data_1A8K # _entry.id 1A8K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1A8K pdb_00001a8k 10.2210/pdb1a8k/pdb WWPDB D_1000170527 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1A8K _pdbx_database_status.recvd_initial_deposition_date 1998-03-27 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Weber, I.T.' 1 'Wu, J.' 2 'Adomat, J.' 3 'Harrison, R.W.' 4 'Kimmel, A.R.' 5 'Wondrak, E.M.' 6 'Louis, J.M.' 7 # _citation.id primary _citation.title ;Crystallographic analysis of human immunodeficiency virus 1 protease with an analog of the conserved CA-p2 substrate -- interactions with frequently occurring glutamic acid residue at P2' position of substrates. ; _citation.journal_abbrev Eur.J.Biochem. _citation.journal_volume 249 _citation.page_first 523 _citation.page_last 530 _citation.year 1997 _citation.journal_id_ASTM EJBCAI _citation.country IX _citation.journal_id_ISSN 0014-2956 _citation.journal_id_CSD 0262 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9370363 _citation.pdbx_database_id_DOI 10.1111/j.1432-1033.1997.00523.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Weber, I.T.' 1 ? primary 'Wu, J.' 2 ? primary 'Adomat, J.' 3 ? primary 'Harrison, R.W.' 4 ? primary 'Kimmel, A.R.' 5 ? primary 'Wondrak, E.M.' 6 ? primary 'Louis, J.M.' 7 ? # _cell.entry_id 1A8K _cell.length_a 59.600 _cell.length_b 52.200 _cell.length_c 61.700 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1A8K _symmetry.space_group_name_H-M 'P 1 1 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HIV PROTEASE' 10804.808 4 3.4.23.16 'Q7K, L33I, L63I' ? ? 2 non-polymer syn ;N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide ; 833.053 2 ? ? ? 'ANALOG OF THE CONSERVED CA-P2 SUBSTRATE' 3 water nat water 18.015 159 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _entity_poly.pdbx_seq_one_letter_code_can ;PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF ; _entity_poly.pdbx_strand_id A,B,D,E _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 ILE n 1 4 THR n 1 5 LEU n 1 6 TRP n 1 7 LYS n 1 8 ARG n 1 9 PRO n 1 10 LEU n 1 11 VAL n 1 12 THR n 1 13 ILE n 1 14 LYS n 1 15 ILE n 1 16 GLY n 1 17 GLY n 1 18 GLN n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 ALA n 1 23 LEU n 1 24 LEU n 1 25 ASP n 1 26 THR n 1 27 GLY n 1 28 ALA n 1 29 ASP n 1 30 ASP n 1 31 THR n 1 32 VAL n 1 33 ILE n 1 34 GLU n 1 35 GLU n 1 36 MET n 1 37 SER n 1 38 LEU n 1 39 PRO n 1 40 GLY n 1 41 ARG n 1 42 TRP n 1 43 LYS n 1 44 PRO n 1 45 LYS n 1 46 MET n 1 47 ILE n 1 48 GLY n 1 49 GLY n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LYS n 1 56 VAL n 1 57 ARG n 1 58 GLN n 1 59 TYR n 1 60 ASP n 1 61 GLN n 1 62 ILE n 1 63 ILE n 1 64 ILE n 1 65 GLU n 1 66 ILE n 1 67 CYS n 1 68 GLY n 1 69 HIS n 1 70 LYS n 1 71 ALA n 1 72 ILE n 1 73 GLY n 1 74 THR n 1 75 VAL n 1 76 LEU n 1 77 VAL n 1 78 GLY n 1 79 PRO n 1 80 THR n 1 81 PRO n 1 82 VAL n 1 83 ASN n 1 84 ILE n 1 85 ILE n 1 86 GLY n 1 87 ARG n 1 88 ASN n 1 89 LEU n 1 90 LEU n 1 91 THR n 1 92 GLN n 1 93 ILE n 1 94 GLY n 1 95 CYS n 1 96 THR n 1 97 LEU n 1 98 ASN n 1 99 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Lentivirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human immunodeficiency virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11676 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_HV1BR _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P03367 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;FFREDLAFLQGKAREFSSEQTRANSPTISSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFNFPQITLWQRPLVT IKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQ IGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRK LVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGW KGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYE LHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEP VHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARTRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPI QKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAASRETKLGKAGYVTNRGRQKVVTLTDTT NQKTELQAIHLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVS AGIRKVLFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVI LVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSTTVKAACWWAGIKQEFGIPYNPQSQGVVES MNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRDP LWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1A8K A 1 ? 99 ? P03367 69 ? 167 ? 1 99 2 1 1A8K B 1 ? 99 ? P03367 69 ? 167 ? 1 99 3 1 1A8K D 1 ? 99 ? P03367 69 ? 167 ? 1 99 4 1 1A8K E 1 ? 99 ? P03367 69 ? 167 ? 1 99 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1A8K LYS A 7 ? UNP P03367 GLN 75 'engineered mutation' 7 1 1 1A8K ILE A 33 ? UNP P03367 LEU 101 'engineered mutation' 33 2 1 1A8K ILE A 63 ? UNP P03367 LEU 131 'engineered mutation' 63 3 2 1A8K LYS B 7 ? UNP P03367 GLN 75 'engineered mutation' 7 4 2 1A8K ILE B 33 ? UNP P03367 LEU 101 'engineered mutation' 33 5 2 1A8K ILE B 63 ? UNP P03367 LEU 131 'engineered mutation' 63 6 3 1A8K LYS D 7 ? UNP P03367 GLN 75 'engineered mutation' 7 7 3 1A8K ILE D 33 ? UNP P03367 LEU 101 'engineered mutation' 33 8 3 1A8K ILE D 63 ? UNP P03367 LEU 131 'engineered mutation' 63 9 4 1A8K LYS E 7 ? UNP P03367 GLN 75 'engineered mutation' 7 10 4 1A8K ILE E 33 ? UNP P03367 LEU 101 'engineered mutation' 33 11 4 1A8K ILE E 63 ? UNP P03367 LEU 131 'engineered mutation' 63 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0Q4 peptide-like . ;N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide ; 'Inhibitor analogues of CA-p2' 'C40 H70 N11 O8 1' 833.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1A8K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.41 _exptl_crystal.description ;THE DATA WAS COLLECTED ON AN R-AXIS IMAGING PLATE DETECTOR MOUNTED ON AN RU200 RIGAKU ROTATING ANODE X-RAY GENERATOR THAT WAS OPERATED AT 50 KV AND 100 MA WITH A 0.5-MM COLLIMATOR. EACH OSCILLATION FRAME WAS EXPOSED FOR 45 MIN. AT ROOM TEMPERATURE WITH 3.0 OSCILLATIONS. THE DISTANCE TO THE DETECTOR PLATE WAS SET AT 100 MM. ; _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.7 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 4.7' # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type RIGAKU _diffrn_detector.pdbx_collection_date 1996-03 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1A8K _reflns.observed_criterion_sigma_I 2. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 8. _reflns.d_resolution_high 2.0 _reflns.number_obs 10077 _reflns.number_all ? _reflns.percent_possible_obs 80.8 _reflns.pdbx_Rmerge_I_obs 0.1009000 _reflns.pdbx_Rsym_value 0.1900000 _reflns.pdbx_netI_over_sigmaI 2. _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.06 _reflns_shell.d_res_low 2.25 _reflns_shell.percent_possible_all 46.6 _reflns_shell.Rmerge_I_obs 0.0920000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 2.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1A8K _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2. _refine.pdbx_data_cutoff_high_absF 100000. _refine.pdbx_data_cutoff_low_absF 0.0 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs 65.7 _refine.ls_R_factor_obs 0.1740000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1740000 _refine.ls_R_factor_R_free 0.3190000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.9 _refine.ls_number_reflns_R_free 1211 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 0.26 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] 0.0 _refine.aniso_B[1][3] 0.0 _refine.aniso_B[2][3] 0.0 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 7HVP' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3032 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 118 _refine_hist.number_atoms_solvent 159 _refine_hist.number_atoms_total 3309 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.02 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.47 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 27.08 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 2.22 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 438 _refine_ls_shell.d_res_high 2.00 _refine_ls_shell.d_res_low 2.09 _refine_ls_shell.number_reflns_R_work 407 _refine_ls_shell.R_factor_R_work 0.3148000 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.4209000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 7.1 _refine_ls_shell.number_reflns_R_free 31 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL TOPH19.SOL 'X-RAY DIFFRACTION' 3 ? NLE.PRO 'X-RAY DIFFRACTION' # _struct.entry_id 1A8K _struct.title ;CRYSTALLOGRAPHIC ANALYSIS OF HUMAN IMMUNODEFICIENCY VIRUS 1 PROTEASE WITH AN ANALOG OF THE CONSERVED CA-P2 SUBSTRATE: INTERACTIONS WITH FREQUENTLY OCCURRING GLUTAMIC ACID RESIDUE AT P2' POSITION OF SUBSTRATES ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1A8K _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'HUMAN IMMUNODEFICIENCY VIRUS PROTEASE, PROTON-MEDIATED INTERACTION, VIRAL MATURATION, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? # loop_ _struct_biol.id _struct_biol.details 1 ? 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 87 ? LEU A 90 ? ARG A 87 LEU A 90 1 ? 4 HELX_P HELX_P2 2 ILE B 66 ? GLY B 68 ? ILE B 66 GLY B 68 5 ? 3 HELX_P HELX_P3 3 ARG B 87 ? ILE B 93 ? ARG B 87 ILE B 93 1 ? 7 HELX_P HELX_P4 4 ARG C 87 ? LEU C 90 ? ARG D 87 LEU D 90 1 ? 4 HELX_P HELX_P5 5 ARG D 87 ? LEU D 90 ? ARG E 87 LEU E 90 1 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? C ? 2 ? D ? 2 ? E ? 4 ? F ? 2 ? G ? 4 ? H ? 3 ? I ? 2 ? J ? 4 ? K ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel I 1 2 ? anti-parallel J 1 2 ? parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel K 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 18 ? LEU A 23 ? GLN A 18 LEU A 23 A 2 LEU A 10 ? ILE A 15 ? LEU A 10 ILE A 15 A 3 ILE A 62 ? ILE A 66 ? ILE A 62 ILE A 66 A 4 HIS A 69 ? GLY A 73 ? HIS A 69 GLY A 73 B 1 LYS A 45 ? GLY A 48 ? LYS A 45 GLY A 48 B 2 PHE A 53 ? VAL A 56 ? PHE A 53 VAL A 56 C 1 ARG A 57 ? TYR A 59 ? ARG A 57 TYR A 59 C 2 VAL A 75 ? VAL A 77 ? VAL A 75 VAL A 77 D 1 LEU B 10 ? ILE B 15 ? LEU B 10 ILE B 15 D 2 GLN B 18 ? LEU B 23 ? GLN B 18 LEU B 23 E 1 THR B 31 ? ILE B 33 ? THR B 31 ILE B 33 E 2 VAL B 75 ? VAL B 77 ? VAL B 75 VAL B 77 E 3 GLY B 52 ? TYR B 59 ? GLY B 52 TYR B 59 E 4 LYS B 43 ? GLY B 49 ? LYS B 43 GLY B 49 F 1 ILE B 62 ? ILE B 66 ? ILE B 62 ILE B 66 F 2 HIS B 69 ? GLY B 73 ? HIS B 69 GLY B 73 G 1 GLN C 18 ? LEU C 23 ? GLN D 18 LEU D 23 G 2 LEU C 10 ? ILE C 15 ? LEU D 10 ILE D 15 G 3 ILE C 62 ? ILE C 66 ? ILE D 62 ILE D 66 G 4 HIS C 69 ? GLY C 73 ? HIS D 69 GLY D 73 H 1 LYS C 43 ? GLY C 49 ? LYS D 43 GLY D 49 H 2 GLY C 52 ? TYR C 59 ? GLY D 52 TYR D 59 H 3 VAL C 75 ? GLY C 78 ? VAL D 75 GLY D 78 I 1 LEU D 10 ? ILE D 15 ? LEU E 10 ILE E 15 I 2 GLN D 18 ? LEU D 23 ? GLN E 18 LEU E 23 J 1 THR D 31 ? GLU D 34 ? THR E 31 GLU E 34 J 2 VAL D 75 ? GLY D 78 ? VAL E 75 GLY E 78 J 3 GLY D 52 ? TYR D 59 ? GLY E 52 TYR E 59 J 4 LYS D 43 ? GLY D 49 ? LYS E 43 GLY E 49 K 1 ILE D 62 ? ILE D 66 ? ILE E 62 ILE E 66 K 2 HIS D 69 ? GLY D 73 ? HIS E 69 GLY E 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLN A 18 ? O GLN A 18 N ILE A 15 ? N ILE A 15 A 2 3 O LYS A 14 ? O LYS A 14 N GLU A 65 ? N GLU A 65 A 3 4 O ILE A 62 ? O ILE A 62 N GLY A 73 ? N GLY A 73 B 1 2 O LYS A 45 ? O LYS A 45 N VAL A 56 ? N VAL A 56 C 1 2 O ARG A 57 ? O ARG A 57 N VAL A 77 ? N VAL A 77 D 1 2 O VAL B 11 ? O VAL B 11 N ALA B 22 ? N ALA B 22 E 1 2 O THR B 31 ? O THR B 31 N LEU B 76 ? N LEU B 76 E 2 3 O VAL B 75 ? O VAL B 75 N TYR B 59 ? N TYR B 59 E 3 4 O GLY B 52 ? O GLY B 52 N GLY B 49 ? N GLY B 49 F 1 2 O ILE B 62 ? O ILE B 62 N GLY B 73 ? N GLY B 73 G 1 2 O GLN C 18 ? O GLN D 18 N ILE C 15 ? N ILE D 15 G 2 3 O LYS C 14 ? O LYS D 14 N GLU C 65 ? N GLU D 65 G 3 4 O ILE C 62 ? O ILE D 62 N GLY C 73 ? N GLY D 73 H 1 2 O LYS C 43 ? O LYS D 43 N GLN C 58 ? N GLN D 58 H 2 3 O ARG C 57 ? O ARG D 57 N VAL C 77 ? N VAL D 77 I 1 2 O VAL D 11 ? O VAL E 11 N ALA D 22 ? N ALA E 22 J 1 2 O THR D 31 ? O THR E 31 N LEU D 76 ? N LEU E 76 J 2 3 O VAL D 75 ? O VAL E 75 N TYR D 59 ? N TYR E 59 J 3 4 O GLY D 52 ? O GLY E 52 N GLY D 49 ? N GLY E 49 K 1 2 O ILE D 62 ? O ILE E 62 N GLY D 73 ? N GLY E 73 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 0Q4 100 ? 23 'BINDING SITE FOR RESIDUE 0Q4 A 100' AC2 Software E 0Q4 100 ? 28 'BINDING SITE FOR RESIDUE 0Q4 E 100' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 ASP A 25 ? ASP A 25 . ? 1_555 ? 2 AC1 23 GLY A 27 ? GLY A 27 . ? 1_555 ? 3 AC1 23 ALA A 28 ? ALA A 28 . ? 1_555 ? 4 AC1 23 ASP A 29 ? ASP A 29 . ? 1_555 ? 5 AC1 23 ASP A 30 ? ASP A 30 . ? 1_555 ? 6 AC1 23 ILE A 47 ? ILE A 47 . ? 1_555 ? 7 AC1 23 GLY A 48 ? GLY A 48 . ? 1_555 ? 8 AC1 23 GLY A 49 ? GLY A 49 . ? 1_555 ? 9 AC1 23 ILE A 50 ? ILE A 50 . ? 1_555 ? 10 AC1 23 LEU A 76 ? LEU A 76 . ? 1_555 ? 11 AC1 23 PRO A 81 ? PRO A 81 . ? 1_555 ? 12 AC1 23 VAL A 82 ? VAL A 82 . ? 1_555 ? 13 AC1 23 ILE A 84 ? ILE A 84 . ? 1_555 ? 14 AC1 23 HOH G . ? HOH A 511 . ? 1_555 ? 15 AC1 23 LEU B 23 ? LEU B 23 . ? 1_555 ? 16 AC1 23 ASP B 25 ? ASP B 25 . ? 1_555 ? 17 AC1 23 GLY B 27 ? GLY B 27 . ? 1_555 ? 18 AC1 23 ALA B 28 ? ALA B 28 . ? 1_555 ? 19 AC1 23 ASP B 29 ? ASP B 29 . ? 1_555 ? 20 AC1 23 GLY B 48 ? GLY B 48 . ? 1_555 ? 21 AC1 23 GLY B 49 ? GLY B 49 . ? 1_555 ? 22 AC1 23 VAL B 82 ? VAL B 82 . ? 1_555 ? 23 AC1 23 ILE B 84 ? ILE B 84 . ? 1_555 ? 24 AC2 28 TRP B 6 ? TRP B 6 . ? 1_455 ? 25 AC2 28 ARG C 8 ? ARG D 8 . ? 1_555 ? 26 AC2 28 ASP C 25 ? ASP D 25 . ? 1_555 ? 27 AC2 28 GLY C 27 ? GLY D 27 . ? 1_555 ? 28 AC2 28 ALA C 28 ? ALA D 28 . ? 1_555 ? 29 AC2 28 ASP C 29 ? ASP D 29 . ? 1_555 ? 30 AC2 28 ASP C 30 ? ASP D 30 . ? 1_555 ? 31 AC2 28 GLY C 48 ? GLY D 48 . ? 1_555 ? 32 AC2 28 ILE C 50 ? ILE D 50 . ? 1_555 ? 33 AC2 28 PRO C 81 ? PRO D 81 . ? 1_555 ? 34 AC2 28 VAL C 82 ? VAL D 82 . ? 1_555 ? 35 AC2 28 ILE C 84 ? ILE D 84 . ? 1_555 ? 36 AC2 28 HOH I . ? HOH D 1767 . ? 1_555 ? 37 AC2 28 LEU D 23 ? LEU E 23 . ? 1_555 ? 38 AC2 28 ASP D 25 ? ASP E 25 . ? 1_555 ? 39 AC2 28 GLY D 27 ? GLY E 27 . ? 1_555 ? 40 AC2 28 ALA D 28 ? ALA E 28 . ? 1_555 ? 41 AC2 28 ASP D 29 ? ASP E 29 . ? 1_555 ? 42 AC2 28 ASP D 30 ? ASP E 30 . ? 1_555 ? 43 AC2 28 VAL D 32 ? VAL E 32 . ? 1_555 ? 44 AC2 28 LYS D 45 ? LYS E 45 . ? 1_555 ? 45 AC2 28 MET D 46 ? MET E 46 . ? 1_555 ? 46 AC2 28 ILE D 47 ? ILE E 47 . ? 1_555 ? 47 AC2 28 GLY D 48 ? GLY E 48 . ? 1_555 ? 48 AC2 28 GLY D 49 ? GLY E 49 . ? 1_555 ? 49 AC2 28 ILE D 50 ? ILE E 50 . ? 1_555 ? 50 AC2 28 PHE D 53 ? PHE E 53 . ? 1_555 ? 51 AC2 28 HOH J . ? HOH E 1511 . ? 1_555 ? # _database_PDB_matrix.entry_id 1A8K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1A8K _atom_sites.fract_transf_matrix[1][1] 0.016779 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019157 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016207 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 1 PRO PRO A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 SER 37 37 37 SER SER A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 ARG 41 41 41 ARG ARG A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 MET 46 46 46 MET MET A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 HIS 69 69 69 HIS HIS A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASN 83 83 83 ASN ASN A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 CYS 95 95 95 CYS CYS A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 THR 4 4 4 THR THR B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 TRP 6 6 6 TRP TRP B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ARG 8 8 8 ARG ARG B . n B 1 9 PRO 9 9 9 PRO PRO B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 GLY 17 17 17 GLY GLY B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 GLU 21 21 21 GLU GLU B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 ASP 30 30 30 ASP ASP B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 MET 36 36 36 MET MET B . n B 1 37 SER 37 37 37 SER SER B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 PRO 39 39 39 PRO PRO B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 ARG 41 41 41 ARG ARG B . n B 1 42 TRP 42 42 42 TRP TRP B . n B 1 43 LYS 43 43 43 LYS LYS B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 MET 46 46 46 MET MET B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 GLY 48 48 48 GLY GLY B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 GLY 51 51 51 GLY GLY B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 ILE 54 54 54 ILE ILE B . n B 1 55 LYS 55 55 55 LYS LYS B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 ASP 60 60 60 ASP ASP B . n B 1 61 GLN 61 61 61 GLN GLN B . n B 1 62 ILE 62 62 62 ILE ILE B . n B 1 63 ILE 63 63 63 ILE ILE B . n B 1 64 ILE 64 64 64 ILE ILE B . n B 1 65 GLU 65 65 65 GLU GLU B . n B 1 66 ILE 66 66 66 ILE ILE B . n B 1 67 CYS 67 67 67 CYS CYS B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 HIS 69 69 69 HIS HIS B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 ALA 71 71 71 ALA ALA B . n B 1 72 ILE 72 72 72 ILE ILE B . n B 1 73 GLY 73 73 73 GLY GLY B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 THR 80 80 80 THR THR B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 VAL 82 82 82 VAL VAL B . n B 1 83 ASN 83 83 83 ASN ASN B . n B 1 84 ILE 84 84 84 ILE ILE B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 GLY 86 86 86 GLY GLY B . n B 1 87 ARG 87 87 87 ARG ARG B . n B 1 88 ASN 88 88 88 ASN ASN B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 LEU 90 90 90 LEU LEU B . n B 1 91 THR 91 91 91 THR THR B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 GLY 94 94 94 GLY GLY B . n B 1 95 CYS 95 95 95 CYS CYS B . n B 1 96 THR 96 96 96 THR THR B . n B 1 97 LEU 97 97 97 LEU LEU B . n B 1 98 ASN 98 98 98 ASN ASN B . n B 1 99 PHE 99 99 99 PHE PHE B . n C 1 1 PRO 1 1 1 PRO PRO D . n C 1 2 GLN 2 2 2 GLN GLN D . n C 1 3 ILE 3 3 3 ILE ILE D . n C 1 4 THR 4 4 4 THR THR D . n C 1 5 LEU 5 5 5 LEU LEU D . n C 1 6 TRP 6 6 6 TRP TRP D . n C 1 7 LYS 7 7 7 LYS LYS D . n C 1 8 ARG 8 8 8 ARG ARG D . n C 1 9 PRO 9 9 9 PRO PRO D . n C 1 10 LEU 10 10 10 LEU LEU D . n C 1 11 VAL 11 11 11 VAL VAL D . n C 1 12 THR 12 12 12 THR THR D . n C 1 13 ILE 13 13 13 ILE ILE D . n C 1 14 LYS 14 14 14 LYS LYS D . n C 1 15 ILE 15 15 15 ILE ILE D . n C 1 16 GLY 16 16 16 GLY GLY D . n C 1 17 GLY 17 17 17 GLY GLY D . n C 1 18 GLN 18 18 18 GLN GLN D . n C 1 19 LEU 19 19 19 LEU LEU D . n C 1 20 LYS 20 20 20 LYS LYS D . n C 1 21 GLU 21 21 21 GLU GLU D . n C 1 22 ALA 22 22 22 ALA ALA D . n C 1 23 LEU 23 23 23 LEU LEU D . n C 1 24 LEU 24 24 24 LEU LEU D . n C 1 25 ASP 25 25 25 ASP ASP D . n C 1 26 THR 26 26 26 THR THR D . n C 1 27 GLY 27 27 27 GLY GLY D . n C 1 28 ALA 28 28 28 ALA ALA D . n C 1 29 ASP 29 29 29 ASP ASP D . n C 1 30 ASP 30 30 30 ASP ASP D . n C 1 31 THR 31 31 31 THR THR D . n C 1 32 VAL 32 32 32 VAL VAL D . n C 1 33 ILE 33 33 33 ILE ILE D . n C 1 34 GLU 34 34 34 GLU GLU D . n C 1 35 GLU 35 35 35 GLU GLU D . n C 1 36 MET 36 36 36 MET MET D . n C 1 37 SER 37 37 37 SER SER D . n C 1 38 LEU 38 38 38 LEU LEU D . n C 1 39 PRO 39 39 39 PRO PRO D . n C 1 40 GLY 40 40 40 GLY GLY D . n C 1 41 ARG 41 41 41 ARG ARG D . n C 1 42 TRP 42 42 42 TRP TRP D . n C 1 43 LYS 43 43 43 LYS LYS D . n C 1 44 PRO 44 44 44 PRO PRO D . n C 1 45 LYS 45 45 45 LYS LYS D . n C 1 46 MET 46 46 46 MET MET D . n C 1 47 ILE 47 47 47 ILE ILE D . n C 1 48 GLY 48 48 48 GLY GLY D . n C 1 49 GLY 49 49 49 GLY GLY D . n C 1 50 ILE 50 50 50 ILE ILE D . n C 1 51 GLY 51 51 51 GLY GLY D . n C 1 52 GLY 52 52 52 GLY GLY D . n C 1 53 PHE 53 53 53 PHE PHE D . n C 1 54 ILE 54 54 54 ILE ILE D . n C 1 55 LYS 55 55 55 LYS LYS D . n C 1 56 VAL 56 56 56 VAL VAL D . n C 1 57 ARG 57 57 57 ARG ARG D . n C 1 58 GLN 58 58 58 GLN GLN D . n C 1 59 TYR 59 59 59 TYR TYR D . n C 1 60 ASP 60 60 60 ASP ASP D . n C 1 61 GLN 61 61 61 GLN GLN D . n C 1 62 ILE 62 62 62 ILE ILE D . n C 1 63 ILE 63 63 63 ILE ILE D . n C 1 64 ILE 64 64 64 ILE ILE D . n C 1 65 GLU 65 65 65 GLU GLU D . n C 1 66 ILE 66 66 66 ILE ILE D . n C 1 67 CYS 67 67 67 CYS CYS D . n C 1 68 GLY 68 68 68 GLY GLY D . n C 1 69 HIS 69 69 69 HIS HIS D . n C 1 70 LYS 70 70 70 LYS LYS D . n C 1 71 ALA 71 71 71 ALA ALA D . n C 1 72 ILE 72 72 72 ILE ILE D . n C 1 73 GLY 73 73 73 GLY GLY D . n C 1 74 THR 74 74 74 THR THR D . n C 1 75 VAL 75 75 75 VAL VAL D . n C 1 76 LEU 76 76 76 LEU LEU D . n C 1 77 VAL 77 77 77 VAL VAL D . n C 1 78 GLY 78 78 78 GLY GLY D . n C 1 79 PRO 79 79 79 PRO PRO D . n C 1 80 THR 80 80 80 THR THR D . n C 1 81 PRO 81 81 81 PRO PRO D . n C 1 82 VAL 82 82 82 VAL VAL D . n C 1 83 ASN 83 83 83 ASN ASN D . n C 1 84 ILE 84 84 84 ILE ILE D . n C 1 85 ILE 85 85 85 ILE ILE D . n C 1 86 GLY 86 86 86 GLY GLY D . n C 1 87 ARG 87 87 87 ARG ARG D . n C 1 88 ASN 88 88 88 ASN ASN D . n C 1 89 LEU 89 89 89 LEU LEU D . n C 1 90 LEU 90 90 90 LEU LEU D . n C 1 91 THR 91 91 91 THR THR D . n C 1 92 GLN 92 92 92 GLN GLN D . n C 1 93 ILE 93 93 93 ILE ILE D . n C 1 94 GLY 94 94 94 GLY GLY D . n C 1 95 CYS 95 95 95 CYS CYS D . n C 1 96 THR 96 96 96 THR THR D . n C 1 97 LEU 97 97 97 LEU LEU D . n C 1 98 ASN 98 98 98 ASN ASN D . n C 1 99 PHE 99 99 99 PHE PHE D . n D 1 1 PRO 1 1 1 PRO PRO E . n D 1 2 GLN 2 2 2 GLN GLN E . n D 1 3 ILE 3 3 3 ILE ILE E . n D 1 4 THR 4 4 4 THR THR E . n D 1 5 LEU 5 5 5 LEU LEU E . n D 1 6 TRP 6 6 6 TRP TRP E . n D 1 7 LYS 7 7 7 LYS LYS E . n D 1 8 ARG 8 8 8 ARG ARG E . n D 1 9 PRO 9 9 9 PRO PRO E . n D 1 10 LEU 10 10 10 LEU LEU E . n D 1 11 VAL 11 11 11 VAL VAL E . n D 1 12 THR 12 12 12 THR THR E . n D 1 13 ILE 13 13 13 ILE ILE E . n D 1 14 LYS 14 14 14 LYS LYS E . n D 1 15 ILE 15 15 15 ILE ILE E . n D 1 16 GLY 16 16 16 GLY GLY E . n D 1 17 GLY 17 17 17 GLY GLY E . n D 1 18 GLN 18 18 18 GLN GLN E . n D 1 19 LEU 19 19 19 LEU LEU E . n D 1 20 LYS 20 20 20 LYS LYS E . n D 1 21 GLU 21 21 21 GLU GLU E . n D 1 22 ALA 22 22 22 ALA ALA E . n D 1 23 LEU 23 23 23 LEU LEU E . n D 1 24 LEU 24 24 24 LEU LEU E . n D 1 25 ASP 25 25 25 ASP ASP E . n D 1 26 THR 26 26 26 THR THR E . n D 1 27 GLY 27 27 27 GLY GLY E . n D 1 28 ALA 28 28 28 ALA ALA E . n D 1 29 ASP 29 29 29 ASP ASP E . n D 1 30 ASP 30 30 30 ASP ASP E . n D 1 31 THR 31 31 31 THR THR E . n D 1 32 VAL 32 32 32 VAL VAL E . n D 1 33 ILE 33 33 33 ILE ILE E . n D 1 34 GLU 34 34 34 GLU GLU E . n D 1 35 GLU 35 35 35 GLU GLU E . n D 1 36 MET 36 36 36 MET MET E . n D 1 37 SER 37 37 37 SER SER E . n D 1 38 LEU 38 38 38 LEU LEU E . n D 1 39 PRO 39 39 39 PRO PRO E . n D 1 40 GLY 40 40 40 GLY GLY E . n D 1 41 ARG 41 41 41 ARG ARG E . n D 1 42 TRP 42 42 42 TRP TRP E . n D 1 43 LYS 43 43 43 LYS LYS E . n D 1 44 PRO 44 44 44 PRO PRO E . n D 1 45 LYS 45 45 45 LYS LYS E . n D 1 46 MET 46 46 46 MET MET E . n D 1 47 ILE 47 47 47 ILE ILE E . n D 1 48 GLY 48 48 48 GLY GLY E . n D 1 49 GLY 49 49 49 GLY GLY E . n D 1 50 ILE 50 50 50 ILE ILE E . n D 1 51 GLY 51 51 51 GLY GLY E . n D 1 52 GLY 52 52 52 GLY GLY E . n D 1 53 PHE 53 53 53 PHE PHE E . n D 1 54 ILE 54 54 54 ILE ILE E . n D 1 55 LYS 55 55 55 LYS LYS E . n D 1 56 VAL 56 56 56 VAL VAL E . n D 1 57 ARG 57 57 57 ARG ARG E . n D 1 58 GLN 58 58 58 GLN GLN E . n D 1 59 TYR 59 59 59 TYR TYR E . n D 1 60 ASP 60 60 60 ASP ASP E . n D 1 61 GLN 61 61 61 GLN GLN E . n D 1 62 ILE 62 62 62 ILE ILE E . n D 1 63 ILE 63 63 63 ILE ILE E . n D 1 64 ILE 64 64 64 ILE ILE E . n D 1 65 GLU 65 65 65 GLU GLU E . n D 1 66 ILE 66 66 66 ILE ILE E . n D 1 67 CYS 67 67 67 CYS CYS E . n D 1 68 GLY 68 68 68 GLY GLY E . n D 1 69 HIS 69 69 69 HIS HIS E . n D 1 70 LYS 70 70 70 LYS LYS E . n D 1 71 ALA 71 71 71 ALA ALA E . n D 1 72 ILE 72 72 72 ILE ILE E . n D 1 73 GLY 73 73 73 GLY GLY E . n D 1 74 THR 74 74 74 THR THR E . n D 1 75 VAL 75 75 75 VAL VAL E . n D 1 76 LEU 76 76 76 LEU LEU E . n D 1 77 VAL 77 77 77 VAL VAL E . n D 1 78 GLY 78 78 78 GLY GLY E . n D 1 79 PRO 79 79 79 PRO PRO E . n D 1 80 THR 80 80 80 THR THR E . n D 1 81 PRO 81 81 81 PRO PRO E . n D 1 82 VAL 82 82 82 VAL VAL E . n D 1 83 ASN 83 83 83 ASN ASN E . n D 1 84 ILE 84 84 84 ILE ILE E . n D 1 85 ILE 85 85 85 ILE ILE E . n D 1 86 GLY 86 86 86 GLY GLY E . n D 1 87 ARG 87 87 87 ARG ARG E . n D 1 88 ASN 88 88 88 ASN ASN E . n D 1 89 LEU 89 89 89 LEU LEU E . n D 1 90 LEU 90 90 90 LEU LEU E . n D 1 91 THR 91 91 91 THR THR E . n D 1 92 GLN 92 92 92 GLN GLN E . n D 1 93 ILE 93 93 93 ILE ILE E . n D 1 94 GLY 94 94 94 GLY GLY E . n D 1 95 CYS 95 95 95 CYS CYS E . n D 1 96 THR 96 96 96 THR THR E . n D 1 97 LEU 97 97 97 LEU LEU E . n D 1 98 ASN 98 98 98 ASN ASN E . n D 1 99 PHE 99 99 99 PHE PHE E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 0Q4 1 100 1 0Q4 ARG A . F 2 0Q4 1 100 1 0Q4 ARG E . G 3 HOH 1 403 403 HOH HOH A . G 3 HOH 2 404 404 HOH HOH A . G 3 HOH 3 405 405 HOH HOH A . G 3 HOH 4 410 410 HOH HOH A . G 3 HOH 5 412 412 HOH HOH A . G 3 HOH 6 413 413 HOH HOH A . G 3 HOH 7 431 431 HOH HOH A . G 3 HOH 8 501 501 HOH HOH A . G 3 HOH 9 507 507 HOH HOH A . G 3 HOH 10 511 511 HOH HOH A . G 3 HOH 11 526 526 HOH HOH A . G 3 HOH 12 603 603 HOH HOH A . G 3 HOH 13 614 614 HOH HOH A . G 3 HOH 14 633 633 HOH HOH A . G 3 HOH 15 700 700 HOH HOH A . G 3 HOH 16 701 701 HOH HOH A . G 3 HOH 17 703 703 HOH HOH A . G 3 HOH 18 704 704 HOH HOH A . G 3 HOH 19 706 706 HOH HOH A . G 3 HOH 20 708 708 HOH HOH A . G 3 HOH 21 715 715 HOH HOH A . G 3 HOH 22 722 722 HOH HOH A . G 3 HOH 23 724 724 HOH HOH A . G 3 HOH 24 727 727 HOH HOH A . G 3 HOH 25 728 728 HOH HOH A . G 3 HOH 26 729 729 HOH HOH A . G 3 HOH 27 732 732 HOH HOH A . G 3 HOH 28 742 742 HOH HOH A . G 3 HOH 29 746 746 HOH HOH A . G 3 HOH 30 749 749 HOH HOH A . G 3 HOH 31 750 750 HOH HOH A . G 3 HOH 32 760 760 HOH HOH A . G 3 HOH 33 765 765 HOH HOH A . G 3 HOH 34 766 766 HOH HOH A . G 3 HOH 35 771 771 HOH HOH A . G 3 HOH 36 1548 1548 HOH HOH A . H 3 HOH 1 407 407 HOH HOH B . H 3 HOH 2 420 420 HOH HOH B . H 3 HOH 3 423 423 HOH HOH B . H 3 HOH 4 424 424 HOH HOH B . H 3 HOH 5 428 428 HOH HOH B . H 3 HOH 6 429 429 HOH HOH B . H 3 HOH 7 434 434 HOH HOH B . H 3 HOH 8 515 515 HOH HOH B . H 3 HOH 9 519 519 HOH HOH B . H 3 HOH 10 548 548 HOH HOH B . H 3 HOH 11 555 555 HOH HOH B . H 3 HOH 12 556 556 HOH HOH B . H 3 HOH 13 601 601 HOH HOH B . H 3 HOH 14 611 611 HOH HOH B . H 3 HOH 15 624 624 HOH HOH B . H 3 HOH 16 625 625 HOH HOH B . H 3 HOH 17 647 647 HOH HOH B . H 3 HOH 18 711 711 HOH HOH B . H 3 HOH 19 712 712 HOH HOH B . H 3 HOH 20 716 716 HOH HOH B . H 3 HOH 21 730 730 HOH HOH B . H 3 HOH 22 734 734 HOH HOH B . H 3 HOH 23 735 735 HOH HOH B . H 3 HOH 24 736 736 HOH HOH B . H 3 HOH 25 737 737 HOH HOH B . H 3 HOH 26 740 740 HOH HOH B . H 3 HOH 27 743 743 HOH HOH B . H 3 HOH 28 751 751 HOH HOH B . H 3 HOH 29 752 752 HOH HOH B . H 3 HOH 30 754 754 HOH HOH B . H 3 HOH 31 758 758 HOH HOH B . H 3 HOH 32 762 762 HOH HOH B . H 3 HOH 33 768 768 HOH HOH B . H 3 HOH 34 770 770 HOH HOH B . H 3 HOH 35 772 772 HOH HOH B . H 3 HOH 36 1704 1704 HOH HOH B . H 3 HOH 37 1750 1750 HOH HOH B . H 3 HOH 38 1766 1766 HOH HOH B . I 3 HOH 1 617 617 HOH HOH D . I 3 HOH 2 1402 1402 HOH HOH D . I 3 HOH 3 1403 1403 HOH HOH D . I 3 HOH 4 1404 1404 HOH HOH D . I 3 HOH 5 1405 1405 HOH HOH D . I 3 HOH 6 1406 1406 HOH HOH D . I 3 HOH 7 1410 1410 HOH HOH D . I 3 HOH 8 1412 1412 HOH HOH D . I 3 HOH 9 1413 1413 HOH HOH D . I 3 HOH 10 1414 1414 HOH HOH D . I 3 HOH 11 1431 1431 HOH HOH D . I 3 HOH 12 1441 1441 HOH HOH D . I 3 HOH 13 1507 1507 HOH HOH D . I 3 HOH 14 1515 1515 HOH HOH D . I 3 HOH 15 1526 1526 HOH HOH D . I 3 HOH 16 1603 1603 HOH HOH D . I 3 HOH 17 1614 1614 HOH HOH D . I 3 HOH 18 1633 1633 HOH HOH D . I 3 HOH 19 1645 1645 HOH HOH D . I 3 HOH 20 1647 1647 HOH HOH D . I 3 HOH 21 1700 1700 HOH HOH D . I 3 HOH 22 1701 1701 HOH HOH D . I 3 HOH 23 1703 1703 HOH HOH D . I 3 HOH 24 1706 1706 HOH HOH D . I 3 HOH 25 1709 1709 HOH HOH D . I 3 HOH 26 1724 1724 HOH HOH D . I 3 HOH 27 1726 1726 HOH HOH D . I 3 HOH 28 1727 1727 HOH HOH D . I 3 HOH 29 1729 1729 HOH HOH D . I 3 HOH 30 1731 1731 HOH HOH D . I 3 HOH 31 1732 1732 HOH HOH D . I 3 HOH 32 1742 1742 HOH HOH D . I 3 HOH 33 1746 1746 HOH HOH D . I 3 HOH 34 1747 1747 HOH HOH D . I 3 HOH 35 1748 1748 HOH HOH D . I 3 HOH 36 1749 1749 HOH HOH D . I 3 HOH 37 1764 1764 HOH HOH D . I 3 HOH 38 1765 1765 HOH HOH D . I 3 HOH 39 1767 1767 HOH HOH D . I 3 HOH 40 1771 1771 HOH HOH D . J 3 HOH 1 402 402 HOH HOH E . J 3 HOH 2 747 747 HOH HOH E . J 3 HOH 3 1407 1407 HOH HOH E . J 3 HOH 4 1408 1408 HOH HOH E . J 3 HOH 5 1409 1409 HOH HOH E . J 3 HOH 6 1411 1411 HOH HOH E . J 3 HOH 7 1420 1420 HOH HOH E . J 3 HOH 8 1423 1423 HOH HOH E . J 3 HOH 9 1424 1424 HOH HOH E . J 3 HOH 10 1428 1428 HOH HOH E . J 3 HOH 11 1429 1429 HOH HOH E . J 3 HOH 12 1434 1434 HOH HOH E . J 3 HOH 13 1438 1438 HOH HOH E . J 3 HOH 14 1501 1501 HOH HOH E . J 3 HOH 15 1511 1511 HOH HOH E . J 3 HOH 16 1519 1519 HOH HOH E . J 3 HOH 17 1555 1555 HOH HOH E . J 3 HOH 18 1556 1556 HOH HOH E . J 3 HOH 19 1601 1601 HOH HOH E . J 3 HOH 20 1611 1611 HOH HOH E . J 3 HOH 21 1617 1617 HOH HOH E . J 3 HOH 22 1711 1711 HOH HOH E . J 3 HOH 23 1712 1712 HOH HOH E . J 3 HOH 24 1715 1715 HOH HOH E . J 3 HOH 25 1716 1716 HOH HOH E . J 3 HOH 26 1722 1722 HOH HOH E . J 3 HOH 27 1728 1728 HOH HOH E . J 3 HOH 28 1730 1730 HOH HOH E . J 3 HOH 29 1734 1734 HOH HOH E . J 3 HOH 30 1735 1735 HOH HOH E . J 3 HOH 31 1736 1736 HOH HOH E . J 3 HOH 32 1737 1737 HOH HOH E . J 3 HOH 33 1739 1739 HOH HOH E . J 3 HOH 34 1740 1740 HOH HOH E . J 3 HOH 35 1741 1741 HOH HOH E . J 3 HOH 36 1743 1743 HOH HOH E . J 3 HOH 37 1754 1754 HOH HOH E . J 3 HOH 38 1755 1755 HOH HOH E . J 3 HOH 39 1758 1758 HOH HOH E . J 3 HOH 40 1760 1760 HOH HOH E . J 3 HOH 41 1761 1761 HOH HOH E . J 3 HOH 42 1762 1762 HOH HOH E . J 3 HOH 43 1768 1768 HOH HOH E . J 3 HOH 44 1770 1770 HOH HOH E . J 3 HOH 45 1772 1772 HOH HOH E . # _pdbx_molecule_features.prd_id PRD_000349 _pdbx_molecule_features.name ;N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl- L-alanyl-L-norleucinamide ; _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000349 E 2 PRD_000349 F # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,G,H 2 1 C,D,F,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5390 ? 1 MORE -30 ? 1 'SSA (A^2)' 9170 ? 2 'ABSA (A^2)' 5420 ? 2 MORE -33 ? 2 'SSA (A^2)' 9150 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-01-13 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2021-11-03 6 'Structure model' 1 5 2023-08-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' Other 12 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' database_2 2 5 'Structure model' pdbx_database_status 3 5 'Structure model' struct_ref_seq_dif 4 5 'Structure model' struct_site 5 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_database_status.process_site' 4 5 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.1 ? 1 X-PLOR refinement 3.1 ? 2 R-AXIS 'data reduction' . ? 3 R-AXIS 'data scaling' . ? 4 X-PLOR phasing 3.1 ? 5 # _pdbx_entry_details.entry_id 1A8K _pdbx_entry_details.sequence_details ;MUTATIONS Q7K, L33I, L63I HAVE BEEN MADE TO STABILIZE THE PROTEASE FROM AUTOPROTEOLYSIS, WHILE RETAINING ACTIVITY SIMILAR TO WILD-TYPE HIV-1 PROTEASE ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;PEPTIDE INHIBITOR 0Q4 HAS A REDUCED PEPTIDE (-CH2-NH) INSTEAD OF THE NORMAL PEPTIDE LINK (-CO-NH). ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HH21 A ARG 57 ? ? HH A TYR 59 ? ? 1.17 2 1 O D HOH 1647 ? ? H2 E HOH 1601 ? ? 1.48 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 CYS _pdbx_validate_rmsd_bond.auth_seq_id_1 95 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 SG _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 CYS _pdbx_validate_rmsd_bond.auth_seq_id_2 95 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.710 _pdbx_validate_rmsd_bond.bond_target_value 1.812 _pdbx_validate_rmsd_bond.bond_deviation -0.102 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 8 ? ? CZ A ARG 8 ? ? NH1 A ARG 8 ? ? 116.95 120.30 -3.35 0.50 N 2 1 C A GLY 78 ? ? N A PRO 79 ? ? CA A PRO 79 ? ? 129.95 119.30 10.65 1.50 Y 3 1 CA A CYS 95 ? ? CB A CYS 95 ? ? SG A CYS 95 ? ? 123.06 114.20 8.86 1.10 N 4 1 C B GLY 78 ? ? N B PRO 79 ? ? CA B PRO 79 ? ? 129.58 119.30 10.28 1.50 Y 5 1 C D GLY 78 ? ? N D PRO 79 ? ? CA D PRO 79 ? ? 129.49 119.30 10.19 1.50 Y 6 1 CB E ASP 25 ? ? CG E ASP 25 ? ? OD1 E ASP 25 ? ? 125.22 118.30 6.92 0.90 N 7 1 CA E CYS 67 ? ? CB E CYS 67 ? ? SG E CYS 67 ? ? 125.11 114.20 10.91 1.10 N 8 1 CB E VAL 82 ? ? CA E VAL 82 ? ? C E VAL 82 ? ? 98.52 111.40 -12.88 1.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 9 ? ? -57.81 66.93 2 1 PRO A 44 ? ? -45.38 150.67 3 1 PRO B 9 ? ? -67.74 65.35 4 1 GLU B 65 ? ? -118.16 77.21 5 1 ILE B 66 ? ? -58.70 103.60 6 1 CYS B 67 ? ? 36.35 74.64 7 1 PRO B 79 ? ? -61.87 56.03 8 1 PRO D 9 ? ? -65.13 81.13 9 1 GLU D 34 ? ? -56.08 174.80 10 1 GLN D 61 ? ? 37.42 42.80 11 1 PRO D 79 ? ? -78.12 47.81 12 1 ILE D 93 ? ? -95.41 30.16 13 1 PRO E 9 ? ? -67.87 54.18 14 1 GLU E 35 ? ? -15.70 112.05 15 1 CYS E 67 ? ? 41.76 73.96 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id PHE _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 99 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.080 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 ;N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide ; 0Q4 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7HVP _pdbx_initial_refinement_model.details 'PDB ENTRY 7HVP' #