data_1DP7 # _entry.id 1DP7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DP7 pdb_00001dp7 10.2210/pdb1dp7/pdb NDB PD0111 ? ? RCSB RCSB010263 ? ? WWPDB D_1000010263 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-03-06 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-02-03 5 'Structure model' 1 4 2021-11-03 6 'Structure model' 1 5 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' 'Database references' 7 6 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' audit_author 2 4 'Structure model' citation_author 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_site 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 6 'Structure model' chem_comp_atom 8 6 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_audit_author.identifier_ORCID' 2 4 'Structure model' '_citation_author.identifier_ORCID' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 7 5 'Structure model' '_database_2.pdbx_DOI' 8 5 'Structure model' '_database_2.pdbx_database_accession' 9 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DP7 _pdbx_database_status.recvd_initial_deposition_date 1999-12-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gajiwala, K.S.' 1 ? 'Chen, H.' 2 ? 'Cornille, F.' 3 ? 'Roques, B.P.' 4 ? 'Reith, W.' 5 ? 'Mach, B.' 6 ? 'Burley, S.K.' 7 0000-0002-2487-9713 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structure of the winged-helix protein hRFX1 reveals a new mode of DNA binding.' Nature 403 916 921 2000 NATUAS UK 0028-0836 0006 ? 10706293 10.1038/35002634 1 'Co-crystal structure of the HNF-3/fork head DNA-recognition motif resembles histone H5' Nature 364 412 420 1993 NATUAS UK 0028-0836 0006 ? ? 10.1038/364412a0 2 'Crystal structure of globular domain of histone H5 and its implications for nucleosome binding' Nature 362 219 223 1993 NATUAS UK 0028-0836 0006 ? ? 10.1038/362219a0 3 'A consensus motif in the RFX DNA binding domain and binding domain mutants with altered specificity' Mol.Cell.Biol. 16 4486 4494 1996 MCEBD4 US 0270-7306 2044 ? ? ? 4 ;RFX1, a transactivator of hepatitis B virus enhancer I, belongs to a novel family of homodimeric and heterodimeric DNA-binding proteins ; Mol.Cell.Biol. 14 1230 1244 1994 MCEBD4 US 0270-7306 2044 ? ? ? 5 'DNA binding properties of a chemically synthesized DNA binding domain of hRFX1' 'Nucleic Acids Res.' 26 2143 2149 1998 NARHAD UK 0305-1048 0389 ? ? 10.1093/nar/26.9.2143 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gajiwala, K.S.' 1 ? primary 'Chen, H.' 2 ? primary 'Cornille, F.' 3 ? primary 'Roques, B.P.' 4 ? primary 'Reith, W.' 5 ? primary 'Mach, B.' 6 ? primary 'Burley, S.K.' 7 0000-0002-2487-9713 1 'Clark, K.L.' 8 ? 1 'Halay, E.D.' 9 ? 1 'Lai, E.' 10 ? 1 'Burley, S.K.' 11 0000-0002-2487-9713 2 'Ramakrishnan, V.' 12 ? 2 'Finch, J.' 13 ? 2 'Graziano, V.' 14 ? 2 'Sweet, R.' 15 ? 3 'Emery, P.' 16 ? 3 'Strubin, M.' 17 ? 3 'Hofmann, K.' 18 ? 3 'Bucher, P.' 19 ? 3 'Mach, B.' 20 ? 3 'Reith, W.' 21 ? 4 'Reith, W.' 22 ? 4 'Ucla, C.' 23 ? 4 'Barras, E.' 24 ? 4 'Gaud, A.' 25 ? 4 'Durand, B.' 26 ? 4 'Herrero-Sanchez, C.' 27 ? 4 'Kobr, M.' 28 ? 4 'Mach, B.' 29 ? 5 'Cornille, F.' 30 ? 5 'Emery, P.' 31 ? 5 'Schuler, W.' 32 ? 5 'Lenoir, C.' 33 ? 5 'Mach, B.' 34 ? 5 'Roques, B.P.' 35 ? 5 'Reith, W.' 36 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*GP*(BRU)P*TP*AP*CP*CP*AP*(BRU)P*GP*GP*TP*AP*AP*CP*G)-3') ; 5027.931 1 ? ? X-BOX ? 2 polymer syn 'MHC CLASS II TRANSCRIPTION FACTOR HRFX1' 8829.081 1 ? C24N,C30S 'DNA BINDING DOMAIN' ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 5 water nat water 18.015 124 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'REGULATORY FACTOR X' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DG)(BRU)(DT)(DA)(DC)(DC)(DA)(BRU)(DG)(DG)(DT)(DA)(DA)(DC)(DG)' CGUTACCAUGGTAACG D ? 2 'polypeptide(L)' no no TVQWLLDNYETAEGVSLPRSTLYNHYLLHSQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKA TVQWLLDNYETAEGVSLPRSTLYNHYLLHSQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKA P ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 1,2-ETHANEDIOL EDO 4 'DI(HYDROXYETHYL)ETHER' PEG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 BRU n 1 4 DT n 1 5 DA n 1 6 DC n 1 7 DC n 1 8 DA n 1 9 BRU n 1 10 DG n 1 11 DG n 1 12 DT n 1 13 DA n 1 14 DA n 1 15 DC n 1 16 DG n 2 1 THR n 2 2 VAL n 2 3 GLN n 2 4 TRP n 2 5 LEU n 2 6 LEU n 2 7 ASP n 2 8 ASN n 2 9 TYR n 2 10 GLU n 2 11 THR n 2 12 ALA n 2 13 GLU n 2 14 GLY n 2 15 VAL n 2 16 SER n 2 17 LEU n 2 18 PRO n 2 19 ARG n 2 20 SER n 2 21 THR n 2 22 LEU n 2 23 TYR n 2 24 ASN n 2 25 HIS n 2 26 TYR n 2 27 LEU n 2 28 LEU n 2 29 HIS n 2 30 SER n 2 31 GLN n 2 32 GLU n 2 33 GLN n 2 34 LYS n 2 35 LEU n 2 36 GLU n 2 37 PRO n 2 38 VAL n 2 39 ASN n 2 40 ALA n 2 41 ALA n 2 42 SER n 2 43 PHE n 2 44 GLY n 2 45 LYS n 2 46 LEU n 2 47 ILE n 2 48 ARG n 2 49 SER n 2 50 VAL n 2 51 PHE n 2 52 MET n 2 53 GLY n 2 54 LEU n 2 55 ARG n 2 56 THR n 2 57 ARG n 2 58 ARG n 2 59 LEU n 2 60 GLY n 2 61 THR n 2 62 ARG n 2 63 GLY n 2 64 ASN n 2 65 SER n 2 66 LYS n 2 67 TYR n 2 68 HIS n 2 69 TYR n 2 70 TYR n 2 71 GLY n 2 72 LEU n 2 73 ARG n 2 74 ILE n 2 75 LYS n 2 76 ALA n # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'SEQUENCE TAKEN FROM HUMAN MHC CLASS II TRANSCRIPTION FACTOR' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C D . n A 1 2 DG 2 2 2 DG G D . n A 1 3 BRU 3 3 3 BRU +U D . n A 1 4 DT 4 4 4 DT T D . n A 1 5 DA 5 5 5 DA A D . n A 1 6 DC 6 6 6 DC C D . n A 1 7 DC 7 7 7 DC C D . n A 1 8 DA 8 8 8 DA A D . n A 1 9 BRU 9 9 9 BRU +U D . n A 1 10 DG 10 10 10 DG G D . n A 1 11 DG 11 11 11 DG G D . n A 1 12 DT 12 12 12 DT T D . n A 1 13 DA 13 13 13 DA A D . n A 1 14 DA 14 14 14 DA A D . n A 1 15 DC 15 15 15 DC C D . n A 1 16 DG 16 16 16 DG G D . n B 2 1 THR 1 1 1 THR THR P . n B 2 2 VAL 2 2 2 VAL VAL P . n B 2 3 GLN 3 3 3 GLN GLN P . n B 2 4 TRP 4 4 4 TRP TRP P . n B 2 5 LEU 5 5 5 LEU LEU P . n B 2 6 LEU 6 6 6 LEU LEU P . n B 2 7 ASP 7 7 7 ASP ASP P . n B 2 8 ASN 8 8 8 ASN ASN P . n B 2 9 TYR 9 9 9 TYR TYR P . n B 2 10 GLU 10 10 10 GLU GLU P . n B 2 11 THR 11 11 11 THR THR P . n B 2 12 ALA 12 12 12 ALA ALA P . n B 2 13 GLU 13 13 13 GLU GLU P . n B 2 14 GLY 14 14 14 GLY GLY P . n B 2 15 VAL 15 15 15 VAL VAL P . n B 2 16 SER 16 16 16 SER SER P . n B 2 17 LEU 17 17 17 LEU LEU P . n B 2 18 PRO 18 18 18 PRO PRO P . n B 2 19 ARG 19 19 19 ARG ARG P . n B 2 20 SER 20 20 20 SER SER P . n B 2 21 THR 21 21 21 THR THR P . n B 2 22 LEU 22 22 22 LEU LEU P . n B 2 23 TYR 23 23 23 TYR TYR P . n B 2 24 ASN 24 24 24 ASN ASN P . n B 2 25 HIS 25 25 25 HIS HIS P . n B 2 26 TYR 26 26 26 TYR TYR P . n B 2 27 LEU 27 27 27 LEU LEU P . n B 2 28 LEU 28 28 28 LEU LEU P . n B 2 29 HIS 29 29 29 HIS HIS P . n B 2 30 SER 30 30 30 SER SER P . n B 2 31 GLN 31 31 31 GLN GLN P . n B 2 32 GLU 32 32 32 GLU GLU P . n B 2 33 GLN 33 33 33 GLN GLN P . n B 2 34 LYS 34 34 34 LYS LYS P . n B 2 35 LEU 35 35 35 LEU LEU P . n B 2 36 GLU 36 36 36 GLU GLU P . n B 2 37 PRO 37 37 37 PRO PRO P . n B 2 38 VAL 38 38 38 VAL VAL P . n B 2 39 ASN 39 39 39 ASN ASN P . n B 2 40 ALA 40 40 40 ALA ALA P . n B 2 41 ALA 41 41 41 ALA ALA P . n B 2 42 SER 42 42 42 SER SER P . n B 2 43 PHE 43 43 43 PHE PHE P . n B 2 44 GLY 44 44 44 GLY GLY P . n B 2 45 LYS 45 45 45 LYS LYS P . n B 2 46 LEU 46 46 46 LEU LEU P . n B 2 47 ILE 47 47 47 ILE ILE P . n B 2 48 ARG 48 48 48 ARG ARG P . n B 2 49 SER 49 49 49 SER SER P . n B 2 50 VAL 50 50 50 VAL VAL P . n B 2 51 PHE 51 51 51 PHE PHE P . n B 2 52 MET 52 52 52 MET MET P . n B 2 53 GLY 53 53 53 GLY GLY P . n B 2 54 LEU 54 54 54 LEU LEU P . n B 2 55 ARG 55 55 55 ARG ARG P . n B 2 56 THR 56 56 56 THR THR P . n B 2 57 ARG 57 57 57 ARG ARG P . n B 2 58 ARG 58 58 58 ARG ARG P . n B 2 59 LEU 59 59 59 LEU LEU P . n B 2 60 GLY 60 60 60 GLY GLY P . n B 2 61 THR 61 61 61 THR THR P . n B 2 62 ARG 62 62 62 ARG ARG P . n B 2 63 GLY 63 63 63 GLY GLY P . n B 2 64 ASN 64 64 64 ASN ASN P . n B 2 65 SER 65 65 65 SER SER P . n B 2 66 LYS 66 66 66 LYS LYS P . n B 2 67 TYR 67 67 67 TYR TYR P . n B 2 68 HIS 68 68 68 HIS HIS P . n B 2 69 TYR 69 69 69 TYR TYR P . n B 2 70 TYR 70 70 70 TYR TYR P . n B 2 71 GLY 71 71 71 GLY GLY P . n B 2 72 LEU 72 72 72 LEU LEU P . n B 2 73 ARG 73 73 73 ARG ARG P . n B 2 74 ILE 74 74 74 ILE ILE P . n B 2 75 LYS 75 75 75 LYS LYS P . n B 2 76 ALA 76 76 76 ALA ALA P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO 1 501 1 EDO EDO P . D 3 EDO 1 502 2 EDO EDO P . E 4 PEG 1 503 1 PEG PEG P . F 5 HOH 1 17 1 HOH WAT D . F 5 HOH 2 18 6 HOH WAT D . F 5 HOH 3 19 10 HOH WAT D . F 5 HOH 4 20 14 HOH WAT D . F 5 HOH 5 21 16 HOH WAT D . F 5 HOH 6 22 21 HOH WAT D . F 5 HOH 7 23 22 HOH WAT D . F 5 HOH 8 24 24 HOH WAT D . F 5 HOH 9 25 26 HOH WAT D . F 5 HOH 10 26 30 HOH WAT D . F 5 HOH 11 27 32 HOH WAT D . F 5 HOH 12 28 33 HOH WAT D . F 5 HOH 13 29 34 HOH WAT D . F 5 HOH 14 30 35 HOH WAT D . F 5 HOH 15 31 37 HOH WAT D . F 5 HOH 16 32 38 HOH WAT D . F 5 HOH 17 33 40 HOH WAT D . F 5 HOH 18 34 45 HOH WAT D . F 5 HOH 19 35 47 HOH WAT D . F 5 HOH 20 36 48 HOH WAT D . F 5 HOH 21 37 52 HOH WAT D . F 5 HOH 22 38 53 HOH WAT D . F 5 HOH 23 39 55 HOH WAT D . F 5 HOH 24 40 69 HOH WAT D . F 5 HOH 25 41 71 HOH WAT D . F 5 HOH 26 42 73 HOH WAT D . F 5 HOH 27 43 76 HOH WAT D . F 5 HOH 28 44 77 HOH WAT D . F 5 HOH 29 45 78 HOH WAT D . F 5 HOH 30 46 79 HOH WAT D . F 5 HOH 31 47 81 HOH WAT D . F 5 HOH 32 48 83 HOH WAT D . F 5 HOH 33 49 87 HOH WAT D . F 5 HOH 34 50 88 HOH WAT D . F 5 HOH 35 51 93 HOH WAT D . F 5 HOH 36 52 96 HOH WAT D . F 5 HOH 37 53 102 HOH WAT D . F 5 HOH 38 54 103 HOH WAT D . F 5 HOH 39 55 104 HOH WAT D . F 5 HOH 40 56 105 HOH WAT D . F 5 HOH 41 57 108 HOH WAT D . F 5 HOH 42 58 109 HOH WAT D . F 5 HOH 43 59 111 HOH WAT D . F 5 HOH 44 60 112 HOH WAT D . F 5 HOH 45 61 114 HOH WAT D . F 5 HOH 46 62 115 HOH WAT D . F 5 HOH 47 63 121 HOH WAT D . F 5 HOH 48 64 123 HOH WAT D . F 5 HOH 49 65 124 HOH WAT D . G 5 HOH 1 504 2 HOH WAT P . G 5 HOH 2 505 3 HOH WAT P . G 5 HOH 3 506 4 HOH WAT P . G 5 HOH 4 507 5 HOH WAT P . G 5 HOH 5 508 7 HOH WAT P . G 5 HOH 6 509 8 HOH WAT P . G 5 HOH 7 510 9 HOH WAT P . G 5 HOH 8 511 11 HOH WAT P . G 5 HOH 9 512 12 HOH WAT P . G 5 HOH 10 513 13 HOH WAT P . G 5 HOH 11 514 15 HOH WAT P . G 5 HOH 12 515 17 HOH WAT P . G 5 HOH 13 516 18 HOH WAT P . G 5 HOH 14 517 19 HOH WAT P . G 5 HOH 15 518 20 HOH WAT P . G 5 HOH 16 519 23 HOH WAT P . G 5 HOH 17 520 25 HOH WAT P . G 5 HOH 18 521 27 HOH WAT P . G 5 HOH 19 522 28 HOH WAT P . G 5 HOH 20 523 29 HOH WAT P . G 5 HOH 21 524 31 HOH WAT P . G 5 HOH 22 525 36 HOH WAT P . G 5 HOH 23 526 39 HOH WAT P . G 5 HOH 24 527 41 HOH WAT P . G 5 HOH 25 528 42 HOH WAT P . G 5 HOH 26 529 43 HOH WAT P . G 5 HOH 27 530 44 HOH WAT P . G 5 HOH 28 531 46 HOH WAT P . G 5 HOH 29 532 49 HOH WAT P . G 5 HOH 30 533 50 HOH WAT P . G 5 HOH 31 534 51 HOH WAT P . G 5 HOH 32 535 54 HOH WAT P . G 5 HOH 33 536 56 HOH WAT P . G 5 HOH 34 537 57 HOH WAT P . G 5 HOH 35 538 58 HOH WAT P . G 5 HOH 36 539 59 HOH WAT P . G 5 HOH 37 540 60 HOH WAT P . G 5 HOH 38 541 61 HOH WAT P . G 5 HOH 39 542 62 HOH WAT P . G 5 HOH 40 543 63 HOH WAT P . G 5 HOH 41 544 64 HOH WAT P . G 5 HOH 42 545 65 HOH WAT P . G 5 HOH 43 546 66 HOH WAT P . G 5 HOH 44 547 67 HOH WAT P . G 5 HOH 45 548 68 HOH WAT P . G 5 HOH 46 549 70 HOH WAT P . G 5 HOH 47 550 72 HOH WAT P . G 5 HOH 48 551 74 HOH WAT P . G 5 HOH 49 552 75 HOH WAT P . G 5 HOH 50 553 80 HOH WAT P . G 5 HOH 51 554 82 HOH WAT P . G 5 HOH 52 555 84 HOH WAT P . G 5 HOH 53 556 85 HOH WAT P . G 5 HOH 54 557 86 HOH WAT P . G 5 HOH 55 558 89 HOH WAT P . G 5 HOH 56 559 90 HOH WAT P . G 5 HOH 57 560 91 HOH WAT P . G 5 HOH 58 561 92 HOH WAT P . G 5 HOH 59 562 94 HOH WAT P . G 5 HOH 60 563 95 HOH WAT P . G 5 HOH 61 564 97 HOH WAT P . G 5 HOH 62 565 98 HOH WAT P . G 5 HOH 63 566 99 HOH WAT P . G 5 HOH 64 567 100 HOH WAT P . G 5 HOH 65 568 101 HOH WAT P . G 5 HOH 66 569 106 HOH WAT P . G 5 HOH 67 570 107 HOH WAT P . G 5 HOH 68 571 110 HOH WAT P . G 5 HOH 69 572 113 HOH WAT P . G 5 HOH 70 573 116 HOH WAT P . G 5 HOH 71 574 117 HOH WAT P . G 5 HOH 72 575 118 HOH WAT P . G 5 HOH 73 576 119 HOH WAT P . G 5 HOH 74 577 120 HOH WAT P . G 5 HOH 75 578 122 HOH WAT P . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SOLVE phasing . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 1DP7 _cell.length_a 72.843 _cell.length_b 42.752 _cell.length_c 52.277 _cell.angle_alpha 90.00 _cell.angle_beta 109.21 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DP7 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 # _exptl.entry_id 1DP7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_percent_sol 55.43 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 400, MAGNESIUM ACETATE, SODIUM CACODYLATE, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'MAGNESIUM ACETATE' ? ? ? 1 2 1 'SODIUM CACODYLATE' ? ? ? 1 3 1 'PEG 400' ? ? ? 1 4 2 'PEG 400' ? ? ? # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 120 ? 1 2 120 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD 'ADSC QUANTUM 4' 1999-02-03 ? 2 CCD 'ADSC QUANTUM 4' 1999-02-21 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_scattering_type 1 1 M ? 'SINGLE WAVELENGTH' x-ray 2 1 M ? 'SINGLE WAVELENGTH' x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9201 1.0 2 0.9200 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 'CHESS BEAMLINE F2' CHESS F2 0.9201 ? 2 SYNCHROTRON 'NSLS BEAMLINE X9A' NSLS X9A 0.9200 ? # _reflns.entry_id 1DP7 _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 10.0 _reflns.d_resolution_high 1.5 _reflns.number_obs 22780 _reflns.number_all ? _reflns.percent_possible_obs 96.5 _reflns.pdbx_Rmerge_I_obs 0.052 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.8 _reflns.B_iso_Wilson_estimate 17 _reflns.pdbx_redundancy 2 _reflns.R_free_details ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.55 _reflns_shell.percent_possible_all 94.6 _reflns_shell.Rmerge_I_obs 0.472 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1DP7 _refine.ls_number_reflns_obs 19335 _refine.ls_number_reflns_all 22780 _refine.pdbx_ls_sigma_I 3.0 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 1.5 _refine.ls_percent_reflns_obs 79.3 _refine.ls_R_factor_obs 0.192 _refine.ls_R_factor_all 0.192 _refine.ls_R_factor_R_work 0.192 _refine.ls_R_factor_R_free 0.228 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10 _refine.ls_number_reflns_R_free 1947 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 3.162 _refine.aniso_B[2][2] -3.466 _refine.aniso_B[3][3] 0.304 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 624 _refine_hist.pdbx_number_atoms_nucleic_acid 325 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 131 _refine_hist.number_atoms_total 1090 _refine_hist.d_res_high 1.5 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.016 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.79 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1DP7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DP7 _struct.title 'COCRYSTAL STRUCTURE OF RFX-DBD IN COMPLEX WITH ITS COGNATE X-BOX BINDING SITE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DP7 _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text ;WINGED HELIX, MHC CLASS II TRANSCRIPTION FACTOR, PROTEIN-DNA COCRYSTAL STRUCTURE, NOVEL MODE OF DNA RECOGNITION, TRANSCRIPTION-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP RFX1_HUMAN 2 P22670 ? ? ? 2 PDB 1DP7 1 1DP7 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1DP7 P 1 ? 76 ? P22670 438 ? 513 ? 1 76 2 2 1DP7 D 1 ? 16 ? 1DP7 1 ? 16 ? 1 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1DP7 ASN P 24 ? UNP P22670 CYS 461 'engineered mutation' 24 1 1 1DP7 SER P 30 ? UNP P22670 CYS 467 'engineered mutation' 30 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_757 -x+2,y,-z+2 -1.0000000000 0.0000000000 0.0000000000 111.2844440516 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 98.7323243134 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR B 1 ? ASN B 8 ? THR P 1 ASN P 8 1 ? 8 HELX_P HELX_P2 2 ARG B 19 ? GLN B 33 ? ARG P 19 GLN P 33 1 ? 15 HELX_P HELX_P3 3 ASN B 39 ? PHE B 51 ? ASN P 39 PHE P 51 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DG 2 "O3'" ? ? ? 1_555 A BRU 3 P ? ? D DG 2 D BRU 3 1_555 ? ? ? ? ? ? ? 1.592 ? ? covale2 covale both ? A BRU 3 "O3'" ? ? ? 1_555 A DT 4 P ? ? D BRU 3 D DT 4 1_555 ? ? ? ? ? ? ? 1.564 ? ? covale3 covale both ? A DA 8 "O3'" ? ? ? 1_555 A BRU 9 P ? ? D DA 8 D BRU 9 1_555 ? ? ? ? ? ? ? 1.584 ? ? covale4 covale both ? A BRU 9 "O3'" ? ? ? 1_555 A DG 10 P ? ? D BRU 9 D DG 10 1_555 ? ? ? ? ? ? ? 1.581 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 16 N1 ? ? D DC 1 D DG 16 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 16 O6 ? ? D DC 1 D DG 16 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 16 N2 ? ? D DC 1 D DG 16 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DC 15 N3 ? ? D DG 2 D DC 15 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DC 15 O2 ? ? D DG 2 D DC 15 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DC 15 N4 ? ? D DG 2 D DC 15 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A BRU 3 N3 ? ? ? 1_555 A DA 14 N1 ? ? D BRU 3 D DA 14 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A BRU 3 O4 ? ? ? 1_555 A DA 14 N6 ? ? D BRU 3 D DA 14 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 13 N1 ? ? D DT 4 D DA 13 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 13 N6 ? ? D DT 4 D DA 13 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 12 N3 ? ? D DA 5 D DT 12 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 12 O4 ? ? D DA 5 D DT 12 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 11 N1 ? ? D DC 6 D DG 11 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 11 O6 ? ? D DC 6 D DG 11 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 11 N2 ? ? D DC 6 D DG 11 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 N3 ? ? ? 1_555 A DG 10 N1 ? ? D DC 7 D DG 10 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 N4 ? ? ? 1_555 A DG 10 O6 ? ? D DC 7 D DG 10 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 7 O2 ? ? ? 1_555 A DG 10 N2 ? ? D DC 7 D DG 10 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 8 N1 ? ? ? 1_555 A BRU 9 N3 ? ? D DA 8 D BRU 9 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 8 N6 ? ? ? 1_555 A BRU 9 O4 ? ? D DA 8 D BRU 9 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A BRU 9 N3 ? ? ? 1_555 A DA 8 N1 ? ? D BRU 9 D DA 8 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A BRU 9 O4 ? ? ? 1_555 A DA 8 N6 ? ? D BRU 9 D DA 8 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DC 7 N3 ? ? D DG 10 D DC 7 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DC 7 O2 ? ? D DG 10 D DC 7 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 7 N4 ? ? D DG 10 D DC 7 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 11 N1 ? ? ? 1_555 A DC 6 N3 ? ? D DG 11 D DC 6 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DC 6 O2 ? ? D DG 11 D DC 6 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 11 O6 ? ? ? 1_555 A DC 6 N4 ? ? D DG 11 D DC 6 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DT 12 N3 ? ? ? 1_555 A DA 5 N1 ? ? D DT 12 D DA 5 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 12 O4 ? ? ? 1_555 A DA 5 N6 ? ? D DT 12 D DA 5 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 13 N1 ? ? ? 1_555 A DT 4 N3 ? ? D DA 13 D DT 4 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 13 N6 ? ? ? 1_555 A DT 4 O4 ? ? D DA 13 D DT 4 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DA 14 N1 ? ? ? 1_555 A BRU 3 N3 ? ? D DA 14 D BRU 3 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DA 14 N6 ? ? ? 1_555 A BRU 3 O4 ? ? D DA 14 D BRU 3 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 15 N3 ? ? ? 1_555 A DG 2 N1 ? ? D DC 15 D DG 2 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 15 N4 ? ? ? 1_555 A DG 2 O6 ? ? D DC 15 D DG 2 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 15 O2 ? ? ? 1_555 A DG 2 N2 ? ? D DC 15 D DG 2 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DC 1 N3 ? ? D DG 16 D DC 1 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DC 1 O2 ? ? D DG 16 D DC 1 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DC 1 N4 ? ? D DG 16 D DC 1 2_757 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR B 9 ? PRO B 18 ? TYR P 9 PRO P 18 A 2 LYS B 66 ? ILE B 74 ? LYS P 66 ILE P 74 A 3 ARG B 55 ? LEU B 59 ? ARG P 55 LEU P 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU B 17 ? O LEU P 17 N TYR B 69 ? N TYR P 69 A 2 3 N TYR B 70 ? N TYR P 70 O ARG B 55 ? O ARG P 55 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software P EDO 501 ? 4 'BINDING SITE FOR RESIDUE EDO P 501' AC2 Software P EDO 502 ? 4 'BINDING SITE FOR RESIDUE EDO P 502' AC3 Software P PEG 503 ? 6 'BINDING SITE FOR RESIDUE PEG P 503' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HOH F . ? HOH D 37 . ? 2_757 ? 2 AC1 4 HOH F . ? HOH D 43 . ? 2_757 ? 3 AC1 4 THR B 56 ? THR P 56 . ? 1_555 ? 4 AC1 4 HOH G . ? HOH P 563 . ? 1_555 ? 5 AC2 4 VAL B 2 ? VAL P 2 . ? 1_555 ? 6 AC2 4 SER B 49 ? SER P 49 . ? 1_555 ? 7 AC2 4 VAL B 50 ? VAL P 50 . ? 1_555 ? 8 AC2 4 HOH G . ? HOH P 549 . ? 4_657 ? 9 AC3 6 PRO B 18 ? PRO P 18 . ? 4_657 ? 10 AC3 6 THR B 21 ? THR P 21 . ? 4_657 ? 11 AC3 6 MET B 52 ? MET P 52 . ? 1_555 ? 12 AC3 6 GLY B 53 ? GLY P 53 . ? 1_555 ? 13 AC3 6 ARG B 55 ? ARG P 55 . ? 1_555 ? 14 AC3 6 HOH G . ? HOH P 523 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 D _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 31 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 D _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 55 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.09 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA D 5 ? ? 0.051 'SIDE CHAIN' 2 1 DG D 11 ? ? 0.057 'SIDE CHAIN' # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A BRU 3 D BRU 3 ? DU ? 2 A BRU 9 D BRU 9 ? DU ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BRU N1 N N N 74 BRU C2 C N N 75 BRU N3 N N N 76 BRU C4 C N N 77 BRU C5 C N N 78 BRU C6 C N N 79 BRU O2 O N N 80 BRU O4 O N N 81 BRU BR BR N N 82 BRU "C1'" C N R 83 BRU "C2'" C N N 84 BRU "C3'" C N S 85 BRU "C4'" C N R 86 BRU "O3'" O N N 87 BRU "O4'" O N N 88 BRU "C5'" C N N 89 BRU "O5'" O N N 90 BRU P P N N 91 BRU OP1 O N N 92 BRU OP2 O N N 93 BRU OP3 O N N 94 BRU HN3 H N N 95 BRU H6 H N N 96 BRU "H1'" H N N 97 BRU "H2'" H N N 98 BRU "H2''" H N N 99 BRU "H3'" H N N 100 BRU "H4'" H N N 101 BRU "HO3'" H N N 102 BRU "H5'" H N N 103 BRU "H5''" H N N 104 BRU HOP2 H N N 105 BRU HOP3 H N N 106 CYS N N N N 107 CYS CA C N R 108 CYS C C N N 109 CYS O O N N 110 CYS CB C N N 111 CYS SG S N N 112 CYS OXT O N N 113 CYS H H N N 114 CYS H2 H N N 115 CYS HA H N N 116 CYS HB2 H N N 117 CYS HB3 H N N 118 CYS HG H N N 119 CYS HXT H N N 120 DA OP3 O N N 121 DA P P N N 122 DA OP1 O N N 123 DA OP2 O N N 124 DA "O5'" O N N 125 DA "C5'" C N N 126 DA "C4'" C N R 127 DA "O4'" O N N 128 DA "C3'" C N S 129 DA "O3'" O N N 130 DA "C2'" C N N 131 DA "C1'" C N R 132 DA N9 N Y N 133 DA C8 C Y N 134 DA N7 N Y N 135 DA C5 C Y N 136 DA C6 C Y N 137 DA N6 N N N 138 DA N1 N Y N 139 DA C2 C Y N 140 DA N3 N Y N 141 DA C4 C Y N 142 DA HOP3 H N N 143 DA HOP2 H N N 144 DA "H5'" H N N 145 DA "H5''" H N N 146 DA "H4'" H N N 147 DA "H3'" H N N 148 DA "HO3'" H N N 149 DA "H2'" H N N 150 DA "H2''" H N N 151 DA "H1'" H N N 152 DA H8 H N N 153 DA H61 H N N 154 DA H62 H N N 155 DA H2 H N N 156 DC OP3 O N N 157 DC P P N N 158 DC OP1 O N N 159 DC OP2 O N N 160 DC "O5'" O N N 161 DC "C5'" C N N 162 DC "C4'" C N R 163 DC "O4'" O N N 164 DC "C3'" C N S 165 DC "O3'" O N N 166 DC "C2'" C N N 167 DC "C1'" C N R 168 DC N1 N N N 169 DC C2 C N N 170 DC O2 O N N 171 DC N3 N N N 172 DC C4 C N N 173 DC N4 N N N 174 DC C5 C N N 175 DC C6 C N N 176 DC HOP3 H N N 177 DC HOP2 H N N 178 DC "H5'" H N N 179 DC "H5''" H N N 180 DC "H4'" H N N 181 DC "H3'" H N N 182 DC "HO3'" H N N 183 DC "H2'" H N N 184 DC "H2''" H N N 185 DC "H1'" H N N 186 DC H41 H N N 187 DC H42 H N N 188 DC H5 H N N 189 DC H6 H N N 190 DG OP3 O N N 191 DG P P N N 192 DG OP1 O N N 193 DG OP2 O N N 194 DG "O5'" O N N 195 DG "C5'" C N N 196 DG "C4'" C N R 197 DG "O4'" O N N 198 DG "C3'" C N S 199 DG "O3'" O N N 200 DG "C2'" C N N 201 DG "C1'" C N R 202 DG N9 N Y N 203 DG C8 C Y N 204 DG N7 N Y N 205 DG C5 C Y N 206 DG C6 C N N 207 DG O6 O N N 208 DG N1 N N N 209 DG C2 C N N 210 DG N2 N N N 211 DG N3 N N N 212 DG C4 C Y N 213 DG HOP3 H N N 214 DG HOP2 H N N 215 DG "H5'" H N N 216 DG "H5''" H N N 217 DG "H4'" H N N 218 DG "H3'" H N N 219 DG "HO3'" H N N 220 DG "H2'" H N N 221 DG "H2''" H N N 222 DG "H1'" H N N 223 DG H8 H N N 224 DG H1 H N N 225 DG H21 H N N 226 DG H22 H N N 227 DT OP3 O N N 228 DT P P N N 229 DT OP1 O N N 230 DT OP2 O N N 231 DT "O5'" O N N 232 DT "C5'" C N N 233 DT "C4'" C N R 234 DT "O4'" O N N 235 DT "C3'" C N S 236 DT "O3'" O N N 237 DT "C2'" C N N 238 DT "C1'" C N R 239 DT N1 N N N 240 DT C2 C N N 241 DT O2 O N N 242 DT N3 N N N 243 DT C4 C N N 244 DT O4 O N N 245 DT C5 C N N 246 DT C7 C N N 247 DT C6 C N N 248 DT HOP3 H N N 249 DT HOP2 H N N 250 DT "H5'" H N N 251 DT "H5''" H N N 252 DT "H4'" H N N 253 DT "H3'" H N N 254 DT "HO3'" H N N 255 DT "H2'" H N N 256 DT "H2''" H N N 257 DT "H1'" H N N 258 DT H3 H N N 259 DT H71 H N N 260 DT H72 H N N 261 DT H73 H N N 262 DT H6 H N N 263 EDO C1 C N N 264 EDO O1 O N N 265 EDO C2 C N N 266 EDO O2 O N N 267 EDO H11 H N N 268 EDO H12 H N N 269 EDO HO1 H N N 270 EDO H21 H N N 271 EDO H22 H N N 272 EDO HO2 H N N 273 GLN N N N N 274 GLN CA C N S 275 GLN C C N N 276 GLN O O N N 277 GLN CB C N N 278 GLN CG C N N 279 GLN CD C N N 280 GLN OE1 O N N 281 GLN NE2 N N N 282 GLN OXT O N N 283 GLN H H N N 284 GLN H2 H N N 285 GLN HA H N N 286 GLN HB2 H N N 287 GLN HB3 H N N 288 GLN HG2 H N N 289 GLN HG3 H N N 290 GLN HE21 H N N 291 GLN HE22 H N N 292 GLN HXT H N N 293 GLU N N N N 294 GLU CA C N S 295 GLU C C N N 296 GLU O O N N 297 GLU CB C N N 298 GLU CG C N N 299 GLU CD C N N 300 GLU OE1 O N N 301 GLU OE2 O N N 302 GLU OXT O N N 303 GLU H H N N 304 GLU H2 H N N 305 GLU HA H N N 306 GLU HB2 H N N 307 GLU HB3 H N N 308 GLU HG2 H N N 309 GLU HG3 H N N 310 GLU HE2 H N N 311 GLU HXT H N N 312 GLY N N N N 313 GLY CA C N N 314 GLY C C N N 315 GLY O O N N 316 GLY OXT O N N 317 GLY H H N N 318 GLY H2 H N N 319 GLY HA2 H N N 320 GLY HA3 H N N 321 GLY HXT H N N 322 HIS N N N N 323 HIS CA C N S 324 HIS C C N N 325 HIS O O N N 326 HIS CB C N N 327 HIS CG C Y N 328 HIS ND1 N Y N 329 HIS CD2 C Y N 330 HIS CE1 C Y N 331 HIS NE2 N Y N 332 HIS OXT O N N 333 HIS H H N N 334 HIS H2 H N N 335 HIS HA H N N 336 HIS HB2 H N N 337 HIS HB3 H N N 338 HIS HD1 H N N 339 HIS HD2 H N N 340 HIS HE1 H N N 341 HIS HE2 H N N 342 HIS HXT H N N 343 HOH O O N N 344 HOH H1 H N N 345 HOH H2 H N N 346 ILE N N N N 347 ILE CA C N S 348 ILE C C N N 349 ILE O O N N 350 ILE CB C N S 351 ILE CG1 C N N 352 ILE CG2 C N N 353 ILE CD1 C N N 354 ILE OXT O N N 355 ILE H H N N 356 ILE H2 H N N 357 ILE HA H N N 358 ILE HB H N N 359 ILE HG12 H N N 360 ILE HG13 H N N 361 ILE HG21 H N N 362 ILE HG22 H N N 363 ILE HG23 H N N 364 ILE HD11 H N N 365 ILE HD12 H N N 366 ILE HD13 H N N 367 ILE HXT H N N 368 LEU N N N N 369 LEU CA C N S 370 LEU C C N N 371 LEU O O N N 372 LEU CB C N N 373 LEU CG C N N 374 LEU CD1 C N N 375 LEU CD2 C N N 376 LEU OXT O N N 377 LEU H H N N 378 LEU H2 H N N 379 LEU HA H N N 380 LEU HB2 H N N 381 LEU HB3 H N N 382 LEU HG H N N 383 LEU HD11 H N N 384 LEU HD12 H N N 385 LEU HD13 H N N 386 LEU HD21 H N N 387 LEU HD22 H N N 388 LEU HD23 H N N 389 LEU HXT H N N 390 LYS N N N N 391 LYS CA C N S 392 LYS C C N N 393 LYS O O N N 394 LYS CB C N N 395 LYS CG C N N 396 LYS CD C N N 397 LYS CE C N N 398 LYS NZ N N N 399 LYS OXT O N N 400 LYS H H N N 401 LYS H2 H N N 402 LYS HA H N N 403 LYS HB2 H N N 404 LYS HB3 H N N 405 LYS HG2 H N N 406 LYS HG3 H N N 407 LYS HD2 H N N 408 LYS HD3 H N N 409 LYS HE2 H N N 410 LYS HE3 H N N 411 LYS HZ1 H N N 412 LYS HZ2 H N N 413 LYS HZ3 H N N 414 LYS HXT H N N 415 MET N N N N 416 MET CA C N S 417 MET C C N N 418 MET O O N N 419 MET CB C N N 420 MET CG C N N 421 MET SD S N N 422 MET CE C N N 423 MET OXT O N N 424 MET H H N N 425 MET H2 H N N 426 MET HA H N N 427 MET HB2 H N N 428 MET HB3 H N N 429 MET HG2 H N N 430 MET HG3 H N N 431 MET HE1 H N N 432 MET HE2 H N N 433 MET HE3 H N N 434 MET HXT H N N 435 PEG C1 C N N 436 PEG O1 O N N 437 PEG C2 C N N 438 PEG O2 O N N 439 PEG C3 C N N 440 PEG C4 C N N 441 PEG O4 O N N 442 PEG H11 H N N 443 PEG H12 H N N 444 PEG HO1 H N N 445 PEG H21 H N N 446 PEG H22 H N N 447 PEG H31 H N N 448 PEG H32 H N N 449 PEG H41 H N N 450 PEG H42 H N N 451 PEG HO4 H N N 452 PHE N N N N 453 PHE CA C N S 454 PHE C C N N 455 PHE O O N N 456 PHE CB C N N 457 PHE CG C Y N 458 PHE CD1 C Y N 459 PHE CD2 C Y N 460 PHE CE1 C Y N 461 PHE CE2 C Y N 462 PHE CZ C Y N 463 PHE OXT O N N 464 PHE H H N N 465 PHE H2 H N N 466 PHE HA H N N 467 PHE HB2 H N N 468 PHE HB3 H N N 469 PHE HD1 H N N 470 PHE HD2 H N N 471 PHE HE1 H N N 472 PHE HE2 H N N 473 PHE HZ H N N 474 PHE HXT H N N 475 PRO N N N N 476 PRO CA C N S 477 PRO C C N N 478 PRO O O N N 479 PRO CB C N N 480 PRO CG C N N 481 PRO CD C N N 482 PRO OXT O N N 483 PRO H H N N 484 PRO HA H N N 485 PRO HB2 H N N 486 PRO HB3 H N N 487 PRO HG2 H N N 488 PRO HG3 H N N 489 PRO HD2 H N N 490 PRO HD3 H N N 491 PRO HXT H N N 492 SER N N N N 493 SER CA C N S 494 SER C C N N 495 SER O O N N 496 SER CB C N N 497 SER OG O N N 498 SER OXT O N N 499 SER H H N N 500 SER H2 H N N 501 SER HA H N N 502 SER HB2 H N N 503 SER HB3 H N N 504 SER HG H N N 505 SER HXT H N N 506 THR N N N N 507 THR CA C N S 508 THR C C N N 509 THR O O N N 510 THR CB C N R 511 THR OG1 O N N 512 THR CG2 C N N 513 THR OXT O N N 514 THR H H N N 515 THR H2 H N N 516 THR HA H N N 517 THR HB H N N 518 THR HG1 H N N 519 THR HG21 H N N 520 THR HG22 H N N 521 THR HG23 H N N 522 THR HXT H N N 523 TRP N N N N 524 TRP CA C N S 525 TRP C C N N 526 TRP O O N N 527 TRP CB C N N 528 TRP CG C Y N 529 TRP CD1 C Y N 530 TRP CD2 C Y N 531 TRP NE1 N Y N 532 TRP CE2 C Y N 533 TRP CE3 C Y N 534 TRP CZ2 C Y N 535 TRP CZ3 C Y N 536 TRP CH2 C Y N 537 TRP OXT O N N 538 TRP H H N N 539 TRP H2 H N N 540 TRP HA H N N 541 TRP HB2 H N N 542 TRP HB3 H N N 543 TRP HD1 H N N 544 TRP HE1 H N N 545 TRP HE3 H N N 546 TRP HZ2 H N N 547 TRP HZ3 H N N 548 TRP HH2 H N N 549 TRP HXT H N N 550 TYR N N N N 551 TYR CA C N S 552 TYR C C N N 553 TYR O O N N 554 TYR CB C N N 555 TYR CG C Y N 556 TYR CD1 C Y N 557 TYR CD2 C Y N 558 TYR CE1 C Y N 559 TYR CE2 C Y N 560 TYR CZ C Y N 561 TYR OH O N N 562 TYR OXT O N N 563 TYR H H N N 564 TYR H2 H N N 565 TYR HA H N N 566 TYR HB2 H N N 567 TYR HB3 H N N 568 TYR HD1 H N N 569 TYR HD2 H N N 570 TYR HE1 H N N 571 TYR HE2 H N N 572 TYR HH H N N 573 TYR HXT H N N 574 VAL N N N N 575 VAL CA C N S 576 VAL C C N N 577 VAL O O N N 578 VAL CB C N N 579 VAL CG1 C N N 580 VAL CG2 C N N 581 VAL OXT O N N 582 VAL H H N N 583 VAL H2 H N N 584 VAL HA H N N 585 VAL HB H N N 586 VAL HG11 H N N 587 VAL HG12 H N N 588 VAL HG13 H N N 589 VAL HG21 H N N 590 VAL HG22 H N N 591 VAL HG23 H N N 592 VAL HXT H N N 593 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BRU N1 C2 sing N N 70 BRU N1 C6 sing N N 71 BRU N1 "C1'" sing N N 72 BRU C2 N3 sing N N 73 BRU C2 O2 doub N N 74 BRU N3 C4 sing N N 75 BRU N3 HN3 sing N N 76 BRU C4 C5 sing N N 77 BRU C4 O4 doub N N 78 BRU C5 C6 doub N N 79 BRU C5 BR sing N N 80 BRU C6 H6 sing N N 81 BRU "C1'" "C2'" sing N N 82 BRU "C1'" "O4'" sing N N 83 BRU "C1'" "H1'" sing N N 84 BRU "C2'" "C3'" sing N N 85 BRU "C2'" "H2'" sing N N 86 BRU "C2'" "H2''" sing N N 87 BRU "C3'" "C4'" sing N N 88 BRU "C3'" "O3'" sing N N 89 BRU "C3'" "H3'" sing N N 90 BRU "C4'" "O4'" sing N N 91 BRU "C4'" "C5'" sing N N 92 BRU "C4'" "H4'" sing N N 93 BRU "O3'" "HO3'" sing N N 94 BRU "C5'" "O5'" sing N N 95 BRU "C5'" "H5'" sing N N 96 BRU "C5'" "H5''" sing N N 97 BRU "O5'" P sing N N 98 BRU P OP1 doub N N 99 BRU P OP2 sing N N 100 BRU P OP3 sing N N 101 BRU OP2 HOP2 sing N N 102 BRU OP3 HOP3 sing N N 103 CYS N CA sing N N 104 CYS N H sing N N 105 CYS N H2 sing N N 106 CYS CA C sing N N 107 CYS CA CB sing N N 108 CYS CA HA sing N N 109 CYS C O doub N N 110 CYS C OXT sing N N 111 CYS CB SG sing N N 112 CYS CB HB2 sing N N 113 CYS CB HB3 sing N N 114 CYS SG HG sing N N 115 CYS OXT HXT sing N N 116 DA OP3 P sing N N 117 DA OP3 HOP3 sing N N 118 DA P OP1 doub N N 119 DA P OP2 sing N N 120 DA P "O5'" sing N N 121 DA OP2 HOP2 sing N N 122 DA "O5'" "C5'" sing N N 123 DA "C5'" "C4'" sing N N 124 DA "C5'" "H5'" sing N N 125 DA "C5'" "H5''" sing N N 126 DA "C4'" "O4'" sing N N 127 DA "C4'" "C3'" sing N N 128 DA "C4'" "H4'" sing N N 129 DA "O4'" "C1'" sing N N 130 DA "C3'" "O3'" sing N N 131 DA "C3'" "C2'" sing N N 132 DA "C3'" "H3'" sing N N 133 DA "O3'" "HO3'" sing N N 134 DA "C2'" "C1'" sing N N 135 DA "C2'" "H2'" sing N N 136 DA "C2'" "H2''" sing N N 137 DA "C1'" N9 sing N N 138 DA "C1'" "H1'" sing N N 139 DA N9 C8 sing Y N 140 DA N9 C4 sing Y N 141 DA C8 N7 doub Y N 142 DA C8 H8 sing N N 143 DA N7 C5 sing Y N 144 DA C5 C6 sing Y N 145 DA C5 C4 doub Y N 146 DA C6 N6 sing N N 147 DA C6 N1 doub Y N 148 DA N6 H61 sing N N 149 DA N6 H62 sing N N 150 DA N1 C2 sing Y N 151 DA C2 N3 doub Y N 152 DA C2 H2 sing N N 153 DA N3 C4 sing Y N 154 DC OP3 P sing N N 155 DC OP3 HOP3 sing N N 156 DC P OP1 doub N N 157 DC P OP2 sing N N 158 DC P "O5'" sing N N 159 DC OP2 HOP2 sing N N 160 DC "O5'" "C5'" sing N N 161 DC "C5'" "C4'" sing N N 162 DC "C5'" "H5'" sing N N 163 DC "C5'" "H5''" sing N N 164 DC "C4'" "O4'" sing N N 165 DC "C4'" "C3'" sing N N 166 DC "C4'" "H4'" sing N N 167 DC "O4'" "C1'" sing N N 168 DC "C3'" "O3'" sing N N 169 DC "C3'" "C2'" sing N N 170 DC "C3'" "H3'" sing N N 171 DC "O3'" "HO3'" sing N N 172 DC "C2'" "C1'" sing N N 173 DC "C2'" "H2'" sing N N 174 DC "C2'" "H2''" sing N N 175 DC "C1'" N1 sing N N 176 DC "C1'" "H1'" sing N N 177 DC N1 C2 sing N N 178 DC N1 C6 sing N N 179 DC C2 O2 doub N N 180 DC C2 N3 sing N N 181 DC N3 C4 doub N N 182 DC C4 N4 sing N N 183 DC C4 C5 sing N N 184 DC N4 H41 sing N N 185 DC N4 H42 sing N N 186 DC C5 C6 doub N N 187 DC C5 H5 sing N N 188 DC C6 H6 sing N N 189 DG OP3 P sing N N 190 DG OP3 HOP3 sing N N 191 DG P OP1 doub N N 192 DG P OP2 sing N N 193 DG P "O5'" sing N N 194 DG OP2 HOP2 sing N N 195 DG "O5'" "C5'" sing N N 196 DG "C5'" "C4'" sing N N 197 DG "C5'" "H5'" sing N N 198 DG "C5'" "H5''" sing N N 199 DG "C4'" "O4'" sing N N 200 DG "C4'" "C3'" sing N N 201 DG "C4'" "H4'" sing N N 202 DG "O4'" "C1'" sing N N 203 DG "C3'" "O3'" sing N N 204 DG "C3'" "C2'" sing N N 205 DG "C3'" "H3'" sing N N 206 DG "O3'" "HO3'" sing N N 207 DG "C2'" "C1'" sing N N 208 DG "C2'" "H2'" sing N N 209 DG "C2'" "H2''" sing N N 210 DG "C1'" N9 sing N N 211 DG "C1'" "H1'" sing N N 212 DG N9 C8 sing Y N 213 DG N9 C4 sing Y N 214 DG C8 N7 doub Y N 215 DG C8 H8 sing N N 216 DG N7 C5 sing Y N 217 DG C5 C6 sing N N 218 DG C5 C4 doub Y N 219 DG C6 O6 doub N N 220 DG C6 N1 sing N N 221 DG N1 C2 sing N N 222 DG N1 H1 sing N N 223 DG C2 N2 sing N N 224 DG C2 N3 doub N N 225 DG N2 H21 sing N N 226 DG N2 H22 sing N N 227 DG N3 C4 sing N N 228 DT OP3 P sing N N 229 DT OP3 HOP3 sing N N 230 DT P OP1 doub N N 231 DT P OP2 sing N N 232 DT P "O5'" sing N N 233 DT OP2 HOP2 sing N N 234 DT "O5'" "C5'" sing N N 235 DT "C5'" "C4'" sing N N 236 DT "C5'" "H5'" sing N N 237 DT "C5'" "H5''" sing N N 238 DT "C4'" "O4'" sing N N 239 DT "C4'" "C3'" sing N N 240 DT "C4'" "H4'" sing N N 241 DT "O4'" "C1'" sing N N 242 DT "C3'" "O3'" sing N N 243 DT "C3'" "C2'" sing N N 244 DT "C3'" "H3'" sing N N 245 DT "O3'" "HO3'" sing N N 246 DT "C2'" "C1'" sing N N 247 DT "C2'" "H2'" sing N N 248 DT "C2'" "H2''" sing N N 249 DT "C1'" N1 sing N N 250 DT "C1'" "H1'" sing N N 251 DT N1 C2 sing N N 252 DT N1 C6 sing N N 253 DT C2 O2 doub N N 254 DT C2 N3 sing N N 255 DT N3 C4 sing N N 256 DT N3 H3 sing N N 257 DT C4 O4 doub N N 258 DT C4 C5 sing N N 259 DT C5 C7 sing N N 260 DT C5 C6 doub N N 261 DT C7 H71 sing N N 262 DT C7 H72 sing N N 263 DT C7 H73 sing N N 264 DT C6 H6 sing N N 265 EDO C1 O1 sing N N 266 EDO C1 C2 sing N N 267 EDO C1 H11 sing N N 268 EDO C1 H12 sing N N 269 EDO O1 HO1 sing N N 270 EDO C2 O2 sing N N 271 EDO C2 H21 sing N N 272 EDO C2 H22 sing N N 273 EDO O2 HO2 sing N N 274 GLN N CA sing N N 275 GLN N H sing N N 276 GLN N H2 sing N N 277 GLN CA C sing N N 278 GLN CA CB sing N N 279 GLN CA HA sing N N 280 GLN C O doub N N 281 GLN C OXT sing N N 282 GLN CB CG sing N N 283 GLN CB HB2 sing N N 284 GLN CB HB3 sing N N 285 GLN CG CD sing N N 286 GLN CG HG2 sing N N 287 GLN CG HG3 sing N N 288 GLN CD OE1 doub N N 289 GLN CD NE2 sing N N 290 GLN NE2 HE21 sing N N 291 GLN NE2 HE22 sing N N 292 GLN OXT HXT sing N N 293 GLU N CA sing N N 294 GLU N H sing N N 295 GLU N H2 sing N N 296 GLU CA C sing N N 297 GLU CA CB sing N N 298 GLU CA HA sing N N 299 GLU C O doub N N 300 GLU C OXT sing N N 301 GLU CB CG sing N N 302 GLU CB HB2 sing N N 303 GLU CB HB3 sing N N 304 GLU CG CD sing N N 305 GLU CG HG2 sing N N 306 GLU CG HG3 sing N N 307 GLU CD OE1 doub N N 308 GLU CD OE2 sing N N 309 GLU OE2 HE2 sing N N 310 GLU OXT HXT sing N N 311 GLY N CA sing N N 312 GLY N H sing N N 313 GLY N H2 sing N N 314 GLY CA C sing N N 315 GLY CA HA2 sing N N 316 GLY CA HA3 sing N N 317 GLY C O doub N N 318 GLY C OXT sing N N 319 GLY OXT HXT sing N N 320 HIS N CA sing N N 321 HIS N H sing N N 322 HIS N H2 sing N N 323 HIS CA C sing N N 324 HIS CA CB sing N N 325 HIS CA HA sing N N 326 HIS C O doub N N 327 HIS C OXT sing N N 328 HIS CB CG sing N N 329 HIS CB HB2 sing N N 330 HIS CB HB3 sing N N 331 HIS CG ND1 sing Y N 332 HIS CG CD2 doub Y N 333 HIS ND1 CE1 doub Y N 334 HIS ND1 HD1 sing N N 335 HIS CD2 NE2 sing Y N 336 HIS CD2 HD2 sing N N 337 HIS CE1 NE2 sing Y N 338 HIS CE1 HE1 sing N N 339 HIS NE2 HE2 sing N N 340 HIS OXT HXT sing N N 341 HOH O H1 sing N N 342 HOH O H2 sing N N 343 ILE N CA sing N N 344 ILE N H sing N N 345 ILE N H2 sing N N 346 ILE CA C sing N N 347 ILE CA CB sing N N 348 ILE CA HA sing N N 349 ILE C O doub N N 350 ILE C OXT sing N N 351 ILE CB CG1 sing N N 352 ILE CB CG2 sing N N 353 ILE CB HB sing N N 354 ILE CG1 CD1 sing N N 355 ILE CG1 HG12 sing N N 356 ILE CG1 HG13 sing N N 357 ILE CG2 HG21 sing N N 358 ILE CG2 HG22 sing N N 359 ILE CG2 HG23 sing N N 360 ILE CD1 HD11 sing N N 361 ILE CD1 HD12 sing N N 362 ILE CD1 HD13 sing N N 363 ILE OXT HXT sing N N 364 LEU N CA sing N N 365 LEU N H sing N N 366 LEU N H2 sing N N 367 LEU CA C sing N N 368 LEU CA CB sing N N 369 LEU CA HA sing N N 370 LEU C O doub N N 371 LEU C OXT sing N N 372 LEU CB CG sing N N 373 LEU CB HB2 sing N N 374 LEU CB HB3 sing N N 375 LEU CG CD1 sing N N 376 LEU CG CD2 sing N N 377 LEU CG HG sing N N 378 LEU CD1 HD11 sing N N 379 LEU CD1 HD12 sing N N 380 LEU CD1 HD13 sing N N 381 LEU CD2 HD21 sing N N 382 LEU CD2 HD22 sing N N 383 LEU CD2 HD23 sing N N 384 LEU OXT HXT sing N N 385 LYS N CA sing N N 386 LYS N H sing N N 387 LYS N H2 sing N N 388 LYS CA C sing N N 389 LYS CA CB sing N N 390 LYS CA HA sing N N 391 LYS C O doub N N 392 LYS C OXT sing N N 393 LYS CB CG sing N N 394 LYS CB HB2 sing N N 395 LYS CB HB3 sing N N 396 LYS CG CD sing N N 397 LYS CG HG2 sing N N 398 LYS CG HG3 sing N N 399 LYS CD CE sing N N 400 LYS CD HD2 sing N N 401 LYS CD HD3 sing N N 402 LYS CE NZ sing N N 403 LYS CE HE2 sing N N 404 LYS CE HE3 sing N N 405 LYS NZ HZ1 sing N N 406 LYS NZ HZ2 sing N N 407 LYS NZ HZ3 sing N N 408 LYS OXT HXT sing N N 409 MET N CA sing N N 410 MET N H sing N N 411 MET N H2 sing N N 412 MET CA C sing N N 413 MET CA CB sing N N 414 MET CA HA sing N N 415 MET C O doub N N 416 MET C OXT sing N N 417 MET CB CG sing N N 418 MET CB HB2 sing N N 419 MET CB HB3 sing N N 420 MET CG SD sing N N 421 MET CG HG2 sing N N 422 MET CG HG3 sing N N 423 MET SD CE sing N N 424 MET CE HE1 sing N N 425 MET CE HE2 sing N N 426 MET CE HE3 sing N N 427 MET OXT HXT sing N N 428 PEG C1 O1 sing N N 429 PEG C1 C2 sing N N 430 PEG C1 H11 sing N N 431 PEG C1 H12 sing N N 432 PEG O1 HO1 sing N N 433 PEG C2 O2 sing N N 434 PEG C2 H21 sing N N 435 PEG C2 H22 sing N N 436 PEG O2 C3 sing N N 437 PEG C3 C4 sing N N 438 PEG C3 H31 sing N N 439 PEG C3 H32 sing N N 440 PEG C4 O4 sing N N 441 PEG C4 H41 sing N N 442 PEG C4 H42 sing N N 443 PEG O4 HO4 sing N N 444 PHE N CA sing N N 445 PHE N H sing N N 446 PHE N H2 sing N N 447 PHE CA C sing N N 448 PHE CA CB sing N N 449 PHE CA HA sing N N 450 PHE C O doub N N 451 PHE C OXT sing N N 452 PHE CB CG sing N N 453 PHE CB HB2 sing N N 454 PHE CB HB3 sing N N 455 PHE CG CD1 doub Y N 456 PHE CG CD2 sing Y N 457 PHE CD1 CE1 sing Y N 458 PHE CD1 HD1 sing N N 459 PHE CD2 CE2 doub Y N 460 PHE CD2 HD2 sing N N 461 PHE CE1 CZ doub Y N 462 PHE CE1 HE1 sing N N 463 PHE CE2 CZ sing Y N 464 PHE CE2 HE2 sing N N 465 PHE CZ HZ sing N N 466 PHE OXT HXT sing N N 467 PRO N CA sing N N 468 PRO N CD sing N N 469 PRO N H sing N N 470 PRO CA C sing N N 471 PRO CA CB sing N N 472 PRO CA HA sing N N 473 PRO C O doub N N 474 PRO C OXT sing N N 475 PRO CB CG sing N N 476 PRO CB HB2 sing N N 477 PRO CB HB3 sing N N 478 PRO CG CD sing N N 479 PRO CG HG2 sing N N 480 PRO CG HG3 sing N N 481 PRO CD HD2 sing N N 482 PRO CD HD3 sing N N 483 PRO OXT HXT sing N N 484 SER N CA sing N N 485 SER N H sing N N 486 SER N H2 sing N N 487 SER CA C sing N N 488 SER CA CB sing N N 489 SER CA HA sing N N 490 SER C O doub N N 491 SER C OXT sing N N 492 SER CB OG sing N N 493 SER CB HB2 sing N N 494 SER CB HB3 sing N N 495 SER OG HG sing N N 496 SER OXT HXT sing N N 497 THR N CA sing N N 498 THR N H sing N N 499 THR N H2 sing N N 500 THR CA C sing N N 501 THR CA CB sing N N 502 THR CA HA sing N N 503 THR C O doub N N 504 THR C OXT sing N N 505 THR CB OG1 sing N N 506 THR CB CG2 sing N N 507 THR CB HB sing N N 508 THR OG1 HG1 sing N N 509 THR CG2 HG21 sing N N 510 THR CG2 HG22 sing N N 511 THR CG2 HG23 sing N N 512 THR OXT HXT sing N N 513 TRP N CA sing N N 514 TRP N H sing N N 515 TRP N H2 sing N N 516 TRP CA C sing N N 517 TRP CA CB sing N N 518 TRP CA HA sing N N 519 TRP C O doub N N 520 TRP C OXT sing N N 521 TRP CB CG sing N N 522 TRP CB HB2 sing N N 523 TRP CB HB3 sing N N 524 TRP CG CD1 doub Y N 525 TRP CG CD2 sing Y N 526 TRP CD1 NE1 sing Y N 527 TRP CD1 HD1 sing N N 528 TRP CD2 CE2 doub Y N 529 TRP CD2 CE3 sing Y N 530 TRP NE1 CE2 sing Y N 531 TRP NE1 HE1 sing N N 532 TRP CE2 CZ2 sing Y N 533 TRP CE3 CZ3 doub Y N 534 TRP CE3 HE3 sing N N 535 TRP CZ2 CH2 doub Y N 536 TRP CZ2 HZ2 sing N N 537 TRP CZ3 CH2 sing Y N 538 TRP CZ3 HZ3 sing N N 539 TRP CH2 HH2 sing N N 540 TRP OXT HXT sing N N 541 TYR N CA sing N N 542 TYR N H sing N N 543 TYR N H2 sing N N 544 TYR CA C sing N N 545 TYR CA CB sing N N 546 TYR CA HA sing N N 547 TYR C O doub N N 548 TYR C OXT sing N N 549 TYR CB CG sing N N 550 TYR CB HB2 sing N N 551 TYR CB HB3 sing N N 552 TYR CG CD1 doub Y N 553 TYR CG CD2 sing Y N 554 TYR CD1 CE1 sing Y N 555 TYR CD1 HD1 sing N N 556 TYR CD2 CE2 doub Y N 557 TYR CD2 HD2 sing N N 558 TYR CE1 CZ doub Y N 559 TYR CE1 HE1 sing N N 560 TYR CE2 CZ sing Y N 561 TYR CE2 HE2 sing N N 562 TYR CZ OH sing N N 563 TYR OH HH sing N N 564 TYR OXT HXT sing N N 565 VAL N CA sing N N 566 VAL N H sing N N 567 VAL N H2 sing N N 568 VAL CA C sing N N 569 VAL CA CB sing N N 570 VAL CA HA sing N N 571 VAL C O doub N N 572 VAL C OXT sing N N 573 VAL CB CG1 sing N N 574 VAL CB CG2 sing N N 575 VAL CB HB sing N N 576 VAL CG1 HG11 sing N N 577 VAL CG1 HG12 sing N N 578 VAL CG1 HG13 sing N N 579 VAL CG2 HG21 sing N N 580 VAL CG2 HG22 sing N N 581 VAL CG2 HG23 sing N N 582 VAL OXT HXT sing N N 583 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1DP7 'a-form double helix' 1DP7 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 16 2_757 0.171 -0.143 0.033 0.467 2.340 2.084 1 D_DC1:DG16_D D 1 ? D 16 ? 19 1 1 A DG 2 1_555 A DC 15 2_757 -0.299 -0.181 0.182 2.971 -18.248 0.878 2 D_DG2:DC15_D D 2 ? D 15 ? 19 1 1 A BRU 3 1_555 A DA 14 2_757 -0.262 -0.193 0.000 -6.022 -10.398 -4.914 3 D_BRU3:DA14_D D 3 ? D 14 ? 20 1 1 A DT 4 1_555 A DA 13 2_757 -0.030 -0.221 -0.147 -6.740 -18.236 3.782 4 D_DT4:DA13_D D 4 ? D 13 ? 20 1 1 A DA 5 1_555 A DT 12 2_757 0.213 -0.140 -0.154 -9.213 -2.566 -0.539 5 D_DA5:DT12_D D 5 ? D 12 ? 20 1 1 A DC 6 1_555 A DG 11 2_757 0.207 -0.171 -0.052 -0.217 -1.121 -2.663 6 D_DC6:DG11_D D 6 ? D 11 ? 19 1 1 A DC 7 1_555 A DG 10 2_757 0.220 -0.151 -0.013 -2.555 -8.833 0.402 7 D_DC7:DG10_D D 7 ? D 10 ? 19 1 1 A DA 8 1_555 A BRU 9 2_757 -0.158 -0.166 0.322 -0.477 -16.676 8.215 8 D_DA8:BRU9_D D 8 ? D 9 ? 20 1 1 A BRU 9 1_555 A DA 8 2_757 0.158 -0.166 0.322 0.477 -16.676 8.215 9 D_BRU9:DA8_D D 9 ? D 8 ? 20 1 1 A DG 10 1_555 A DC 7 2_757 -0.220 -0.151 -0.013 2.555 -8.833 0.402 10 D_DG10:DC7_D D 10 ? D 7 ? 19 1 1 A DG 11 1_555 A DC 6 2_757 -0.207 -0.171 -0.052 0.217 -1.121 -2.663 11 D_DG11:DC6_D D 11 ? D 6 ? 19 1 1 A DT 12 1_555 A DA 5 2_757 -0.213 -0.140 -0.154 9.213 -2.566 -0.539 12 D_DT12:DA5_D D 12 ? D 5 ? 20 1 1 A DA 13 1_555 A DT 4 2_757 0.030 -0.221 -0.147 6.740 -18.236 3.782 13 D_DA13:DT4_D D 13 ? D 4 ? 20 1 1 A DA 14 1_555 A BRU 3 2_757 0.262 -0.193 0.000 6.022 -10.398 -4.914 14 D_DA14:BRU3_D D 14 ? D 3 ? 20 1 1 A DC 15 1_555 A DG 2 2_757 0.299 -0.181 0.182 -2.971 -18.248 0.878 15 D_DC15:DG2_D D 15 ? D 2 ? 19 1 1 A DG 16 1_555 A DC 1 2_757 -0.171 -0.143 0.033 -0.467 2.340 2.084 16 D_DG16:DC1_D D 16 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 16 2_757 A DG 2 1_555 A DC 15 2_757 -1.504 1.316 3.255 -4.232 3.806 34.952 1.580 1.824 3.527 6.286 6.989 35.398 1 DD_DC1DG2:DC15DG16_DD D 1 ? D 16 ? D 2 ? D 15 ? 1 A DG 2 1_555 A DC 15 2_757 A BRU 3 1_555 A DA 14 2_757 0.703 -0.007 3.405 2.156 0.927 39.913 -0.122 -0.770 3.436 1.356 -3.155 39.979 2 DD_DG2BRU3:DA14DC15_DD D 2 ? D 15 ? D 3 ? D 14 ? 1 A BRU 3 1_555 A DA 14 2_757 A DT 4 1_555 A DA 13 2_757 -0.185 0.018 3.220 1.284 2.811 32.269 -0.455 0.554 3.200 5.044 -2.304 32.413 3 DD_BRU3DT4:DA13DA14_DD D 3 ? D 14 ? D 4 ? D 13 ? 1 A DT 4 1_555 A DA 13 2_757 A DA 5 1_555 A DT 12 2_757 -0.212 0.972 3.364 -0.574 6.061 42.703 0.697 0.229 3.466 8.273 0.783 43.115 4 DD_DT4DA5:DT12DA13_DD D 4 ? D 13 ? D 5 ? D 12 ? 1 A DA 5 1_555 A DT 12 2_757 A DC 6 1_555 A DG 11 2_757 0.621 0.457 3.099 -0.590 4.782 28.466 -0.102 -1.372 3.119 9.638 1.188 28.863 5 DD_DA5DC6:DG11DT12_DD D 5 ? D 12 ? D 6 ? D 11 ? 1 A DC 6 1_555 A DG 11 2_757 A DC 7 1_555 A DG 10 2_757 1.292 -0.162 3.269 1.845 1.787 36.632 -0.502 -1.797 3.317 2.839 -2.932 36.718 6 DD_DC6DC7:DG10DG11_DD D 6 ? D 11 ? D 7 ? D 10 ? 1 A DC 7 1_555 A DG 10 2_757 A DA 8 1_555 A BRU 9 2_757 0.485 -1.200 3.098 -1.821 12.649 29.916 -4.083 -1.145 2.376 23.216 3.343 32.474 7 DD_DC7DA8:BRU9DG10_DD D 7 ? D 10 ? D 8 ? D 9 ? 1 A DA 8 1_555 A BRU 9 2_757 A BRU 9 1_555 A DA 8 2_757 0.000 -1.096 3.247 0.000 4.491 35.980 -2.374 0.000 3.092 7.235 0.000 36.250 8 DD_DA8BRU9:DA8BRU9_DD D 8 ? D 9 ? D 9 ? D 8 ? 1 A BRU 9 1_555 A DA 8 2_757 A DG 10 1_555 A DC 7 2_757 -0.485 -1.200 3.098 1.821 12.649 29.916 -4.083 1.145 2.376 23.216 -3.343 32.474 9 DD_BRU9DG10:DC7DA8_DD D 9 ? D 8 ? D 10 ? D 7 ? 1 A DG 10 1_555 A DC 7 2_757 A DG 11 1_555 A DC 6 2_757 -1.292 -0.162 3.269 -1.845 1.787 36.632 -0.502 1.797 3.317 2.839 2.932 36.718 10 DD_DG10DG11:DC6DC7_DD D 10 ? D 7 ? D 11 ? D 6 ? 1 A DG 11 1_555 A DC 6 2_757 A DT 12 1_555 A DA 5 2_757 -0.621 0.457 3.099 0.590 4.782 28.466 -0.102 1.372 3.119 9.638 -1.188 28.862 11 DD_DG11DT12:DA5DC6_DD D 11 ? D 6 ? D 12 ? D 5 ? 1 A DT 12 1_555 A DA 5 2_757 A DA 13 1_555 A DT 4 2_757 0.212 0.972 3.364 0.574 6.061 42.703 0.697 -0.229 3.466 8.273 -0.783 43.115 12 DD_DT12DA13:DT4DA5_DD D 12 ? D 5 ? D 13 ? D 4 ? 1 A DA 13 1_555 A DT 4 2_757 A DA 14 1_555 A BRU 3 2_757 0.185 0.018 3.220 -1.284 2.811 32.269 -0.455 -0.554 3.200 5.044 2.304 32.413 13 DD_DA13DA14:BRU3DT4_DD D 13 ? D 4 ? D 14 ? D 3 ? 1 A DA 14 1_555 A BRU 3 2_757 A DC 15 1_555 A DG 2 2_757 -0.703 -0.007 3.405 -2.156 0.927 39.913 -0.122 0.770 3.436 1.356 3.155 39.979 14 DD_DA14DC15:DG2BRU3_DD D 14 ? D 3 ? D 15 ? D 2 ? 1 A DC 15 1_555 A DG 2 2_757 A DG 16 1_555 A DC 1 2_757 1.504 1.316 3.255 4.232 3.806 34.952 1.580 -1.824 3.527 6.286 -6.989 35.398 15 DD_DC15DG16:DC1DG2_DD D 15 ? D 2 ? D 16 ? D 1 ? # _atom_sites.entry_id 1DP7 _atom_sites.fract_transf_matrix[1][1] 0.013728 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004783 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023391 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020257 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O P S # loop_