data_1914 # _entry.id 1914 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1914 WWPDB D_1000170202 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1914 _pdbx_database_status.recvd_initial_deposition_date 1997-11-13 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Birse, D.' 1 'Kapp, U.' 2 'Strub, K.' 3 'Cusack, S.' 4 'Aberg, A.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'The crystal structure of the signal recognition particle Alu RNA binding heterodimer, SRP9/14.' 'EMBO J.' 16 3757 3766 1997 EMJODG UK 0261-4189 0897 ? 9233785 10.1093/emboj/16.13.3757 1 'Crystallization and Preliminary Crystallographic Analysis of the Signal Recognition Particle Srpphi14-9 Fusion Protein' 'FEBS Lett.' 384 215 ? 1996 FEBLAL NE 0014-5793 0165 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Birse, D.E.' 1 primary 'Kapp, U.' 2 primary 'Strub, K.' 3 primary 'Cusack, S.' 4 primary 'Aberg, A.' 5 1 'Birse, D.E.' 6 1 'Doublie, S.' 7 1 'Kapp, U.' 8 1 'Strub, K.' 9 1 'Cusack, S.' 10 1 'Aberg, A.' 11 # _cell.entry_id 1914 _cell.length_a 69.020 _cell.length_b 69.020 _cell.length_c 90.440 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1914 _symmetry.space_group_name_H-M 'P 43 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SIGNAL RECOGNITION PARTICLE 9/14 FUSION PROTEIN' 26389.631 1 ? ? 'ALU RNA BINDING HETERODIMER' ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 non-polymer syn BETA-MERCAPTOETHANOL 78.133 1 ? ? ? ? 4 water nat water 18.015 17 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'SRP9/14, ALU BM, RBD' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MASMTGGQQMGRIPGNSPRMVLLESEQFLTELTRLFQKCRSSGSVFITLKKYDGRTKPIPRKSSVEGLEPAENKCLLRAT DGKRKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKSKKSKPAQGGEQKLISEEDDSAGSPMPQFQTWEEFSRAA EKLYLADPMKVRVVLKYRHVDGNLCIKVTDDLVCLVYRTDQAQDVKKIEKFHSQLMRLMVAKESRNVTMETE ; _entity_poly.pdbx_seq_one_letter_code_can ;MASMTGGQQMGRIPGNSPRMVLLESEQFLTELTRLFQKCRSSGSVFITLKKYDGRTKPIPRKSSVEGLEPAENKCLLRAT DGKRKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKSKKSKPAQGGEQKLISEEDDSAGSPMPQFQTWEEFSRAA EKLYLADPMKVRVVLKYRHVDGNLCIKVTDDLVCLVYRTDQAQDVKKIEKFHSQLMRLMVAKESRNVTMETE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 MET n 1 5 THR n 1 6 GLY n 1 7 GLY n 1 8 GLN n 1 9 GLN n 1 10 MET n 1 11 GLY n 1 12 ARG n 1 13 ILE n 1 14 PRO n 1 15 GLY n 1 16 ASN n 1 17 SER n 1 18 PRO n 1 19 ARG n 1 20 MET n 1 21 VAL n 1 22 LEU n 1 23 LEU n 1 24 GLU n 1 25 SER n 1 26 GLU n 1 27 GLN n 1 28 PHE n 1 29 LEU n 1 30 THR n 1 31 GLU n 1 32 LEU n 1 33 THR n 1 34 ARG n 1 35 LEU n 1 36 PHE n 1 37 GLN n 1 38 LYS n 1 39 CYS n 1 40 ARG n 1 41 SER n 1 42 SER n 1 43 GLY n 1 44 SER n 1 45 VAL n 1 46 PHE n 1 47 ILE n 1 48 THR n 1 49 LEU n 1 50 LYS n 1 51 LYS n 1 52 TYR n 1 53 ASP n 1 54 GLY n 1 55 ARG n 1 56 THR n 1 57 LYS n 1 58 PRO n 1 59 ILE n 1 60 PRO n 1 61 ARG n 1 62 LYS n 1 63 SER n 1 64 SER n 1 65 VAL n 1 66 GLU n 1 67 GLY n 1 68 LEU n 1 69 GLU n 1 70 PRO n 1 71 ALA n 1 72 GLU n 1 73 ASN n 1 74 LYS n 1 75 CYS n 1 76 LEU n 1 77 LEU n 1 78 ARG n 1 79 ALA n 1 80 THR n 1 81 ASP n 1 82 GLY n 1 83 LYS n 1 84 ARG n 1 85 LYS n 1 86 ILE n 1 87 SER n 1 88 THR n 1 89 VAL n 1 90 VAL n 1 91 SER n 1 92 SER n 1 93 LYS n 1 94 GLU n 1 95 VAL n 1 96 ASN n 1 97 LYS n 1 98 PHE n 1 99 GLN n 1 100 MET n 1 101 ALA n 1 102 TYR n 1 103 SER n 1 104 ASN n 1 105 LEU n 1 106 LEU n 1 107 ARG n 1 108 ALA n 1 109 ASN n 1 110 MET n 1 111 ASP n 1 112 GLY n 1 113 LEU n 1 114 LYS n 1 115 LYS n 1 116 ARG n 1 117 ASP n 1 118 LYS n 1 119 LYS n 1 120 ASN n 1 121 LYS n 1 122 SER n 1 123 LYS n 1 124 LYS n 1 125 SER n 1 126 LYS n 1 127 PRO n 1 128 ALA n 1 129 GLN n 1 130 GLY n 1 131 GLY n 1 132 GLU n 1 133 GLN n 1 134 LYS n 1 135 LEU n 1 136 ILE n 1 137 SER n 1 138 GLU n 1 139 GLU n 1 140 ASP n 1 141 ASP n 1 142 SER n 1 143 ALA n 1 144 GLY n 1 145 SER n 1 146 PRO n 1 147 MET n 1 148 PRO n 1 149 GLN n 1 150 PHE n 1 151 GLN n 1 152 THR n 1 153 TRP n 1 154 GLU n 1 155 GLU n 1 156 PHE n 1 157 SER n 1 158 ARG n 1 159 ALA n 1 160 ALA n 1 161 GLU n 1 162 LYS n 1 163 LEU n 1 164 TYR n 1 165 LEU n 1 166 ALA n 1 167 ASP n 1 168 PRO n 1 169 MET n 1 170 LYS n 1 171 VAL n 1 172 ARG n 1 173 VAL n 1 174 VAL n 1 175 LEU n 1 176 LYS n 1 177 TYR n 1 178 ARG n 1 179 HIS n 1 180 VAL n 1 181 ASP n 1 182 GLY n 1 183 ASN n 1 184 LEU n 1 185 CYS n 1 186 ILE n 1 187 LYS n 1 188 VAL n 1 189 THR n 1 190 ASP n 1 191 ASP n 1 192 LEU n 1 193 VAL n 1 194 CYS n 1 195 LEU n 1 196 VAL n 1 197 TYR n 1 198 ARG n 1 199 THR n 1 200 ASP n 1 201 GLN n 1 202 ALA n 1 203 GLN n 1 204 ASP n 1 205 VAL n 1 206 LYS n 1 207 LYS n 1 208 ILE n 1 209 GLU n 1 210 LYS n 1 211 PHE n 1 212 HIS n 1 213 SER n 1 214 GLN n 1 215 LEU n 1 216 MET n 1 217 ARG n 1 218 LEU n 1 219 MET n 1 220 VAL n 1 221 ALA n 1 222 LYS n 1 223 GLU n 1 224 SER n 1 225 ARG n 1 226 ASN n 1 227 VAL n 1 228 THR n 1 229 MET n 1 230 GLU n 1 231 THR n 1 232 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line 'BL21 PLYSS' _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location CYTOPLASM _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET3C _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SR14_MOUSE _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P16254 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MVLLESEQFLTELTRLFQKCRSSGSVFITLKKYDGRTKPIPRKSSVEGLEPAENKCLLRATDGKRKISTVVSSKEVNKFQ MAYSNLLRANMDGLKKRDKKNKSKKSKPAQ ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1914 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 129 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P16254 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 110 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2001 _struct_ref_seq.pdbx_auth_seq_align_end 3002 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1914 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 10 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.0 _exptl_crystal.density_percent_sol 34 _exptl_crystal.description 'DATA WERE COLLECTED ON SELENIUM, MERCURY AND PLATINUM DERIVATIVES TO SOLVE MIR STRUCTURE' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'hanging drop' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;THE SRPPHI14-9 PROTEIN WAS CRYSTALLIZED (BIRSE ET AL., FEBS LETTERS, 1996) BY THE HANGING DROP METHOD IN 2.0 M NAH2/K2H PO4, PH 7.7, 2% MPD, 1.0 MM NAN3 AT 4 DEGREES C WITH A FINAL PROTEIN CONCENTRATION OF 5-8 MG ML-1. CRYSTALS FORMED OVER 2-3 WEEKS AND WERE TYPICALLY 150 X 150 X 300 MM3 IN SPACE, hanging drop, temperature 277K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1996-09 _diffrn_detector.details 'TOROIDAL MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'CU FILTER' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.900 1.0 2 1.100 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID2 _diffrn_source.pdbx_wavelength 0.900 _diffrn_source.pdbx_wavelength_list '0.900, 1.100' # _reflns.entry_id 1914 _reflns.observed_criterion_sigma_I 3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.53 _reflns.number_obs 36596 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.0690000 _reflns.pdbx_Rsym_value 0.0690000 _reflns.pdbx_netI_over_sigmaI 5.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.0 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.53 _reflns_shell.d_res_low 2.6 _reflns_shell.percent_possible_all 97.2 _reflns_shell.Rmerge_I_obs 0.0218000 _reflns_shell.pdbx_Rsym_value 0.0218000 _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.pdbx_redundancy 4.2 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1914 _refine.ls_number_reflns_obs 7634 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 10000000.0 _refine.pdbx_data_cutoff_low_absF 0.001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 2.53 _refine.ls_percent_reflns_obs 98.7 _refine.ls_R_factor_obs 0.2480000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2480000 _refine.ls_R_factor_R_free 0.2990000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.0 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;THE MODEL INCLUDES 77 RESIDUES OF SRP9 (4-81) AND 84 RESIDUES OF SRP14 (1-34) AND (47-97). THE SRP14 LOOP ELECTRON DENSITY CONNECTING 14B1-14B2 (34-47) IS WEAK SUGGESTING THAT THE LOOP IS FLEXIBLE. 5 C-TERMINAL AND 3 N-TERMINAL RESIDUES OF SRP9 AND 13 C-TERMINAL RESIDUES OF SRP14 HAVE POORLY DEFINED DENSITY. IN ADDITION, THE MODEL DOES NOT INCLUDE THE SRPF14-9 N-TERMINAL F EXTENSION (18 RESIDUES) NOR THE ENTIRE LINKER REGION OF WHICH ONLY 8 OF 17 RESIDUES ARE ORDERED. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MULTIPLE ISOMORPHOUS REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1914 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs 20.0 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1383 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 39 _refine_hist.number_atoms_total 1424 _refine_hist.d_res_high 2.53 _refine_hist.d_res_low 20.0 # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.53 _refine_ls_shell.d_res_low 2.64 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work ? _refine_ls_shell.percent_reflns_obs 97.2 _refine_ls_shell.R_factor_R_free ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARAM19X.PRO TOPH19X.PRO 'X-RAY DIFFRACTION' 2 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' # _struct.entry_id 1914 _struct.title 'SIGNAL RECOGNITION PARTICLE ALU RNA BINDING HETERODIMER, SRP9/14' _struct.pdbx_descriptor 'SIGNAL RECOGNITION PARTICLE 9/14 FUSION PROTEIN, BETA-MERCAPTOETHANOL' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1914 _struct_keywords.pdbx_keywords 'ALU DOMAIN' _struct_keywords.text 'ALU DOMAIN, RNA BINDING, SIGNAL RECOGNITION PARTICLE (SRP), TRANSLATION REGULATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 25 ? CYS A 39 ? SER A 2006 CYS A 2020 1 ? 15 HELX_P HELX_P2 2 VAL A 95 ? ASN A 109 ? VAL A 2076 ASN A 2090 1 ? 15 HELX_P HELX_P3 3 TRP A 153 ? ALA A 166 ? TRP A 4007 ALA A 4020 1 ? 14 HELX_P HELX_P4 4 ALA A 202 ? VAL A 220 ? ALA A 4056 VAL A 4074 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_comp_id BME _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_label_atom_id S2 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 185 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id BME _struct_conn.ptnr1_auth_seq_id 6000 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 4039 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.025 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 85 ? SER A 91 ? LYS A 2066 SER A 2072 A 2 LYS A 74 ? THR A 80 ? LYS A 2055 THR A 2061 A 3 VAL A 45 ? TYR A 52 ? VAL A 2026 TYR A 2033 A 4 ARG A 172 ? ARG A 178 ? ARG A 4026 ARG A 4032 A 5 ASN A 183 ? THR A 189 ? ASN A 4037 THR A 4043 A 6 CYS A 194 ? THR A 199 ? CYS A 4048 THR A 4053 A 7 GLY A 130 ? LYS A 134 ? GLY A 3003 LYS A 3007 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 86 ? O ILE A 2067 N ALA A 79 ? N ALA A 2060 A 2 3 O LYS A 74 ? O LYS A 2055 N TYR A 52 ? N TYR A 2033 A 3 4 O VAL A 45 ? O VAL A 2026 N TYR A 177 ? N TYR A 4031 A 4 5 O ARG A 172 ? O ARG A 4026 N THR A 189 ? N THR A 4043 A 5 6 O LEU A 184 ? O LEU A 4038 N THR A 199 ? N THR A 4053 A 6 7 O CYS A 194 ? O CYS A 4048 N LYS A 134 ? N LYS A 3007 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE PO4 A 5001' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE BME A 6000' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 LYS A 50 ? LYS A 2031 . ? 1_555 ? 2 AC1 4 ARG A 78 ? ARG A 2059 . ? 1_555 ? 3 AC1 4 ARG A 172 ? ARG A 4026 . ? 1_555 ? 4 AC1 4 VAL A 227 ? VAL A 4081 . ? 3_754 ? 5 AC2 3 VAL A 174 ? VAL A 4028 . ? 1_555 ? 6 AC2 3 CYS A 185 ? CYS A 4039 . ? 1_555 ? 7 AC2 3 ARG A 198 ? ARG A 4052 . ? 1_555 ? # _database_PDB_matrix.entry_id 1914 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1914 _atom_sites.fract_transf_matrix[1][1] 0.014489 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014489 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011057 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1982 ? ? ? A . n A 1 2 ALA 2 1983 ? ? ? A . n A 1 3 SER 3 1984 ? ? ? A . n A 1 4 MET 4 1985 ? ? ? A . n A 1 5 THR 5 1986 ? ? ? A . n A 1 6 GLY 6 1987 ? ? ? A . n A 1 7 GLY 7 1988 ? ? ? A . n A 1 8 GLN 8 1989 ? ? ? A . n A 1 9 GLN 9 1990 ? ? ? A . n A 1 10 MET 10 1991 ? ? ? A . n A 1 11 GLY 11 1992 ? ? ? A . n A 1 12 ARG 12 1993 ? ? ? A . n A 1 13 ILE 13 1994 ? ? ? A . n A 1 14 PRO 14 1995 ? ? ? A . n A 1 15 GLY 15 1996 ? ? ? A . n A 1 16 ASN 16 1997 ? ? ? A . n A 1 17 SER 17 1998 ? ? ? A . n A 1 18 PRO 18 1999 ? ? ? A . n A 1 19 ARG 19 2000 ? ? ? A . n A 1 20 MET 20 2001 2001 MET MET A . n A 1 21 VAL 21 2002 2002 VAL VAL A . n A 1 22 LEU 22 2003 2003 LEU LEU A . n A 1 23 LEU 23 2004 2004 LEU LEU A . n A 1 24 GLU 24 2005 2005 GLU GLU A . n A 1 25 SER 25 2006 2006 SER SER A . n A 1 26 GLU 26 2007 2007 GLU GLU A . n A 1 27 GLN 27 2008 2008 GLN GLN A . n A 1 28 PHE 28 2009 2009 PHE PHE A . n A 1 29 LEU 29 2010 2010 LEU LEU A . n A 1 30 THR 30 2011 2011 THR THR A . n A 1 31 GLU 31 2012 2012 GLU GLU A . n A 1 32 LEU 32 2013 2013 LEU LEU A . n A 1 33 THR 33 2014 2014 THR THR A . n A 1 34 ARG 34 2015 2015 ARG ARG A . n A 1 35 LEU 35 2016 2016 LEU LEU A . n A 1 36 PHE 36 2017 2017 PHE PHE A . n A 1 37 GLN 37 2018 2018 GLN GLN A . n A 1 38 LYS 38 2019 2019 LYS LYS A . n A 1 39 CYS 39 2020 2020 CYS CYS A . n A 1 40 ARG 40 2021 2021 ARG ARG A . n A 1 41 SER 41 2022 2022 SER SER A . n A 1 42 SER 42 2023 2023 SER SER A . n A 1 43 GLY 43 2024 2024 GLY GLY A . n A 1 44 SER 44 2025 2025 SER SER A . n A 1 45 VAL 45 2026 2026 VAL VAL A . n A 1 46 PHE 46 2027 2027 PHE PHE A . n A 1 47 ILE 47 2028 2028 ILE ILE A . n A 1 48 THR 48 2029 2029 THR THR A . n A 1 49 LEU 49 2030 2030 LEU LEU A . n A 1 50 LYS 50 2031 2031 LYS LYS A . n A 1 51 LYS 51 2032 2032 LYS LYS A . n A 1 52 TYR 52 2033 2033 TYR TYR A . n A 1 53 ASP 53 2034 2034 ASP ASP A . n A 1 54 GLY 54 2035 ? ? ? A . n A 1 55 ARG 55 2036 ? ? ? A . n A 1 56 THR 56 2037 ? ? ? A . n A 1 57 LYS 57 2038 ? ? ? A . n A 1 58 PRO 58 2039 ? ? ? A . n A 1 59 ILE 59 2040 ? ? ? A . n A 1 60 PRO 60 2041 ? ? ? A . n A 1 61 ARG 61 2042 ? ? ? A . n A 1 62 LYS 62 2043 ? ? ? A . n A 1 63 SER 63 2044 ? ? ? A . n A 1 64 SER 64 2045 ? ? ? A . n A 1 65 VAL 65 2046 ? ? ? A . n A 1 66 GLU 66 2047 2047 GLU GLU A . n A 1 67 GLY 67 2048 2048 GLY GLY A . n A 1 68 LEU 68 2049 2049 LEU LEU A . n A 1 69 GLU 69 2050 2050 GLU GLU A . n A 1 70 PRO 70 2051 2051 PRO PRO A . n A 1 71 ALA 71 2052 2052 ALA ALA A . n A 1 72 GLU 72 2053 2053 GLU GLU A . n A 1 73 ASN 73 2054 2054 ASN ASN A . n A 1 74 LYS 74 2055 2055 LYS LYS A . n A 1 75 CYS 75 2056 2056 CYS CYS A . n A 1 76 LEU 76 2057 2057 LEU LEU A . n A 1 77 LEU 77 2058 2058 LEU LEU A . n A 1 78 ARG 78 2059 2059 ARG ARG A . n A 1 79 ALA 79 2060 2060 ALA ALA A . n A 1 80 THR 80 2061 2061 THR THR A . n A 1 81 ASP 81 2062 2062 ASP ASP A . n A 1 82 GLY 82 2063 2063 GLY GLY A . n A 1 83 LYS 83 2064 2064 LYS LYS A . n A 1 84 ARG 84 2065 2065 ARG ARG A . n A 1 85 LYS 85 2066 2066 LYS LYS A . n A 1 86 ILE 86 2067 2067 ILE ILE A . n A 1 87 SER 87 2068 2068 SER SER A . n A 1 88 THR 88 2069 2069 THR THR A . n A 1 89 VAL 89 2070 2070 VAL VAL A . n A 1 90 VAL 90 2071 2071 VAL VAL A . n A 1 91 SER 91 2072 2072 SER SER A . n A 1 92 SER 92 2073 2073 SER SER A . n A 1 93 LYS 93 2074 2074 LYS LYS A . n A 1 94 GLU 94 2075 2075 GLU GLU A . n A 1 95 VAL 95 2076 2076 VAL VAL A . n A 1 96 ASN 96 2077 2077 ASN ASN A . n A 1 97 LYS 97 2078 2078 LYS LYS A . n A 1 98 PHE 98 2079 2079 PHE PHE A . n A 1 99 GLN 99 2080 2080 GLN GLN A . n A 1 100 MET 100 2081 2081 MET MET A . n A 1 101 ALA 101 2082 2082 ALA ALA A . n A 1 102 TYR 102 2083 2083 TYR TYR A . n A 1 103 SER 103 2084 2084 SER SER A . n A 1 104 ASN 104 2085 2085 ASN ASN A . n A 1 105 LEU 105 2086 2086 LEU LEU A . n A 1 106 LEU 106 2087 2087 LEU LEU A . n A 1 107 ARG 107 2088 2088 ARG ARG A . n A 1 108 ALA 108 2089 2089 ALA ALA A . n A 1 109 ASN 109 2090 2090 ASN ASN A . n A 1 110 MET 110 2091 2091 MET MET A . n A 1 111 ASP 111 2092 2092 ASP ASP A . n A 1 112 GLY 112 2093 2093 GLY GLY A . n A 1 113 LEU 113 2094 2094 LEU LEU A . n A 1 114 LYS 114 2095 2095 LYS LYS A . n A 1 115 LYS 115 2096 2096 LYS LYS A . n A 1 116 ARG 116 2097 2097 ARG ARG A . n A 1 117 ASP 117 2990 ? ? ? A . n A 1 118 LYS 118 2991 ? ? ? A . n A 1 119 LYS 119 2992 ? ? ? A . n A 1 120 ASN 120 2993 ? ? ? A . n A 1 121 LYS 121 2994 ? ? ? A . n A 1 122 SER 122 2995 ? ? ? A . n A 1 123 LYS 123 2996 ? ? ? A . n A 1 124 LYS 124 2997 ? ? ? A . n A 1 125 SER 125 2998 ? ? ? A . n A 1 126 LYS 126 2999 ? ? ? A . n A 1 127 PRO 127 3000 ? ? ? A . n A 1 128 ALA 128 3001 3001 ALA ALA A . n A 1 129 GLN 129 3002 3002 GLN GLN A . n A 1 130 GLY 130 3003 3003 GLY GLY A . n A 1 131 GLY 131 3004 3004 GLY GLY A . n A 1 132 GLU 132 3005 3005 GLU GLU A . n A 1 133 GLN 133 3006 3006 GLN GLN A . n A 1 134 LYS 134 3007 3007 LYS LYS A . n A 1 135 LEU 135 3008 3008 LEU LEU A . n A 1 136 ILE 136 3990 ? ? ? A . n A 1 137 SER 137 3991 ? ? ? A . n A 1 138 GLU 138 3992 ? ? ? A . n A 1 139 GLU 139 3993 ? ? ? A . n A 1 140 ASP 140 3994 ? ? ? A . n A 1 141 ASP 141 3995 ? ? ? A . n A 1 142 SER 142 3996 ? ? ? A . n A 1 143 ALA 143 3997 ? ? ? A . n A 1 144 GLY 144 3998 ? ? ? A . n A 1 145 SER 145 3999 ? ? ? A . n A 1 146 PRO 146 4000 ? ? ? A . n A 1 147 MET 147 4001 ? ? ? A . n A 1 148 PRO 148 4002 ? ? ? A . n A 1 149 GLN 149 4003 ? ? ? A . n A 1 150 PHE 150 4004 4004 PHE PHE A . n A 1 151 GLN 151 4005 4005 GLN GLN A . n A 1 152 THR 152 4006 4006 THR THR A . n A 1 153 TRP 153 4007 4007 TRP TRP A . n A 1 154 GLU 154 4008 4008 GLU GLU A . n A 1 155 GLU 155 4009 4009 GLU GLU A . n A 1 156 PHE 156 4010 4010 PHE PHE A . n A 1 157 SER 157 4011 4011 SER SER A . n A 1 158 ARG 158 4012 4012 ARG ARG A . n A 1 159 ALA 159 4013 4013 ALA ALA A . n A 1 160 ALA 160 4014 4014 ALA ALA A . n A 1 161 GLU 161 4015 4015 GLU GLU A . n A 1 162 LYS 162 4016 4016 LYS LYS A . n A 1 163 LEU 163 4017 4017 LEU LEU A . n A 1 164 TYR 164 4018 4018 TYR TYR A . n A 1 165 LEU 165 4019 4019 LEU LEU A . n A 1 166 ALA 166 4020 4020 ALA ALA A . n A 1 167 ASP 167 4021 4021 ASP ASP A . n A 1 168 PRO 168 4022 4022 PRO PRO A . n A 1 169 MET 169 4023 4023 MET MET A . n A 1 170 LYS 170 4024 4024 LYS LYS A . n A 1 171 VAL 171 4025 4025 VAL VAL A . n A 1 172 ARG 172 4026 4026 ARG ARG A . n A 1 173 VAL 173 4027 4027 VAL VAL A . n A 1 174 VAL 174 4028 4028 VAL VAL A . n A 1 175 LEU 175 4029 4029 LEU LEU A . n A 1 176 LYS 176 4030 4030 LYS LYS A . n A 1 177 TYR 177 4031 4031 TYR TYR A . n A 1 178 ARG 178 4032 4032 ARG ARG A . n A 1 179 HIS 179 4033 4033 HIS HIS A . n A 1 180 VAL 180 4034 4034 VAL VAL A . n A 1 181 ASP 181 4035 4035 ASP ASP A . n A 1 182 GLY 182 4036 4036 GLY GLY A . n A 1 183 ASN 183 4037 4037 ASN ASN A . n A 1 184 LEU 184 4038 4038 LEU LEU A . n A 1 185 CYS 185 4039 4039 CYS CYS A . n A 1 186 ILE 186 4040 4040 ILE ILE A . n A 1 187 LYS 187 4041 4041 LYS LYS A . n A 1 188 VAL 188 4042 4042 VAL VAL A . n A 1 189 THR 189 4043 4043 THR THR A . n A 1 190 ASP 190 4044 4044 ASP ASP A . n A 1 191 ASP 191 4045 4045 ASP ASP A . n A 1 192 LEU 192 4046 4046 LEU LEU A . n A 1 193 VAL 193 4047 4047 VAL VAL A . n A 1 194 CYS 194 4048 4048 CYS CYS A . n A 1 195 LEU 195 4049 4049 LEU LEU A . n A 1 196 VAL 196 4050 4050 VAL VAL A . n A 1 197 TYR 197 4051 4051 TYR TYR A . n A 1 198 ARG 198 4052 4052 ARG ARG A . n A 1 199 THR 199 4053 4053 THR THR A . n A 1 200 ASP 200 4054 4054 ASP ASP A . n A 1 201 GLN 201 4055 4055 GLN GLN A . n A 1 202 ALA 202 4056 4056 ALA ALA A . n A 1 203 GLN 203 4057 4057 GLN GLN A . n A 1 204 ASP 204 4058 4058 ASP ASP A . n A 1 205 VAL 205 4059 4059 VAL VAL A . n A 1 206 LYS 206 4060 4060 LYS LYS A . n A 1 207 LYS 207 4061 4061 LYS LYS A . n A 1 208 ILE 208 4062 4062 ILE ILE A . n A 1 209 GLU 209 4063 4063 GLU GLU A . n A 1 210 LYS 210 4064 4064 LYS LYS A . n A 1 211 PHE 211 4065 4065 PHE PHE A . n A 1 212 HIS 212 4066 4066 HIS HIS A . n A 1 213 SER 213 4067 4067 SER SER A . n A 1 214 GLN 214 4068 4068 GLN GLN A . n A 1 215 LEU 215 4069 4069 LEU LEU A . n A 1 216 MET 216 4070 4070 MET MET A . n A 1 217 ARG 217 4071 4071 ARG ARG A . n A 1 218 LEU 218 4072 4072 LEU LEU A . n A 1 219 MET 219 4073 4073 MET MET A . n A 1 220 VAL 220 4074 4074 VAL VAL A . n A 1 221 ALA 221 4075 4075 ALA ALA A . n A 1 222 LYS 222 4076 4076 LYS LYS A . n A 1 223 GLU 223 4077 4077 GLU GLU A . n A 1 224 SER 224 4078 4078 SER SER A . n A 1 225 ARG 225 4079 4079 ARG ARG A . n A 1 226 ASN 226 4080 4080 ASN ASN A . n A 1 227 VAL 227 4081 4081 VAL VAL A . n A 1 228 THR 228 4082 ? ? ? A . n A 1 229 MET 229 4083 ? ? ? A . n A 1 230 GLU 230 4084 ? ? ? A . n A 1 231 THR 231 4085 ? ? ? A . n A 1 232 GLU 232 4086 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 5001 5001 PO4 PO4 A . C 3 BME 1 6000 6000 BME BME A . D 4 HOH 1 9000 9000 HOH HOH A . D 4 HOH 2 9001 9001 HOH HOH A . D 4 HOH 3 9002 9002 HOH HOH A . D 4 HOH 4 9003 9003 HOH HOH A . D 4 HOH 5 9004 9004 HOH HOH A . D 4 HOH 6 9005 9005 HOH HOH A . D 4 HOH 7 9006 9006 HOH HOH A . D 4 HOH 8 9007 9007 HOH HOH A . D 4 HOH 9 9008 9008 HOH HOH A . D 4 HOH 10 9009 9009 HOH HOH A . D 4 HOH 11 9010 9010 HOH HOH A . D 4 HOH 12 9011 9011 HOH HOH A . D 4 HOH 13 9012 9012 HOH HOH A . D 4 HOH 14 9013 9013 HOH HOH A . D 4 HOH 15 9014 9014 HOH HOH A . D 4 HOH 16 9015 9015 HOH HOH A . D 4 HOH 17 9016 9016 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 9000 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-12-30 2 'Structure model' 1 1 2008-03-05 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.8 ? 1 X-PLOR refinement 3.8 ? 2 DENZO 'data reduction' . ? 3 MOSFLM 'data reduction' . ? 4 CCP4 'data scaling' . ? 5 X-PLOR phasing 3.8 ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 PHE _pdbx_validate_close_contact.auth_seq_id_1 4004 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 THR _pdbx_validate_close_contact.auth_seq_id_2 4006 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NE2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 GLN _pdbx_validate_symm_contact.auth_seq_id_1 2018 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 OE1 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 GLU _pdbx_validate_symm_contact.auth_seq_id_2 4008 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_654 _pdbx_validate_symm_contact.dist 2.06 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N A GLY 2048 ? ? CA A GLY 2048 ? ? 1.587 1.456 0.131 0.015 N 2 1 CB A THR 2061 ? ? CG2 A THR 2061 ? ? 1.028 1.519 -0.491 0.033 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 2021 ? ? CZ A ARG 2021 ? ? NH2 A ARG 2021 ? ? 123.58 120.30 3.28 0.50 N 2 1 CB A GLU 2047 ? ? CA A GLU 2047 ? ? C A GLU 2047 ? ? 138.24 110.40 27.84 2.00 N 3 1 N A GLU 2047 ? ? CA A GLU 2047 ? ? C A GLU 2047 ? ? 91.47 111.00 -19.53 2.70 N 4 1 CA A GLU 2047 ? ? C A GLU 2047 ? ? N A GLY 2048 ? ? 140.04 116.20 23.84 2.00 Y 5 1 O A GLU 2047 ? ? C A GLU 2047 ? ? N A GLY 2048 ? ? 98.65 123.20 -24.55 1.70 Y 6 1 NE A ARG 2065 ? ? CZ A ARG 2065 ? ? NH2 A ARG 2065 ? ? 123.36 120.30 3.06 0.50 N 7 1 C A ARG 2065 ? ? N A LYS 2066 ? ? CA A LYS 2066 ? ? 139.76 121.70 18.06 2.50 Y 8 1 C A LYS 2096 ? ? N A ARG 2097 ? ? CA A ARG 2097 ? ? 138.39 121.70 16.69 2.50 Y 9 1 O A PHE 4004 ? ? C A PHE 4004 ? ? N A GLN 4005 ? ? 132.45 122.70 9.75 1.60 Y 10 1 N A ASN 4080 ? ? CA A ASN 4080 ? ? C A ASN 4080 ? ? 128.14 111.00 17.14 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 2049 ? ? 65.94 62.86 2 1 PRO A 2051 ? ? -62.46 16.63 3 1 ALA A 2052 ? ? 100.04 -70.15 4 1 GLU A 2053 ? ? 115.57 94.41 5 1 GLU A 2075 ? ? -140.87 21.81 6 1 LYS A 2095 ? ? -44.87 97.91 7 1 LYS A 2096 ? ? -22.92 -82.14 8 1 GLN A 4005 ? ? 44.86 -93.01 9 1 LEU A 4046 ? ? -117.31 -71.54 10 1 ASN A 4080 ? ? -95.66 54.62 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id ARG _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 2065 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 15.87 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CA _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id GLU _pdbx_validate_chiral.auth_seq_id 2047 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1982 ? A MET 1 2 1 Y 1 A ALA 1983 ? A ALA 2 3 1 Y 1 A SER 1984 ? A SER 3 4 1 Y 1 A MET 1985 ? A MET 4 5 1 Y 1 A THR 1986 ? A THR 5 6 1 Y 1 A GLY 1987 ? A GLY 6 7 1 Y 1 A GLY 1988 ? A GLY 7 8 1 Y 1 A GLN 1989 ? A GLN 8 9 1 Y 1 A GLN 1990 ? A GLN 9 10 1 Y 1 A MET 1991 ? A MET 10 11 1 Y 1 A GLY 1992 ? A GLY 11 12 1 Y 1 A ARG 1993 ? A ARG 12 13 1 Y 1 A ILE 1994 ? A ILE 13 14 1 Y 1 A PRO 1995 ? A PRO 14 15 1 Y 1 A GLY 1996 ? A GLY 15 16 1 Y 1 A ASN 1997 ? A ASN 16 17 1 Y 1 A SER 1998 ? A SER 17 18 1 Y 1 A PRO 1999 ? A PRO 18 19 1 Y 1 A ARG 2000 ? A ARG 19 20 1 Y 1 A GLY 2035 ? A GLY 54 21 1 Y 1 A ARG 2036 ? A ARG 55 22 1 Y 1 A THR 2037 ? A THR 56 23 1 Y 1 A LYS 2038 ? A LYS 57 24 1 Y 1 A PRO 2039 ? A PRO 58 25 1 Y 1 A ILE 2040 ? A ILE 59 26 1 Y 1 A PRO 2041 ? A PRO 60 27 1 Y 1 A ARG 2042 ? A ARG 61 28 1 Y 1 A LYS 2043 ? A LYS 62 29 1 Y 1 A SER 2044 ? A SER 63 30 1 Y 1 A SER 2045 ? A SER 64 31 1 Y 1 A VAL 2046 ? A VAL 65 32 1 Y 1 A ASP 2990 ? A ASP 117 33 1 Y 1 A LYS 2991 ? A LYS 118 34 1 Y 1 A LYS 2992 ? A LYS 119 35 1 Y 1 A ASN 2993 ? A ASN 120 36 1 Y 1 A LYS 2994 ? A LYS 121 37 1 Y 1 A SER 2995 ? A SER 122 38 1 Y 1 A LYS 2996 ? A LYS 123 39 1 Y 1 A LYS 2997 ? A LYS 124 40 1 Y 1 A SER 2998 ? A SER 125 41 1 Y 1 A LYS 2999 ? A LYS 126 42 1 Y 1 A PRO 3000 ? A PRO 127 43 1 Y 1 A ILE 3990 ? A ILE 136 44 1 Y 1 A SER 3991 ? A SER 137 45 1 Y 1 A GLU 3992 ? A GLU 138 46 1 Y 1 A GLU 3993 ? A GLU 139 47 1 Y 1 A ASP 3994 ? A ASP 140 48 1 Y 1 A ASP 3995 ? A ASP 141 49 1 Y 1 A SER 3996 ? A SER 142 50 1 Y 1 A ALA 3997 ? A ALA 143 51 1 Y 1 A GLY 3998 ? A GLY 144 52 1 Y 1 A SER 3999 ? A SER 145 53 1 Y 1 A PRO 4000 ? A PRO 146 54 1 Y 1 A MET 4001 ? A MET 147 55 1 Y 1 A PRO 4002 ? A PRO 148 56 1 Y 1 A GLN 4003 ? A GLN 149 57 1 Y 1 A THR 4082 ? A THR 228 58 1 Y 1 A MET 4083 ? A MET 229 59 1 Y 1 A GLU 4084 ? A GLU 230 60 1 Y 1 A THR 4085 ? A THR 231 61 1 Y 1 A GLU 4086 ? A GLU 232 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 BETA-MERCAPTOETHANOL BME 4 water HOH #