data_1BN0 # _entry.id 1BN0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1BN0 pdb_00001bn0 10.2210/pdb1bn0/pdb WWPDB D_1000171925 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BN0 _pdbx_database_status.recvd_initial_deposition_date 1998-07-31 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pappalardo, L.' 1 'Kerwood, D.J.' 2 'Pelczer, I.' 3 'Borer, P.N.' 4 # _citation.id primary _citation.title 'Three-dimensional folding of an RNA hairpin required for packaging HIV-1.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 282 _citation.page_first 801 _citation.page_last 818 _citation.year 1998 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9743628 _citation.pdbx_database_id_DOI 10.1006/jmbi.1998.2046 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pappalardo, L.' 1 ? primary 'Kerwood, D.J.' 2 ? primary 'Pelczer, I.' 3 ? primary 'Borer, P.N.' 4 ? # _cell.entry_id 1BN0 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BN0 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'SL3 RNA HAIRPIN' _entity.formula_weight 6477.919 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGACUAGCGGAGGCUAGUCC _entity_poly.pdbx_seq_one_letter_code_can GGACUAGCGGAGGCUAGUCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 C n 1 5 U n 1 6 A n 1 7 G n 1 8 C n 1 9 G n 1 10 G n 1 11 A n 1 12 G n 1 13 G n 1 14 C n 1 15 U n 1 16 A n 1 17 G n 1 18 U n 1 19 C n 1 20 C n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1BN0 _struct_ref.pdbx_db_accession 1BN0 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1BN0 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 20 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1BN0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 20 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 NOESY 1 2 1 DQF-COSY 1 3 1 H-PCOSY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.pressure NORMAL _pdbx_nmr_exptl_sample_conditions.pH 7 _pdbx_nmr_exptl_sample_conditions.ionic_strength 30mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents WATER # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DRX500 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 500 # _pdbx_nmr_refine.entry_id 1BN0 _pdbx_nmr_refine.method 'DISTANCE GEOMETRY, RESTRAINED MOLECULAR DYNAMICS' _pdbx_nmr_refine.details 'AVERAGE SIXTH ROOT RESIDUAL NMR INDEX = 0.07, AVERAGE RESTRAINT VIOLATION = 0.06 ANGSTROM.' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1BN0 _pdbx_nmr_details.text ;THE STRUCTURES WERE DETERMINED FROM 2D NOESY EXPERIMENTS PERFORMED BOTH IN H2O AND D2O. THE DISTANCE RESTRAINTS DETERMINED FROM MARDIGRAS WERE BASED ON INTENSITIES FROM A NOESY WITH A MIXING TIME OF 300MS. DQF-COSY AND H-P COSY WERE USED TO ASCERTAIN INFORMATION ABOUT THE TORSION ANGLES. ; # _pdbx_nmr_ensemble.entry_id 1BN0 _pdbx_nmr_ensemble.conformers_calculated_total_number 500 _pdbx_nmr_ensemble.conformers_submitted_total_number 11 _pdbx_nmr_ensemble.conformer_selection_criteria 'LEAST RESTRAINT VIOLATION' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement Amber ? 'PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM, FERGUSON,SEIBEL,SINGH,WEINER,KOLLMAN' 1 'structure solution' MARDIGRAS ? ? 2 'structure solution' DYANA ? ? 3 'structure solution' Amber ? ? 4 # _exptl.entry_id 1BN0 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1BN0 _struct.title 'SL3 HAIRPIN FROM THE PACKAGING SIGNAL OF HIV-1, NMR, 11 STRUCTURES' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BN0 _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'HIV-1, PACKAGING, RNA, TETRALOOP, RIBONUCLEIC ACID' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 20 N3 ? ? A G 1 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 20 O2 ? ? A G 1 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 20 N4 ? ? A G 1 A C 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 19 N3 ? ? A G 2 A C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 19 O2 ? ? A G 2 A C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 19 N4 ? ? A G 2 A C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 18 N3 ? ? A A 3 A U 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 18 O4 ? ? A A 3 A U 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 17 N1 ? ? A C 4 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 17 O6 ? ? A C 4 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 17 N2 ? ? A C 4 A G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 16 N1 ? ? A U 5 A A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 16 N6 ? ? A U 5 A A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 15 N3 ? ? A A 6 A U 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 15 O4 ? ? A A 6 A U 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 14 N3 ? ? A G 7 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 14 O2 ? ? A G 7 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 14 N4 ? ? A G 7 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 13 N1 ? ? A C 8 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 13 O6 ? ? A C 8 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 13 N2 ? ? A C 8 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1BN0 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1BN0 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 A 3 3 3 A A A . n A 1 4 C 4 4 4 C C A . n A 1 5 U 5 5 5 U U A . n A 1 6 A 6 6 6 A A A . n A 1 7 G 7 7 7 G G A . n A 1 8 C 8 8 8 C C A . n A 1 9 G 9 9 9 G G A . n A 1 10 G 10 10 10 G G A . n A 1 11 A 11 11 11 A A A . n A 1 12 G 12 12 12 G G A . n A 1 13 G 13 13 13 G G A . n A 1 14 C 14 14 14 C C A . n A 1 15 U 15 15 15 U U A . n A 1 16 A 16 16 16 A A A . n A 1 17 G 17 17 17 G G A . n A 1 18 U 18 18 18 U U A . n A 1 19 C 19 19 19 C C A . n A 1 20 C 20 20 20 C C A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-04-27 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_nmr_software 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_pdbx_nmr_software.name' # _software.name AMBER _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A G 1 ? ? "C2'" A G 1 ? ? "C1'" A G 1 ? ? 107.39 101.50 5.89 0.80 N 2 1 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 112.92 108.50 4.42 0.70 N 3 1 N7 A A 3 ? ? C8 A A 3 ? ? N9 A A 3 ? ? 116.87 113.80 3.07 0.50 N 4 1 "O4'" A G 7 ? ? "C1'" A G 7 ? ? N9 A G 7 ? ? 112.82 108.50 4.32 0.70 N 5 1 "C3'" A G 7 ? ? "O3'" A G 7 ? ? P A C 8 ? ? 128.06 119.70 8.36 1.20 Y 6 1 N9 A A 11 ? ? "C1'" A A 11 ? ? "C2'" A A 11 ? ? 123.17 114.00 9.17 1.30 N 7 1 N3 A A 11 ? ? C4 A A 11 ? ? N9 A A 11 ? ? 122.13 127.40 -5.27 0.80 N 8 1 C6 A A 11 ? ? C5 A A 11 ? ? N7 A A 11 ? ? 136.75 132.30 4.45 0.70 N 9 1 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 124.54 108.50 16.04 0.70 N 10 1 N9 A G 13 ? ? C4 A G 13 ? ? C5 A G 13 ? ? 107.88 105.40 2.48 0.40 N 11 1 C8 A G 13 ? ? N9 A G 13 ? ? "C1'" A G 13 ? ? 135.61 127.00 8.61 1.30 N 12 1 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.77 108.50 5.27 0.70 N 13 1 "O4'" A U 15 ? ? "C1'" A U 15 ? ? N1 A U 15 ? ? 113.13 108.50 4.63 0.70 N 14 1 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 115.01 108.50 6.51 0.70 N 15 1 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 114.76 108.50 6.26 0.70 N 16 1 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 118.52 109.80 8.72 0.90 N 17 2 "C3'" A G 1 ? ? "C2'" A G 1 ? ? "C1'" A G 1 ? ? 107.12 101.50 5.62 0.80 N 18 2 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 112.99 108.50 4.49 0.70 N 19 2 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 112.72 108.50 4.22 0.70 N 20 2 "C3'" A G 7 ? ? "O3'" A G 7 ? ? P A C 8 ? ? 127.32 119.70 7.62 1.20 Y 21 2 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 112.71 108.50 4.21 0.70 N 22 2 "C3'" A A 11 ? ? "O3'" A A 11 ? ? P A G 12 ? ? 127.32 119.70 7.62 1.20 Y 23 2 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 118.13 108.50 9.63 0.70 N 24 2 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.53 108.50 5.03 0.70 N 25 2 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 114.06 108.50 5.56 0.70 N 26 2 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 113.97 108.50 5.47 0.70 N 27 2 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 119.21 109.80 9.41 0.90 N 28 2 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.21 108.50 4.71 0.70 N 29 3 "C3'" A G 1 ? ? "C2'" A G 1 ? ? "C1'" A G 1 ? ? 107.93 101.50 6.43 0.80 N 30 3 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 114.15 108.50 5.65 0.70 N 31 3 "O4'" A G 7 ? ? "C1'" A G 7 ? ? N9 A G 7 ? ? 113.22 108.50 4.72 0.70 N 32 3 "C3'" A G 7 ? ? "O3'" A G 7 ? ? P A C 8 ? ? 127.54 119.70 7.84 1.20 Y 33 3 "O4'" A G 9 ? ? "C1'" A G 9 ? ? N9 A G 9 ? ? 113.09 108.50 4.59 0.70 N 34 3 "C4'" A A 11 ? ? "C3'" A A 11 ? ? "C2'" A A 11 ? ? 110.21 102.60 7.61 1.00 N 35 3 N9 A A 11 ? ? "C1'" A A 11 ? ? "C2'" A A 11 ? ? 123.94 114.00 9.94 1.30 N 36 3 N3 A A 11 ? ? C4 A A 11 ? ? N9 A A 11 ? ? 122.30 127.40 -5.10 0.80 N 37 3 C4 A A 11 ? ? N9 A A 11 ? ? "C1'" A A 11 ? ? 115.26 126.30 -11.04 1.80 N 38 3 "C3'" A A 11 ? ? "O3'" A A 11 ? ? P A G 12 ? ? 127.63 119.70 7.93 1.20 Y 39 3 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 119.45 108.50 10.95 0.70 N 40 3 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.23 108.50 4.73 0.70 N 41 3 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 113.08 108.50 4.58 0.70 N 42 3 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 114.78 108.50 6.28 0.70 N 43 3 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 118.73 109.80 8.93 0.90 N 44 4 "C3'" A G 1 ? ? "C2'" A G 1 ? ? "C1'" A G 1 ? ? 107.61 101.50 6.11 0.80 N 45 4 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 113.87 108.50 5.37 0.70 N 46 4 "O4'" A G 7 ? ? "C1'" A G 7 ? ? N9 A G 7 ? ? 113.37 108.50 4.87 0.70 N 47 4 "C3'" A G 7 ? ? "O3'" A G 7 ? ? P A C 8 ? ? 128.14 119.70 8.44 1.20 Y 48 4 "O4'" A G 9 ? ? "C1'" A G 9 ? ? N9 A G 9 ? ? 113.60 108.50 5.10 0.70 N 49 4 "C3'" A A 11 ? ? "C2'" A A 11 ? ? "C1'" A A 11 ? ? 96.69 101.30 -4.61 0.70 N 50 4 "O4'" A A 11 ? ? "C1'" A A 11 ? ? N9 A A 11 ? ? 114.35 108.50 5.85 0.70 N 51 4 N3 A A 11 ? ? C4 A A 11 ? ? N9 A A 11 ? ? 121.89 127.40 -5.51 0.80 N 52 4 "C3'" A A 11 ? ? "O3'" A A 11 ? ? P A G 12 ? ? 129.78 119.70 10.08 1.20 Y 53 4 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 118.64 108.50 10.14 0.70 N 54 4 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 114.06 108.50 5.56 0.70 N 55 4 "O4'" A U 15 ? ? "C1'" A U 15 ? ? N1 A U 15 ? ? 113.20 108.50 4.70 0.70 N 56 4 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 114.39 108.50 5.89 0.70 N 57 4 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 115.04 108.50 6.54 0.70 N 58 4 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 118.69 109.80 8.89 0.90 N 59 4 N1 A C 19 ? ? "C1'" A C 19 ? ? "C2'" A C 19 ? ? 105.33 112.00 -6.67 1.10 N 60 4 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.59 108.50 5.09 0.70 N 61 5 "C3'" A G 1 ? ? "C2'" A G 1 ? ? "C1'" A G 1 ? ? 107.10 101.50 5.60 0.80 N 62 5 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 112.96 108.50 4.46 0.70 N 63 5 "C3'" A G 7 ? ? "O3'" A G 7 ? ? P A C 8 ? ? 127.02 119.70 7.32 1.20 Y 64 5 "O4'" A G 9 ? ? "C1'" A G 9 ? ? N9 A G 9 ? ? 114.67 108.50 6.17 0.70 N 65 5 "O4'" A G 10 ? ? "C1'" A G 10 ? ? N9 A G 10 ? ? 113.39 108.50 4.89 0.70 N 66 5 "C5'" A A 11 ? ? "C4'" A A 11 ? ? "O4'" A A 11 ? ? 120.79 109.80 10.99 0.90 N 67 5 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 116.67 108.50 8.17 0.70 N 68 5 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 115.53 108.50 7.03 0.70 N 69 5 "C1'" A A 16 ? ? "O4'" A A 16 ? ? "C4'" A A 16 ? ? 105.23 109.70 -4.47 0.70 N 70 5 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 114.31 108.50 5.81 0.70 N 71 5 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 114.59 108.50 6.09 0.70 N 72 5 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 117.04 109.80 7.24 0.90 N 73 5 "C3'" A C 19 ? ? "C2'" A C 19 ? ? "C1'" A C 19 ? ? 106.55 101.50 5.05 0.80 N 74 5 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.30 108.50 4.80 0.70 N 75 6 "C3'" A G 1 ? ? "C2'" A G 1 ? ? "C1'" A G 1 ? ? 107.32 101.50 5.82 0.80 N 76 6 "O4'" A G 7 ? ? "C1'" A G 7 ? ? N9 A G 7 ? ? 114.48 108.50 5.98 0.70 N 77 6 "O4'" A G 10 ? ? "C1'" A G 10 ? ? N9 A G 10 ? ? 113.02 108.50 4.52 0.70 N 78 6 "C3'" A A 11 ? ? "O3'" A A 11 ? ? P A G 12 ? ? 126.99 119.70 7.29 1.20 Y 79 6 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 117.43 108.50 8.93 0.70 N 80 6 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.12 108.50 4.62 0.70 N 81 6 "C1'" A A 16 ? ? "O4'" A A 16 ? ? "C4'" A A 16 ? ? 105.38 109.70 -4.32 0.70 N 82 6 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 114.95 108.50 6.45 0.70 N 83 6 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 114.55 108.50 6.05 0.70 N 84 6 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 117.68 109.80 7.88 0.90 N 85 7 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 112.93 108.50 4.43 0.70 N 86 7 "C3'" A A 11 ? ? "O3'" A A 11 ? ? P A G 12 ? ? 127.54 119.70 7.84 1.20 Y 87 7 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 120.21 108.50 11.71 0.70 N 88 7 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.57 108.50 5.07 0.70 N 89 7 "C1'" A A 16 ? ? "O4'" A A 16 ? ? "C4'" A A 16 ? ? 105.18 109.70 -4.52 0.70 N 90 7 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 115.95 108.50 7.45 0.70 N 91 7 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 115.31 108.50 6.81 0.70 N 92 7 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 117.82 109.80 8.02 0.90 N 93 7 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 112.83 108.50 4.33 0.70 N 94 8 "C3'" A G 1 ? ? "C2'" A G 1 ? ? "C1'" A G 1 ? ? 107.45 101.50 5.95 0.80 N 95 8 "O4'" A G 7 ? ? "C1'" A G 7 ? ? N9 A G 7 ? ? 113.59 108.50 5.09 0.70 N 96 8 "C3'" A G 7 ? ? "O3'" A G 7 ? ? P A C 8 ? ? 127.15 119.70 7.45 1.20 Y 97 8 "O4'" A A 11 ? ? "C1'" A A 11 ? ? N9 A A 11 ? ? 115.32 108.50 6.82 0.70 N 98 8 N9 A A 11 ? ? C4 A A 11 ? ? C5 A A 11 ? ? 102.85 105.80 -2.95 0.40 N 99 8 N3 A A 11 ? ? C4 A A 11 ? ? N9 A A 11 ? ? 120.91 127.40 -6.49 0.80 N 100 8 "C3'" A G 12 ? ? "O3'" A G 12 ? ? P A G 13 ? ? 127.25 119.70 7.55 1.20 Y 101 8 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 120.22 108.50 11.72 0.70 N 102 8 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.77 108.50 5.27 0.70 N 103 8 "C1'" A A 16 ? ? "O4'" A A 16 ? ? "C4'" A A 16 ? ? 105.07 109.70 -4.63 0.70 N 104 8 "C3'" A A 16 ? ? "C2'" A A 16 ? ? "C1'" A A 16 ? ? 106.68 101.50 5.18 0.80 N 105 8 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 117.33 108.50 8.83 0.70 N 106 8 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 117.87 108.50 9.37 0.70 N 107 8 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 121.74 109.80 11.94 0.90 N 108 8 "C3'" A U 18 ? ? "C2'" A U 18 ? ? "C1'" A U 18 ? ? 106.63 101.50 5.13 0.80 N 109 8 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.65 108.50 5.15 0.70 N 110 9 "C3'" A G 1 ? ? "C2'" A G 1 ? ? "C1'" A G 1 ? ? 107.76 101.50 6.26 0.80 N 111 9 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 112.76 108.50 4.26 0.70 N 112 9 "C3'" A A 11 ? ? "C2'" A A 11 ? ? "C1'" A A 11 ? ? 94.14 101.30 -7.16 0.70 N 113 9 "O4'" A A 11 ? ? "C1'" A A 11 ? ? N9 A A 11 ? ? 118.94 108.50 10.44 0.70 N 114 9 N3 A A 11 ? ? C4 A A 11 ? ? N9 A A 11 ? ? 121.96 127.40 -5.44 0.80 N 115 9 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 119.33 108.50 10.83 0.70 N 116 9 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.07 108.50 4.57 0.70 N 117 9 "C1'" A A 16 ? ? "O4'" A A 16 ? ? "C4'" A A 16 ? ? 104.75 109.70 -4.95 0.70 N 118 9 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 116.28 108.50 7.78 0.70 N 119 9 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 116.85 108.50 8.35 0.70 N 120 9 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 117.93 109.80 8.13 0.90 N 121 9 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 112.92 108.50 4.42 0.70 N 122 10 "C3'" A G 1 ? ? "C2'" A G 1 ? ? "C1'" A G 1 ? ? 107.38 101.50 5.88 0.80 N 123 10 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 113.31 108.50 4.81 0.70 N 124 10 C8 A G 7 ? ? N9 A G 7 ? ? C4 A G 7 ? ? 103.83 106.40 -2.57 0.40 N 125 10 "O4'" A C 8 ? ? "C1'" A C 8 ? ? N1 A C 8 ? ? 113.03 108.50 4.53 0.70 N 126 10 "C3'" A G 9 ? ? "C2'" A G 9 ? ? "C1'" A G 9 ? ? 106.42 101.50 4.92 0.80 N 127 10 "O4'" A G 9 ? ? "C1'" A G 9 ? ? N9 A G 9 ? ? 115.70 108.50 7.20 0.70 N 128 10 N3 A A 11 ? ? C4 A A 11 ? ? N9 A A 11 ? ? 121.15 127.40 -6.25 0.80 N 129 10 "C3'" A G 12 ? ? "O3'" A G 12 ? ? P A G 13 ? ? 127.50 119.70 7.80 1.20 Y 130 10 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 119.24 108.50 10.74 0.70 N 131 10 N9 A G 13 ? ? C4 A G 13 ? ? C5 A G 13 ? ? 107.88 105.40 2.48 0.40 N 132 10 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 114.24 108.50 5.74 0.70 N 133 10 "C1'" A A 16 ? ? "O4'" A A 16 ? ? "C4'" A A 16 ? ? 104.33 109.70 -5.37 0.70 N 134 10 "C4'" A A 16 ? ? "C3'" A A 16 ? ? "C2'" A A 16 ? ? 96.56 102.60 -6.04 1.00 N 135 10 "C3'" A A 16 ? ? "C2'" A A 16 ? ? "C1'" A A 16 ? ? 106.37 101.50 4.87 0.80 N 136 10 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 117.60 108.50 9.10 0.70 N 137 10 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 117.53 108.50 9.03 0.70 N 138 10 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 119.51 109.80 9.71 0.90 N 139 11 "C3'" A G 1 ? ? "C2'" A G 1 ? ? "C1'" A G 1 ? ? 106.91 101.50 5.41 0.80 N 140 11 "O4'" A G 2 ? ? "C1'" A G 2 ? ? N9 A G 2 ? ? 114.26 108.50 5.76 0.70 N 141 11 "C5'" A C 4 ? ? "C4'" A C 4 ? ? "O4'" A C 4 ? ? 115.38 109.80 5.58 0.90 N 142 11 "O4'" A U 5 ? ? "C1'" A U 5 ? ? N1 A U 5 ? ? 113.06 108.50 4.56 0.70 N 143 11 "C3'" A G 7 ? ? "O3'" A G 7 ? ? P A C 8 ? ? 127.12 119.70 7.42 1.20 Y 144 11 "O4'" A G 9 ? ? "C1'" A G 9 ? ? N9 A G 9 ? ? 114.09 108.50 5.59 0.70 N 145 11 N3 A A 11 ? ? C4 A A 11 ? ? N9 A A 11 ? ? 121.08 127.40 -6.32 0.80 N 146 11 "O4'" A G 13 ? ? "C1'" A G 13 ? ? N9 A G 13 ? ? 120.25 108.50 11.75 0.70 N 147 11 N9 A G 13 ? ? C4 A G 13 ? ? C5 A G 13 ? ? 107.90 105.40 2.50 0.40 N 148 11 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.89 108.50 5.39 0.70 N 149 11 "O4'" A U 15 ? ? "C1'" A U 15 ? ? N1 A U 15 ? ? 113.18 108.50 4.68 0.70 N 150 11 "O4'" A A 16 ? ? "C1'" A A 16 ? ? N9 A A 16 ? ? 113.73 108.50 5.23 0.70 N 151 11 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 114.98 108.50 6.48 0.70 N 152 11 "C5'" A U 18 ? ? "C4'" A U 18 ? ? "O4'" A U 18 ? ? 119.17 109.80 9.37 0.90 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 A A 3 ? ? 0.063 'SIDE CHAIN' 2 1 A A 6 ? ? 0.075 'SIDE CHAIN' 3 1 G A 7 ? ? 0.062 'SIDE CHAIN' 4 1 G A 9 ? ? 0.060 'SIDE CHAIN' 5 1 A A 11 ? ? 0.224 'SIDE CHAIN' 6 1 G A 13 ? ? 0.105 'SIDE CHAIN' 7 1 U A 15 ? ? 0.098 'SIDE CHAIN' 8 1 C A 19 ? ? 0.081 'SIDE CHAIN' 9 1 C A 20 ? ? 0.060 'SIDE CHAIN' 10 2 G A 1 ? ? 0.068 'SIDE CHAIN' 11 2 C A 4 ? ? 0.073 'SIDE CHAIN' 12 2 A A 6 ? ? 0.066 'SIDE CHAIN' 13 2 G A 10 ? ? 0.061 'SIDE CHAIN' 14 2 G A 12 ? ? 0.065 'SIDE CHAIN' 15 2 U A 15 ? ? 0.117 'SIDE CHAIN' 16 2 G A 17 ? ? 0.086 'SIDE CHAIN' 17 2 C A 19 ? ? 0.099 'SIDE CHAIN' 18 3 A A 6 ? ? 0.101 'SIDE CHAIN' 19 3 G A 7 ? ? 0.098 'SIDE CHAIN' 20 3 G A 9 ? ? 0.066 'SIDE CHAIN' 21 3 A A 11 ? ? 0.299 'SIDE CHAIN' 22 3 G A 13 ? ? 0.112 'SIDE CHAIN' 23 3 C A 14 ? ? 0.091 'SIDE CHAIN' 24 3 U A 15 ? ? 0.139 'SIDE CHAIN' 25 3 A A 16 ? ? 0.081 'SIDE CHAIN' 26 3 C A 19 ? ? 0.068 'SIDE CHAIN' 27 3 C A 20 ? ? 0.059 'SIDE CHAIN' 28 4 G A 2 ? ? 0.115 'SIDE CHAIN' 29 4 A A 3 ? ? 0.063 'SIDE CHAIN' 30 4 A A 6 ? ? 0.071 'SIDE CHAIN' 31 4 G A 9 ? ? 0.130 'SIDE CHAIN' 32 4 A A 11 ? ? 0.393 'SIDE CHAIN' 33 4 G A 13 ? ? 0.125 'SIDE CHAIN' 34 4 U A 15 ? ? 0.141 'SIDE CHAIN' 35 4 U A 18 ? ? 0.083 'SIDE CHAIN' 36 4 C A 19 ? ? 0.131 'SIDE CHAIN' 37 5 G A 1 ? ? 0.056 'SIDE CHAIN' 38 5 A A 6 ? ? 0.081 'SIDE CHAIN' 39 5 G A 7 ? ? 0.088 'SIDE CHAIN' 40 5 G A 9 ? ? 0.064 'SIDE CHAIN' 41 5 G A 12 ? ? 0.115 'SIDE CHAIN' 42 5 G A 13 ? ? 0.080 'SIDE CHAIN' 43 5 C A 14 ? ? 0.077 'SIDE CHAIN' 44 5 A A 16 ? ? 0.116 'SIDE CHAIN' 45 5 G A 17 ? ? 0.068 'SIDE CHAIN' 46 5 C A 19 ? ? 0.089 'SIDE CHAIN' 47 5 C A 20 ? ? 0.143 'SIDE CHAIN' 48 6 A A 6 ? ? 0.055 'SIDE CHAIN' 49 6 A A 11 ? ? 0.211 'SIDE CHAIN' 50 6 G A 13 ? ? 0.108 'SIDE CHAIN' 51 6 C A 14 ? ? 0.150 'SIDE CHAIN' 52 6 C A 19 ? ? 0.073 'SIDE CHAIN' 53 6 C A 20 ? ? 0.135 'SIDE CHAIN' 54 7 A A 6 ? ? 0.084 'SIDE CHAIN' 55 7 G A 7 ? ? 0.121 'SIDE CHAIN' 56 7 C A 8 ? ? 0.057 'SIDE CHAIN' 57 7 A A 11 ? ? 0.140 'SIDE CHAIN' 58 7 G A 13 ? ? 0.149 'SIDE CHAIN' 59 7 C A 14 ? ? 0.082 'SIDE CHAIN' 60 7 U A 15 ? ? 0.092 'SIDE CHAIN' 61 7 A A 16 ? ? 0.070 'SIDE CHAIN' 62 7 C A 19 ? ? 0.067 'SIDE CHAIN' 63 7 C A 20 ? ? 0.069 'SIDE CHAIN' 64 8 G A 7 ? ? 0.056 'SIDE CHAIN' 65 8 A A 11 ? ? 0.438 'SIDE CHAIN' 66 8 U A 15 ? ? 0.088 'SIDE CHAIN' 67 8 G A 17 ? ? 0.071 'SIDE CHAIN' 68 8 C A 19 ? ? 0.092 'SIDE CHAIN' 69 8 C A 20 ? ? 0.112 'SIDE CHAIN' 70 9 A A 6 ? ? 0.073 'SIDE CHAIN' 71 9 G A 7 ? ? 0.106 'SIDE CHAIN' 72 9 G A 10 ? ? 0.055 'SIDE CHAIN' 73 9 A A 11 ? ? 0.368 'SIDE CHAIN' 74 9 G A 13 ? ? 0.099 'SIDE CHAIN' 75 9 A A 16 ? ? 0.088 'SIDE CHAIN' 76 10 G A 1 ? ? 0.066 'SIDE CHAIN' 77 10 U A 5 ? ? 0.064 'SIDE CHAIN' 78 10 G A 7 ? ? 0.095 'SIDE CHAIN' 79 10 G A 9 ? ? 0.113 'SIDE CHAIN' 80 10 A A 11 ? ? 0.415 'SIDE CHAIN' 81 10 G A 13 ? ? 0.127 'SIDE CHAIN' 82 10 C A 14 ? ? 0.105 'SIDE CHAIN' 83 10 U A 15 ? ? 0.094 'SIDE CHAIN' 84 11 G A 2 ? ? 0.078 'SIDE CHAIN' 85 11 A A 6 ? ? 0.065 'SIDE CHAIN' 86 11 G A 7 ? ? 0.075 'SIDE CHAIN' 87 11 A A 11 ? ? 0.332 'SIDE CHAIN' 88 11 G A 13 ? ? 0.086 'SIDE CHAIN' 89 11 U A 15 ? ? 0.088 'SIDE CHAIN' 90 11 A A 16 ? ? 0.073 'SIDE CHAIN' 91 11 C A 19 ? ? 0.057 'SIDE CHAIN' 92 11 C A 20 ? ? 0.118 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1BN0 'double helix' 1BN0 'a-form double helix' 1BN0 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 20 1_555 -0.563 -0.100 0.573 12.547 32.723 6.732 1 A_G1:C20_A A 1 ? A 20 ? 19 1 1 A G 2 1_555 A C 19 1_555 -0.805 -0.119 0.246 13.791 -11.864 1.352 2 A_G2:C19_A A 2 ? A 19 ? 19 1 1 A A 3 1_555 A U 18 1_555 0.390 0.129 0.337 27.333 -15.049 -17.525 3 A_A3:U18_A A 3 ? A 18 ? 20 1 1 A C 4 1_555 A G 17 1_555 -0.072 -0.130 0.211 7.006 -42.004 1.492 4 A_C4:G17_A A 4 ? A 17 ? 19 1 1 A U 5 1_555 A A 16 1_555 0.309 -0.170 0.792 -11.133 -30.865 -22.537 5 A_U5:A16_A A 5 ? A 16 ? 20 1 1 A A 6 1_555 A U 15 1_555 -0.179 -0.129 1.036 10.226 -11.573 -15.561 6 A_A6:U15_A A 6 ? A 15 ? 20 1 1 A G 7 1_555 A C 14 1_555 0.311 -0.157 1.295 22.836 -19.457 -8.575 7 A_G7:C14_A A 7 ? A 14 ? 19 1 1 A C 8 1_555 A G 13 1_555 -0.326 -0.020 0.518 20.732 6.134 3.540 8 A_C8:G13_A A 8 ? A 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 20 1_555 A G 2 1_555 A C 19 1_555 -1.085 -1.553 4.659 0.069 1.715 23.407 -4.633 2.701 4.532 4.219 -0.169 23.468 1 AA_G1G2:C19C20_AA A 1 ? A 20 ? A 2 ? A 19 ? 1 A G 2 1_555 A C 19 1_555 A A 3 1_555 A U 18 1_555 -1.443 -0.722 3.122 0.369 2.424 37.972 -1.398 2.258 3.058 3.721 -0.566 38.048 2 AA_G2A3:U18C19_AA A 2 ? A 19 ? A 3 ? A 18 ? 1 A A 3 1_555 A U 18 1_555 A C 4 1_555 A G 17 1_555 1.866 -1.568 3.547 10.254 4.430 39.955 -2.752 -1.399 3.709 6.335 -14.662 41.426 3 AA_A3C4:G17U18_AA A 3 ? A 18 ? A 4 ? A 17 ? 1 A C 4 1_555 A G 17 1_555 A U 5 1_555 A A 16 1_555 -1.007 -0.464 4.194 -1.710 5.703 37.670 -1.634 1.264 4.123 8.765 2.629 38.121 4 AA_C4U5:A16G17_AA A 4 ? A 17 ? A 5 ? A 16 ? 1 A U 5 1_555 A A 16 1_555 A A 6 1_555 A U 15 1_555 -0.279 -1.678 2.519 1.967 6.520 30.253 -4.038 0.794 2.098 12.297 -3.709 30.993 5 AA_U5A6:U15A16_AA A 5 ? A 16 ? A 6 ? A 15 ? 1 A A 6 1_555 A U 15 1_555 A G 7 1_555 A C 14 1_555 0.318 -0.681 3.117 -3.001 -3.959 32.793 -0.554 -1.043 3.135 -6.962 5.278 33.157 6 AA_A6G7:C14U15_AA A 6 ? A 15 ? A 7 ? A 14 ? 1 A G 7 1_555 A C 14 1_555 A C 8 1_555 A G 13 1_555 1.164 -0.668 3.717 1.304 -7.135 38.508 -0.004 -1.555 3.812 -10.702 -1.956 39.159 7 AA_G7C8:G13C14_AA A 7 ? A 14 ? A 8 ? A 13 ? #