data_1D7P # _entry.id 1D7P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1D7P RCSB RCSB009867 WWPDB D_1000009867 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D7P _pdbx_database_status.recvd_initial_deposition_date 1999-10-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pratt, K.P.' 1 'Shen, B.W.' 2 'Stoddard, B.L.' 3 # _citation.id primary _citation.title 'Structure of the C2 domain of human factor VIII at 1.5 A resolution.' _citation.journal_abbrev Nature _citation.journal_volume 402 _citation.page_first 439 _citation.page_last 442 _citation.year 1999 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10586887 _citation.pdbx_database_id_DOI 10.1038/46601 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Pratt, K.P.' 1 primary 'Shen, B.W.' 2 primary 'Takeshima, K.' 3 primary 'Davie, E.W.' 4 primary 'Fujikawa, K.' 5 primary 'Stoddard, B.L.' 6 # _cell.entry_id 1D7P _cell.length_a 46.440 _cell.length_b 56.410 _cell.length_c 65.740 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1D7P _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'COAGULATION FACTOR VIII PRECURSOR' 18058.664 1 ? S2296C C2-DOMAIN ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn CYSTEINE 121.158 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 5 water nat water 18.015 247 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;LNSCSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKS LLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNCLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQ ; _entity_poly.pdbx_seq_one_letter_code_can ;LNSCSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKS LLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNCLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQ ; _entity_poly.pdbx_strand_id M _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 ASN n 1 3 SER n 1 4 CYS n 1 5 SER n 1 6 MET n 1 7 PRO n 1 8 LEU n 1 9 GLY n 1 10 MET n 1 11 GLU n 1 12 SER n 1 13 LYS n 1 14 ALA n 1 15 ILE n 1 16 SER n 1 17 ASP n 1 18 ALA n 1 19 GLN n 1 20 ILE n 1 21 THR n 1 22 ALA n 1 23 SER n 1 24 SER n 1 25 TYR n 1 26 PHE n 1 27 THR n 1 28 ASN n 1 29 MET n 1 30 PHE n 1 31 ALA n 1 32 THR n 1 33 TRP n 1 34 SER n 1 35 PRO n 1 36 SER n 1 37 LYS n 1 38 ALA n 1 39 ARG n 1 40 LEU n 1 41 HIS n 1 42 LEU n 1 43 GLN n 1 44 GLY n 1 45 ARG n 1 46 SER n 1 47 ASN n 1 48 ALA n 1 49 TRP n 1 50 ARG n 1 51 PRO n 1 52 GLN n 1 53 VAL n 1 54 ASN n 1 55 ASN n 1 56 PRO n 1 57 LYS n 1 58 GLU n 1 59 TRP n 1 60 LEU n 1 61 GLN n 1 62 VAL n 1 63 ASP n 1 64 PHE n 1 65 GLN n 1 66 LYS n 1 67 THR n 1 68 MET n 1 69 LYS n 1 70 VAL n 1 71 THR n 1 72 GLY n 1 73 VAL n 1 74 THR n 1 75 THR n 1 76 GLN n 1 77 GLY n 1 78 VAL n 1 79 LYS n 1 80 SER n 1 81 LEU n 1 82 LEU n 1 83 THR n 1 84 SER n 1 85 MET n 1 86 TYR n 1 87 VAL n 1 88 LYS n 1 89 GLU n 1 90 PHE n 1 91 LEU n 1 92 ILE n 1 93 SER n 1 94 SER n 1 95 SER n 1 96 GLN n 1 97 ASP n 1 98 GLY n 1 99 HIS n 1 100 GLN n 1 101 TRP n 1 102 THR n 1 103 LEU n 1 104 PHE n 1 105 PHE n 1 106 GLN n 1 107 ASN n 1 108 GLY n 1 109 LYS n 1 110 VAL n 1 111 LYS n 1 112 VAL n 1 113 PHE n 1 114 GLN n 1 115 GLY n 1 116 ASN n 1 117 GLN n 1 118 ASP n 1 119 SER n 1 120 PHE n 1 121 THR n 1 122 PRO n 1 123 VAL n 1 124 VAL n 1 125 ASN n 1 126 CYS n 1 127 LEU n 1 128 ASP n 1 129 PRO n 1 130 PRO n 1 131 LEU n 1 132 LEU n 1 133 THR n 1 134 ARG n 1 135 TYR n 1 136 LEU n 1 137 ARG n 1 138 ILE n 1 139 HIS n 1 140 PRO n 1 141 GLN n 1 142 SER n 1 143 TRP n 1 144 VAL n 1 145 HIS n 1 146 GLN n 1 147 ILE n 1 148 ALA n 1 149 LEU n 1 150 ARG n 1 151 MET n 1 152 GLU n 1 153 VAL n 1 154 LEU n 1 155 GLY n 1 156 CYS n 1 157 GLU n 1 158 ALA n 1 159 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue BLOOD _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ;baker's yeast ; _entity_src_gen.pdbx_host_org_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4932 _entity_src_gen.host_org_genus Saccharomyces _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FA8_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00451 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1D7P _struct_ref_seq.pdbx_strand_id M _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 159 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00451 _struct_ref_seq.db_align_beg 2190 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2348 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2171 _struct_ref_seq.pdbx_auth_seq_align_end 2329 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1D7P _struct_ref_seq_dif.mon_id CYS _struct_ref_seq_dif.pdbx_pdb_strand_id M _struct_ref_seq_dif.seq_num 126 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00451 _struct_ref_seq_dif.db_mon_id SER _struct_ref_seq_dif.pdbx_seq_db_seq_num 2315 _struct_ref_seq_dif.details ENGINEERED _struct_ref_seq_dif.pdbx_auth_seq_num 2296 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1D7P _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 3 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'AMMONIUM SULFATE, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 150 ? 1 2 150 ? 1 3 150 ? 1 4 150 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' 'RIGAKU RAXIS' 1998-11-22 ? 2 'IMAGE PLATE' 'RIGAKU RAXIS' 1998-11-23 ? 3 CCD ADSC 1999-01-01 ? 4 CCD OTHER 1999-01-01 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 1 M ? 'SINGLE WAVELENGTH' x-ray 3 1 M ? 'SINGLE WAVELENGTH' x-ray 4 1 M ? 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.5418 1.0 2 1.0721 1.0 3 1.0085 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 'ROTATING ANODE' 'RIGAKU RU200' ? ? 1.5418 1.5418 2 'ROTATING ANODE' 'RIGAKU RU200' ? ? 1.5418 1.5418 3 SYNCHROTRON 'ALS BEAMLINE 5.0.2' ALS 5.0.2 1.0721 1.0721 4 SYNCHROTRON 'NSLS BEAMLINE X25' NSLS X25 1.0085 1.0085 # _reflns.entry_id 1D7P _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.5 _reflns.number_obs 27327 _reflns.number_all 28338 _reflns.percent_possible_obs 96 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.7 _reflns.B_iso_Wilson_estimate 14.5 _reflns.pdbx_redundancy 4.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2,3,4 # _reflns_shell.d_res_high 1.5 _reflns_shell.d_res_low 1.53 _reflns_shell.percent_possible_all 93.9 _reflns_shell.Rmerge_I_obs 0.188 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2,3,4 # _refine.entry_id 1D7P _refine.ls_number_reflns_obs 27232 _refine.ls_number_reflns_all 27232 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50 _refine.ls_d_res_high 1.5 _refine.ls_percent_reflns_obs 96 _refine.ls_R_factor_obs 0.206 _refine.ls_R_factor_all 0.206 _refine.ls_R_factor_R_work 0.205 _refine.ls_R_factor_R_free 0.215 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1362 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1,2,3,4 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1268 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 247 _refine_hist.number_atoms_total 1538 _refine_hist.d_res_high 1.5 _refine_hist.d_res_low 50 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.47 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1D7P _struct.title 'Crystal structure of the c2 domain of human factor viii at 1.5 a resolution at 1.5 A' _struct.pdbx_descriptor 'COAGULATION FACTOR VIII PRECURSOR' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D7P _struct_keywords.pdbx_keywords 'BLOOD CLOTTING' _struct_keywords.text 'BETA SANDWICH, BLOOD CLOTTING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 16 ? ALA A 18 ? SER M 2186 ALA M 2188 5 ? 3 HELX_P HELX_P2 2 SER A 34 ? ALA A 38 ? SER M 2204 ALA M 2208 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 156 SG ? ? M CYS 2174 M CYS 2326 1_555 ? ? ? ? ? ? ? 2.507 ? covale1 covale ? ? A CYS 126 SG ? ? ? 1_555 D CYS . SG ? ? M CYS 2296 M CYS 2330 1_555 ? ? ? ? ? ? ? 2.034 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 128 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 2298 _struct_mon_prot_cis.auth_asym_id M _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 129 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 2299 _struct_mon_prot_cis.pdbx_auth_asym_id_2 M _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.27 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id B 1 PHE A 26 ? ASN A 28 ? PHE M 2196 ASN M 2198 B 2 ALA A 31 ? TRP A 33 ? ALA M 2201 TRP M 2203 C 1 PHE A 105 ? GLN A 106 ? PHE M 2275 GLN M 2276 C 2 LYS A 109 ? VAL A 110 ? LYS M 2279 VAL M 2280 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id B 1 2 N ASN A 28 ? N ASN M 2198 O ALA A 31 ? O ALA M 2201 C 1 2 N GLN A 106 ? N GLN M 2276 O LYS A 109 ? O LYS M 2279 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE SO4 M 2332' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 M 2333' AC3 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE CYS M 2330' AC4 Software ? ? ? ? 9 'BINDING SITE FOR RESIDUE GOL M 2331' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 HOH F . ? HOH M 31 . ? 1_555 ? 2 AC1 8 HOH F . ? HOH M 40 . ? 1_555 ? 3 AC1 8 HOH F . ? HOH M 118 . ? 1_555 ? 4 AC1 8 HIS A 41 ? HIS M 2211 . ? 1_555 ? 5 AC1 8 GLN A 43 ? GLN M 2213 . ? 1_555 ? 6 AC1 8 GLN A 76 ? GLN M 2246 . ? 1_555 ? 7 AC1 8 PHE A 120 ? PHE M 2290 . ? 1_555 ? 8 AC1 8 ARG A 150 ? ARG M 2320 . ? 1_555 ? 9 AC2 5 HOH F . ? HOH M 140 . ? 1_555 ? 10 AC2 5 VAL A 53 ? VAL M 2223 . ? 3_645 ? 11 AC2 5 ASN A 54 ? ASN M 2224 . ? 3_645 ? 12 AC2 5 ASN A 107 ? ASN M 2277 . ? 1_555 ? 13 AC2 5 LYS A 109 ? LYS M 2279 . ? 1_555 ? 14 AC3 9 HOH F . ? HOH M 111 . ? 1_555 ? 15 AC3 9 ASN A 2 ? ASN M 2172 . ? 1_555 ? 16 AC3 9 SER A 5 ? SER M 2175 . ? 1_555 ? 17 AC3 9 THR A 71 ? THR M 2241 . ? 1_555 ? 18 AC3 9 GLN A 100 ? GLN M 2270 . ? 4_555 ? 19 AC3 9 TRP A 101 ? TRP M 2271 . ? 4_555 ? 20 AC3 9 THR A 102 ? THR M 2272 . ? 4_555 ? 21 AC3 9 VAL A 124 ? VAL M 2294 . ? 1_555 ? 22 AC3 9 CYS A 126 ? CYS M 2296 . ? 1_555 ? 23 AC4 9 HOH F . ? HOH M 73 . ? 1_555 ? 24 AC4 9 HOH F . ? HOH M 80 . ? 1_555 ? 25 AC4 9 HOH F . ? HOH M 412 . ? 1_555 ? 26 AC4 9 MET A 6 ? MET M 2176 . ? 2_665 ? 27 AC4 9 ALA A 31 ? ALA M 2201 . ? 1_555 ? 28 AC4 9 TRP A 33 ? TRP M 2203 . ? 1_555 ? 29 AC4 9 ARG A 50 ? ARG M 2220 . ? 1_555 ? 30 AC4 9 SER A 80 ? SER M 2250 . ? 1_555 ? 31 AC4 9 GLY A 108 ? GLY M 2278 . ? 3_655 ? # _database_PDB_matrix.entry_id 1D7P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1D7P _atom_sites.fract_transf_matrix[1][1] 0.021533 _atom_sites.fract_transf_matrix[1][2] -0.000001 _atom_sites.fract_transf_matrix[1][3] -0.000001 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017727 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015211 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 2171 2171 LEU LEU M . n A 1 2 ASN 2 2172 2172 ASN ASN M . n A 1 3 SER 3 2173 2173 SER SER M . n A 1 4 CYS 4 2174 2174 CYS CYS M . n A 1 5 SER 5 2175 2175 SER SER M . n A 1 6 MET 6 2176 2176 MET MET M . n A 1 7 PRO 7 2177 2177 PRO PRO M . n A 1 8 LEU 8 2178 2178 LEU LEU M . n A 1 9 GLY 9 2179 2179 GLY GLY M . n A 1 10 MET 10 2180 2180 MET MET M . n A 1 11 GLU 11 2181 2181 GLU GLU M . n A 1 12 SER 12 2182 2182 SER SER M . n A 1 13 LYS 13 2183 2183 LYS LYS M . n A 1 14 ALA 14 2184 2184 ALA ALA M . n A 1 15 ILE 15 2185 2185 ILE ILE M . n A 1 16 SER 16 2186 2186 SER SER M . n A 1 17 ASP 17 2187 2187 ASP ASP M . n A 1 18 ALA 18 2188 2188 ALA ALA M . n A 1 19 GLN 19 2189 2189 GLN GLN M . n A 1 20 ILE 20 2190 2190 ILE ILE M . n A 1 21 THR 21 2191 2191 THR THR M . n A 1 22 ALA 22 2192 2192 ALA ALA M . n A 1 23 SER 23 2193 2193 SER SER M . n A 1 24 SER 24 2194 2194 SER SER M . n A 1 25 TYR 25 2195 2195 TYR TYR M . n A 1 26 PHE 26 2196 2196 PHE PHE M . n A 1 27 THR 27 2197 2197 THR THR M . n A 1 28 ASN 28 2198 2198 ASN ASN M . n A 1 29 MET 29 2199 2199 MET MET M . n A 1 30 PHE 30 2200 2200 PHE PHE M . n A 1 31 ALA 31 2201 2201 ALA ALA M . n A 1 32 THR 32 2202 2202 THR THR M . n A 1 33 TRP 33 2203 2203 TRP TRP M . n A 1 34 SER 34 2204 2204 SER SER M . n A 1 35 PRO 35 2205 2205 PRO PRO M . n A 1 36 SER 36 2206 2206 SER SER M . n A 1 37 LYS 37 2207 2207 LYS LYS M . n A 1 38 ALA 38 2208 2208 ALA ALA M . n A 1 39 ARG 39 2209 2209 ARG ARG M . n A 1 40 LEU 40 2210 2210 LEU LEU M . n A 1 41 HIS 41 2211 2211 HIS HIS M . n A 1 42 LEU 42 2212 2212 LEU LEU M . n A 1 43 GLN 43 2213 2213 GLN GLN M . n A 1 44 GLY 44 2214 2214 GLY GLY M . n A 1 45 ARG 45 2215 2215 ARG ARG M . n A 1 46 SER 46 2216 2216 SER SER M . n A 1 47 ASN 47 2217 2217 ASN ASN M . n A 1 48 ALA 48 2218 2218 ALA ALA M . n A 1 49 TRP 49 2219 2219 TRP TRP M . n A 1 50 ARG 50 2220 2220 ARG ARG M . n A 1 51 PRO 51 2221 2221 PRO PRO M . n A 1 52 GLN 52 2222 2222 GLN GLN M . n A 1 53 VAL 53 2223 2223 VAL VAL M . n A 1 54 ASN 54 2224 2224 ASN ASN M . n A 1 55 ASN 55 2225 2225 ASN ASN M . n A 1 56 PRO 56 2226 2226 PRO PRO M . n A 1 57 LYS 57 2227 2227 LYS LYS M . n A 1 58 GLU 58 2228 2228 GLU GLU M . n A 1 59 TRP 59 2229 2229 TRP TRP M . n A 1 60 LEU 60 2230 2230 LEU LEU M . n A 1 61 GLN 61 2231 2231 GLN GLN M . n A 1 62 VAL 62 2232 2232 VAL VAL M . n A 1 63 ASP 63 2233 2233 ASP ASP M . n A 1 64 PHE 64 2234 2234 PHE PHE M . n A 1 65 GLN 65 2235 2235 GLN GLN M . n A 1 66 LYS 66 2236 2236 LYS LYS M . n A 1 67 THR 67 2237 2237 THR THR M . n A 1 68 MET 68 2238 2238 MET MET M . n A 1 69 LYS 69 2239 2239 LYS LYS M . n A 1 70 VAL 70 2240 2240 VAL VAL M . n A 1 71 THR 71 2241 2241 THR THR M . n A 1 72 GLY 72 2242 2242 GLY GLY M . n A 1 73 VAL 73 2243 2243 VAL VAL M . n A 1 74 THR 74 2244 2244 THR THR M . n A 1 75 THR 75 2245 2245 THR THR M . n A 1 76 GLN 76 2246 2246 GLN GLN M . n A 1 77 GLY 77 2247 2247 GLY GLY M . n A 1 78 VAL 78 2248 2248 VAL VAL M . n A 1 79 LYS 79 2249 2249 LYS LYS M . n A 1 80 SER 80 2250 2250 SER SER M . n A 1 81 LEU 81 2251 2251 LEU LEU M . n A 1 82 LEU 82 2252 2252 LEU LEU M . n A 1 83 THR 83 2253 2253 THR THR M . n A 1 84 SER 84 2254 2254 SER SER M . n A 1 85 MET 85 2255 2255 MET MET M . n A 1 86 TYR 86 2256 2256 TYR TYR M . n A 1 87 VAL 87 2257 2257 VAL VAL M . n A 1 88 LYS 88 2258 2258 LYS LYS M . n A 1 89 GLU 89 2259 2259 GLU GLU M . n A 1 90 PHE 90 2260 2260 PHE PHE M . n A 1 91 LEU 91 2261 2261 LEU LEU M . n A 1 92 ILE 92 2262 2262 ILE ILE M . n A 1 93 SER 93 2263 2263 SER SER M . n A 1 94 SER 94 2264 2264 SER SER M . n A 1 95 SER 95 2265 2265 SER SER M . n A 1 96 GLN 96 2266 2266 GLN GLN M . n A 1 97 ASP 97 2267 2267 ASP ASP M . n A 1 98 GLY 98 2268 2268 GLY GLY M . n A 1 99 HIS 99 2269 2269 HIS HIS M . n A 1 100 GLN 100 2270 2270 GLN GLN M . n A 1 101 TRP 101 2271 2271 TRP TRP M . n A 1 102 THR 102 2272 2272 THR THR M . n A 1 103 LEU 103 2273 2273 LEU LEU M . n A 1 104 PHE 104 2274 2274 PHE PHE M . n A 1 105 PHE 105 2275 2275 PHE PHE M . n A 1 106 GLN 106 2276 2276 GLN GLN M . n A 1 107 ASN 107 2277 2277 ASN ASN M . n A 1 108 GLY 108 2278 2278 GLY GLY M . n A 1 109 LYS 109 2279 2279 LYS LYS M . n A 1 110 VAL 110 2280 2280 VAL VAL M . n A 1 111 LYS 111 2281 2281 LYS LYS M . n A 1 112 VAL 112 2282 2282 VAL VAL M . n A 1 113 PHE 113 2283 2283 PHE PHE M . n A 1 114 GLN 114 2284 2284 GLN GLN M . n A 1 115 GLY 115 2285 2285 GLY GLY M . n A 1 116 ASN 116 2286 2286 ASN ASN M . n A 1 117 GLN 117 2287 2287 GLN GLN M . n A 1 118 ASP 118 2288 2288 ASP ASP M . n A 1 119 SER 119 2289 2289 SER SER M . n A 1 120 PHE 120 2290 2290 PHE PHE M . n A 1 121 THR 121 2291 2291 THR THR M . n A 1 122 PRO 122 2292 2292 PRO PRO M . n A 1 123 VAL 123 2293 2293 VAL VAL M . n A 1 124 VAL 124 2294 2294 VAL VAL M . n A 1 125 ASN 125 2295 2295 ASN ASN M . n A 1 126 CYS 126 2296 2296 CYS CYS M . n A 1 127 LEU 127 2297 2297 LEU LEU M . n A 1 128 ASP 128 2298 2298 ASP ASP M . n A 1 129 PRO 129 2299 2299 PRO PRO M . n A 1 130 PRO 130 2300 2300 PRO PRO M . n A 1 131 LEU 131 2301 2301 LEU LEU M . n A 1 132 LEU 132 2302 2302 LEU LEU M . n A 1 133 THR 133 2303 2303 THR THR M . n A 1 134 ARG 134 2304 2304 ARG ARG M . n A 1 135 TYR 135 2305 2305 TYR TYR M . n A 1 136 LEU 136 2306 2306 LEU LEU M . n A 1 137 ARG 137 2307 2307 ARG ARG M . n A 1 138 ILE 138 2308 2308 ILE ILE M . n A 1 139 HIS 139 2309 2309 HIS HIS M . n A 1 140 PRO 140 2310 2310 PRO PRO M . n A 1 141 GLN 141 2311 2311 GLN GLN M . n A 1 142 SER 142 2312 2312 SER SER M . n A 1 143 TRP 143 2313 2313 TRP TRP M . n A 1 144 VAL 144 2314 2314 VAL VAL M . n A 1 145 HIS 145 2315 2315 HIS HIS M . n A 1 146 GLN 146 2316 2316 GLN GLN M . n A 1 147 ILE 147 2317 2317 ILE ILE M . n A 1 148 ALA 148 2318 2318 ALA ALA M . n A 1 149 LEU 149 2319 2319 LEU LEU M . n A 1 150 ARG 150 2320 2320 ARG ARG M . n A 1 151 MET 151 2321 2321 MET MET M . n A 1 152 GLU 152 2322 2322 GLU GLU M . n A 1 153 VAL 153 2323 2323 VAL VAL M . n A 1 154 LEU 154 2324 2324 LEU LEU M . n A 1 155 GLY 155 2325 2325 GLY GLY M . n A 1 156 CYS 156 2326 2326 CYS CYS M . n A 1 157 GLU 157 2327 2327 GLU GLU M . n A 1 158 ALA 158 2328 2328 ALA ALA M . n A 1 159 GLN 159 2329 2329 GLN GLN M . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-12-01 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 SHARP phasing . ? 3 CNS refinement . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O M HOH 139 ? ? O M HOH 423 ? ? 0.16 2 1 O M HOH 41 ? ? O M HOH 419 ? ? 0.55 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 M _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 129 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 M _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 201 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_664 _pdbx_validate_symm_contact.dist 0.44 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE M ARG 2215 ? ? CZ M ARG 2215 ? ? NH2 M ARG 2215 ? ? 123.82 120.30 3.52 0.50 N 2 1 NE M ARG 2220 ? ? CZ M ARG 2220 ? ? NH2 M ARG 2220 ? ? 123.71 120.30 3.41 0.50 N 3 1 NE M ARG 2304 ? ? CZ M ARG 2304 ? ? NH2 M ARG 2304 ? ? 123.45 120.30 3.15 0.50 N 4 1 NE M ARG 2307 ? ? CZ M ARG 2307 ? ? NH2 M ARG 2307 ? ? 123.51 120.30 3.21 0.50 N 5 1 NE M ARG 2320 ? ? CZ M ARG 2320 ? ? NH2 M ARG 2320 ? ? 123.64 120.30 3.34 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER M 2175 ? ? -161.95 43.25 2 1 LYS M 2183 ? ? 81.00 16.01 3 1 SER M 2206 ? ? -69.69 1.47 4 1 ALA M 2208 ? ? -77.52 49.60 5 1 PRO M 2226 ? ? -67.24 0.80 6 1 LEU M 2251 ? ? 61.20 -117.83 7 1 HIS M 2315 ? ? 70.32 -61.64 8 1 CYS M 2326 ? ? -161.17 -169.20 9 1 ALA M 2328 ? ? -116.92 -137.97 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 CYSTEINE CYS 4 GLYCEROL GOL 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 2332 2 SO4 SO4 M . C 2 SO4 1 2333 3 SO4 SO4 M . D 3 CYS 1 2330 1 CYS CYS M . E 4 GOL 1 2331 1 GOL CRY M . F 5 HOH 1 1 1 HOH TIP M . F 5 HOH 2 2 2 HOH TIP M . F 5 HOH 3 4 4 HOH TIP M . F 5 HOH 4 5 5 HOH TIP M . F 5 HOH 5 6 6 HOH TIP M . F 5 HOH 6 7 7 HOH TIP M . F 5 HOH 7 8 8 HOH TIP M . F 5 HOH 8 9 9 HOH TIP M . F 5 HOH 9 10 10 HOH TIP M . F 5 HOH 10 11 11 HOH TIP M . F 5 HOH 11 12 12 HOH TIP M . F 5 HOH 12 13 13 HOH TIP M . F 5 HOH 13 14 14 HOH TIP M . F 5 HOH 14 15 15 HOH TIP M . F 5 HOH 15 16 16 HOH TIP M . F 5 HOH 16 17 17 HOH TIP M . F 5 HOH 17 18 18 HOH TIP M . F 5 HOH 18 19 19 HOH TIP M . F 5 HOH 19 20 20 HOH TIP M . F 5 HOH 20 21 21 HOH TIP M . F 5 HOH 21 22 22 HOH TIP M . F 5 HOH 22 23 23 HOH TIP M . F 5 HOH 23 24 24 HOH TIP M . F 5 HOH 24 25 25 HOH TIP M . F 5 HOH 25 26 26 HOH TIP M . F 5 HOH 26 27 27 HOH TIP M . F 5 HOH 27 28 28 HOH TIP M . F 5 HOH 28 29 29 HOH TIP M . F 5 HOH 29 30 30 HOH TIP M . F 5 HOH 30 31 31 HOH TIP M . F 5 HOH 31 32 32 HOH TIP M . F 5 HOH 32 33 33 HOH TIP M . F 5 HOH 33 34 34 HOH TIP M . F 5 HOH 34 35 35 HOH TIP M . F 5 HOH 35 36 36 HOH TIP M . F 5 HOH 36 37 37 HOH TIP M . F 5 HOH 37 38 38 HOH TIP M . F 5 HOH 38 39 39 HOH TIP M . F 5 HOH 39 40 40 HOH TIP M . F 5 HOH 40 41 41 HOH TIP M . F 5 HOH 41 42 42 HOH TIP M . F 5 HOH 42 43 43 HOH TIP M . F 5 HOH 43 44 44 HOH TIP M . F 5 HOH 44 45 45 HOH TIP M . F 5 HOH 45 46 46 HOH TIP M . F 5 HOH 46 47 47 HOH TIP M . F 5 HOH 47 48 48 HOH TIP M . F 5 HOH 48 50 50 HOH TIP M . F 5 HOH 49 51 51 HOH TIP M . F 5 HOH 50 52 52 HOH TIP M . F 5 HOH 51 53 53 HOH TIP M . F 5 HOH 52 54 54 HOH TIP M . F 5 HOH 53 55 55 HOH TIP M . F 5 HOH 54 57 57 HOH TIP M . F 5 HOH 55 58 58 HOH TIP M . F 5 HOH 56 59 59 HOH TIP M . F 5 HOH 57 60 60 HOH TIP M . F 5 HOH 58 61 61 HOH TIP M . F 5 HOH 59 62 62 HOH TIP M . F 5 HOH 60 64 64 HOH TIP M . F 5 HOH 61 65 65 HOH TIP M . F 5 HOH 62 66 66 HOH TIP M . F 5 HOH 63 67 67 HOH TIP M . F 5 HOH 64 68 68 HOH TIP M . F 5 HOH 65 69 69 HOH TIP M . F 5 HOH 66 70 70 HOH TIP M . F 5 HOH 67 71 71 HOH TIP M . F 5 HOH 68 72 72 HOH TIP M . F 5 HOH 69 73 73 HOH TIP M . F 5 HOH 70 74 74 HOH TIP M . F 5 HOH 71 75 75 HOH TIP M . F 5 HOH 72 76 76 HOH TIP M . F 5 HOH 73 79 79 HOH TIP M . F 5 HOH 74 80 80 HOH TIP M . F 5 HOH 75 82 82 HOH TIP M . F 5 HOH 76 83 83 HOH TIP M . F 5 HOH 77 86 86 HOH TIP M . F 5 HOH 78 87 87 HOH TIP M . F 5 HOH 79 88 88 HOH TIP M . F 5 HOH 80 89 89 HOH TIP M . F 5 HOH 81 90 90 HOH TIP M . F 5 HOH 82 93 93 HOH TIP M . F 5 HOH 83 94 94 HOH TIP M . F 5 HOH 84 97 97 HOH TIP M . F 5 HOH 85 98 98 HOH TIP M . F 5 HOH 86 99 99 HOH TIP M . F 5 HOH 87 100 100 HOH TIP M . F 5 HOH 88 102 102 HOH TIP M . F 5 HOH 89 103 103 HOH TIP M . F 5 HOH 90 105 105 HOH TIP M . F 5 HOH 91 107 107 HOH TIP M . F 5 HOH 92 108 108 HOH TIP M . F 5 HOH 93 109 109 HOH TIP M . F 5 HOH 94 110 110 HOH TIP M . F 5 HOH 95 111 111 HOH TIP M . F 5 HOH 96 113 113 HOH TIP M . F 5 HOH 97 114 114 HOH TIP M . F 5 HOH 98 115 115 HOH TIP M . F 5 HOH 99 116 116 HOH TIP M . F 5 HOH 100 117 117 HOH TIP M . F 5 HOH 101 118 118 HOH TIP M . F 5 HOH 102 119 119 HOH TIP M . F 5 HOH 103 122 122 HOH TIP M . F 5 HOH 104 124 124 HOH TIP M . F 5 HOH 105 125 125 HOH TIP M . F 5 HOH 106 126 126 HOH TIP M . F 5 HOH 107 127 127 HOH TIP M . F 5 HOH 108 128 128 HOH TIP M . F 5 HOH 109 129 129 HOH TIP M . F 5 HOH 110 130 130 HOH TIP M . F 5 HOH 111 133 133 HOH TIP M . F 5 HOH 112 136 136 HOH TIP M . F 5 HOH 113 138 138 HOH TIP M . F 5 HOH 114 139 139 HOH TIP M . F 5 HOH 115 140 140 HOH TIP M . F 5 HOH 116 141 141 HOH TIP M . F 5 HOH 117 142 142 HOH TIP M . F 5 HOH 118 143 143 HOH TIP M . F 5 HOH 119 144 144 HOH TIP M . F 5 HOH 120 145 145 HOH TIP M . F 5 HOH 121 147 147 HOH TIP M . F 5 HOH 122 148 148 HOH TIP M . F 5 HOH 123 149 149 HOH TIP M . F 5 HOH 124 150 150 HOH TIP M . F 5 HOH 125 152 152 HOH TIP M . F 5 HOH 126 153 153 HOH TIP M . F 5 HOH 127 154 154 HOH TIP M . F 5 HOH 128 157 157 HOH TIP M . F 5 HOH 129 160 160 HOH TIP M . F 5 HOH 130 161 161 HOH TIP M . F 5 HOH 131 163 163 HOH TIP M . F 5 HOH 132 164 164 HOH TIP M . F 5 HOH 133 165 165 HOH TIP M . F 5 HOH 134 166 166 HOH TIP M . F 5 HOH 135 167 167 HOH TIP M . F 5 HOH 136 169 169 HOH TIP M . F 5 HOH 137 170 170 HOH TIP M . F 5 HOH 138 173 173 HOH TIP M . F 5 HOH 139 175 175 HOH TIP M . F 5 HOH 140 178 178 HOH TIP M . F 5 HOH 141 180 180 HOH TIP M . F 5 HOH 142 181 181 HOH TIP M . F 5 HOH 143 183 183 HOH TIP M . F 5 HOH 144 184 184 HOH TIP M . F 5 HOH 145 185 185 HOH TIP M . F 5 HOH 146 188 188 HOH TIP M . F 5 HOH 147 189 189 HOH TIP M . F 5 HOH 148 190 190 HOH TIP M . F 5 HOH 149 191 191 HOH TIP M . F 5 HOH 150 194 194 HOH TIP M . F 5 HOH 151 197 197 HOH TIP M . F 5 HOH 152 198 198 HOH TIP M . F 5 HOH 153 199 199 HOH TIP M . F 5 HOH 154 201 201 HOH TIP M . F 5 HOH 155 202 202 HOH TIP M . F 5 HOH 156 205 205 HOH TIP M . F 5 HOH 157 206 206 HOH TIP M . F 5 HOH 158 208 208 HOH TIP M . F 5 HOH 159 209 209 HOH TIP M . F 5 HOH 160 212 212 HOH TIP M . F 5 HOH 161 213 213 HOH TIP M . F 5 HOH 162 215 215 HOH TIP M . F 5 HOH 163 300 300 HOH TIP M . F 5 HOH 164 301 301 HOH TIP M . F 5 HOH 165 302 302 HOH TIP M . F 5 HOH 166 303 303 HOH TIP M . F 5 HOH 167 304 304 HOH TIP M . F 5 HOH 168 305 305 HOH TIP M . F 5 HOH 169 306 306 HOH TIP M . F 5 HOH 170 307 307 HOH TIP M . F 5 HOH 171 308 308 HOH TIP M . F 5 HOH 172 312 312 HOH TIP M . F 5 HOH 173 313 313 HOH TIP M . F 5 HOH 174 314 314 HOH TIP M . F 5 HOH 175 315 315 HOH TIP M . F 5 HOH 176 316 316 HOH TIP M . F 5 HOH 177 317 317 HOH TIP M . F 5 HOH 178 318 318 HOH TIP M . F 5 HOH 179 319 319 HOH TIP M . F 5 HOH 180 320 320 HOH TIP M . F 5 HOH 181 321 321 HOH TIP M . F 5 HOH 182 322 322 HOH TIP M . F 5 HOH 183 325 325 HOH TIP M . F 5 HOH 184 326 326 HOH TIP M . F 5 HOH 185 328 328 HOH TIP M . F 5 HOH 186 329 329 HOH TIP M . F 5 HOH 187 330 330 HOH TIP M . F 5 HOH 188 331 331 HOH TIP M . F 5 HOH 189 332 332 HOH TIP M . F 5 HOH 190 333 333 HOH TIP M . F 5 HOH 191 336 336 HOH TIP M . F 5 HOH 192 341 341 HOH TIP M . F 5 HOH 193 347 347 HOH TIP M . F 5 HOH 194 348 348 HOH TIP M . F 5 HOH 195 350 350 HOH TIP M . F 5 HOH 196 359 359 HOH TIP M . F 5 HOH 197 360 360 HOH TIP M . F 5 HOH 198 363 363 HOH TIP M . F 5 HOH 199 400 400 HOH TIP M . F 5 HOH 200 401 401 HOH TIP M . F 5 HOH 201 402 402 HOH TIP M . F 5 HOH 202 403 403 HOH TIP M . F 5 HOH 203 405 405 HOH TIP M . F 5 HOH 204 406 406 HOH TIP M . F 5 HOH 205 408 408 HOH TIP M . F 5 HOH 206 409 409 HOH TIP M . F 5 HOH 207 410 410 HOH TIP M . F 5 HOH 208 412 412 HOH TIP M . F 5 HOH 209 413 413 HOH TIP M . F 5 HOH 210 415 415 HOH TIP M . F 5 HOH 211 416 416 HOH TIP M . F 5 HOH 212 417 417 HOH TIP M . F 5 HOH 213 418 418 HOH TIP M . F 5 HOH 214 419 419 HOH TIP M . F 5 HOH 215 420 420 HOH TIP M . F 5 HOH 216 421 421 HOH TIP M . F 5 HOH 217 422 422 HOH TIP M . F 5 HOH 218 423 423 HOH TIP M . F 5 HOH 219 424 424 HOH TIP M . F 5 HOH 220 425 425 HOH TIP M . F 5 HOH 221 426 426 HOH TIP M . F 5 HOH 222 427 427 HOH TIP M . F 5 HOH 223 428 428 HOH TIP M . F 5 HOH 224 429 429 HOH TIP M . F 5 HOH 225 430 430 HOH TIP M . F 5 HOH 226 431 431 HOH TIP M . F 5 HOH 227 432 432 HOH TIP M . F 5 HOH 228 434 434 HOH TIP M . F 5 HOH 229 435 435 HOH TIP M . F 5 HOH 230 436 436 HOH TIP M . F 5 HOH 231 437 437 HOH TIP M . F 5 HOH 232 438 438 HOH TIP M . F 5 HOH 233 439 439 HOH TIP M . F 5 HOH 234 440 440 HOH TIP M . F 5 HOH 235 442 442 HOH TIP M . F 5 HOH 236 444 444 HOH TIP M . F 5 HOH 237 445 445 HOH TIP M . F 5 HOH 238 446 446 HOH TIP M . F 5 HOH 239 447 447 HOH TIP M . F 5 HOH 240 448 448 HOH TIP M . F 5 HOH 241 449 449 HOH TIP M . F 5 HOH 242 450 450 HOH TIP M . F 5 HOH 243 451 451 HOH TIP M . F 5 HOH 244 452 452 HOH TIP M . F 5 HOH 245 453 453 HOH TIP M . F 5 HOH 246 454 454 HOH TIP M . F 5 HOH 247 455 455 HOH TIP M . #