HEADER GROWTH FACTOR 29-AUG-95 1BTG TITLE CRYSTAL STRUCTURE OF BETA NERVE GROWTH FACTOR AT 2.5 A RESOLUTION IN TITLE 2 C2 SPACE GROUP WITH ZN IONS BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA NERVE GROWTH FACTOR; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: BNGF; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: ZN IONS BOUND SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 ORGAN: SALIVARY GLANDS KEYWDS NERVE, GROWTH FACTOR EXPDTA X-RAY DIFFRACTION AUTHOR D.R.HOLLAND,B.W.MATTHEWS REVDAT 4 22-JUL-20 1BTG 1 REMARK REVDAT 3 13-JUL-11 1BTG 1 VERSN REVDAT 2 24-FEB-09 1BTG 1 VERSN REVDAT 1 08-MAR-96 1BTG 0 JRNL AUTH D.R.HOLLAND,L.S.COUSENS,W.MENG,B.W.MATTHEWS JRNL TITL NERVE GROWTH FACTOR IN DIFFERENT CRYSTAL FORMS DISPLAYS JRNL TITL 2 STRUCTURAL FLEXIBILITY AND REVEALS ZINC BINDING SITES. JRNL REF J.MOL.BIOL. V. 239 385 1994 JRNL REFN ISSN 0022-2836 JRNL PMID 8201620 JRNL DOI 10.1006/JMBI.1994.1380 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 44269 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2508 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 54 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.014 ; 0.020 ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.400 ; 2.500 ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 ALTHOUGH THE N- AND C-TERMINI OF THE A, B, AND C REMARK 3 MOLECULES ARE CHARACTERIZED BY HIGH TEMPERATURE FACTORS, REMARK 3 THEY ARE SEEN IN OMIT MAPS. REMARK 4 REMARK 4 1BTG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000172069. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : JAN-93 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING-ANODE X-RAY TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : XUONG-HAMLIN REMARK 200 REMARK 200 DETECTOR TYPE : AREA DETECTOR REMARK 200 DETECTOR MANUFACTURER : AREA DETECTOR REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XENGEN (HOWARD, NIELSEN, XUONG) REMARK 200 DATA SCALING SOFTWARE : XENGEN (HOWARD, NIELSEN, XUONG) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 54.90000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.95000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 54.90000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 46.95000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 141.96541 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -49.34163 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -103.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 22.73459 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 -46.95000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 49.34163 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 9 REMARK 465 ARG A 118 REMARK 465 MET B 9 REMARK 465 MET C 9 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 74 CG CD CE NZ REMARK 470 GLU B 41 CG CD OE1 OE2 REMARK 470 ILE B 44 CG1 CG2 CD1 REMARK 470 ASN B 46 CG OD1 ND2 REMARK 470 SER B 47 OG REMARK 470 ARG B 59 NH1 NH2 REMARK 470 GLU B 65 CG CD OE1 OE2 REMARK 470 LYS B 74 CG CD CE NZ REMARK 470 LYS B 95 CG CD CE NZ REMARK 470 LYS C 32 CG CD CE NZ REMARK 470 LYS C 34 CG CD CE NZ REMARK 470 ASN C 43 CG OD1 ND2 REMARK 470 ILE C 44 CG1 CG2 CD1 REMARK 470 SER C 47 OG REMARK 470 TYR C 52 OH REMARK 470 LYS C 74 CD CE NZ REMARK 470 LYS C 95 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 922 O HOH A 922 2654 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 11 CD GLU A 11 OE2 0.077 REMARK 500 GLU A 35 CD GLU A 35 OE1 0.068 REMARK 500 GLU A 41 CD GLU A 41 OE1 0.074 REMARK 500 GLU B 11 CD GLU B 11 OE2 0.071 REMARK 500 ARG B 59 NE ARG B 59 CZ 0.148 REMARK 500 GLU B 94 CD GLU B 94 OE1 0.095 REMARK 500 GLU C 11 CD GLU C 11 OE2 0.083 REMARK 500 GLU C 35 CD GLU C 35 OE1 0.068 REMARK 500 GLU C 41 CD GLU C 41 OE1 0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 24 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 24 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP A 30 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 72 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 59 CD - NE - CZ ANGL. DEV. = -9.8 DEGREES REMARK 500 ARG B 69 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 118 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG B 118 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP C 16 CB - CG - OD1 ANGL. DEV. = -5.6 DEGREES REMARK 500 ASP C 24 CB - CG - OD1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP C 24 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG C 69 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ASP C 72 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP C 72 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ASP C 93 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 ARG C 118 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 94 -17.20 89.29 REMARK 500 ASP B 72 74.28 -100.63 REMARK 500 ASP B 93 39.51 -86.50 REMARK 500 GLU B 94 -43.07 82.51 REMARK 500 THR B 117 -156.26 -79.59 REMARK 500 ILE C 44 131.13 172.05 REMARK 500 GLU C 94 -34.22 -37.99 REMARK 500 LYS C 95 -85.31 -59.80 REMARK 500 ALA C 98 140.13 174.88 REMARK 500 ALA C 116 50.54 -66.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 902 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 961 O REMARK 620 2 ASP B 105 OD1 121.7 REMARK 620 3 HOH B 962 O 144.8 92.8 REMARK 620 4 HIS B 84 NE2 101.9 82.5 88.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 900 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 84 NE2 REMARK 620 2 ASP C 105 OD1 82.0 REMARK 620 3 HOH C 958 O 109.3 66.2 REMARK 620 4 HOH C 959 O 115.0 83.5 121.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 105 OD2 REMARK 620 2 HOH C 960 O 109.2 REMARK 620 3 HOH C 959 O 92.8 129.0 REMARK 620 4 GLU A 94 OE2 80.9 117.4 111.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ZN1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: ZN2 REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: ZN BOUND BETWEEN 2 MOLECULES REMARK 800 REMARK 800 SITE_IDENTIFIER: ZN3 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 902 DBREF 1BTG A 9 118 UNP P01139 NGF_MOUSE 130 239 DBREF 1BTG B 9 118 UNP P01139 NGF_MOUSE 130 239 DBREF 1BTG C 9 118 UNP P01139 NGF_MOUSE 130 239 SEQRES 1 A 110 MET GLY GLU PHE SER VAL CYS ASP SER VAL SER VAL TRP SEQRES 2 A 110 VAL GLY ASP LYS THR THR ALA THR ASP ILE LYS GLY LYS SEQRES 3 A 110 GLU VAL THR VAL LEU ALA GLU VAL ASN ILE ASN ASN SER SEQRES 4 A 110 VAL PHE ARG GLN TYR PHE PHE GLU THR LYS CYS ARG ALA SEQRES 5 A 110 SER ASN PRO VAL GLU SER GLY CYS ARG GLY ILE ASP SER SEQRES 6 A 110 LYS HIS TRP ASN SER TYR CYS THR THR THR HIS THR PHE SEQRES 7 A 110 VAL LYS ALA LEU THR THR ASP GLU LYS GLN ALA ALA TRP SEQRES 8 A 110 ARG PHE ILE ARG ILE ASP THR ALA CYS VAL CYS VAL LEU SEQRES 9 A 110 SER ARG LYS ALA THR ARG SEQRES 1 B 110 MET GLY GLU PHE SER VAL CYS ASP SER VAL SER VAL TRP SEQRES 2 B 110 VAL GLY ASP LYS THR THR ALA THR ASP ILE LYS GLY LYS SEQRES 3 B 110 GLU VAL THR VAL LEU ALA GLU VAL ASN ILE ASN ASN SER SEQRES 4 B 110 VAL PHE ARG GLN TYR PHE PHE GLU THR LYS CYS ARG ALA SEQRES 5 B 110 SER ASN PRO VAL GLU SER GLY CYS ARG GLY ILE ASP SER SEQRES 6 B 110 LYS HIS TRP ASN SER TYR CYS THR THR THR HIS THR PHE SEQRES 7 B 110 VAL LYS ALA LEU THR THR ASP GLU LYS GLN ALA ALA TRP SEQRES 8 B 110 ARG PHE ILE ARG ILE ASP THR ALA CYS VAL CYS VAL LEU SEQRES 9 B 110 SER ARG LYS ALA THR ARG SEQRES 1 C 110 MET GLY GLU PHE SER VAL CYS ASP SER VAL SER VAL TRP SEQRES 2 C 110 VAL GLY ASP LYS THR THR ALA THR ASP ILE LYS GLY LYS SEQRES 3 C 110 GLU VAL THR VAL LEU ALA GLU VAL ASN ILE ASN ASN SER SEQRES 4 C 110 VAL PHE ARG GLN TYR PHE PHE GLU THR LYS CYS ARG ALA SEQRES 5 C 110 SER ASN PRO VAL GLU SER GLY CYS ARG GLY ILE ASP SER SEQRES 6 C 110 LYS HIS TRP ASN SER TYR CYS THR THR THR HIS THR PHE SEQRES 7 C 110 VAL LYS ALA LEU THR THR ASP GLU LYS GLN ALA ALA TRP SEQRES 8 C 110 ARG PHE ILE ARG ILE ASP THR ALA CYS VAL CYS VAL LEU SEQRES 9 C 110 SER ARG LYS ALA THR ARG HET ZN B 902 1 HET ZN C 900 1 HET ZN C 901 1 HETNAM ZN ZINC ION FORMUL 4 ZN 3(ZN 2+) FORMUL 7 HOH *54(H2 O) SHEET 1 A 2 SER A 17 VAL A 22 0 SHEET 2 A 2 PHE A 53 CYS A 58 -1 N LYS A 57 O VAL A 18 SHEET 1 B 2 THR A 27 THR A 29 0 SHEET 2 B 2 GLU A 35 THR A 37 -1 N VAL A 36 O ALA A 28 SHEET 1 C 2 GLU A 41 ILE A 44 0 SHEET 2 C 2 SER A 47 ARG A 50 -1 N PHE A 49 O VAL A 42 SHEET 1 J 2 TRP A 76 THR A 92 0 SHEET 2 J 2 ALA A 97 ARG A 114 -1 N SER A 113 O ASN A 77 SHEET 1 D 2 SER B 17 VAL B 22 0 SHEET 2 D 2 PHE B 53 CYS B 58 -1 N LYS B 57 O VAL B 18 SHEET 1 E 2 THR B 27 THR B 29 0 SHEET 2 E 2 GLU B 35 THR B 37 -1 N VAL B 36 O ALA B 28 SHEET 1 F 2 GLU B 41 ASN B 43 0 SHEET 2 F 2 VAL B 48 ARG B 50 -1 N PHE B 49 O VAL B 42 SHEET 1 K 2 TRP B 76 THR B 92 0 SHEET 2 K 2 ALA B 97 ARG B 114 -1 N SER B 113 O ASN B 77 SHEET 1 G 2 SER C 17 VAL C 22 0 SHEET 2 G 2 PHE C 53 CYS C 58 -1 N LYS C 57 O VAL C 18 SHEET 1 H 2 THR C 27 THR C 29 0 SHEET 2 H 2 GLU C 35 THR C 37 -1 N VAL C 36 O ALA C 28 SHEET 1 I 2 GLU C 41 ASN C 43 0 SHEET 2 I 2 VAL C 48 ARG C 50 -1 N PHE C 49 O VAL C 42 SHEET 1 L 2 TRP C 76 THR C 92 0 SHEET 2 L 2 ALA C 97 ARG C 114 -1 N SER C 113 O ASN C 77 SSBOND 1 CYS A 15 CYS A 80 1555 1555 1.99 SSBOND 2 CYS A 58 CYS A 108 1555 1555 1.97 SSBOND 3 CYS A 68 CYS A 110 1555 1555 2.03 SSBOND 4 CYS B 15 CYS B 80 1555 1555 2.02 SSBOND 5 CYS B 58 CYS B 108 1555 1555 2.03 SSBOND 6 CYS B 68 CYS B 110 1555 1555 2.01 SSBOND 7 CYS C 15 CYS C 80 1555 1555 2.01 SSBOND 8 CYS C 58 CYS C 108 1555 1555 2.02 SSBOND 9 CYS C 68 CYS C 110 1555 1555 2.03 LINK ZN ZN B 902 O HOH B 961 1555 1555 1.95 LINK ZN ZN B 902 OD1 ASP B 105 1555 1555 2.04 LINK ZN ZN B 902 O HOH B 962 1555 1555 1.91 LINK ZN ZN B 902 NE2 HIS B 84 1555 1555 2.11 LINK ZN ZN C 900 NE2 HIS C 84 1555 1555 2.09 LINK ZN ZN C 900 OD1 ASP C 105 1555 1555 2.35 LINK ZN ZN C 900 O HOH C 958 1555 1555 2.06 LINK ZN ZN C 900 O HOH C 959 1555 1555 1.82 LINK ZN ZN C 901 OD2 ASP C 105 1555 1555 1.86 LINK ZN ZN C 901 O HOH C 960 1555 1555 2.30 LINK ZN ZN C 901 O HOH C 959 1555 1555 2.42 LINK ZN ZN C 901 OE2 GLU A 94 1555 4655 1.87 SITE 1 ZN1 2 VAL C 48 ASP C 105 SITE 1 ZN2 2 ASP C 105 GLU A 94 SITE 1 ZN3 2 ASP B 105 HIS B 84 SITE 1 AC1 5 HIS C 84 ASP C 105 ZN C 901 HOH C 958 SITE 2 AC1 5 HOH C 959 SITE 1 AC2 5 GLU A 94 ASP C 105 ZN C 900 HOH C 959 SITE 2 AC2 5 HOH C 960 SITE 1 AC3 4 HIS B 84 ASP B 105 HOH B 961 HOH B 962 CRYST1 109.800 93.900 58.900 90.00 123.10 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009107 0.000000 0.005937 0.00000 SCALE2 0.000000 0.010650 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020267 0.00000