data_1BYW # _entry.id 1BYW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.291 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1BYW RCSB RCSB008154 WWPDB D_1000008154 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1BYW _pdbx_database_status.recvd_initial_deposition_date 1998-10-15 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cabral, J.H.M.' 1 'Lee, A.' 2 'Mackinnon, R.' 3 # _citation.id primary _citation.title 'Crystal Structure and Functional Analysis of the Herg Potassium Channel N-Terminus: A Eukaryotic Pas Domain' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 95 _citation.page_first 649 _citation.page_last 655 _citation.year 1998 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9845367 _citation.pdbx_database_id_DOI '10.1016/S0092-8674(00)81635-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Cabral, J.H.M.' 1 primary 'Lee, A.' 2 primary 'Cohen, S.L.' 3 primary 'Chait, B.T.' 4 primary 'Li, M.' 5 primary 'Mackinnon, R.' 6 # _cell.entry_id 1BYW _cell.length_a 56.100 _cell.length_b 56.100 _cell.length_c 135.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1BYW _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTEIN (HUMAN ERG POTASSIUM CHANNEL)' 12346.396 1 ? R73C 'N-TERMINAL DOMAIN' ? 2 water nat water 18.015 27 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSC FLCLVDVVPVKNEDGAVIMFILNFEVVMEK ; _entity_poly.pdbx_seq_one_letter_code_can ;SRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSC FLCLVDVVPVKNEDGAVIMFILNFEVVMEK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ARG n 1 3 LYS n 1 4 PHE n 1 5 ILE n 1 6 ILE n 1 7 ALA n 1 8 ASN n 1 9 ALA n 1 10 ARG n 1 11 VAL n 1 12 GLU n 1 13 ASN n 1 14 CYS n 1 15 ALA n 1 16 VAL n 1 17 ILE n 1 18 TYR n 1 19 CYS n 1 20 ASN n 1 21 ASP n 1 22 GLY n 1 23 PHE n 1 24 CYS n 1 25 GLU n 1 26 LEU n 1 27 CYS n 1 28 GLY n 1 29 TYR n 1 30 SER n 1 31 ARG n 1 32 ALA n 1 33 GLU n 1 34 VAL n 1 35 MET n 1 36 GLN n 1 37 ARG n 1 38 PRO n 1 39 CYS n 1 40 THR n 1 41 CYS n 1 42 ASP n 1 43 PHE n 1 44 LEU n 1 45 HIS n 1 46 GLY n 1 47 PRO n 1 48 CYS n 1 49 THR n 1 50 GLN n 1 51 ARG n 1 52 ARG n 1 53 ALA n 1 54 ALA n 1 55 ALA n 1 56 GLN n 1 57 ILE n 1 58 ALA n 1 59 GLN n 1 60 ALA n 1 61 LEU n 1 62 LEU n 1 63 GLY n 1 64 ALA n 1 65 GLU n 1 66 GLU n 1 67 ARG n 1 68 LYS n 1 69 VAL n 1 70 GLU n 1 71 ILE n 1 72 ALA n 1 73 PHE n 1 74 TYR n 1 75 ARG n 1 76 LYS n 1 77 ASP n 1 78 GLY n 1 79 SER n 1 80 CYS n 1 81 PHE n 1 82 LEU n 1 83 CYS n 1 84 LEU n 1 85 VAL n 1 86 ASP n 1 87 VAL n 1 88 VAL n 1 89 PRO n 1 90 VAL n 1 91 LYS n 1 92 ASN n 1 93 GLU n 1 94 ASP n 1 95 GLY n 1 96 ALA n 1 97 VAL n 1 98 ILE n 1 99 MET n 1 100 PHE n 1 101 ILE n 1 102 LEU n 1 103 ASN n 1 104 PHE n 1 105 GLU n 1 106 VAL n 1 107 VAL n 1 108 MET n 1 109 GLU n 1 110 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location 'CELL MEMBRANE' _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location CYTOPLASM _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEX-4T2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KCH2_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q12809 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1BYW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 110 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q12809 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 135 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 26 _struct_ref_seq.pdbx_auth_seq_align_end 135 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1BYW _struct_ref_seq_dif.mon_id CYS _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 48 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q12809 _struct_ref_seq_dif.db_mon_id ARG _struct_ref_seq_dif.pdbx_seq_db_seq_num 73 _struct_ref_seq_dif.details 'ENGINEERED MUTATION' _struct_ref_seq_dif.pdbx_auth_seq_num 73 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1BYW _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_percent_sol 25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;PROTEIN SOLUTION AT 10MG/ML IN 10MM DTT, 5 MM N-OCTYL-GLUCO MIXED WITH EQUAL VOLUME OF 100 MM HEPES PH 7.0, 0.8-1.0 M SODIUM AND POTASSIUM TARTRAT ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9793 1.0 2 0.97896 1.0 3 0.973 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE F2' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline F2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9793, 0.97896, 0.973' # _reflns.entry_id 1BYW _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 13.0 _reflns.d_resolution_high 2.6 _reflns.number_obs 4131 _reflns.number_all ? _reflns.percent_possible_obs 95.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.092 _reflns.pdbx_netI_over_sigmaI 34 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.6 _reflns_shell.d_res_low 2.7 _reflns_shell.percent_possible_all 87.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.354 _reflns_shell.meanI_over_sigI_obs 5 _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1BYW _refine.ls_number_reflns_obs 4146 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 10000000.0 _refine.pdbx_data_cutoff_low_absF 0.001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 13.0 _refine.ls_d_res_high 2.6 _refine.ls_percent_reflns_obs 97 _refine.ls_R_factor_obs 0.252 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.252 _refine.ls_R_factor_R_free 0.286 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 14.3 _refine.ls_number_reflns_R_free 586 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 33.2 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK-SOLVENT CORRECTION' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 814 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 27 _refine_hist.number_atoms_total 841 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 13.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.004 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 0.833 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 26.42 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 0.455 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.098 1.5 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.032 2.0 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 1.119 2.0 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 1.831 2.5 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.6 _refine_ls_shell.d_res_low 2.72 _refine_ls_shell.number_reflns_R_work 375 _refine_ls_shell.R_factor_R_work 0.349 _refine_ls_shell.percent_reflns_obs 82 _refine_ls_shell.R_factor_R_free 0.31 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 13.3 _refine_ls_shell.number_reflns_R_free 59 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 ? TOPH19.SOL 'X-RAY DIFFRACTION' # _struct.entry_id 1BYW _struct.title 'STRUCTURE OF THE N-TERMINAL DOMAIN OF THE HUMAN-ERG POTASSIUM CHANNEL' _struct.pdbx_descriptor 'PROTEIN (HUMAN ERG POTASSIUM CHANNEL) MUTANT (R73C)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1BYW _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'PAS DOMAIN, POTASSIUM CHANNEL DOMAIN, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 21 ? CYS A 27 ? ASP A 46 CYS A 52 1 ? 7 HELX_P HELX_P2 2 ARG A 31 ? VAL A 34 ? ARG A 56 VAL A 59 1 ? 4 HELX_P HELX_P3 3 ASP A 42 ? LEU A 44 ? ASP A 67 LEU A 69 5 ? 3 HELX_P HELX_P4 4 ARG A 51 ? LEU A 62 ? ARG A 76 LEU A 87 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 16 ? CYS A 19 ? VAL A 41 CYS A 44 A 2 PHE A 4 ? ASN A 8 ? PHE A 29 ASN A 33 A 3 MET A 99 ? GLU A 109 ? MET A 124 GLU A 134 A 4 CYS A 80 ? VAL A 90 ? CYS A 105 VAL A 115 A 5 ARG A 67 ? TYR A 74 ? ARG A 92 TYR A 99 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 17 ? O ILE A 42 N ILE A 6 ? N ILE A 31 A 2 3 O ILE A 5 ? O ILE A 30 N LEU A 102 ? N LEU A 127 A 3 4 O MET A 99 ? O MET A 124 N VAL A 90 ? N VAL A 115 A 4 5 O PHE A 81 ? O PHE A 106 N PHE A 73 ? N PHE A 98 # _database_PDB_matrix.entry_id 1BYW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1BYW _atom_sites.fract_transf_matrix[1][1] 0.017825 _atom_sites.fract_transf_matrix[1][2] 0.010291 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020583 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007380 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 26 26 SER SER A . n A 1 2 ARG 2 27 27 ARG ARG A . n A 1 3 LYS 3 28 28 LYS LYS A . n A 1 4 PHE 4 29 29 PHE PHE A . n A 1 5 ILE 5 30 30 ILE ILE A . n A 1 6 ILE 6 31 31 ILE ILE A . n A 1 7 ALA 7 32 32 ALA ALA A . n A 1 8 ASN 8 33 33 ASN ASN A . n A 1 9 ALA 9 34 34 ALA ALA A . n A 1 10 ARG 10 35 35 ARG ARG A . n A 1 11 VAL 11 36 36 VAL VAL A . n A 1 12 GLU 12 37 37 GLU GLU A . n A 1 13 ASN 13 38 38 ASN ASN A . n A 1 14 CYS 14 39 39 CYS CYS A . n A 1 15 ALA 15 40 40 ALA ALA A . n A 1 16 VAL 16 41 41 VAL VAL A . n A 1 17 ILE 17 42 42 ILE ILE A . n A 1 18 TYR 18 43 43 TYR TYR A . n A 1 19 CYS 19 44 44 CYS CYS A . n A 1 20 ASN 20 45 45 ASN ASN A . n A 1 21 ASP 21 46 46 ASP ASP A . n A 1 22 GLY 22 47 47 GLY GLY A . n A 1 23 PHE 23 48 48 PHE PHE A . n A 1 24 CYS 24 49 49 CYS CYS A . n A 1 25 GLU 25 50 50 GLU GLU A . n A 1 26 LEU 26 51 51 LEU LEU A . n A 1 27 CYS 27 52 52 CYS CYS A . n A 1 28 GLY 28 53 53 GLY GLY A . n A 1 29 TYR 29 54 54 TYR TYR A . n A 1 30 SER 30 55 55 SER SER A . n A 1 31 ARG 31 56 56 ARG ARG A . n A 1 32 ALA 32 57 57 ALA ALA A . n A 1 33 GLU 33 58 58 GLU GLU A . n A 1 34 VAL 34 59 59 VAL VAL A . n A 1 35 MET 35 60 60 MET MET A . n A 1 36 GLN 36 61 61 GLN GLN A . n A 1 37 ARG 37 62 62 ARG ARG A . n A 1 38 PRO 38 63 63 PRO PRO A . n A 1 39 CYS 39 64 64 CYS CYS A . n A 1 40 THR 40 65 65 THR THR A . n A 1 41 CYS 41 66 66 CYS CYS A . n A 1 42 ASP 42 67 67 ASP ASP A . n A 1 43 PHE 43 68 68 PHE PHE A . n A 1 44 LEU 44 69 69 LEU LEU A . n A 1 45 HIS 45 70 70 HIS HIS A . n A 1 46 GLY 46 71 71 GLY GLY A . n A 1 47 PRO 47 72 72 PRO PRO A . n A 1 48 CYS 48 73 73 CYS CYS A . n A 1 49 THR 49 74 74 THR THR A . n A 1 50 GLN 50 75 75 GLN GLN A . n A 1 51 ARG 51 76 76 ARG ARG A . n A 1 52 ARG 52 77 77 ARG ARG A . n A 1 53 ALA 53 78 78 ALA ALA A . n A 1 54 ALA 54 79 79 ALA ALA A . n A 1 55 ALA 55 80 80 ALA ALA A . n A 1 56 GLN 56 81 81 GLN GLN A . n A 1 57 ILE 57 82 82 ILE ILE A . n A 1 58 ALA 58 83 83 ALA ALA A . n A 1 59 GLN 59 84 84 GLN GLN A . n A 1 60 ALA 60 85 85 ALA ALA A . n A 1 61 LEU 61 86 86 LEU LEU A . n A 1 62 LEU 62 87 87 LEU LEU A . n A 1 63 GLY 63 88 88 GLY GLY A . n A 1 64 ALA 64 89 89 ALA ALA A . n A 1 65 GLU 65 90 90 GLU GLU A . n A 1 66 GLU 66 91 91 GLU GLU A . n A 1 67 ARG 67 92 92 ARG ARG A . n A 1 68 LYS 68 93 93 LYS LYS A . n A 1 69 VAL 69 94 94 VAL VAL A . n A 1 70 GLU 70 95 95 GLU GLU A . n A 1 71 ILE 71 96 96 ILE ILE A . n A 1 72 ALA 72 97 97 ALA ALA A . n A 1 73 PHE 73 98 98 PHE PHE A . n A 1 74 TYR 74 99 99 TYR TYR A . n A 1 75 ARG 75 100 100 ARG ARG A . n A 1 76 LYS 76 101 101 LYS LYS A . n A 1 77 ASP 77 102 102 ASP ASP A . n A 1 78 GLY 78 103 103 GLY GLY A . n A 1 79 SER 79 104 104 SER SER A . n A 1 80 CYS 80 105 105 CYS CYS A . n A 1 81 PHE 81 106 106 PHE PHE A . n A 1 82 LEU 82 107 107 LEU LEU A . n A 1 83 CYS 83 108 108 CYS CYS A . n A 1 84 LEU 84 109 109 LEU LEU A . n A 1 85 VAL 85 110 110 VAL VAL A . n A 1 86 ASP 86 111 111 ASP ASP A . n A 1 87 VAL 87 112 112 VAL VAL A . n A 1 88 VAL 88 113 113 VAL VAL A . n A 1 89 PRO 89 114 114 PRO PRO A . n A 1 90 VAL 90 115 115 VAL VAL A . n A 1 91 LYS 91 116 116 LYS LYS A . n A 1 92 ASN 92 117 117 ASN ASN A . n A 1 93 GLU 93 118 118 GLU GLU A . n A 1 94 ASP 94 119 119 ASP ASP A . n A 1 95 GLY 95 120 120 GLY GLY A . n A 1 96 ALA 96 121 121 ALA ALA A . n A 1 97 VAL 97 122 122 VAL VAL A . n A 1 98 ILE 98 123 123 ILE ILE A . n A 1 99 MET 99 124 124 MET MET A . n A 1 100 PHE 100 125 125 PHE PHE A . n A 1 101 ILE 101 126 126 ILE ILE A . n A 1 102 LEU 102 127 127 LEU LEU A . n A 1 103 ASN 103 128 128 ASN ASN A . n A 1 104 PHE 104 129 129 PHE PHE A . n A 1 105 GLU 105 130 130 GLU GLU A . n A 1 106 VAL 106 131 131 VAL VAL A . n A 1 107 VAL 107 132 132 VAL VAL A . n A 1 108 MET 108 133 133 MET MET A . n A 1 109 GLU 109 134 134 GLU GLU A . n A 1 110 LYS 110 135 135 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 200 200 HOH HOH A . B 2 HOH 2 201 201 HOH HOH A . B 2 HOH 3 202 202 HOH HOH A . B 2 HOH 4 203 203 HOH HOH A . B 2 HOH 5 204 204 HOH HOH A . B 2 HOH 6 205 205 HOH HOH A . B 2 HOH 7 206 206 HOH HOH A . B 2 HOH 8 207 207 HOH HOH A . B 2 HOH 9 208 208 HOH HOH A . B 2 HOH 10 209 209 HOH HOH A . B 2 HOH 11 210 210 HOH HOH A . B 2 HOH 12 211 211 HOH HOH A . B 2 HOH 13 212 212 HOH HOH A . B 2 HOH 14 213 213 HOH HOH A . B 2 HOH 15 214 214 HOH HOH A . B 2 HOH 16 215 215 HOH HOH A . B 2 HOH 17 216 216 HOH HOH A . B 2 HOH 18 217 217 HOH HOH A . B 2 HOH 19 218 218 HOH HOH A . B 2 HOH 20 219 219 HOH HOH A . B 2 HOH 21 220 220 HOH HOH A . B 2 HOH 22 221 221 HOH HOH A . B 2 HOH 23 222 222 HOH HOH A . B 2 HOH 24 223 223 HOH HOH A . B 2 HOH 25 224 224 HOH HOH A . B 2 HOH 26 225 225 HOH HOH A . B 2 HOH 27 226 226 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-12-16 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-03-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category struct_ref_seq_dif # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CCP4 'model building' . ? 3 X-PLOR refinement 3.851 ? 4 CCP4 phasing . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 35 ? ? -78.28 32.87 2 1 TYR A 43 ? ? -175.59 145.90 3 1 CYS A 64 ? ? -57.60 -4.03 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 26 ? CB ? A SER 1 CB 2 1 Y 1 A SER 26 ? OG ? A SER 1 OG 3 1 Y 1 A ARG 35 ? CD ? A ARG 10 CD 4 1 Y 1 A ARG 35 ? NE ? A ARG 10 NE 5 1 Y 1 A ARG 35 ? CZ ? A ARG 10 CZ 6 1 Y 1 A ARG 35 ? NH1 ? A ARG 10 NH1 7 1 Y 1 A ARG 35 ? NH2 ? A ARG 10 NH2 8 1 Y 1 A GLU 37 ? CG ? A GLU 12 CG 9 1 Y 1 A GLU 37 ? CD ? A GLU 12 CD 10 1 Y 1 A GLU 37 ? OE1 ? A GLU 12 OE1 11 1 Y 1 A GLU 37 ? OE2 ? A GLU 12 OE2 12 1 Y 1 A GLN 75 ? OE1 ? A GLN 50 OE1 13 1 Y 1 A GLN 75 ? NE2 ? A GLN 50 NE2 14 1 Y 1 A ARG 76 ? CG ? A ARG 51 CG 15 1 Y 1 A ARG 76 ? CD ? A ARG 51 CD 16 1 Y 1 A ARG 76 ? NE ? A ARG 51 NE 17 1 Y 1 A ARG 76 ? CZ ? A ARG 51 CZ 18 1 Y 1 A ARG 76 ? NH1 ? A ARG 51 NH1 19 1 Y 1 A ARG 76 ? NH2 ? A ARG 51 NH2 20 1 Y 1 A ARG 77 ? CG ? A ARG 52 CG 21 1 Y 1 A ARG 77 ? CD ? A ARG 52 CD 22 1 Y 1 A ARG 77 ? NE ? A ARG 52 NE 23 1 Y 1 A ARG 77 ? CZ ? A ARG 52 CZ 24 1 Y 1 A ARG 77 ? NH1 ? A ARG 52 NH1 25 1 Y 1 A ARG 77 ? NH2 ? A ARG 52 NH2 26 1 Y 1 A GLN 84 ? CG ? A GLN 59 CG 27 1 Y 1 A GLN 84 ? CD ? A GLN 59 CD 28 1 Y 1 A GLN 84 ? OE1 ? A GLN 59 OE1 29 1 Y 1 A GLN 84 ? NE2 ? A GLN 59 NE2 30 1 Y 1 A GLU 90 ? CG ? A GLU 65 CG 31 1 Y 1 A GLU 90 ? CD ? A GLU 65 CD 32 1 Y 1 A GLU 90 ? OE1 ? A GLU 65 OE1 33 1 Y 1 A GLU 90 ? OE2 ? A GLU 65 OE2 34 1 Y 1 A GLU 118 ? CG ? A GLU 93 CG 35 1 Y 1 A GLU 118 ? CD ? A GLU 93 CD 36 1 Y 1 A GLU 118 ? OE1 ? A GLU 93 OE1 37 1 Y 1 A GLU 118 ? OE2 ? A GLU 93 OE2 38 1 Y 1 A ASP 119 ? CB ? A ASP 94 CB 39 1 Y 1 A ASP 119 ? CG ? A ASP 94 CG 40 1 Y 1 A ASP 119 ? OD1 ? A ASP 94 OD1 41 1 Y 1 A ASP 119 ? OD2 ? A ASP 94 OD2 42 1 Y 1 A GLU 130 ? CD ? A GLU 105 CD 43 1 Y 1 A GLU 130 ? OE1 ? A GLU 105 OE1 44 1 Y 1 A GLU 130 ? OE2 ? A GLU 105 OE2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #