N9 B DG 19 ? ? C4 B DG 19 ? ? 1.310 1.375 -0.065 0.008 N 37 1 "O3'" B DG 19 ? ? P B DG 20 ? ? 1.700 1.607 0.093 0.012 Y 38 1 C5 B DG 20 ? ? N7 B DG 20 ? ? 1.426 1.388 0.038 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? "C3'" A DC 1 ? ? 99.45 104.50 -5.05 0.40 N 2 1 "C5'" A DC 1 ? ? "C4'" A DC 1 ? ? "O4'" A DC 1 ? ? 120.50 109.80 10.70 1.10 N 3 1 "C1'" A DC 1 ? ? "O4'" A DC 1 ? ? "C4'" A DC 1 ? ? 114.92 110.30 4.62 0.70 N 4 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.85 108.30 3.55 0.30 N 5 1 "O4'" A DC 2 ? ? "C1'" A DC 2 ? ? N1 A DC 2 ? ? 110.61 108.30 2.31 0.30 N 6 1 N3 A DC 2 ? ? C4 A DC 2 ? ? C5 A DC 2 ? ? 118.87 121.90 -3.03 0.40 N 7 1 C4 A DC 2 ? ? C5 A DC 2 ? ? C6 A DC 2 ? ? 122.94 117.40 5.54 0.50 N 8 1 C5 A DC 2 ? ? C6 A DC 2 ? ? N1 A DC 2 ? ? 117.29 121.00 -3.71 0.50 N 9 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 113.59 121.90 -8.31 0.70 N 10 1 C5 A DC 2 ? ? C4 A DC 2 ? ? N4 A DC 2 ? ? 125.07 120.20 4.87 0.70 N 11 1 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DC 3 ? ? 131.81 119.70 12.11 1.20 Y 12 1 C2 A DC 3 ? ? N1 A DC 3 ? ? "C1'" A DC 3 ? ? 111.26 118.80 -7.54 1.10 N 13 1 "O3'" A DC 3 ? ? P A DG 4 ? ? OP1 A DG 4 ? ? 117.95 110.50 7.45 1.10 Y 14 1 P A DG 4 ? ? "O5'" A DG 4 ? ? "C5'" A DG 4 ? ? 108.57 120.90 -12.33 1.60 N 15 1 "C4'" A DG 4 ? ? "C3'" A DG 4 ? ? "C2'" A DG 4 ? ? 97.09 102.20 -5.11 0.70 N 16 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 102.61 108.00 -5.39 0.70 N 17 1 C2 A DG 4 ? ? N3 A DG 4 ? ? C4 A DG 4 ? ? 106.92 111.90 -4.98 0.50 N 18 1 N3 A DG 4 ? ? C4 A DG 4 ? ? N9 A DG 4 ? ? 120.19 126.00 -5.81 0.60 N 19 1 N3 A DG 4 ? ? C2 A DG 4 ? ? N2 A DG 4 ? ? 113.12 119.90 -6.78 0.70 N 20 1 N1 A DG 4 ? ? C6 A DG 4 ? ? O6 A DG 4 ? ? 110.98 119.90 -8.92 0.60 N 21 1 C5 A DG 4 ? ? C6 A DG 4 ? ? O6 A DG 4 ? ? 134.95 128.60 6.35 0.60 N 22 1 "O5'" A DG 5 ? ? "C5'" A DG 5 ? ? "C4'" A DG 5 ? ? 98.85 109.40 -10.55 0.80 N 23 1 P A DG 5 ? ? "O5'" A DG 5 ? ? "C5'" A DG 5 ? ? 110.85 120.90 -10.05 1.60 N 24 1 "O4'" A DG 5 ? ? "C4'" A DG 5 ? ? "C3'" A DG 5 ? ? 101.65 104.50 -2.85 0.40 N 25 1 C6 A DG 5 ? ? N1 A DG 5 ? ? C2 A DG 5 ? ? 120.61 125.10 -4.49 0.60 N 26 1 C4 A DG 5 ? ? C5 A DG 5 ? ? N7 A DG 5 ? ? 108.05 110.80 -2.75 0.40 N 27 1 N9 A DG 5 ? ? C4 A DG 5 ? ? C5 A DG 5 ? ? 109.68 105.40 4.28 0.40 N 28 1 N3 A DG 5 ? ? C4 A DG 5 ? ? N9 A DG 5 ? ? 120.07 126.00 -5.93 0.60 N 29 1 N3 A DG 5 ? ? C2 A DG 5 ? ? N2 A DG 5 ? ? 112.92 119.90 -6.98 0.70 N 30 1 N1 A DG 5 ? ? C6 A DG 5 ? ? O6 A DG 5 ? ? 113.17 119.90 -6.73 0.60 N 31 1 "C3'" A DG 5 ? ? "O3'" A DG 5 ? ? P A DC 6 ? ? 131.49 119.70 11.79 1.20 Y 32 1 "O5'" A DC 6 ? ? "C5'" A DC 6 ? ? "C4'" A DC 6 ? ? 100.61 109.40 -8.79 0.80 N 33 1 "C4'" A DC 6 ? ? "C3'" A DC 6 ? ? "C2'" A DC 6 ? ? 96.82 102.20 -5.38 0.70 N 34 1 N3 A DC 6 ? ? C4 A DC 6 ? ? C5 A DC 6 ? ? 117.91 121.90 -3.99 0.40 N 35 1 C4 A DC 6 ? ? C5 A DC 6 ? ? C6 A DC 6 ? ? 120.82 117.40 3.42 0.50 N 36 1 N1 A DC 6 ? ? C2 A DC 6 ? ? O2 A DC 6 ? ? 124.38 118.90 5.48 0.60 N 37 1 C5 A DC 6 ? ? C4 A DC 6 ? ? N4 A DC 6 ? ? 125.15 120.20 4.95 0.70 N 38 1 C2 A DC 6 ? ? N1 A DC 6 ? ? "C1'" A DC 6 ? ? 111.72 118.80 -7.08 1.10 N 39 1 "O5'" A DC 7 ? ? "C5'" A DC 7 ? ? "C4'" A DC 7 ? ? 101.85 109.40 -7.55 0.80 N 40 1 N3 A DC 7 ? ? C4 A DC 7 ? ? C5 A DC 7 ? ? 118.26 121.90 -3.64 0.40 N 41 1 C4 A DC 7 ? ? C5 A DC 7 ? ? C6 A DC 7 ? ? 121.72 117.40 4.32 0.50 N 42 1 N1 A DC 7 ? ? C2 A DC 7 ? ? O2 A DC 7 ? ? 123.73 118.90 4.83 0.60 N 43 1 N3 A DC 7 ? ? C2 A DC 7 ? ? O2 A DC 7 ? ? 115.33 121.90 -6.57 0.70 N 44 1 C5 A DC 7 ? ? C4 A DC 7 ? ? N4 A DC 7 ? ? 125.43 120.20 5.23 0.70 N 45 1 "O3'" A DC 7 ? ? P A DG 8 ? ? "O5'" A DG 8 ? ? 119.42 104.00 15.42 1.90 Y 46 1 "O5'" A DG 8 ? ? P A DG 8 ? ? OP2 A DG 8 ? ? 92.72 105.70 -12.98 0.90 N 47 1 P A DG 8 ? ? "O5'" A DG 8 ? ? "C5'" A DG 8 ? ? 100.88 120.90 -20.02 1.60 N 48 1 C4 A DG 8 ? ? C5 A DG 8 ? ? N7 A DG 8 ? ? 114.01 110.80 3.21 0.40 N 49 1 C5 A DG 8 ? ? N7 A DG 8 ? ? C8 A DG 8 ? ? 100.47 104.30 -3.83 0.50 N 50 1 "C4'" A DG 9 ? ? "C3'" A DG 9 ? ? "C2'" A DG 9 ? ? 96.18 102.20 -6.02 0.70 N 51 1 C4 A DG 9 ? ? C5 A DG 9 ? ? C6 A DG 9 ? ? 114.44 118.80 -4.36 0.60 N 52 1 C4 A DG 9 ? ? C5 A DG 9 ? ? N7 A DG 9 ? ? 114.70 110.80 3.90 0.40 N 53 1 C5 A DG 9 ? ? N7 A DG 9 ? ? C8 A DG 9 ? ? 100.68 104.30 -3.62 0.50 N 54 1 N3 A DG 9 ? ? C2 A DG 9 ? ? N2 A DG 9 ? ? 115.58 119.90 -4.32 0.70 N 55 1 C8 A DG 9 ? ? N9 A DG 9 ? ? "C1'" A DG 9 ? ? 135.45 127.00 8.45 1.30 N 56 1 "C3'" A DG 9 ? ? "O3'" A DG 9 ? ? P A DG 10 ? ? 109.29 119.70 -10.41 1.20 Y 57 1 "O3'" A DG 9 ? ? P A DG 10 ? ? OP1 A DG 10 ? ? 91.06 105.20 -14.14 2.20 Y 58 1 OP1 A DG 10 ? ? P A DG 10 ? ? OP2 A DG 10 ? ? 152.15 119.60 32.55 1.50 N 59 1 "O5'" A DG 10 ? ? P A DG 10 ? ? OP1 A DG 10 ? ? 88.28 105.70 -17.42 0.90 N 60 1 "O5'" A DG 10 ? ? "C5'" A DG 10 ? ? "C4'" A DG 10 ? ? 100.18 109.40 -9.22 0.80 N 61 1 "C5'" A DG 10 ? ? "C4'" A DG 10 ? ? "O4'" A DG 10 ? ? 117.14 109.80 7.34 1.10 N 62 1 "C4'" A DG 10 ? ? "C3'" A DG 10 ? ? "C2'" A DG 10 ? ? 96.66 102.20 -5.54 0.70 N 63 1 C2 A DG 10 ? ? N3 A DG 10 ? ? C4 A DG 10 ? ? 107.53 111.90 -4.37 0.50 N 64 1 C5 A DG 10 ? ? N7 A DG 10 ? ? C8 A DG 10 ? ? 99.67 104.30 -4.63 0.50 N 65 1 N7 A DG 10 ? ? C8 A DG 10 ? ? N9 A DG 10 ? ? 118.93 113.10 5.83 0.50 N 66 1 C8 A DG 10 ? ? N9 A DG 10 ? ? C4 A DG 10 ? ? 102.58 106.40 -3.82 0.40 N 67 1 N1 A DG 10 ? ? C6 A DG 10 ? ? O6 A DG 10 ? ? 124.28 119.90 4.38 0.60 N 68 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 112.56 108.30 4.26 0.30 N 69 1 C6 B DC 11 ? ? N1 B DC 11 ? ? C2 B DC 11 ? ? 117.46 120.30 -2.84 0.40 N 70 1 C5 B DC 11 ? ? C6 B DC 11 ? ? N1 B DC 11 ? ? 125.55 121.00 4.55 0.50 N 71 1 "O5'" B DC 12 ? ? P B DC 12 ? ? OP1 B DC 12 ? ? 99.10 105.70 -6.60 0.90 N 72 1 "O5'" B DC 12 ? ? P B DC 12 ? ? OP2 B DC 12 ? ? 121.80 110.70 11.10 1.20 N 73 1 P B DC 12 ? ? "O5'" B DC 12 ? ? "C5'" B DC 12 ? ? 133.24 120.90 12.34 1.60 N 74 1 C4 B DC 12 ? ? C5 B DC 12 ? ? C6 B DC 12 ? ? 113.22 117.40 -4.18 0.50 N 75 1 C5 B DC 12 ? ? C6 B DC 12 ? ? N1 B DC 12 ? ? 124.53 121.00 3.53 0.50 N 76 1 "O5'" B DC 13 ? ? "C5'" B DC 13 ? ? "C4'" B DC 13 ? ? 99.47 109.40 -9.93 0.80 N 77 1 P B DC 13 ? ? "O5'" B DC 13 ? ? "C5'" B DC 13 ? ? 110.36 120.90 -10.54 1.60 N 78 1 "O4'" B DC 13 ? ? "C4'" B DC 13 ? ? "C3'" B DC 13 ? ? 99.76 104.50 -4.74 0.40 N 79 1 C6 B DC 13 ? ? N1 B DC 13 ? ? C2 B DC 13 ? ? 115.57 120.30 -4.73 0.40 N 80 1 N3 B DC 13 ? ? C4 B DC 13 ? ? C5 B DC 13 ? ? 117.83 121.90 -4.07 0.40 N 81 1 C5 B DC 13 ? ? C6 B DC 13 ? ? N1 B DC 13 ? ? 125.03 121.00 4.03 0.50 N 82 1 OP1 B DG 14 ? ? P B DG 14 ? ? OP2 B DG 14 ? ? 133.15 119.60 13.55 1.50 N 83 1 "O5'" B DG 14 ? ? P B DG 14 ? ? OP2 B DG 14 ? ? 96.97 105.70 -8.73 0.90 N 84 1 N3 B DG 14 ? ? C4 B DG 14 ? ? C5 B DG 14 ? ? 125.48 128.60 -3.12 0.50 N 85 1 N3 B DG 14 ? ? C2 B DG 14 ? ? N2 B DG 14 ? ? 112.86 119.90 -7.04 0.70 N 86 1 N1 B DG 14 ? ? C6 B DG 14 ? ? O6 B DG 14 ? ? 111.52 119.90 -8.38 0.60 N 87 1 C5 B DG 14 ? ? C6 B DG 14 ? ? O6 B DG 14 ? ? 134.87 128.60 6.27 0.60 N 88 1 "O3'" B DG 14 ? ? P B DG 15 ? ? OP1 B DG 15 ? ? 90.93 105.20 -14.27 2.20 Y 89 1 OP1 B DG 15 ? ? P B DG 15 ? ? OP2 B DG 15 ? ? 107.51 119.60 -12.09 1.50 N 90 1 "O5'" B DG 15 ? ? P B DG 15 ? ? OP2 B DG 15 ? ? 119.41 110.70 8.71 1.20 N 91 1 "O5'" B DG 15 ? ? "C5'" B DG 15 ? ? "C4'" B DG 15 ? ? 102.42 109.40 -6.98 0.80 N 92 1 "C3'" B DG 15 ? ? "C2'" B DG 15 ? ? "C1'" B DG 15 ? ? 97.47 102.40 -4.93 0.80 N 93 1 C6 B DG 15 ? ? N1 B DG 15 ? ? C2 B DG 15 ? ? 120.99 125.10 -4.11 0.60 N 94 1 C5 B DG 15 ? ? C6 B DG 15 ? ? N1 B DG 15 ? ? 117.21 111.50 5.71 0.50 N 95 1 C4 B DG 15 ? ? C5 B DG 15 ? ? N7 B DG 15 ? ? 107.93 110.80 -2.87 0.40 N 96 1 C6 B DG 15 ? ? C5 B DG 15 ? ? N7 B DG 15 ? ? 135.08 130.40 4.68 0.60 N 97 1 C5 B DG 15 ? ? C6 B DG 15 ? ? O6 B DG 15 ? ? 123.84 128.60 -4.76 0.60 N 98 1 "O5'" B DC 16 ? ? "C5'" B DC 16 ? ? "C4'" B DC 16 ? ? 104.36 109.40 -5.04 0.80 N 99 1 P B DC 16 ? ? "O5'" B DC 16 ? ? "C5'" B DC 16 ? ? 109.96 120.90 -10.94 1.60 N 100 1 C6 B DC 16 ? ? N1 B DC 16 ? ? C2 B DC 16 ? ? 123.32 120.30 3.02 0.40 N 101 1 N1 B DC 16 ? ? C2 B DC 16 ? ? O2 B DC 16 ? ? 124.04 118.90 5.14 0.60 N 102 1 OP1 B DC 17 ? ? P B DC 17 ? ? OP2 B DC 17 ? ? 130.46 119.60 10.86 1.50 N 103 1 P B DC 17 ? ? "O5'" B DC 17 ? ? "C5'" B DC 17 ? ? 107.26 120.90 -13.64 1.60 N 104 1 N3 B DC 17 ? ? C4 B DC 17 ? ? C5 B DC 17 ? ? 124.40 121.90 2.50 0.40 N 105 1 C4 B DC 17 ? ? C5 B DC 17 ? ? C6 B DC 17 ? ? 113.71 117.40 -3.69 0.50 N 106 1 OP1 B DG 18 ? ? P B DG 18 ? ? OP2 B DG 18 ? ? 133.83 119.60 14.23 1.50 N 107 1 "O5'" B DG 18 ? ? P B DG 18 ? ? OP2 B DG 18 ? ? 90.04 105.70 -15.66 0.90 N 108 1 P B DG 18 ? ? "O5'" B DG 18 ? ? "C5'" B DG 18 ? ? 109.45 120.90 -11.45 1.60 N 109 1 "O4'" B DG 18 ? ? "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? 100.76 104.50 -3.74 0.40 N 110 1 "C4'" B DG 18 ? ? "C3'" B DG 18 ? ? "C2'" B DG 18 ? ? 95.35 102.20 -6.85 0.70 N 111 1 "O4'" B DG 18 ? ? "C1'" B DG 18 ? ? N9 B DG 18 ? ? 102.78 108.00 -5.22 0.70 N 112 1 C6 B DG 18 ? ? N1 B DG 18 ? ? C2 B DG 18 ? ? 114.28 125.10 -10.82 0.60 N 113 1 N1 B DG 18 ? ? C2 B DG 18 ? ? N3 B DG 18 ? ? 129.28 123.90 5.38 0.60 N 114 1 N3 B DG 18 ? ? C4 B DG 18 ? ? C5 B DG 18 ? ? 123.43 128.60 -5.17 0.50 N 115 1 C4 B DG 18 ? ? C5 B DG 18 ? ? C6 B DG 18 ? ? 124.56 118.80 5.76 0.60 N 116 1 C5 B DG 18 ? ? C6 B DG 18 ? ? N1 B DG 18 ? ? 115.48 111.50 3.98 0.50 N 117 1 C4 B DG 18 ? ? C5 B DG 18 ? ? N7 B DG 18 ? ? 108.30 110.80 -2.50 0.40 N 118 1 C6 B DG 18 ? ? C5 B DG 18 ? ? N7 B DG 18 ? ? 126.21 130.40 -4.19 0.60 N 119 1 N1 B DG 18 ? ? C2 B DG 18 ? ? N2 B DG 18 ? ? 108.30 116.20 -7.90 0.90 N 120 1 N1 B DG 18 ? ? C6 B DG 18 ? ? O6 B DG 18 ? ? 109.99 119.90 -9.91 0.60 N 121 1 C5 B DG 18 ? ? C6 B DG 18 ? ? O6 B DG 18 ? ? 132.78 128.60 4.18 0.60 N 122 1 "C3'" B DG 18 ? ? "O3'" B DG 18 ? ? P B DG 19 ? ? 128.07 119.70 8.37 1.20 Y 123 1 "O4'" B DG 19 ? ? "C4'" B DG 19 ? ? "C3'" B DG 19 ? ? 100.22 104.50 -4.28 0.40 N 124 1 "C4'" B DG 19 ? ? "C3'" B DG 19 ? ? "C2'" B DG 19 ? ? 97.26 102.20 -4.94 0.70 N 125 1 C2 B DG 19 ? ? N3 B DG 19 ? ? C4 B DG 19 ? ? 108.02 111.90 -3.88 0.50 N 126 1 C5 B DG 19 ? ? N7 B DG 19 ? ? C8 B DG 19 ? ? 98.38 104.30 -5.92 0.50 N 127 1 N7 B DG 19 ? ? C8 B DG 19 ? ? N9 B DG 19 ? ? 116.10 113.10 3.00 0.50 N 128 1 C8 B DG 19 ? ? N9 B DG 19 ? ? C4 B DG 19 ? ? 103.24 106.40 -3.16 0.40 N 129 1 N9 B DG 19 ? ? C4 B DG 19 ? ? C5 B DG 19 ? ? 109.88 105.40 4.48 0.40 N 130 1 N3 B DG 19 ? ? C4 B DG 19 ? ? N9 B DG 19 ? ? 118.66 126.00 -7.34 0.60 N 131 1 N3 B DG 19 ? ? C2 B DG 19 ? ? N2 B DG 19 ? ? 115.31 119.90 -4.59 0.70 N 132 1 "O5'" B DG 20 ? ? P B DG 20 ? ? OP2 B DG 20 ? ? 125.08 110.70 14.38 1.20 N 133 1 "O5'" B DG 20 ? ? "C5'" B DG 20 ? ? "C4'" B DG 20 ? ? 99.92 109.40 -9.48 0.80 N 134 1 P B DG 20 ? ? "O5'" B DG 20 ? ? "C5'" B DG 20 ? ? 131.99 120.90 11.09 1.60 N 135 1 "O4'" B DG 20 ? ? "C4'" B DG 20 ? ? "C3'" B DG 20 ? ? 98.31 104.50 -6.19 0.40 N 136 1 "C4'" B DG 20 ? ? "C3'" B DG 20 ? ? "C2'" B DG 20 ? ? 97.17 102.20 -5.03 0.70 N 137 1 "O4'" B DG 20 ? ? "C1'" B DG 20 ? ? N9 B DG 20 ? ? 103.17 108.00 -4.83 0.70 N 138 1 C4 B DG 20 ? ? C5 B DG 20 ? ? N7 B DG 20 ? ? 103.73 110.80 -7.07 0.40 N 139 1 C5 B DG 20 ? ? N7 B DG 20 ? ? C8 B DG 20 ? ? 108.98 104.30 4.68 0.50 N 140 1 N7 B DG 20 ? ? C8 B DG 20 ? ? N9 B DG 20 ? ? 109.67 113.10 -3.43 0.50 N 141 1 N9 B DG 20 ? ? C4 B DG 20 ? ? C5 B DG 20 ? ? 108.17 105.40 2.77 0.40 N 142 1 C6 B DG 20 ? ? C5 B DG 20 ? ? N7 B DG 20 ? ? 137.33 130.40 6.93 0.60 N 143 1 N3 B DG 20 ? ? C2 B DG 20 ? ? N2 B DG 20 ? ? 114.27 119.90 -5.63 0.70 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DC _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 12 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.079 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DC OP3 O N N 1 DC P P N N 2 DC OP1 O N N 3 DC OP2 O N N 4 DC "O5'" O N N 5 DC "C5'" C N N 6 DC "C4'" C N R 7 DC "O4'" O N N 8 DC "C3'" C N S 9 DC "O3'" O N N 10 DC "C2'" C N N 11 DC "C1'" C N R 12 DC N1 N N N 13 DC C2 C N N 14 DC O2 O N N 15 DC N3 N N N 16 DC C4 C N N 17 DC N4 N N N 18 DC C5 C N N 19 DC C6 C N N 20 DC HOP3 H N N 21 DC HOP2 H N N 22 DC "H5'" H N N 23 DC "H5''" H N N 24 DC "H4'" H N N 25 DC "H3'" H N N 26 DC "HO3'" H N N 27 DC "H2'" H N N 28 DC "H2''" H N N 29 DC "H1'" H N N 30 DC H41 H N N 31 DC H42 H N N 32 DC H5 H N N 33 DC H6 H N N 34 DG OP3 O N N 35 DG P P N N 36 DG OP1 O N N 37 DG OP2 O N N 38 DG "O5'" O N N 39 DG "C5'" C N N 40 DG "C4'" C N R 41 DG "O4'" O N N 42 DG "C3'" C N S 43 DG "O3'" O N N 44 DG "C2'" C N N 45 DG "C1'" C N R 46 DG N9 N Y N 47 DG C8 C Y N 48 DG N7 N Y N 49 DG C5 C Y N 50 DG C6 C N N 51 DG O6 O N N 52 DG N1 N N N 53 DG C2 C N N 54 DG N2 N N N 55 DG N3 N N N 56 DG C4 C Y N 57 DG HOP3 H N N 58 DG HOP2 H N N 59 DG "H5'" H N N 60 DG "H5''" H N N 61 DG "H4'" H N N 62 DG "H3'" H N N 63 DG "HO3'" H N N 64 DG "H2'" H N N 65 DG "H2''" H N N 66 DG "H1'" H N N 67 DG H8 H N N 68 DG H1 H N N 69 DG H21 H N N 70 DG H22 H N N 71 HOH O O N N 72 HOH H1 H N N 73 HOH H2 H N N 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DC OP3 P sing N N 1 DC OP3 HOP3 sing N N 2 DC P OP1 doub N N 3 DC P OP2 sing N N 4 DC P "O5'" sing N N 5 DC OP2 HOP2 sing N N 6 DC "O5'" "C5'" sing N N 7 DC "C5'" "C4'" sing N N 8 DC "C5'" "H5'" sing N N 9 DC "C5'" "H5''" sing N N 10 DC "C4'" "O4'" sing N N 11 DC "C4'" "C3'" sing N N 12 DC "C4'" "H4'" sing N N 13 DC "O4'" "C1'" sing N N 14 DC "C3'" "O3'" sing N N 15 DC "C3'" "C2'" sing N N 16 DC "C3'" "H3'" sing N N 17 DC "O3'" "HO3'" sing N N 18 DC "C2'" "C1'" sing N N 19 DC "C2'" "H2'" sing N N 20 DC "C2'" "H2''" sing N N 21 DC "C1'" N1 sing N N 22 DC "C1'" "H1'" sing N N 23 DC N1 C2 sing N N 24 DC N1 C6 sing N N 25 DC C2 O2 doub N N 26 DC C2 N3 sing N N 27 DC N3 C4 doub N N 28 DC C4 N4 sing N N 29 DC C4 C5 sing N N 30 DC N4 H41 sing N N 31 DC N4 H42 sing N N 32 DC C5 C6 doub N N 33 DC C5 H5 sing N N 34 DC C6 H6 sing N N 35 DG OP3 P sing N N 36 DG OP3 HOP3 sing N N 37 DG P OP1 doub N N 38 DG P OP2 sing N N 39 DG P "O5'" sing N N 40 DG OP2 HOP2 sing N N 41 DG "O5'" "C5'" sing N N 42 DG "C5'" "C4'" sing N N 43 DG "C5'" "H5'" sing N N 44 DG "C5'" "H5''" sing N N 45 DG "C4'" "O4'" sing N N 46 DG "C4'" "C3'" sing N N 47 DG "C4'" "H4'" sing N N 48 DG "O4'" "C1'" sing N N 49 DG "C3'" "O3'" sing N N 50 DG "C3'" "C2'" sing N N 51 DG "C3'" "H3'" sing N N 52 DG "O3'" "HO3'" sing N N 53 DG "C2'" "C1'" sing N N 54 DG "C2'" "H2'" sing N N 55 DG "C2'" "H2''" sing N N 56 DG "C1'" N9 sing N N 57 DG "C1'" "H1'" sing N N 58 DG N9 C8 sing Y N 59 DG N9 C4 sing Y N 60 DG C8 N7 doub Y N 61 DG C8 H8 sing N N 62 DG N7 C5 sing Y N 63 DG C5 C6 sing N N 64 DG C5 C4 doub Y N 65 DG C6 O6 doub N N 66 DG C6 N1 sing N N 67 DG N1 C2 sing N N 68 DG N1 H1 sing N N 69 DG C2 N2 sing N N 70 DG C2 N3 doub N N 71 DG N2 H21 sing N N 72 DG N2 H22 sing N N 73 DG N3 C4 sing N N 74 HOH O H1 sing N N 75 HOH O H2 sing N N 76 # _ndb_struct_conf_na.entry_id 160D _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.106 -0.181 0.253 3.399 -3.258 -0.057 1 A_DC1:DG20_B A 1 ? B 20 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 0.252 -0.215 -0.249 6.621 -12.273 1.042 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1 1 A DC 3 1_555 B DG 8 1_555 0.374 -0.274 -0.495 9.978 -6.514 2.728 3 A_DC3:DG18_B A 3 ? B 18 ? 19 1 1 A DG 4 1_555 B DC 7 1_555 -0.190 -0.138 -0.071 -11.537 -13.663 1.731 4 A_DG4:DC17_B A 4 ? B 17 ? 19 1 1 A DG 5 1_555 B DC 6 1_555 -0.157 -0.021 -0.099 -6.223 -11.057 2.870 5 A_DG5:DC16_B A 5 ? B 16 ? 19 1 1 A DC 6 1_555 B DG 5 1_555 0.221 -0.173 -0.278 3.846 -8.794 -2.493 6 A_DC6:DG15_B A 6 ? B 15 ? 19 1 1 A DC 7 1_555 B DG 4 1_555 0.267 -0.110 0.111 -0.917 -8.472 2.379 7 A_DC7:DG14_B A 7 ? B 14 ? 19 1 1 A DG 8 1_555 B DC 3 1_555 0.040 -0.243 -0.194 -4.298 -7.789 -1.273 8 A_DG8:DC13_B A 8 ? B 13 ? 19 1 1 A DG 9 1_555 B DC 2 1_555 -0.143 -0.181 -0.378 -16.616 -8.917 -1.921 9 A_DG9:DC12_B A 9 ? B 12 ? 19 1 1 A DG 10 1_555 B DC 1 1_555 0.111 -0.242 -0.009 1.533 -0.219 -0.319 10 A_DG10:DC11_B A 10 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 0.279 -1.761 3.301 1.262 -0.641 33.965 -2.909 -0.272 3.341 -1.096 -2.160 33.994 1 AA_DC1DC2:DG19DG20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DC 2 1_555 B DG 9 1_555 A DC 3 1_555 B DG 8 1_555 -0.193 -1.842 3.368 -0.210 3.827 28.221 -4.614 0.345 3.097 7.804 0.428 28.475 2 AA_DC2DC3:DG18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DC 3 1_555 B DG 8 1_555 A DG 4 1_555 B DC 7 1_555 -1.366 -1.687 3.903 -5.073 8.733 32.840 -4.449 1.392 3.519 15.011 8.720 34.317 3 AA_DC3DG4:DC17DG18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DG 4 1_555 B DC 7 1_555 A DG 5 1_555 B DC 6 1_555 0.922 -1.874 3.132 3.304 13.123 25.629 -6.202 -1.229 2.049 27.292 -6.872 28.930 4 AA_DG4DG5:DC16DC17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A DG 5 1_555 B DC 6 1_555 A DC 6 1_555 B DG 5 1_555 -0.623 -1.306 3.138 0.530 8.213 31.661 -3.612 1.191 2.713 14.743 -0.952 32.687 5 AA_DG5DC6:DG15DC16_BB A 5 ? B 16 ? A 6 ? B 15 ? 1 A DC 6 1_555 B DG 5 1_555 A DC 7 1_555 B DG 4 1_555 1.301 -1.518 3.510 0.364 7.232 30.306 -4.240 -2.353 3.089 13.591 -0.683 31.139 6 AA_DC6DC7:DG14DG15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A DC 7 1_555 B DG 4 1_555 A DG 8 1_555 B DC 3 1_555 0.120 -2.203 3.429 3.429 8.367 26.744 -6.378 0.514 2.628 17.467 -7.158 28.205 7 AA_DC7DG8:DC13DG14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A DG 8 1_555 B DC 3 1_555 A DG 9 1_555 B DC 2 1_555 0.119 -1.957 3.757 2.365 6.282 29.571 -5.124 0.292 3.280 12.112 -4.560 30.307 8 AA_DG8DG9:DC12DC13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DG 9 1_555 B DC 2 1_555 A DG 10 1_555 B DC 1 1_555 0.280 -1.944 2.950 0.935 1.156 33.062 -3.587 -0.352 2.889 2.031 -1.642 33.095 9 AA_DG9DG10:DC11DC12_BB A 9 ? B 12 ? A 10 ? B 11 ? # _atom_sites.entry_id 160D _atom_sites.fract_transf_matrix[1][1] 0.040193 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022422 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021290 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_