data_1BXX # _entry.id 1BXX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.294 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1BXX RCSB RCSB008141 WWPDB D_1000008141 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BXX _pdbx_database_status.recvd_initial_deposition_date 1998-10-08 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Owen, D.J.' 1 'Evans, P.R.' 2 # _citation.id primary _citation.title 'A structural explanation for the recognition of tyrosine-based endocytotic signals.' _citation.journal_abbrev Science _citation.journal_volume 282 _citation.page_first 1327 _citation.page_last 1332 _citation.year 1998 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9812899 _citation.pdbx_database_id_DOI 10.1126/science.282.5392.1327 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Owen, D.J.' 1 primary 'Evans, P.R.' 2 # _cell.entry_id 1BXX _cell.length_a 125.260 _cell.length_b 125.260 _cell.length_c 73.790 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BXX _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEIN (AP50)' 32758.363 1 ? ? 'INTERNALIZATION SIGNAL BINDING DOMAIN' 'THE FIRST SEVEN RESIDUES OF THE POLYMER MAKE UP A HIS-TAG' 2 polymer syn 'PROTEIN (TGN38 PEPTIDE)' 808.860 1 ? ? ? 'HEXAPEPTIDE INTERNALISATION SIGNAL MOTIF FROM TGN38 DYQRLN' 3 water nat water 18.015 49 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MU2 ADAPTIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MHHHHHHQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTA DETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSN FKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNF EVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC ; ;MHHHHHHQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTA DETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSN FKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNF EVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC ; A ? 2 'polypeptide(L)' no no DYQRLN DYQRLN P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 GLN n 1 9 ILE n 1 10 GLY n 1 11 TRP n 1 12 ARG n 1 13 ARG n 1 14 GLU n 1 15 GLY n 1 16 ILE n 1 17 LYS n 1 18 TYR n 1 19 ARG n 1 20 ARG n 1 21 ASN n 1 22 GLU n 1 23 LEU n 1 24 PHE n 1 25 LEU n 1 26 ASP n 1 27 VAL n 1 28 LEU n 1 29 GLU n 1 30 SER n 1 31 VAL n 1 32 ASN n 1 33 LEU n 1 34 LEU n 1 35 MET n 1 36 SER n 1 37 PRO n 1 38 GLN n 1 39 GLY n 1 40 GLN n 1 41 VAL n 1 42 LEU n 1 43 SER n 1 44 ALA n 1 45 HIS n 1 46 VAL n 1 47 SER n 1 48 GLY n 1 49 ARG n 1 50 VAL n 1 51 VAL n 1 52 MET n 1 53 LYS n 1 54 SER n 1 55 TYR n 1 56 LEU n 1 57 SER n 1 58 GLY n 1 59 MET n 1 60 PRO n 1 61 GLU n 1 62 CYS n 1 63 LYS n 1 64 PHE n 1 65 GLY n 1 66 MET n 1 67 ASN n 1 68 ASP n 1 69 LYS n 1 70 ILE n 1 71 VAL n 1 72 ILE n 1 73 GLU n 1 74 LYS n 1 75 GLN n 1 76 GLY n 1 77 LYS n 1 78 GLY n 1 79 THR n 1 80 ALA n 1 81 ASP n 1 82 GLU n 1 83 THR n 1 84 SER n 1 85 LYS n 1 86 SER n 1 87 GLY n 1 88 LYS n 1 89 GLN n 1 90 SER n 1 91 ILE n 1 92 ALA n 1 93 ILE n 1 94 ASP n 1 95 ASP n 1 96 CYS n 1 97 THR n 1 98 PHE n 1 99 HIS n 1 100 GLN n 1 101 CYS n 1 102 VAL n 1 103 ARG n 1 104 LEU n 1 105 SER n 1 106 LYS n 1 107 PHE n 1 108 ASP n 1 109 SER n 1 110 GLU n 1 111 ARG n 1 112 SER n 1 113 ILE n 1 114 SER n 1 115 PHE n 1 116 ILE n 1 117 PRO n 1 118 PRO n 1 119 ASP n 1 120 GLY n 1 121 GLU n 1 122 PHE n 1 123 GLU n 1 124 LEU n 1 125 MET n 1 126 ARG n 1 127 TYR n 1 128 ARG n 1 129 THR n 1 130 THR n 1 131 LYS n 1 132 ASP n 1 133 ILE n 1 134 ILE n 1 135 LEU n 1 136 PRO n 1 137 PHE n 1 138 ARG n 1 139 VAL n 1 140 ILE n 1 141 PRO n 1 142 LEU n 1 143 VAL n 1 144 ARG n 1 145 GLU n 1 146 VAL n 1 147 GLY n 1 148 ARG n 1 149 THR n 1 150 LYS n 1 151 LEU n 1 152 GLU n 1 153 VAL n 1 154 LYS n 1 155 VAL n 1 156 VAL n 1 157 ILE n 1 158 LYS n 1 159 SER n 1 160 ASN n 1 161 PHE n 1 162 LYS n 1 163 PRO n 1 164 SER n 1 165 LEU n 1 166 LEU n 1 167 ALA n 1 168 GLN n 1 169 LYS n 1 170 ILE n 1 171 GLU n 1 172 VAL n 1 173 ARG n 1 174 ILE n 1 175 PRO n 1 176 THR n 1 177 PRO n 1 178 LEU n 1 179 ASN n 1 180 THR n 1 181 SER n 1 182 GLY n 1 183 VAL n 1 184 GLN n 1 185 VAL n 1 186 ILE n 1 187 CYS n 1 188 MET n 1 189 LYS n 1 190 GLY n 1 191 LYS n 1 192 ALA n 1 193 LYS n 1 194 TYR n 1 195 LYS n 1 196 ALA n 1 197 SER n 1 198 GLU n 1 199 ASN n 1 200 ALA n 1 201 ILE n 1 202 VAL n 1 203 TRP n 1 204 LYS n 1 205 ILE n 1 206 LYS n 1 207 ARG n 1 208 MET n 1 209 ALA n 1 210 GLY n 1 211 MET n 1 212 LYS n 1 213 GLU n 1 214 SER n 1 215 GLN n 1 216 ILE n 1 217 SER n 1 218 ALA n 1 219 GLU n 1 220 ILE n 1 221 GLU n 1 222 LEU n 1 223 LEU n 1 224 PRO n 1 225 THR n 1 226 ASN n 1 227 ASP n 1 228 LYS n 1 229 LYS n 1 230 LYS n 1 231 TRP n 1 232 ALA n 1 233 ARG n 1 234 PRO n 1 235 PRO n 1 236 ILE n 1 237 SER n 1 238 MET n 1 239 ASN n 1 240 PHE n 1 241 GLU n 1 242 VAL n 1 243 PRO n 1 244 PHE n 1 245 ALA n 1 246 PRO n 1 247 SER n 1 248 GLY n 1 249 LEU n 1 250 LYS n 1 251 VAL n 1 252 ARG n 1 253 TYR n 1 254 LEU n 1 255 LYS n 1 256 VAL n 1 257 PHE n 1 258 GLU n 1 259 PRO n 1 260 LYS n 1 261 LEU n 1 262 ASN n 1 263 TYR n 1 264 SER n 1 265 ASP n 1 266 HIS n 1 267 ASP n 1 268 VAL n 1 269 ILE n 1 270 LYS n 1 271 TRP n 1 272 VAL n 1 273 ARG n 1 274 TYR n 1 275 ILE n 1 276 GLY n 1 277 ARG n 1 278 SER n 1 279 GLY n 1 280 ILE n 1 281 TYR n 1 282 GLU n 1 283 THR n 1 284 ARG n 1 285 CYS n 2 1 ASP n 2 2 TYR n 2 3 GLN n 2 4 ARG n 2 5 LEU n 2 6 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Norway rat' _entity_src_gen.gene_src_genus Rattus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene AP50 _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PMW172H6 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PMW172H6 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP AP2M1_RAT 1 P84092 ? ? ? 2 PDB 1BXX 2 1BXX ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1BXX A 8 ? 285 ? P84092 158 ? 435 ? 158 435 2 2 1BXX P 1 ? 6 ? 1BXX 1 ? 6 ? 1 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1BXX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.98 _exptl_crystal.density_percent_sol 75.30 _exptl_crystal.description 'ISOMORPHOUS TO 1BW8' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.1 _exptl_crystal_grow.pdbx_details ;HANGING DROP, 2.2M NACL, 0.4M NA/K PHOSPHATE, 10MM DTT 0.1M MES PH 7.1, 15% GLYCEROL, 16DEGREES, MOLAR RATIO OF PEPTIDE TO PROTEIN 3:1, vapor diffusion - hanging drop, temperature 289K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ADSC _diffrn_detector.pdbx_collection_date 1998-09-12 _diffrn_detector.details MIRROR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator YES _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.877 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX9.6' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX9.6 _diffrn_source.pdbx_wavelength 0.877 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1BXX _reflns.observed_criterion_sigma_I 4 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 22 _reflns.d_resolution_high 2.70 _reflns.number_obs 18413 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.101 _reflns.pdbx_Rsym_value 0.101 _reflns.pdbx_netI_over_sigmaI 23.5 _reflns.B_iso_Wilson_estimate 78 _reflns.pdbx_redundancy 15.8 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.70 _reflns_shell.d_res_low 2.85 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs 0.9999999 _reflns_shell.pdbx_Rsym_value 0.99999 _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 14.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1BXX _refine.ls_number_reflns_obs 18413 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22 _refine.ls_d_res_high 2.7 _refine.ls_percent_reflns_obs 98.4 _refine.ls_R_factor_obs 0.2820000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2630000 _refine.ls_R_factor_R_free 0.3250000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.3 _refine.ls_number_reflns_R_free 801 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 78 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1BW8 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.32 _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2093 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 49 _refine_hist.number_atoms_total 2142 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 22 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.012 0.02 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.040 0.04 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.038 0.05 ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 1.8 2 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 3.1 4 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 3.8 4 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 5.3 5 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.0025 0.01 ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.122 0.150 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.198 0.30 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.252 0.30 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd 0.189 0.30 ? ? 'X-RAY DIFFRACTION' ? p_planar_tor 1.7 7 ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor 17.6 15 ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor 24.1 20 ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1BXX _struct.title 'MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH TGN38 INTERNALIZATION PEPTIDE DYQRLN' _struct.pdbx_descriptor 'PROTEIN (AP50)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BXX _struct_keywords.pdbx_keywords ENDOCYTOSIS/EXOCYTOSIS _struct_keywords.text 'ENDOCYTOSIS, ADAPTOR, PEPTIDE COMPLEX, ENDOCYTOSIS-EXOCYTOSIS COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 265 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ASP _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 267 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 415 _struct_conf.end_auth_comp_id ASP _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 417 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 3 ? D ? 4 ? E ? 2 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 269 ? SER A 278 ? ILE A 419 SER A 428 A 2 GLU A 22 ? MET A 35 ? GLU A 172 MET A 185 A 3 VAL A 41 ? TYR A 55 ? VAL A 191 TYR A 205 A 4 GLY A 120 ? THR A 129 ? GLY A 270 THR A 279 A 5 ASP A 95 ? PHE A 98 ? ASP A 245 PHE A 248 B 1 LEU A 33 ? MET A 35 ? LEU A 183 MET A 185 B 2 TYR A 281 ? THR A 283 ? TYR A 431 THR A 433 C 1 ILE A 113 ? PHE A 115 ? ILE A 263 PHE A 265 C 2 GLU A 61 ? MET A 66 ? GLU A 211 MET A 216 C 3 VAL A 251 ? PHE A 257 ? VAL A 401 PHE A 407 D 1 PHE A 137 ? VAL A 146 ? PHE A 287 VAL A 296 D 2 LYS A 150 ? SER A 159 ? LYS A 300 SER A 309 D 3 GLU A 213 ? LEU A 222 ? GLU A 363 LEU A 372 D 4 THR A 180 ? CYS A 187 ? THR A 330 CYS A 337 E 1 LEU A 166 ? GLN A 168 ? LEU A 316 GLN A 318 E 2 ARG A 207 ? ALA A 209 ? ARG A 357 ALA A 359 F 1 SER A 237 ? ASN A 239 ? SER A 387 ASN A 389 F 2 ILE A 170 ? PRO A 175 ? ILE A 320 PRO A 325 F 3 ALA A 200 ? ILE A 205 ? ALA A 350 ILE A 355 F 4 LYS A 191 ? LYS A 195 ? LYS A 341 LYS A 345 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 269 ? O ILE A 419 N LEU A 23 ? N LEU A 173 A 2 3 O GLU A 22 ? O GLU A 172 N TYR A 55 ? N TYR A 205 A 3 4 O VAL A 46 ? O VAL A 196 N THR A 129 ? N THR A 279 A 4 5 O ARG A 126 ? O ARG A 276 N THR A 97 ? N THR A 247 B 1 2 O LEU A 33 ? O LEU A 183 N GLU A 282 ? N GLU A 432 C 1 2 O ILE A 113 ? O ILE A 263 N PHE A 64 ? N PHE A 214 C 2 3 O GLU A 61 ? O GLU A 211 N PHE A 257 ? N PHE A 407 D 1 2 O ARG A 138 ? O ARG A 288 N LYS A 158 ? N LYS A 308 D 2 3 O LEU A 151 ? O LEU A 301 N ILE A 220 ? N ILE A 370 D 3 4 O SER A 217 ? O SER A 367 N ILE A 186 ? N ILE A 336 E 1 2 O ALA A 167 ? O ALA A 317 N MET A 208 ? N MET A 358 F 1 2 O SER A 237 ? O SER A 387 N ARG A 173 ? N ARG A 323 F 2 3 O ILE A 170 ? O ILE A 320 N ILE A 205 ? N ILE A 355 F 3 4 O ALA A 200 ? O ALA A 350 N LYS A 195 ? N LYS A 345 # _database_PDB_matrix.entry_id 1BXX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1BXX _atom_sites.fract_transf_matrix[1][1] 0.007977 _atom_sites.fract_transf_matrix[1][2] 0.004605 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009218 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013552 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 151 ? ? ? A . n A 1 2 HIS 2 152 ? ? ? A . n A 1 3 HIS 3 153 ? ? ? A . n A 1 4 HIS 4 154 ? ? ? A . n A 1 5 HIS 5 155 ? ? ? A . n A 1 6 HIS 6 156 ? ? ? A . n A 1 7 HIS 7 157 ? ? ? A . n A 1 8 GLN 8 158 ? ? ? A . n A 1 9 ILE 9 159 159 ILE ILE A . n A 1 10 GLY 10 160 160 GLY GLY A . n A 1 11 TRP 11 161 161 TRP TRP A . n A 1 12 ARG 12 162 162 ARG ARG A . n A 1 13 ARG 13 163 163 ARG ARG A . n A 1 14 GLU 14 164 164 GLU GLU A . n A 1 15 GLY 15 165 165 GLY GLY A . n A 1 16 ILE 16 166 166 ILE ILE A . n A 1 17 LYS 17 167 167 LYS LYS A . n A 1 18 TYR 18 168 168 TYR TYR A . n A 1 19 ARG 19 169 169 ARG ARG A . n A 1 20 ARG 20 170 170 ARG ARG A . n A 1 21 ASN 21 171 171 ASN ASN A . n A 1 22 GLU 22 172 172 GLU GLU A . n A 1 23 LEU 23 173 173 LEU LEU A . n A 1 24 PHE 24 174 174 PHE PHE A . n A 1 25 LEU 25 175 175 LEU LEU A . n A 1 26 ASP 26 176 176 ASP ASP A . n A 1 27 VAL 27 177 177 VAL VAL A . n A 1 28 LEU 28 178 178 LEU LEU A . n A 1 29 GLU 29 179 179 GLU GLU A . n A 1 30 SER 30 180 180 SER SER A . n A 1 31 VAL 31 181 181 VAL VAL A . n A 1 32 ASN 32 182 182 ASN ASN A . n A 1 33 LEU 33 183 183 LEU LEU A . n A 1 34 LEU 34 184 184 LEU LEU A . n A 1 35 MET 35 185 185 MET MET A . n A 1 36 SER 36 186 186 SER SER A . n A 1 37 PRO 37 187 187 PRO PRO A . n A 1 38 GLN 38 188 188 GLN GLN A . n A 1 39 GLY 39 189 189 GLY GLY A . n A 1 40 GLN 40 190 190 GLN GLN A . n A 1 41 VAL 41 191 191 VAL VAL A . n A 1 42 LEU 42 192 192 LEU LEU A . n A 1 43 SER 43 193 193 SER SER A . n A 1 44 ALA 44 194 194 ALA ALA A . n A 1 45 HIS 45 195 195 HIS HIS A . n A 1 46 VAL 46 196 196 VAL VAL A . n A 1 47 SER 47 197 197 SER SER A . n A 1 48 GLY 48 198 198 GLY GLY A . n A 1 49 ARG 49 199 199 ARG ARG A . n A 1 50 VAL 50 200 200 VAL VAL A . n A 1 51 VAL 51 201 201 VAL VAL A . n A 1 52 MET 52 202 202 MET MET A . n A 1 53 LYS 53 203 203 LYS LYS A . n A 1 54 SER 54 204 204 SER SER A . n A 1 55 TYR 55 205 205 TYR TYR A . n A 1 56 LEU 56 206 206 LEU LEU A . n A 1 57 SER 57 207 207 SER SER A . n A 1 58 GLY 58 208 208 GLY GLY A . n A 1 59 MET 59 209 209 MET MET A . n A 1 60 PRO 60 210 210 PRO PRO A . n A 1 61 GLU 61 211 211 GLU GLU A . n A 1 62 CYS 62 212 212 CYS CYS A . n A 1 63 LYS 63 213 213 LYS LYS A . n A 1 64 PHE 64 214 214 PHE PHE A . n A 1 65 GLY 65 215 215 GLY GLY A . n A 1 66 MET 66 216 216 MET MET A . n A 1 67 ASN 67 217 217 ASN ASN A . n A 1 68 ASP 68 218 218 ASP ASP A . n A 1 69 LYS 69 219 219 LYS LYS A . n A 1 70 ILE 70 220 220 ILE ILE A . n A 1 71 VAL 71 221 ? ? ? A . n A 1 72 ILE 72 222 ? ? ? A . n A 1 73 GLU 73 223 ? ? ? A . n A 1 74 LYS 74 224 ? ? ? A . n A 1 75 GLN 75 225 ? ? ? A . n A 1 76 GLY 76 226 ? ? ? A . n A 1 77 LYS 77 227 ? ? ? A . n A 1 78 GLY 78 228 ? ? ? A . n A 1 79 THR 79 229 ? ? ? A . n A 1 80 ALA 80 230 ? ? ? A . n A 1 81 ASP 81 231 ? ? ? A . n A 1 82 GLU 82 232 ? ? ? A . n A 1 83 THR 83 233 ? ? ? A . n A 1 84 SER 84 234 ? ? ? A . n A 1 85 LYS 85 235 ? ? ? A . n A 1 86 SER 86 236 ? ? ? A . n A 1 87 GLY 87 237 ? ? ? A . n A 1 88 LYS 88 238 238 LYS LYS A . n A 1 89 GLN 89 239 239 GLN GLN A . n A 1 90 SER 90 240 240 SER SER A . n A 1 91 ILE 91 241 241 ILE ILE A . n A 1 92 ALA 92 242 242 ALA ALA A . n A 1 93 ILE 93 243 243 ILE ILE A . n A 1 94 ASP 94 244 244 ASP ASP A . n A 1 95 ASP 95 245 245 ASP ASP A . n A 1 96 CYS 96 246 246 CYS CYS A . n A 1 97 THR 97 247 247 THR THR A . n A 1 98 PHE 98 248 248 PHE PHE A . n A 1 99 HIS 99 249 249 HIS HIS A . n A 1 100 GLN 100 250 250 GLN GLN A . n A 1 101 CYS 101 251 251 CYS CYS A . n A 1 102 VAL 102 252 252 VAL VAL A . n A 1 103 ARG 103 253 253 ARG ARG A . n A 1 104 LEU 104 254 254 LEU LEU A . n A 1 105 SER 105 255 255 SER SER A . n A 1 106 LYS 106 256 ? ? ? A . n A 1 107 PHE 107 257 ? ? ? A . n A 1 108 ASP 108 258 ? ? ? A . n A 1 109 SER 109 259 ? ? ? A . n A 1 110 GLU 110 260 260 GLU GLU A . n A 1 111 ARG 111 261 261 ARG ARG A . n A 1 112 SER 112 262 262 SER SER A . n A 1 113 ILE 113 263 263 ILE ILE A . n A 1 114 SER 114 264 264 SER SER A . n A 1 115 PHE 115 265 265 PHE PHE A . n A 1 116 ILE 116 266 266 ILE ILE A . n A 1 117 PRO 117 267 267 PRO PRO A . n A 1 118 PRO 118 268 268 PRO PRO A . n A 1 119 ASP 119 269 269 ASP ASP A . n A 1 120 GLY 120 270 270 GLY GLY A . n A 1 121 GLU 121 271 271 GLU GLU A . n A 1 122 PHE 122 272 272 PHE PHE A . n A 1 123 GLU 123 273 273 GLU GLU A . n A 1 124 LEU 124 274 274 LEU LEU A . n A 1 125 MET 125 275 275 MET MET A . n A 1 126 ARG 126 276 276 ARG ARG A . n A 1 127 TYR 127 277 277 TYR TYR A . n A 1 128 ARG 128 278 278 ARG ARG A . n A 1 129 THR 129 279 279 THR THR A . n A 1 130 THR 130 280 280 THR THR A . n A 1 131 LYS 131 281 281 LYS LYS A . n A 1 132 ASP 132 282 282 ASP ASP A . n A 1 133 ILE 133 283 283 ILE ILE A . n A 1 134 ILE 134 284 284 ILE ILE A . n A 1 135 LEU 135 285 285 LEU LEU A . n A 1 136 PRO 136 286 286 PRO PRO A . n A 1 137 PHE 137 287 287 PHE PHE A . n A 1 138 ARG 138 288 288 ARG ARG A . n A 1 139 VAL 139 289 289 VAL VAL A . n A 1 140 ILE 140 290 290 ILE ILE A . n A 1 141 PRO 141 291 291 PRO PRO A . n A 1 142 LEU 142 292 292 LEU LEU A . n A 1 143 VAL 143 293 293 VAL VAL A . n A 1 144 ARG 144 294 294 ARG ARG A . n A 1 145 GLU 145 295 295 GLU GLU A . n A 1 146 VAL 146 296 296 VAL VAL A . n A 1 147 GLY 147 297 297 GLY GLY A . n A 1 148 ARG 148 298 298 ARG ARG A . n A 1 149 THR 149 299 299 THR THR A . n A 1 150 LYS 150 300 300 LYS LYS A . n A 1 151 LEU 151 301 301 LEU LEU A . n A 1 152 GLU 152 302 302 GLU GLU A . n A 1 153 VAL 153 303 303 VAL VAL A . n A 1 154 LYS 154 304 304 LYS LYS A . n A 1 155 VAL 155 305 305 VAL VAL A . n A 1 156 VAL 156 306 306 VAL VAL A . n A 1 157 ILE 157 307 307 ILE ILE A . n A 1 158 LYS 158 308 308 LYS LYS A . n A 1 159 SER 159 309 309 SER SER A . n A 1 160 ASN 160 310 310 ASN ASN A . n A 1 161 PHE 161 311 311 PHE PHE A . n A 1 162 LYS 162 312 312 LYS LYS A . n A 1 163 PRO 163 313 313 PRO PRO A . n A 1 164 SER 164 314 314 SER SER A . n A 1 165 LEU 165 315 315 LEU LEU A . n A 1 166 LEU 166 316 316 LEU LEU A . n A 1 167 ALA 167 317 317 ALA ALA A . n A 1 168 GLN 168 318 318 GLN GLN A . n A 1 169 LYS 169 319 319 LYS LYS A . n A 1 170 ILE 170 320 320 ILE ILE A . n A 1 171 GLU 171 321 321 GLU GLU A . n A 1 172 VAL 172 322 322 VAL VAL A . n A 1 173 ARG 173 323 323 ARG ARG A . n A 1 174 ILE 174 324 324 ILE ILE A . n A 1 175 PRO 175 325 325 PRO PRO A . n A 1 176 THR 176 326 326 THR THR A . n A 1 177 PRO 177 327 327 PRO PRO A . n A 1 178 LEU 178 328 328 LEU LEU A . n A 1 179 ASN 179 329 329 ASN ASN A . n A 1 180 THR 180 330 330 THR THR A . n A 1 181 SER 181 331 331 SER SER A . n A 1 182 GLY 182 332 332 GLY GLY A . n A 1 183 VAL 183 333 333 VAL VAL A . n A 1 184 GLN 184 334 334 GLN GLN A . n A 1 185 VAL 185 335 335 VAL VAL A . n A 1 186 ILE 186 336 336 ILE ILE A . n A 1 187 CYS 187 337 337 CYS CYS A . n A 1 188 MET 188 338 338 MET MET A . n A 1 189 LYS 189 339 339 LYS LYS A . n A 1 190 GLY 190 340 340 GLY GLY A . n A 1 191 LYS 191 341 341 LYS LYS A . n A 1 192 ALA 192 342 342 ALA ALA A . n A 1 193 LYS 193 343 343 LYS LYS A . n A 1 194 TYR 194 344 344 TYR TYR A . n A 1 195 LYS 195 345 345 LYS LYS A . n A 1 196 ALA 196 346 346 ALA ALA A . n A 1 197 SER 197 347 347 SER SER A . n A 1 198 GLU 198 348 348 GLU GLU A . n A 1 199 ASN 199 349 349 ASN ASN A . n A 1 200 ALA 200 350 350 ALA ALA A . n A 1 201 ILE 201 351 351 ILE ILE A . n A 1 202 VAL 202 352 352 VAL VAL A . n A 1 203 TRP 203 353 353 TRP TRP A . n A 1 204 LYS 204 354 354 LYS LYS A . n A 1 205 ILE 205 355 355 ILE ILE A . n A 1 206 LYS 206 356 356 LYS LYS A . n A 1 207 ARG 207 357 357 ARG ARG A . n A 1 208 MET 208 358 358 MET MET A . n A 1 209 ALA 209 359 359 ALA ALA A . n A 1 210 GLY 210 360 360 GLY GLY A . n A 1 211 MET 211 361 361 MET MET A . n A 1 212 LYS 212 362 362 LYS LYS A . n A 1 213 GLU 213 363 363 GLU GLU A . n A 1 214 SER 214 364 364 SER SER A . n A 1 215 GLN 215 365 365 GLN GLN A . n A 1 216 ILE 216 366 366 ILE ILE A . n A 1 217 SER 217 367 367 SER SER A . n A 1 218 ALA 218 368 368 ALA ALA A . n A 1 219 GLU 219 369 369 GLU GLU A . n A 1 220 ILE 220 370 370 ILE ILE A . n A 1 221 GLU 221 371 371 GLU GLU A . n A 1 222 LEU 222 372 372 LEU LEU A . n A 1 223 LEU 223 373 373 LEU LEU A . n A 1 224 PRO 224 374 374 PRO PRO A . n A 1 225 THR 225 375 375 THR THR A . n A 1 226 ASN 226 376 376 ASN ASN A . n A 1 227 ASP 227 377 377 ASP ASP A . n A 1 228 LYS 228 378 378 LYS LYS A . n A 1 229 LYS 229 379 379 LYS LYS A . n A 1 230 LYS 230 380 380 LYS LYS A . n A 1 231 TRP 231 381 381 TRP TRP A . n A 1 232 ALA 232 382 382 ALA ALA A . n A 1 233 ARG 233 383 383 ARG ARG A . n A 1 234 PRO 234 384 384 PRO PRO A . n A 1 235 PRO 235 385 385 PRO PRO A . n A 1 236 ILE 236 386 386 ILE ILE A . n A 1 237 SER 237 387 387 SER SER A . n A 1 238 MET 238 388 388 MET MET A . n A 1 239 ASN 239 389 389 ASN ASN A . n A 1 240 PHE 240 390 390 PHE PHE A . n A 1 241 GLU 241 391 391 GLU GLU A . n A 1 242 VAL 242 392 392 VAL VAL A . n A 1 243 PRO 243 393 393 PRO PRO A . n A 1 244 PHE 244 394 394 PHE PHE A . n A 1 245 ALA 245 395 395 ALA ALA A . n A 1 246 PRO 246 396 396 PRO PRO A . n A 1 247 SER 247 397 397 SER SER A . n A 1 248 GLY 248 398 398 GLY GLY A . n A 1 249 LEU 249 399 399 LEU LEU A . n A 1 250 LYS 250 400 400 LYS LYS A . n A 1 251 VAL 251 401 401 VAL VAL A . n A 1 252 ARG 252 402 402 ARG ARG A . n A 1 253 TYR 253 403 403 TYR TYR A . n A 1 254 LEU 254 404 404 LEU LEU A . n A 1 255 LYS 255 405 405 LYS LYS A . n A 1 256 VAL 256 406 406 VAL VAL A . n A 1 257 PHE 257 407 407 PHE PHE A . n A 1 258 GLU 258 408 408 GLU GLU A . n A 1 259 PRO 259 409 409 PRO PRO A . n A 1 260 LYS 260 410 410 LYS LYS A . n A 1 261 LEU 261 411 411 LEU LEU A . n A 1 262 ASN 262 412 412 ASN ASN A . n A 1 263 TYR 263 413 413 TYR TYR A . n A 1 264 SER 264 414 414 SER SER A . n A 1 265 ASP 265 415 415 ASP ASP A . n A 1 266 HIS 266 416 416 HIS HIS A . n A 1 267 ASP 267 417 417 ASP ASP A . n A 1 268 VAL 268 418 418 VAL VAL A . n A 1 269 ILE 269 419 419 ILE ILE A . n A 1 270 LYS 270 420 420 LYS LYS A . n A 1 271 TRP 271 421 421 TRP TRP A . n A 1 272 VAL 272 422 422 VAL VAL A . n A 1 273 ARG 273 423 423 ARG ARG A . n A 1 274 TYR 274 424 424 TYR TYR A . n A 1 275 ILE 275 425 425 ILE ILE A . n A 1 276 GLY 276 426 426 GLY GLY A . n A 1 277 ARG 277 427 427 ARG ARG A . n A 1 278 SER 278 428 428 SER SER A . n A 1 279 GLY 279 429 429 GLY GLY A . n A 1 280 ILE 280 430 430 ILE ILE A . n A 1 281 TYR 281 431 431 TYR TYR A . n A 1 282 GLU 282 432 432 GLU GLU A . n A 1 283 THR 283 433 433 THR THR A . n A 1 284 ARG 284 434 434 ARG ARG A . n A 1 285 CYS 285 435 435 CYS CYS A . n B 2 1 ASP 1 1 1 ASP ASP P . n B 2 2 TYR 2 2 2 TYR TYR P . n B 2 3 GLN 3 3 3 GLN GLN P . n B 2 4 ARG 4 4 4 ARG ARG P . n B 2 5 LEU 5 5 5 LEU LEU P . n B 2 6 ASN 6 6 6 ASN ASN P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 1 1 HOH HOH A . C 3 HOH 2 2 2 HOH HOH A . C 3 HOH 3 3 3 HOH HOH A . C 3 HOH 4 4 4 HOH HOH A . C 3 HOH 5 5 5 HOH HOH A . C 3 HOH 6 6 6 HOH HOH A . C 3 HOH 7 7 7 HOH HOH A . C 3 HOH 8 9 9 HOH HOH A . C 3 HOH 9 10 10 HOH HOH A . C 3 HOH 10 11 11 HOH HOH A . C 3 HOH 11 12 12 HOH HOH A . C 3 HOH 12 13 13 HOH HOH A . C 3 HOH 13 14 14 HOH HOH A . C 3 HOH 14 15 15 HOH HOH A . C 3 HOH 15 16 16 HOH HOH A . C 3 HOH 16 17 17 HOH HOH A . C 3 HOH 17 18 18 HOH HOH A . C 3 HOH 18 19 19 HOH HOH A . C 3 HOH 19 20 20 HOH HOH A . C 3 HOH 20 21 21 HOH HOH A . C 3 HOH 21 22 22 HOH HOH A . C 3 HOH 22 23 23 HOH HOH A . C 3 HOH 23 24 24 HOH HOH A . C 3 HOH 24 25 25 HOH HOH A . C 3 HOH 25 28 28 HOH HOH A . C 3 HOH 26 29 29 HOH HOH A . C 3 HOH 27 30 30 HOH HOH A . C 3 HOH 28 31 31 HOH HOH A . C 3 HOH 29 32 32 HOH HOH A . C 3 HOH 30 33 33 HOH HOH A . C 3 HOH 31 34 34 HOH HOH A . C 3 HOH 32 35 35 HOH HOH A . C 3 HOH 33 36 36 HOH HOH A . C 3 HOH 34 37 37 HOH HOH A . C 3 HOH 35 38 38 HOH HOH A . C 3 HOH 36 39 39 HOH HOH A . C 3 HOH 37 40 40 HOH HOH A . C 3 HOH 38 41 41 HOH HOH A . C 3 HOH 39 42 42 HOH HOH A . C 3 HOH 40 43 43 HOH HOH A . C 3 HOH 41 44 44 HOH HOH A . C 3 HOH 42 46 46 HOH HOH A . C 3 HOH 43 47 47 HOH HOH A . C 3 HOH 44 48 48 HOH HOH A . C 3 HOH 45 49 49 HOH HOH A . C 3 HOH 46 50 50 HOH HOH A . C 3 HOH 47 51 51 HOH HOH A . D 3 HOH 1 8 8 HOH HOH P . D 3 HOH 2 26 26 HOH HOH P . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 870 ? 1 MORE -5 ? 1 'SSA (A^2)' 14210 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-11-25 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-05-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Source and taxonomy' 5 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity 2 4 'Structure model' pdbx_entity_src_syn # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_entity.src_method' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement . ? 1 MOSFLM 'data reduction' . ? 2 CCP4 'data scaling' '(SCALA)' ? 3 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CD A ARG 162 ? ? NE A ARG 162 ? ? CZ A ARG 162 ? ? 134.14 123.60 10.54 1.40 N 2 1 NE A ARG 162 ? ? CZ A ARG 162 ? ? NH2 A ARG 162 ? ? 116.69 120.30 -3.61 0.50 N 3 1 NE A ARG 170 ? ? CZ A ARG 170 ? ? NH2 A ARG 170 ? ? 117.19 120.30 -3.11 0.50 N 4 1 N A GLU 172 ? ? CA A GLU 172 ? ? CB A GLU 172 ? ? 99.45 110.60 -11.15 1.80 N 5 1 CB A ASP 176 ? ? CG A ASP 176 ? ? OD2 A ASP 176 ? ? 123.78 118.30 5.48 0.90 N 6 1 NE A ARG 199 ? ? CZ A ARG 199 ? ? NH1 A ARG 199 ? ? 124.02 120.30 3.72 0.50 N 7 1 NE A ARG 199 ? ? CZ A ARG 199 ? ? NH2 A ARG 199 ? ? 115.88 120.30 -4.42 0.50 N 8 1 CB A TYR 205 ? ? CG A TYR 205 ? ? CD2 A TYR 205 ? ? 125.98 121.00 4.98 0.60 N 9 1 CB A TYR 205 ? ? CG A TYR 205 ? ? CD1 A TYR 205 ? ? 116.50 121.00 -4.50 0.60 N 10 1 CA A CYS 246 ? ? CB A CYS 246 ? ? SG A CYS 246 ? ? 123.08 114.20 8.88 1.10 N 11 1 NE A ARG 253 ? ? CZ A ARG 253 ? ? NH1 A ARG 253 ? ? 123.87 120.30 3.57 0.50 N 12 1 NE A ARG 278 ? ? CZ A ARG 278 ? ? NH1 A ARG 278 ? ? 115.85 120.30 -4.45 0.50 N 13 1 NE A ARG 278 ? ? CZ A ARG 278 ? ? NH2 A ARG 278 ? ? 125.05 120.30 4.75 0.50 N 14 1 CD A ARG 294 ? ? NE A ARG 294 ? ? CZ A ARG 294 ? ? 140.40 123.60 16.80 1.40 N 15 1 NE A ARG 294 ? ? CZ A ARG 294 ? ? NH2 A ARG 294 ? ? 114.87 120.30 -5.43 0.50 N 16 1 N A ALA 317 ? ? CA A ALA 317 ? ? CB A ALA 317 ? ? 118.54 110.10 8.44 1.40 N 17 1 CB A ARG 323 ? ? CA A ARG 323 ? ? C A ARG 323 ? ? 122.69 110.40 12.29 2.00 N 18 1 NH1 A ARG 323 ? ? CZ A ARG 323 ? ? NH2 A ARG 323 ? ? 126.95 119.40 7.55 1.10 N 19 1 NE A ARG 323 ? ? CZ A ARG 323 ? ? NH2 A ARG 323 ? ? 114.39 120.30 -5.91 0.50 N 20 1 NE A ARG 402 ? ? CZ A ARG 402 ? ? NH2 A ARG 402 ? ? 125.55 120.30 5.25 0.50 N 21 1 N A GLY 429 ? ? CA A GLY 429 ? ? C A GLY 429 ? ? 96.37 113.10 -16.73 2.50 N 22 1 OE1 A GLU 432 ? ? CD A GLU 432 ? ? OE2 A GLU 432 ? ? 131.36 123.30 8.06 1.20 N 23 1 NE A ARG 434 ? ? CZ A ARG 434 ? ? NH1 A ARG 434 ? ? 129.12 120.30 8.82 0.50 N 24 1 NE A ARG 434 ? ? CZ A ARG 434 ? ? NH2 A ARG 434 ? ? 112.88 120.30 -7.42 0.50 N 25 1 NE P ARG 4 ? ? CZ P ARG 4 ? ? NH1 P ARG 4 ? ? 124.86 120.30 4.56 0.50 N 26 1 NE P ARG 4 ? ? CZ P ARG 4 ? ? NH2 P ARG 4 ? ? 116.06 120.30 -4.24 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 246 ? ? 176.93 153.13 2 1 GLN A 250 ? ? -38.32 -35.01 3 1 LEU A 254 ? ? -15.56 -64.17 4 1 ASN A 329 ? ? -86.05 33.75 5 1 LEU A 404 ? ? -150.94 88.35 6 1 LYS A 410 ? ? -63.87 -71.20 7 1 ASN A 412 ? ? -89.34 41.58 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 169 ? CG ? A ARG 19 CG 2 1 Y 1 A ARG 169 ? CD ? A ARG 19 CD 3 1 Y 1 A ARG 169 ? NE ? A ARG 19 NE 4 1 Y 1 A ARG 169 ? CZ ? A ARG 19 CZ 5 1 Y 1 A ARG 169 ? NH1 ? A ARG 19 NH1 6 1 Y 1 A ARG 169 ? NH2 ? A ARG 19 NH2 7 1 Y 1 A LYS 238 ? CG ? A LYS 88 CG 8 1 Y 1 A LYS 238 ? CD ? A LYS 88 CD 9 1 Y 1 A LYS 238 ? CE ? A LYS 88 CE 10 1 Y 1 A LYS 238 ? NZ ? A LYS 88 NZ 11 1 Y 1 A ARG 261 ? CD ? A ARG 111 CD 12 1 Y 1 A ARG 261 ? NE ? A ARG 111 NE 13 1 Y 1 A ARG 261 ? CZ ? A ARG 111 CZ 14 1 Y 1 A ARG 261 ? NH1 ? A ARG 111 NH1 15 1 Y 1 A ARG 261 ? NH2 ? A ARG 111 NH2 16 1 Y 1 A LYS 281 ? CD ? A LYS 131 CD 17 1 Y 1 A LYS 281 ? CE ? A LYS 131 CE 18 1 Y 1 A LYS 281 ? NZ ? A LYS 131 NZ 19 1 Y 1 A ARG 298 ? CD ? A ARG 148 CD 20 1 Y 1 A ARG 298 ? NE ? A ARG 148 NE 21 1 Y 1 A ARG 298 ? CZ ? A ARG 148 CZ 22 1 Y 1 A ARG 298 ? NH1 ? A ARG 148 NH1 23 1 Y 1 A ARG 298 ? NH2 ? A ARG 148 NH2 24 1 Y 1 A LYS 341 ? CD ? A LYS 191 CD 25 1 Y 1 A LYS 341 ? CE ? A LYS 191 CE 26 1 Y 1 A LYS 341 ? NZ ? A LYS 191 NZ 27 1 Y 1 A ARG 357 ? NE ? A ARG 207 NE 28 1 Y 1 A ARG 357 ? CZ ? A ARG 207 CZ 29 1 Y 1 A ARG 357 ? NH1 ? A ARG 207 NH1 30 1 Y 1 A ARG 357 ? NH2 ? A ARG 207 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 151 ? A MET 1 2 1 Y 1 A HIS 152 ? A HIS 2 3 1 Y 1 A HIS 153 ? A HIS 3 4 1 Y 1 A HIS 154 ? A HIS 4 5 1 Y 1 A HIS 155 ? A HIS 5 6 1 Y 1 A HIS 156 ? A HIS 6 7 1 Y 1 A HIS 157 ? A HIS 7 8 1 Y 1 A GLN 158 ? A GLN 8 9 1 Y 1 A VAL 221 ? A VAL 71 10 1 Y 1 A ILE 222 ? A ILE 72 11 1 Y 1 A GLU 223 ? A GLU 73 12 1 Y 1 A LYS 224 ? A LYS 74 13 1 Y 1 A GLN 225 ? A GLN 75 14 1 Y 1 A GLY 226 ? A GLY 76 15 1 Y 1 A LYS 227 ? A LYS 77 16 1 Y 1 A GLY 228 ? A GLY 78 17 1 Y 1 A THR 229 ? A THR 79 18 1 Y 1 A ALA 230 ? A ALA 80 19 1 Y 1 A ASP 231 ? A ASP 81 20 1 Y 1 A GLU 232 ? A GLU 82 21 1 Y 1 A THR 233 ? A THR 83 22 1 Y 1 A SER 234 ? A SER 84 23 1 Y 1 A LYS 235 ? A LYS 85 24 1 Y 1 A SER 236 ? A SER 86 25 1 Y 1 A GLY 237 ? A GLY 87 26 1 Y 1 A LYS 256 ? A LYS 106 27 1 Y 1 A PHE 257 ? A PHE 107 28 1 Y 1 A ASP 258 ? A ASP 108 29 1 Y 1 A SER 259 ? A SER 109 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #