data_1AVP # _entry.id 1AVP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.292 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1AVP WWPDB D_1000171314 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1AVP _pdbx_database_status.recvd_initial_deposition_date 1996-04-04 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ding, J.' 1 'Mcgrath, W.J.' 2 'Sweet, R.M.' 3 'Mangel, W.F.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of the human adenovirus proteinase with its 11 amino acid cofactor.' 'EMBO J.' 15 1778 1783 1996 EMJODG UK 0261-4189 0897 ? 8617222 ? 1 'Characterization of the Human Adenovirus Proteinase Activity in Disrupted Virus Particles' 'To be Published' ? ? ? ? ? ? ? 0353 ? ? ? 2 'Characterization of Three Components of Human Adenovirus Activity in Vitro' J.Biol.Chem. 271 536 ? 1996 JBCHA3 US 0021-9258 0071 ? ? ? 3 'Viral DNA and a Viral Peptide Can Act as Cofactors of Adenovirus Virion Proteinase Activity' Nature 361 274 ? 1993 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ding, J.' 1 primary 'McGrath, W.J.' 2 primary 'Sweet, R.M.' 3 primary 'Mangel, W.F.' 4 1 'Mcgrath, W.J.' 5 1 'Abola, A.P.' 6 1 'Toledo, D.L.' 7 1 'Brown, M.T.' 8 1 'Mangel, W.F.' 9 2 'Mangel, W.F.' 10 2 'Toledo, D.L.' 11 2 'Brown, M.T.' 12 2 'Martin, J.H.' 13 2 'Mcgrath, W.J.' 14 3 'Mangel, W.F.' 15 3 'Mcgrath, W.J.' 16 3 'Toledo, D.L.' 17 3 'Anderson, C.W.' 18 # _cell.entry_id 1AVP _cell.length_a 114.300 _cell.length_b 114.300 _cell.length_c 50.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1AVP _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ADENOVIRAL PROTEINASE' 23114.350 1 ? ? MAIN 'PVIC PEPTIDE COFACTOR DISULFIDE BONDS TO CYS104 OF AVP' 2 polymer syn 'ADENOVIRAL PROTEINASE' 1353.640 1 ? ? PEPT 'PVIC PEPTIDE IS CHEMICALLY SYNTHESIZED PVIC PEPTIDE COFACTOR DISULFIDE BONDS TO CYS104 OF AVP' 3 water nat water 18.015 45 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 AVP 2 PVIC # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSEQELKAIVKDLGCGPYFLGTYDKRFPGFVSPHKLACAIVNTAGRETGGVHWMAFAWNPRSKTCYLFEPFGFSDQRL KQVYQFEYESLLRRSAIASSPDRCITLEKSTQSVQGPNSAACGLFCCMFLHAFANWPQTPMDHNPTMNLITGVPNSMLNS PQVQPTLRRNQEQLYSFLERHSPYFRSHSAQIRSATSFCHLKNM ; ;MGSSEQELKAIVKDLGCGPYFLGTYDKRFPGFVSPHKLACAIVNTAGRETGGVHWMAFAWNPRSKTCYLFEPFGFSDQRL KQVYQFEYESLLRRSAIASSPDRCITLEKSTQSVQGPNSAACGLFCCMFLHAFANWPQTPMDHNPTMNLITGVPNSMLNS PQVQPTLRRNQEQLYSFLERHSPYFRSHSAQIRSATSFCHLKNM ; A ? 2 'polypeptide(L)' no no GVQSLKRRRCF GVQSLKRRRCF B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 GLU n 1 6 GLN n 1 7 GLU n 1 8 LEU n 1 9 LYS n 1 10 ALA n 1 11 ILE n 1 12 VAL n 1 13 LYS n 1 14 ASP n 1 15 LEU n 1 16 GLY n 1 17 CYS n 1 18 GLY n 1 19 PRO n 1 20 TYR n 1 21 PHE n 1 22 LEU n 1 23 GLY n 1 24 THR n 1 25 TYR n 1 26 ASP n 1 27 LYS n 1 28 ARG n 1 29 PHE n 1 30 PRO n 1 31 GLY n 1 32 PHE n 1 33 VAL n 1 34 SER n 1 35 PRO n 1 36 HIS n 1 37 LYS n 1 38 LEU n 1 39 ALA n 1 40 CYS n 1 41 ALA n 1 42 ILE n 1 43 VAL n 1 44 ASN n 1 45 THR n 1 46 ALA n 1 47 GLY n 1 48 ARG n 1 49 GLU n 1 50 THR n 1 51 GLY n 1 52 GLY n 1 53 VAL n 1 54 HIS n 1 55 TRP n 1 56 MET n 1 57 ALA n 1 58 PHE n 1 59 ALA n 1 60 TRP n 1 61 ASN n 1 62 PRO n 1 63 ARG n 1 64 SER n 1 65 LYS n 1 66 THR n 1 67 CYS n 1 68 TYR n 1 69 LEU n 1 70 PHE n 1 71 GLU n 1 72 PRO n 1 73 PHE n 1 74 GLY n 1 75 PHE n 1 76 SER n 1 77 ASP n 1 78 GLN n 1 79 ARG n 1 80 LEU n 1 81 LYS n 1 82 GLN n 1 83 VAL n 1 84 TYR n 1 85 GLN n 1 86 PHE n 1 87 GLU n 1 88 TYR n 1 89 GLU n 1 90 SER n 1 91 LEU n 1 92 LEU n 1 93 ARG n 1 94 ARG n 1 95 SER n 1 96 ALA n 1 97 ILE n 1 98 ALA n 1 99 SER n 1 100 SER n 1 101 PRO n 1 102 ASP n 1 103 ARG n 1 104 CYS n 1 105 ILE n 1 106 THR n 1 107 LEU n 1 108 GLU n 1 109 LYS n 1 110 SER n 1 111 THR n 1 112 GLN n 1 113 SER n 1 114 VAL n 1 115 GLN n 1 116 GLY n 1 117 PRO n 1 118 ASN n 1 119 SER n 1 120 ALA n 1 121 ALA n 1 122 CYS n 1 123 GLY n 1 124 LEU n 1 125 PHE n 1 126 CYS n 1 127 CYS n 1 128 MET n 1 129 PHE n 1 130 LEU n 1 131 HIS n 1 132 ALA n 1 133 PHE n 1 134 ALA n 1 135 ASN n 1 136 TRP n 1 137 PRO n 1 138 GLN n 1 139 THR n 1 140 PRO n 1 141 MET n 1 142 ASP n 1 143 HIS n 1 144 ASN n 1 145 PRO n 1 146 THR n 1 147 MET n 1 148 ASN n 1 149 LEU n 1 150 ILE n 1 151 THR n 1 152 GLY n 1 153 VAL n 1 154 PRO n 1 155 ASN n 1 156 SER n 1 157 MET n 1 158 LEU n 1 159 ASN n 1 160 SER n 1 161 PRO n 1 162 GLN n 1 163 VAL n 1 164 GLN n 1 165 PRO n 1 166 THR n 1 167 LEU n 1 168 ARG n 1 169 ARG n 1 170 ASN n 1 171 GLN n 1 172 GLU n 1 173 GLN n 1 174 LEU n 1 175 TYR n 1 176 SER n 1 177 PHE n 1 178 LEU n 1 179 GLU n 1 180 ARG n 1 181 HIS n 1 182 SER n 1 183 PRO n 1 184 TYR n 1 185 PHE n 1 186 ARG n 1 187 SER n 1 188 HIS n 1 189 SER n 1 190 ALA n 1 191 GLN n 1 192 ILE n 1 193 ARG n 1 194 SER n 1 195 ALA n 1 196 THR n 1 197 SER n 1 198 PHE n 1 199 CYS n 1 200 HIS n 1 201 LEU n 1 202 LYS n 1 203 ASN n 1 204 MET n 2 1 GLY n 2 2 VAL n 2 3 GLN n 2 4 SER n 2 5 LEU n 2 6 LYS n 2 7 ARG n 2 8 ARG n 2 9 ARG n 2 10 CYS n 2 11 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Mastadenovirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Human adenovirus C' _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment MAIN _entity_src_gen.pdbx_gene_src_scientific_name 'Human adenovirus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10515 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant DE3 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PET _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET 13' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Human adenovirus C' _pdbx_entity_src_syn.organism_common_name Mastadenovirus _pdbx_entity_src_syn.ncbi_taxonomy_id 10515 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP ADEN_ADE02 1 P03252 1 ;MGSSEQELKAIVKDLGCGPYFLGTYDKRFPGFVSPHKLACAIVNTAGRETGGVHWMAFAWNPRSKTCYLFEPFGFSDQRL KQVYQFEYESLLRRSAIASSPDRCITLEKSTQSVQGPNSAACGLFCCMFLHAFANWPQTPMDHNPTMNLITGVPNSMLNS PQVQPTLRRNQEQLYSFLERHSPYFRSHSAQIRSATSFCHLKNM ; ? 2 UNP PIV6_ADE02 2 P03274 1 ;MEDINFASLAPRHGSRPFMGNWQDIGTSNMSGGAFSWGSLWSGIKNFGSTIKNYGSKAWNSSTGQMLRDKLKEQNFQQKV VDGLASGISGVVDLANQAVQNKINSKLDPRPPVEEPPPAVETVSPEGRGEKRPRPDREETLVTQIDEPPSYEEALKQGLP TTRPIAPMATGVLGQHTPVTLDLPPPADTQQKPVLPGPSAVVVTRPSRASLRRAASGPRSMRPVASGNWQSTLNSIVGLG VQSLKRRRCF ; ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1AVP A 1 ? 204 ? P03252 1 ? 204 ? 1 204 2 2 1AVP B 1 ? 11 ? P03274 240 ? 250 ? 205 215 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1AVP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 4 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.85 _exptl_crystal.density_percent_sol 68.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 6.5' # _diffrn.id 1 _diffrn.ambient_temp 300 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'ENRAF-NONIUS FAST' _diffrn_detector.pdbx_collection_date 1995-05-10 _diffrn_detector.details COLLIMATOR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.15 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength 1.15 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1AVP _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.6 _reflns.number_obs 11559 _reflns.number_all ? _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs 0.077 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5. _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 97.6 _reflns_shell.Rmerge_I_obs 0.145 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 16 _reflns_shell.pdbx_redundancy 6. _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1AVP _refine.ls_number_reflns_obs 11559 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 2.6 _refine.ls_percent_reflns_obs 98.8 _refine.ls_R_factor_obs 0.184 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.184 _refine.ls_R_factor_R_free 0.233 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10 _refine.ls_number_reflns_R_free 1086 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'SIRAS SOFTWARE USED : NULL STARTING MODEL FOR MOLECULAR REPLACEMENT: NULL' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1AVP _refine_analyze.Luzzati_coordinate_error_obs 0.1 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs 6.0 _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1715 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 45 _refine_hist.number_atoms_total 1760 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.6 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 23.6 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.169 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.6 _refine_ls_shell.d_res_low 2.64 _refine_ls_shell.number_reflns_R_work 420 _refine_ls_shell.R_factor_R_work 0.216 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.334 _refine_ls_shell.R_factor_R_free_error 0.053 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO,TOPH19.PEP TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL TOPH19.SOL 'X-RAY DIFFRACTION' # _struct.entry_id 1AVP _struct.title 'STRUCTURE OF HUMAN ADENOVIRUS 2 PROTEINASE WITH ITS 11 AMINO ACID COFACTOR' _struct.pdbx_descriptor 'ADENOVIRAL PROTEINASE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1AVP _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'THIOL HYDROLASE, VIRAL PROTEINASE, PEPTIDE COFACTOR, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 8 ? ASP A 14 ? LEU A 8 ASP A 14 1 ? 7 HELX_P HELX_P2 2 GLY A 18 ? TYR A 20 ? GLY A 18 TYR A 20 5 ? 3 HELX_P HELX_P3 3 ASP A 77 ? TYR A 84 ? ASP A 77 TYR A 84 1 ? 8 HELX_P HELX_P4 4 GLU A 89 ? SER A 99 ? GLU A 89 SER A 99 1 ? 11 HELX_P HELX_P5 5 CYS A 122 ? ASN A 135 ? CYS A 122 ASN A 135 1 ? 14 HELX_P HELX_P6 6 MET A 147 ? LEU A 149 ? MET A 147 LEU A 149 5 ? 3 HELX_P HELX_P7 7 ASN A 155 ? MET A 157 ? ASN A 155 MET A 157 5 ? 3 HELX_P HELX_P8 8 GLN A 164 ? HIS A 181 ? GLN A 164 HIS A 181 1 ? 18 HELX_P HELX_P9 9 PRO A 183 ? ALA A 195 ? PRO A 183 ALA A 195 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 104 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 10 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 104 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 214 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.037 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 39 ? ASN A 44 ? ALA A 39 ASN A 44 A 2 TRP A 55 ? ASN A 61 ? TRP A 55 ASN A 61 A 3 THR A 66 ? PHE A 70 ? THR A 66 PHE A 70 A 4 CYS A 104 ? SER A 110 ? CYS A 104 SER A 110 A 5 SER B 4 ? CYS B 10 ? SER B 208 CYS B 214 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 39 ? O ALA A 39 N TRP A 60 ? N TRP A 60 A 2 3 O ALA A 57 ? O ALA A 57 N PHE A 70 ? N PHE A 70 A 3 4 O CYS A 67 ? O CYS A 67 N THR A 106 ? N THR A 106 A 4 5 O ILE A 105 ? O ILE A 105 N ARG B 9 ? N ARG B 213 # _struct_site.id ACT _struct_site.pdbx_evidence_code Unknown _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 ACT 3 HIS A 54 ? HIS A 54 . ? 1_555 ? 2 ACT 3 CYS A 122 ? CYS A 122 . ? 1_555 ? 3 ACT 3 GLU A 71 ? GLU A 71 . ? 1_555 ? # _database_PDB_matrix.entry_id 1AVP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1AVP _atom_sites.fract_transf_matrix[1][1] 0.008749 _atom_sites.fract_transf_matrix[1][2] 0.005051 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010102 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLY 2 2 2 GLY GLY A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 ASP 26 26 26 ASP ASP A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 PRO 35 35 35 PRO PRO A . n A 1 36 HIS 36 36 36 HIS HIS A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 TRP 55 55 55 TRP TRP A . n A 1 56 MET 56 56 56 MET MET A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 TRP 60 60 60 TRP TRP A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 CYS 67 67 67 CYS CYS A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 ASP 77 77 77 ASP ASP A . n A 1 78 GLN 78 78 78 GLN GLN A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 VAL 83 83 83 VAL VAL A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 GLN 85 85 85 GLN GLN A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ARG 93 93 93 ARG ARG A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 CYS 104 104 104 CYS CYS A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 THR 106 106 106 THR THR A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 GLN 112 112 112 GLN GLN A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 ALA 120 120 120 ALA ALA A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 CYS 122 122 122 CYS CYS A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 CYS 126 126 126 CYS CYS A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 MET 128 128 128 MET MET A . n A 1 129 PHE 129 129 129 PHE PHE A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 HIS 131 131 131 HIS HIS A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ASN 135 135 135 ASN ASN A . n A 1 136 TRP 136 136 136 TRP TRP A . n A 1 137 PRO 137 137 137 PRO PRO A . n A 1 138 GLN 138 138 138 GLN GLN A . n A 1 139 THR 139 139 139 THR THR A . n A 1 140 PRO 140 140 140 PRO PRO A . n A 1 141 MET 141 141 141 MET MET A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 HIS 143 143 143 HIS HIS A . n A 1 144 ASN 144 144 144 ASN ASN A . n A 1 145 PRO 145 145 145 PRO PRO A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 MET 147 147 147 MET MET A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 PRO 154 154 154 PRO PRO A . n A 1 155 ASN 155 155 155 ASN ASN A . n A 1 156 SER 156 156 156 SER SER A . n A 1 157 MET 157 157 157 MET MET A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 ASN 159 159 159 ASN ASN A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 PRO 161 161 161 PRO PRO A . n A 1 162 GLN 162 162 162 GLN GLN A . n A 1 163 VAL 163 163 163 VAL VAL A . n A 1 164 GLN 164 164 164 GLN GLN A . n A 1 165 PRO 165 165 165 PRO PRO A . n A 1 166 THR 166 166 166 THR THR A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 ASN 170 170 170 ASN ASN A . n A 1 171 GLN 171 171 171 GLN GLN A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 GLN 173 173 173 GLN GLN A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 TYR 175 175 175 TYR TYR A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 PHE 177 177 177 PHE PHE A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 GLU 179 179 179 GLU GLU A . n A 1 180 ARG 180 180 180 ARG ARG A . n A 1 181 HIS 181 181 181 HIS HIS A . n A 1 182 SER 182 182 182 SER SER A . n A 1 183 PRO 183 183 183 PRO PRO A . n A 1 184 TYR 184 184 184 TYR TYR A . n A 1 185 PHE 185 185 185 PHE PHE A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 HIS 188 188 188 HIS HIS A . n A 1 189 SER 189 189 189 SER SER A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 GLN 191 191 191 GLN GLN A . n A 1 192 ILE 192 192 192 ILE ILE A . n A 1 193 ARG 193 193 193 ARG ARG A . n A 1 194 SER 194 194 194 SER SER A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 SER 197 197 197 SER SER A . n A 1 198 PHE 198 198 198 PHE PHE A . n A 1 199 CYS 199 199 199 CYS CYS A . n A 1 200 HIS 200 200 200 HIS HIS A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 ASN 203 203 203 ASN ASN A . n A 1 204 MET 204 204 204 MET MET A . n B 2 1 GLY 1 205 205 GLY GLY B . n B 2 2 VAL 2 206 206 VAL VAL B . n B 2 3 GLN 3 207 207 GLN GLN B . n B 2 4 SER 4 208 208 SER SER B . n B 2 5 LEU 5 209 209 LEU LEU B . n B 2 6 LYS 6 210 210 LYS LYS B . n B 2 7 ARG 7 211 211 ARG ARG B . n B 2 8 ARG 8 212 212 ARG ARG B . n B 2 9 ARG 9 213 213 ARG ARG B . n B 2 10 CYS 10 214 214 CYS CYS B . n B 2 11 PHE 11 215 215 PHE PHE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 500 500 HOH HOH A . C 3 HOH 2 501 501 HOH HOH A . C 3 HOH 3 502 502 HOH HOH A . C 3 HOH 4 504 504 HOH HOH A . C 3 HOH 5 505 505 HOH HOH A . C 3 HOH 6 506 506 HOH HOH A . C 3 HOH 7 507 507 HOH HOH A . C 3 HOH 8 508 508 HOH HOH A . C 3 HOH 9 509 509 HOH HOH A . C 3 HOH 10 510 510 HOH HOH A . C 3 HOH 11 511 511 HOH HOH A . C 3 HOH 12 512 512 HOH HOH A . C 3 HOH 13 513 513 HOH HOH A . C 3 HOH 14 514 514 HOH HOH A . C 3 HOH 15 515 515 HOH HOH A . C 3 HOH 16 516 516 HOH HOH A . C 3 HOH 17 517 517 HOH HOH A . C 3 HOH 18 518 518 HOH HOH A . C 3 HOH 19 519 519 HOH HOH A . C 3 HOH 20 520 520 HOH HOH A . C 3 HOH 21 521 521 HOH HOH A . C 3 HOH 22 522 522 HOH HOH A . C 3 HOH 23 523 523 HOH HOH A . C 3 HOH 24 524 524 HOH HOH A . C 3 HOH 25 525 525 HOH HOH A . C 3 HOH 26 526 526 HOH HOH A . C 3 HOH 27 527 527 HOH HOH A . C 3 HOH 28 528 528 HOH HOH A . C 3 HOH 29 529 529 HOH HOH A . C 3 HOH 30 530 530 HOH HOH A . C 3 HOH 31 531 531 HOH HOH A . C 3 HOH 32 532 532 HOH HOH A . C 3 HOH 33 534 534 HOH HOH A . C 3 HOH 34 535 535 HOH HOH A . C 3 HOH 35 536 536 HOH HOH A . C 3 HOH 36 537 537 HOH HOH A . C 3 HOH 37 539 539 HOH HOH A . C 3 HOH 38 541 541 HOH HOH A . C 3 HOH 39 542 542 HOH HOH A . C 3 HOH 40 543 543 HOH HOH A . C 3 HOH 41 544 544 HOH HOH A . C 3 HOH 42 546 546 HOH HOH A . C 3 HOH 43 547 547 HOH HOH A . D 3 HOH 1 503 503 HOH HOH B . D 3 HOH 2 533 533 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1630 ? 1 MORE -7 ? 1 'SSA (A^2)' 10000 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-11-19 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2016-05-25 5 'Structure model' 1 4 2018-04-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Structure summary' 4 5 'Structure model' 'Data collection' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 5 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category diffrn_detector # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 5 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_diffrn_detector.detector' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 X-PLOR refinement . ? 3 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ;SHEET SHEET SHEET_ID: (), DETERMINATION METHOD: PROCHECK. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H A PHE 32 ? ? HG A SER 95 ? ? 0.89 2 1 HD21 A ASN 135 ? ? H1 A HOH 528 ? ? 0.92 3 1 HD22 A ASN 44 ? ? H A ALA 46 ? ? 1.05 4 1 HH A TYR 175 ? ? HG1 A THR 196 ? ? 1.07 5 1 CB A CYS 199 ? ? H2 A HOH 527 ? ? 1.16 6 1 CB A CYS 199 ? ? O A HOH 527 ? ? 1.21 7 1 HD21 A ASN 44 ? ? H A VAL 53 ? ? 1.22 8 1 HD1 A HIS 131 ? ? HG1 A THR 146 ? ? 1.23 9 1 HG A SER 76 ? ? H A ARG 79 ? ? 1.25 10 1 HD1 A HIS 143 ? ? H1 A HOH 546 ? ? 1.29 11 1 HH22 B ARG 211 ? ? H1 B HOH 533 ? ? 1.32 12 1 CA A CYS 199 ? ? H1 A HOH 527 ? ? 1.37 13 1 CB A CYS 199 ? ? H1 A HOH 527 ? ? 1.43 14 1 O A GLN 112 ? ? H1 A HOH 504 ? ? 1.57 15 1 CA A CYS 199 ? ? O A HOH 527 ? ? 1.98 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 505 ? ? 1_555 O A HOH 506 ? ? 3_564 0.08 2 1 O A HOH 531 ? ? 1_555 O A HOH 532 ? ? 3_564 0.10 3 1 O A HOH 518 ? ? 1_555 O A HOH 519 ? ? 4_564 0.14 4 1 O A HOH 536 ? ? 1_555 O A HOH 537 ? ? 2_664 0.19 5 1 O A HOH 516 ? ? 1_555 O A HOH 517 ? ? 1_554 0.20 6 1 O A HOH 523 ? ? 1_555 O A HOH 524 ? ? 3_564 0.24 7 1 O A HOH 500 ? ? 1_555 O A HOH 501 ? ? 3_564 0.25 8 1 O A HOH 529 ? ? 1_555 O A HOH 530 ? ? 3_564 0.26 9 1 H1 A HOH 500 ? ? 1_555 H2 A HOH 501 ? ? 3_564 0.34 10 1 H2 A HOH 518 ? ? 1_555 H1 A HOH 519 ? ? 4_564 0.44 11 1 O A HOH 514 ? ? 1_555 O A HOH 515 ? ? 3_564 0.52 12 1 H1 A HOH 536 ? ? 1_555 H2 A HOH 537 ? ? 2_664 0.59 13 1 H2 A HOH 500 ? ? 1_555 H1 A HOH 501 ? ? 3_564 0.72 14 1 O A HOH 529 ? ? 1_555 H2 A HOH 530 ? ? 3_564 0.73 15 1 H1 A HOH 500 ? ? 1_555 O A HOH 501 ? ? 3_564 0.75 16 1 O A HOH 536 ? ? 1_555 H2 A HOH 537 ? ? 2_664 0.77 17 1 O A HOH 516 ? ? 1_555 H2 A HOH 517 ? ? 1_554 0.77 18 1 H1 A HOH 529 ? ? 1_555 O A HOH 530 ? ? 3_564 0.78 19 1 H2 A HOH 516 ? ? 1_555 O A HOH 517 ? ? 1_554 0.79 20 1 H2 A HOH 518 ? ? 1_555 O A HOH 519 ? ? 4_564 0.83 21 1 O A HOH 500 ? ? 1_555 H1 A HOH 501 ? ? 3_564 0.84 22 1 H2 A HOH 529 ? ? 1_555 H1 A HOH 530 ? ? 3_564 0.84 23 1 H2 A HOH 531 ? ? 1_555 O A HOH 532 ? ? 3_564 0.89 24 1 O A HOH 518 ? ? 1_555 H2 A HOH 519 ? ? 4_564 0.90 25 1 O A HOH 531 ? ? 1_555 H1 A HOH 532 ? ? 3_564 0.90 26 1 H2 A HOH 536 ? ? 1_555 H1 A HOH 537 ? ? 2_664 0.92 27 1 O A HOH 514 ? ? 1_555 H1 A HOH 515 ? ? 3_564 0.93 28 1 O A HOH 529 ? ? 1_555 H1 A HOH 530 ? ? 3_564 0.97 29 1 O A HOH 505 ? ? 1_555 H2 A HOH 506 ? ? 3_564 0.97 30 1 H1 A HOH 529 ? ? 1_555 H1 A HOH 530 ? ? 3_564 0.97 31 1 H2 A HOH 536 ? ? 1_555 O A HOH 537 ? ? 2_664 0.97 32 1 H2 A HOH 505 ? ? 1_555 H1 A HOH 506 ? ? 3_564 0.98 33 1 O A HOH 536 ? ? 1_555 H1 A HOH 537 ? ? 2_664 0.98 34 1 H2 A HOH 505 ? ? 1_555 O A HOH 506 ? ? 3_564 0.98 35 1 O A HOH 505 ? ? 1_555 H1 A HOH 506 ? ? 3_564 1.00 36 1 H1 A HOH 516 ? ? 1_555 H2 A HOH 517 ? ? 1_554 1.00 37 1 H1 A HOH 505 ? ? 1_555 O A HOH 506 ? ? 3_564 1.02 38 1 H1 A HOH 531 ? ? 1_555 O A HOH 532 ? ? 3_564 1.02 39 1 H1 A HOH 518 ? ? 1_555 O A HOH 519 ? ? 4_564 1.02 40 1 H2 A HOH 529 ? ? 1_555 H2 A HOH 530 ? ? 3_564 1.05 41 1 O A HOH 531 ? ? 1_555 H2 A HOH 532 ? ? 3_564 1.05 42 1 O A HOH 523 ? ? 1_555 H2 A HOH 524 ? ? 3_564 1.06 43 1 H1 A HOH 523 ? ? 1_555 O A HOH 524 ? ? 3_564 1.06 44 1 H2 A HOH 500 ? ? 1_555 O A HOH 501 ? ? 3_564 1.06 45 1 O A HOH 516 ? ? 1_555 H1 A HOH 517 ? ? 1_554 1.08 46 1 O A HOH 518 ? ? 1_555 H1 A HOH 519 ? ? 4_564 1.09 47 1 H2 A HOH 531 ? ? 1_555 H2 A HOH 532 ? ? 3_564 1.10 48 1 H1 A HOH 516 ? ? 1_555 O A HOH 517 ? ? 1_554 1.11 49 1 H2 A HOH 514 ? ? 1_555 O A HOH 515 ? ? 3_564 1.11 50 1 H1 A HOH 536 ? ? 1_555 O A HOH 537 ? ? 2_664 1.13 51 1 H2 A HOH 529 ? ? 1_555 O A HOH 530 ? ? 3_564 1.14 52 1 H2 A HOH 523 ? ? 1_555 O A HOH 524 ? ? 3_564 1.16 53 1 O A HOH 500 ? ? 1_555 H2 A HOH 501 ? ? 3_564 1.17 54 1 O A HOH 523 ? ? 1_555 H1 A HOH 524 ? ? 3_564 1.17 55 1 H1 A HOH 500 ? ? 1_555 H1 A HOH 501 ? ? 3_564 1.23 56 1 H1 A HOH 523 ? ? 1_555 H2 A HOH 524 ? ? 3_564 1.25 57 1 H2 A HOH 516 ? ? 1_555 H1 A HOH 517 ? ? 1_554 1.27 58 1 H2 A HOH 505 ? ? 1_555 H2 A HOH 506 ? ? 3_564 1.31 59 1 H1 A HOH 514 ? ? 1_555 O A HOH 515 ? ? 3_564 1.32 60 1 H1 A HOH 536 ? ? 1_555 H1 A HOH 537 ? ? 2_664 1.34 61 1 O A HOH 514 ? ? 1_555 H2 A HOH 515 ? ? 3_564 1.42 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 O _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 GLU _pdbx_validate_rmsd_angle.auth_seq_id_1 89 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 GLU _pdbx_validate_rmsd_angle.auth_seq_id_2 89 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 SER _pdbx_validate_rmsd_angle.auth_seq_id_3 90 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 111.37 _pdbx_validate_rmsd_angle.angle_target_value 122.70 _pdbx_validate_rmsd_angle.angle_deviation -11.33 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 4 ? ? 63.23 95.17 2 1 GLN A 6 ? ? -72.85 26.63 3 1 GLU A 7 ? ? -108.79 42.48 4 1 SER A 34 ? ? -160.29 75.87 5 1 GLN A 162 ? ? 178.99 -45.37 6 1 HIS A 188 ? ? -146.13 10.31 7 1 SER A 197 ? ? -48.03 156.73 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #