data_1DSF # _entry.id 1DSF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DSF pdb_00001dsf 10.2210/pdb1dsf/pdb WWPDB D_1000172921 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-05-13 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DSF _pdbx_database_status.recvd_initial_deposition_date 1997-05-04 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Almog, O.' 1 'Gilliland, G.L.' 2 # _citation.id primary _citation.title ;Crystal structure of the disulfide-stabilized Fv fragment of anticancer antibody B1: conformational influence of an engineered disulfide bond. ; _citation.journal_abbrev Proteins _citation.journal_volume 31 _citation.page_first 128 _citation.page_last 138 _citation.year 1998 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9593187 _citation.pdbx_database_id_DOI '10.1002/(SICI)1097-0134(19980501)31:2<128::AID-PROT3>3.3.CO;2-D' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Almog, O.' 1 ? primary 'Benhar, I.' 2 ? primary 'Vasmatzis, G.' 3 ? primary 'Tordova, M.' 4 ? primary 'Lee, B.' 5 ? primary 'Pastan, I.' 6 ? primary 'Gilliland, G.L.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ANTICANCER ANTIBODY B1' 12223.854 1 ? 'CHAIN L, A100C, CHAIN H, R44C' FV ? 2 polymer man 'ANTICANCER ANTIBODY B1' 13248.775 1 ? 'CHAIN L, A100C, CHAIN H, R44C' FV ? 3 water nat water 18.015 180 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 B1DSFV 2 B1DSFV # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;DVVMTQTPLSLPVSLGDQASISCRSSQNLVHSDGKTYLHWFLQKPGQSPTLLIYKVSNRFSGVPDRFSGSGSGTDFILKI SRVEAEDLGVYFCSQSTHVPLTFGCGTKLELK ; ;DVVMTQTPLSLPVSLGDQASISCRSSQNLVHSDGKTYLHWFLQKPGQSPTLLIYKVSNRFSGVPDRFSGSGSGTDFILKI SRVEAEDLGVYFCSQSTHVPLTFGCGTKLELK ; L ? 2 'polypeptide(L)' no no ;QLVESGGGLVKPGGSLKLSCAASGFIFSDNYMYWVRQTPEKCLEWVATISDGGTYIDYSDSVKGRFTISRDNAKNNLYLQ MSSLRSEDTGMYYCGRSPIYYDYAPFTYWGQGTLVTVSA ; ;QLVESGGGLVKPGGSLKLSCAASGFIFSDNYMYWVRQTPEKCLEWVATISDGGTYIDYSDSVKGRFTISRDNAKNNLYLQ MSSLRSEDTGMYYCGRSPIYYDYAPFTYWGQGTLVTVSA ; H ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 VAL n 1 3 VAL n 1 4 MET n 1 5 THR n 1 6 GLN n 1 7 THR n 1 8 PRO n 1 9 LEU n 1 10 SER n 1 11 LEU n 1 12 PRO n 1 13 VAL n 1 14 SER n 1 15 LEU n 1 16 GLY n 1 17 ASP n 1 18 GLN n 1 19 ALA n 1 20 SER n 1 21 ILE n 1 22 SER n 1 23 CYS n 1 24 ARG n 1 25 SER n 1 26 SER n 1 27 GLN n 1 28 ASN n 1 29 LEU n 1 30 VAL n 1 31 HIS n 1 32 SER n 1 33 ASP n 1 34 GLY n 1 35 LYS n 1 36 THR n 1 37 TYR n 1 38 LEU n 1 39 HIS n 1 40 TRP n 1 41 PHE n 1 42 LEU n 1 43 GLN n 1 44 LYS n 1 45 PRO n 1 46 GLY n 1 47 GLN n 1 48 SER n 1 49 PRO n 1 50 THR n 1 51 LEU n 1 52 LEU n 1 53 ILE n 1 54 TYR n 1 55 LYS n 1 56 VAL n 1 57 SER n 1 58 ASN n 1 59 ARG n 1 60 PHE n 1 61 SER n 1 62 GLY n 1 63 VAL n 1 64 PRO n 1 65 ASP n 1 66 ARG n 1 67 PHE n 1 68 SER n 1 69 GLY n 1 70 SER n 1 71 GLY n 1 72 SER n 1 73 GLY n 1 74 THR n 1 75 ASP n 1 76 PHE n 1 77 ILE n 1 78 LEU n 1 79 LYS n 1 80 ILE n 1 81 SER n 1 82 ARG n 1 83 VAL n 1 84 GLU n 1 85 ALA n 1 86 GLU n 1 87 ASP n 1 88 LEU n 1 89 GLY n 1 90 VAL n 1 91 TYR n 1 92 PHE n 1 93 CYS n 1 94 SER n 1 95 GLN n 1 96 SER n 1 97 THR n 1 98 HIS n 1 99 VAL n 1 100 PRO n 1 101 LEU n 1 102 THR n 1 103 PHE n 1 104 GLY n 1 105 CYS n 1 106 GLY n 1 107 THR n 1 108 LYS n 1 109 LEU n 1 110 GLU n 1 111 LEU n 1 112 LYS n 2 1 GLN n 2 2 LEU n 2 3 VAL n 2 4 GLU n 2 5 SER n 2 6 GLY n 2 7 GLY n 2 8 GLY n 2 9 LEU n 2 10 VAL n 2 11 LYS n 2 12 PRO n 2 13 GLY n 2 14 GLY n 2 15 SER n 2 16 LEU n 2 17 LYS n 2 18 LEU n 2 19 SER n 2 20 CYS n 2 21 ALA n 2 22 ALA n 2 23 SER n 2 24 GLY n 2 25 PHE n 2 26 ILE n 2 27 PHE n 2 28 SER n 2 29 ASP n 2 30 ASN n 2 31 TYR n 2 32 MET n 2 33 TYR n 2 34 TRP n 2 35 VAL n 2 36 ARG n 2 37 GLN n 2 38 THR n 2 39 PRO n 2 40 GLU n 2 41 LYS n 2 42 CYS n 2 43 LEU n 2 44 GLU n 2 45 TRP n 2 46 VAL n 2 47 ALA n 2 48 THR n 2 49 ILE n 2 50 SER n 2 51 ASP n 2 52 GLY n 2 53 GLY n 2 54 THR n 2 55 TYR n 2 56 ILE n 2 57 ASP n 2 58 TYR n 2 59 SER n 2 60 ASP n 2 61 SER n 2 62 VAL n 2 63 LYS n 2 64 GLY n 2 65 ARG n 2 66 PHE n 2 67 THR n 2 68 ILE n 2 69 SER n 2 70 ARG n 2 71 ASP n 2 72 ASN n 2 73 ALA n 2 74 LYS n 2 75 ASN n 2 76 ASN n 2 77 LEU n 2 78 TYR n 2 79 LEU n 2 80 GLN n 2 81 MET n 2 82 SER n 2 83 SER n 2 84 LEU n 2 85 ARG n 2 86 SER n 2 87 GLU n 2 88 ASP n 2 89 THR n 2 90 GLY n 2 91 MET n 2 92 TYR n 2 93 TYR n 2 94 CYS n 2 95 GLY n 2 96 ARG n 2 97 SER n 2 98 PRO n 2 99 ILE n 2 100 TYR n 2 101 TYR n 2 102 ASP n 2 103 TYR n 2 104 ALA n 2 105 PRO n 2 106 PHE n 2 107 THR n 2 108 TYR n 2 109 TRP n 2 110 GLY n 2 111 GLN n 2 112 GLY n 2 113 THR n 2 114 LEU n 2 115 VAL n 2 116 THR n 2 117 VAL n 2 118 SER n 2 119 ALA n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'house mouse' Mus ? ? BALB/C ? ? ? ? 'Mus musculus' 10090 ? BL21 ? SPLEEN ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21 (DE3)' ? ? ? ? ? ? CYTOPLASM PLASMID 'PB1VH R44C-STOP PB1VL A100C-STOP' ? ? 'PB1VHR44C-STOP\ PB1VL A100C-STOP' ? ? 2 1 sample ? ? ? 'house mouse' Mus ? ? BALB/C ? ? ? ? 'Mus musculus' 10090 ? BL21 ? SPLEEN ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21 (DE3)' ? ? ? ? ? ? CYTOPLASM PLASMID 'PB1VH R44C-STOP PB1VL A100C-STOP' ? ? 'PB1VHR44C-STOP\ PB1VL A100C-STOP' ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP L . n A 1 2 VAL 2 2 2 VAL VAL L . n A 1 3 VAL 3 3 3 VAL VAL L . n A 1 4 MET 4 4 4 MET MET L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 THR 7 7 7 THR THR L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 LEU 9 9 9 LEU LEU L . n A 1 10 SER 10 10 10 SER SER L . n A 1 11 LEU 11 11 11 LEU LEU L . n A 1 12 PRO 12 12 12 PRO PRO L . n A 1 13 VAL 13 13 13 VAL VAL L . n A 1 14 SER 14 14 14 SER SER L . n A 1 15 LEU 15 15 15 LEU LEU L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 ASP 17 17 17 ASP ASP L . n A 1 18 GLN 18 18 18 GLN GLN L . n A 1 19 ALA 19 19 19 ALA ALA L . n A 1 20 SER 20 20 20 SER SER L . n A 1 21 ILE 21 21 21 ILE ILE L . n A 1 22 SER 22 22 22 SER SER L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 ARG 24 24 24 ARG ARG L . n A 1 25 SER 25 25 25 SER SER L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 GLN 27 27 27 GLN GLN L . n A 1 28 ASN 28 27 27 ASN ASN L A n A 1 29 LEU 29 27 27 LEU LEU L B n A 1 30 VAL 30 27 27 VAL VAL L C n A 1 31 HIS 31 27 27 HIS HIS L D n A 1 32 SER 32 27 27 SER SER L E n A 1 33 ASP 33 28 28 ASP ASP L . n A 1 34 GLY 34 29 29 GLY GLY L . n A 1 35 LYS 35 30 30 LYS LYS L . n A 1 36 THR 36 31 31 THR THR L . n A 1 37 TYR 37 32 32 TYR TYR L . n A 1 38 LEU 38 33 33 LEU LEU L . n A 1 39 HIS 39 34 34 HIS HIS L . n A 1 40 TRP 40 35 35 TRP TRP L . n A 1 41 PHE 41 36 36 PHE PHE L . n A 1 42 LEU 42 37 37 LEU LEU L . n A 1 43 GLN 43 38 38 GLN GLN L . n A 1 44 LYS 44 39 39 LYS LYS L . n A 1 45 PRO 45 40 40 PRO PRO L . n A 1 46 GLY 46 41 41 GLY GLY L . n A 1 47 GLN 47 42 42 GLN GLN L . n A 1 48 SER 48 43 43 SER SER L . n A 1 49 PRO 49 44 44 PRO PRO L . n A 1 50 THR 50 45 45 THR THR L . n A 1 51 LEU 51 46 46 LEU LEU L . n A 1 52 LEU 52 47 47 LEU LEU L . n A 1 53 ILE 53 48 48 ILE ILE L . n A 1 54 TYR 54 49 49 TYR TYR L . n A 1 55 LYS 55 50 50 LYS LYS L . n A 1 56 VAL 56 51 51 VAL VAL L . n A 1 57 SER 57 52 52 SER SER L . n A 1 58 ASN 58 53 53 ASN ASN L . n A 1 59 ARG 59 54 54 ARG ARG L . n A 1 60 PHE 60 55 55 PHE PHE L . n A 1 61 SER 61 56 56 SER SER L . n A 1 62 GLY 62 57 57 GLY GLY L . n A 1 63 VAL 63 58 58 VAL VAL L . n A 1 64 PRO 64 59 59 PRO PRO L . n A 1 65 ASP 65 60 60 ASP ASP L . n A 1 66 ARG 66 61 61 ARG ARG L . n A 1 67 PHE 67 62 62 PHE PHE L . n A 1 68 SER 68 63 63 SER SER L . n A 1 69 GLY 69 64 64 GLY GLY L . n A 1 70 SER 70 65 65 SER SER L . n A 1 71 GLY 71 66 66 GLY GLY L . n A 1 72 SER 72 67 67 SER SER L . n A 1 73 GLY 73 68 68 GLY GLY L . n A 1 74 THR 74 69 69 THR THR L . n A 1 75 ASP 75 70 70 ASP ASP L . n A 1 76 PHE 76 71 71 PHE PHE L . n A 1 77 ILE 77 72 72 ILE ILE L . n A 1 78 LEU 78 73 73 LEU LEU L . n A 1 79 LYS 79 74 74 LYS LYS L . n A 1 80 ILE 80 75 75 ILE ILE L . n A 1 81 SER 81 76 76 SER SER L . n A 1 82 ARG 82 77 77 ARG ARG L . n A 1 83 VAL 83 78 78 VAL VAL L . n A 1 84 GLU 84 79 79 GLU GLU L . n A 1 85 ALA 85 80 80 ALA ALA L . n A 1 86 GLU 86 81 81 GLU GLU L . n A 1 87 ASP 87 82 82 ASP ASP L . n A 1 88 LEU 88 83 83 LEU LEU L . n A 1 89 GLY 89 84 84 GLY GLY L . n A 1 90 VAL 90 85 85 VAL VAL L . n A 1 91 TYR 91 86 86 TYR TYR L . n A 1 92 PHE 92 87 87 PHE PHE L . n A 1 93 CYS 93 88 88 CYS CYS L . n A 1 94 SER 94 89 89 SER SER L . n A 1 95 GLN 95 90 90 GLN GLN L . n A 1 96 SER 96 91 91 SER SER L . n A 1 97 THR 97 92 92 THR THR L . n A 1 98 HIS 98 93 93 HIS HIS L . n A 1 99 VAL 99 94 94 VAL VAL L . n A 1 100 PRO 100 95 95 PRO PRO L . n A 1 101 LEU 101 96 96 LEU LEU L . n A 1 102 THR 102 97 97 THR THR L . n A 1 103 PHE 103 98 98 PHE PHE L . n A 1 104 GLY 104 99 99 GLY GLY L . n A 1 105 CYS 105 100 100 CYS CYS L . n A 1 106 GLY 106 101 101 GLY GLY L . n A 1 107 THR 107 102 102 THR THR L . n A 1 108 LYS 108 103 103 LYS LYS L . n A 1 109 LEU 109 104 104 LEU LEU L . n A 1 110 GLU 110 105 105 GLU GLU L . n A 1 111 LEU 111 106 106 LEU LEU L . n A 1 112 LYS 112 107 107 LYS LYS L . n B 2 1 GLN 1 3 3 GLN GLN H . n B 2 2 LEU 2 4 4 LEU LEU H . n B 2 3 VAL 3 5 5 VAL VAL H . n B 2 4 GLU 4 6 6 GLU GLU H . n B 2 5 SER 5 7 7 SER SER H . n B 2 6 GLY 6 8 8 GLY GLY H . n B 2 7 GLY 7 9 9 GLY GLY H . n B 2 8 GLY 8 10 10 GLY GLY H . n B 2 9 LEU 9 11 11 LEU LEU H . n B 2 10 VAL 10 12 12 VAL VAL H . n B 2 11 LYS 11 13 13 LYS LYS H . n B 2 12 PRO 12 14 14 PRO PRO H . n B 2 13 GLY 13 15 15 GLY GLY H . n B 2 14 GLY 14 16 16 GLY GLY H . n B 2 15 SER 15 17 17 SER SER H . n B 2 16 LEU 16 18 18 LEU LEU H . n B 2 17 LYS 17 19 19 LYS LYS H . n B 2 18 LEU 18 20 20 LEU LEU H . n B 2 19 SER 19 21 21 SER SER H . n B 2 20 CYS 20 22 22 CYS CYS H . n B 2 21 ALA 21 23 23 ALA ALA H . n B 2 22 ALA 22 24 24 ALA ALA H . n B 2 23 SER 23 25 25 SER SER H . n B 2 24 GLY 24 26 26 GLY GLY H . n B 2 25 PHE 25 27 27 PHE PHE H . n B 2 26 ILE 26 28 28 ILE ILE H . n B 2 27 PHE 27 29 29 PHE PHE H . n B 2 28 SER 28 30 30 SER SER H . n B 2 29 ASP 29 31 31 ASP ASP H . n B 2 30 ASN 30 32 32 ASN ASN H . n B 2 31 TYR 31 33 33 TYR TYR H . n B 2 32 MET 32 34 34 MET MET H . n B 2 33 TYR 33 35 35 TYR TYR H . n B 2 34 TRP 34 36 36 TRP TRP H . n B 2 35 VAL 35 37 37 VAL VAL H . n B 2 36 ARG 36 38 38 ARG ARG H . n B 2 37 GLN 37 39 39 GLN GLN H . n B 2 38 THR 38 40 40 THR THR H . n B 2 39 PRO 39 41 41 PRO PRO H . n B 2 40 GLU 40 42 42 GLU GLU H . n B 2 41 LYS 41 43 43 LYS LYS H . n B 2 42 CYS 42 44 44 CYS CYS H . n B 2 43 LEU 43 45 45 LEU LEU H . n B 2 44 GLU 44 46 46 GLU GLU H . n B 2 45 TRP 45 47 47 TRP TRP H . n B 2 46 VAL 46 48 48 VAL VAL H . n B 2 47 ALA 47 49 49 ALA ALA H . n B 2 48 THR 48 50 50 THR THR H . n B 2 49 ILE 49 51 51 ILE ILE H . n B 2 50 SER 50 52 52 SER SER H . n B 2 51 ASP 51 52 52 ASP ASP H A n B 2 52 GLY 52 53 53 GLY GLY H . n B 2 53 GLY 53 54 54 GLY GLY H . n B 2 54 THR 54 55 55 THR THR H . n B 2 55 TYR 55 56 56 TYR TYR H . n B 2 56 ILE 56 57 57 ILE ILE H . n B 2 57 ASP 57 58 58 ASP ASP H . n B 2 58 TYR 58 59 59 TYR TYR H . n B 2 59 SER 59 60 60 SER SER H . n B 2 60 ASP 60 61 61 ASP ASP H . n B 2 61 SER 61 62 62 SER SER H . n B 2 62 VAL 62 63 63 VAL VAL H . n B 2 63 LYS 63 64 64 LYS LYS H . n B 2 64 GLY 64 65 65 GLY GLY H . n B 2 65 ARG 65 66 66 ARG ARG H . n B 2 66 PHE 66 67 67 PHE PHE H . n B 2 67 THR 67 68 68 THR THR H . n B 2 68 ILE 68 69 69 ILE ILE H . n B 2 69 SER 69 70 70 SER SER H . n B 2 70 ARG 70 71 71 ARG ARG H . n B 2 71 ASP 71 72 72 ASP ASP H . n B 2 72 ASN 72 73 73 ASN ASN H . n B 2 73 ALA 73 74 74 ALA ALA H . n B 2 74 LYS 74 75 75 LYS LYS H . n B 2 75 ASN 75 76 76 ASN ASN H . n B 2 76 ASN 76 77 77 ASN ASN H . n B 2 77 LEU 77 78 78 LEU LEU H . n B 2 78 TYR 78 79 79 TYR TYR H . n B 2 79 LEU 79 80 80 LEU LEU H . n B 2 80 GLN 80 81 81 GLN GLN H . n B 2 81 MET 81 82 82 MET MET H . n B 2 82 SER 82 82 82 SER SER H A n B 2 83 SER 83 82 82 SER SER H B n B 2 84 LEU 84 82 82 LEU LEU H C n B 2 85 ARG 85 83 83 ARG ARG H . n B 2 86 SER 86 84 84 SER SER H . n B 2 87 GLU 87 85 85 GLU GLU H . n B 2 88 ASP 88 86 86 ASP ASP H . n B 2 89 THR 89 87 87 THR THR H . n B 2 90 GLY 90 88 88 GLY GLY H . n B 2 91 MET 91 89 89 MET MET H . n B 2 92 TYR 92 90 90 TYR TYR H . n B 2 93 TYR 93 91 91 TYR TYR H . n B 2 94 CYS 94 92 92 CYS CYS H . n B 2 95 GLY 95 93 93 GLY GLY H . n B 2 96 ARG 96 94 94 ARG ARG H . n B 2 97 SER 97 95 95 SER SER H . n B 2 98 PRO 98 96 96 PRO PRO H . n B 2 99 ILE 99 97 97 ILE ILE H . n B 2 100 TYR 100 98 98 TYR TYR H . n B 2 101 TYR 101 99 99 TYR TYR H . n B 2 102 ASP 102 100 100 ASP ASP H . n B 2 103 TYR 103 100 100 TYR TYR H A n B 2 104 ALA 104 100 100 ALA ALA H B n B 2 105 PRO 105 100 100 PRO PRO H C n B 2 106 PHE 106 100 100 PHE PHE H D n B 2 107 THR 107 101 101 THR THR H . n B 2 108 TYR 108 102 102 TYR TYR H . n B 2 109 TRP 109 103 103 TRP TRP H . n B 2 110 GLY 110 104 104 GLY GLY H . n B 2 111 GLN 111 105 105 GLN GLN H . n B 2 112 GLY 112 106 106 GLY GLY H . n B 2 113 THR 113 107 107 THR THR H . n B 2 114 LEU 114 108 108 LEU LEU H . n B 2 115 VAL 115 109 109 VAL VAL H . n B 2 116 THR 116 110 110 THR THR H . n B 2 117 VAL 117 111 111 VAL VAL H . n B 2 118 SER 118 112 112 SER SER H . n B 2 119 ALA 119 113 113 ALA ALA H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 401 401 HOH HOH L . C 3 HOH 2 402 402 HOH HOH L . C 3 HOH 3 405 405 HOH HOH L . C 3 HOH 4 407 407 HOH HOH L . C 3 HOH 5 409 409 HOH HOH L . C 3 HOH 6 410 410 HOH HOH L . C 3 HOH 7 413 413 HOH HOH L . C 3 HOH 8 414 414 HOH HOH L . C 3 HOH 9 415 415 HOH HOH L . C 3 HOH 10 416 416 HOH HOH L . C 3 HOH 11 421 421 HOH HOH L . C 3 HOH 12 422 422 HOH HOH L . C 3 HOH 13 424 424 HOH HOH L . C 3 HOH 14 425 425 HOH HOH L . C 3 HOH 15 426 426 HOH HOH L . C 3 HOH 16 433 433 HOH HOH L . C 3 HOH 17 435 435 HOH HOH L . C 3 HOH 18 437 437 HOH HOH L . C 3 HOH 19 438 438 HOH HOH L . C 3 HOH 20 439 439 HOH HOH L . C 3 HOH 21 440 440 HOH HOH L . C 3 HOH 22 441 441 HOH HOH L . C 3 HOH 23 444 444 HOH HOH L . C 3 HOH 24 445 445 HOH HOH L . C 3 HOH 25 446 446 HOH HOH L . C 3 HOH 26 447 447 HOH HOH L . C 3 HOH 27 448 448 HOH HOH L . C 3 HOH 28 449 449 HOH HOH L . C 3 HOH 29 455 455 HOH HOH L . C 3 HOH 30 456 456 HOH HOH L . C 3 HOH 31 457 457 HOH HOH L . C 3 HOH 32 470 470 HOH HOH L . C 3 HOH 33 471 471 HOH HOH L . C 3 HOH 34 472 472 HOH HOH L . C 3 HOH 35 475 475 HOH HOH L . C 3 HOH 36 477 477 HOH HOH L . C 3 HOH 37 478 478 HOH HOH L . C 3 HOH 38 480 480 HOH HOH L . C 3 HOH 39 486 486 HOH HOH L . C 3 HOH 40 488 488 HOH HOH L . C 3 HOH 41 490 490 HOH HOH L . C 3 HOH 42 491 491 HOH HOH L . C 3 HOH 43 494 494 HOH HOH L . C 3 HOH 44 495 495 HOH HOH L . C 3 HOH 45 496 496 HOH HOH L . C 3 HOH 46 498 498 HOH HOH L . C 3 HOH 47 505 505 HOH HOH L . C 3 HOH 48 506 506 HOH HOH L . C 3 HOH 49 507 507 HOH HOH L . C 3 HOH 50 508 508 HOH HOH L . C 3 HOH 51 509 509 HOH HOH L . C 3 HOH 52 510 510 HOH HOH L . C 3 HOH 53 513 513 HOH HOH L . C 3 HOH 54 514 514 HOH HOH L . C 3 HOH 55 517 517 HOH HOH L . C 3 HOH 56 518 518 HOH HOH L . C 3 HOH 57 519 519 HOH HOH L . C 3 HOH 58 520 520 HOH HOH L . C 3 HOH 59 521 521 HOH HOH L . C 3 HOH 60 523 523 HOH HOH L . C 3 HOH 61 524 524 HOH HOH L . C 3 HOH 62 525 525 HOH HOH L . C 3 HOH 63 526 526 HOH HOH L . C 3 HOH 64 527 527 HOH HOH L . C 3 HOH 65 534 534 HOH HOH L . C 3 HOH 66 536 536 HOH HOH L . C 3 HOH 67 537 537 HOH HOH L . C 3 HOH 68 539 539 HOH HOH L . C 3 HOH 69 548 548 HOH HOH L . C 3 HOH 70 549 549 HOH HOH L . C 3 HOH 71 550 550 HOH HOH L . C 3 HOH 72 553 553 HOH HOH L . C 3 HOH 73 554 554 HOH HOH L . C 3 HOH 74 556 556 HOH HOH L . C 3 HOH 75 558 558 HOH HOH L . C 3 HOH 76 564 564 HOH HOH L . C 3 HOH 77 566 566 HOH HOH L . C 3 HOH 78 567 567 HOH HOH L . C 3 HOH 79 569 569 HOH HOH L . C 3 HOH 80 572 572 HOH HOH L . C 3 HOH 81 573 573 HOH HOH L . C 3 HOH 82 575 575 HOH HOH L . C 3 HOH 83 576 576 HOH HOH L . D 3 HOH 1 403 403 HOH HOH H . D 3 HOH 2 404 404 HOH HOH H . D 3 HOH 3 406 406 HOH HOH H . D 3 HOH 4 408 408 HOH HOH H . D 3 HOH 5 411 411 HOH HOH H . D 3 HOH 6 412 412 HOH HOH H . D 3 HOH 7 417 417 HOH HOH H . D 3 HOH 8 418 418 HOH HOH H . D 3 HOH 9 419 419 HOH HOH H . D 3 HOH 10 420 420 HOH HOH H . D 3 HOH 11 423 423 HOH HOH H . D 3 HOH 12 427 427 HOH HOH H . D 3 HOH 13 428 428 HOH HOH H . D 3 HOH 14 429 429 HOH HOH H . D 3 HOH 15 430 430 HOH HOH H . D 3 HOH 16 431 431 HOH HOH H . D 3 HOH 17 432 432 HOH HOH H . D 3 HOH 18 434 434 HOH HOH H . D 3 HOH 19 436 436 HOH HOH H . D 3 HOH 20 442 442 HOH HOH H . D 3 HOH 21 443 443 HOH HOH H . D 3 HOH 22 450 450 HOH HOH H . D 3 HOH 23 451 451 HOH HOH H . D 3 HOH 24 452 452 HOH HOH H . D 3 HOH 25 453 453 HOH HOH H . D 3 HOH 26 454 454 HOH HOH H . D 3 HOH 27 458 458 HOH HOH H . D 3 HOH 28 459 459 HOH HOH H . D 3 HOH 29 460 460 HOH HOH H . D 3 HOH 30 461 461 HOH HOH H . D 3 HOH 31 462 462 HOH HOH H . D 3 HOH 32 463 463 HOH HOH H . D 3 HOH 33 464 464 HOH HOH H . D 3 HOH 34 465 465 HOH HOH H . D 3 HOH 35 466 466 HOH HOH H . D 3 HOH 36 467 467 HOH HOH H . D 3 HOH 37 468 468 HOH HOH H . D 3 HOH 38 469 469 HOH HOH H . D 3 HOH 39 473 473 HOH HOH H . D 3 HOH 40 474 474 HOH HOH H . D 3 HOH 41 476 476 HOH HOH H . D 3 HOH 42 479 479 HOH HOH H . D 3 HOH 43 481 481 HOH HOH H . D 3 HOH 44 482 482 HOH HOH H . D 3 HOH 45 483 483 HOH HOH H . D 3 HOH 46 484 484 HOH HOH H . D 3 HOH 47 485 485 HOH HOH H . D 3 HOH 48 487 487 HOH HOH H . D 3 HOH 49 489 489 HOH HOH H . D 3 HOH 50 492 492 HOH HOH H . D 3 HOH 51 493 493 HOH HOH H . D 3 HOH 52 497 497 HOH HOH H . D 3 HOH 53 499 499 HOH HOH H . D 3 HOH 54 500 500 HOH HOH H . D 3 HOH 55 501 501 HOH HOH H . D 3 HOH 56 502 502 HOH HOH H . D 3 HOH 57 503 503 HOH HOH H . D 3 HOH 58 504 504 HOH HOH H . D 3 HOH 59 511 511 HOH HOH H . D 3 HOH 60 512 512 HOH HOH H . D 3 HOH 61 515 515 HOH HOH H . D 3 HOH 62 516 516 HOH HOH H . D 3 HOH 63 522 522 HOH HOH H . D 3 HOH 64 528 528 HOH HOH H . D 3 HOH 65 529 529 HOH HOH H . D 3 HOH 66 530 530 HOH HOH H . D 3 HOH 67 531 531 HOH HOH H . D 3 HOH 68 532 532 HOH HOH H . D 3 HOH 69 533 533 HOH HOH H . D 3 HOH 70 535 535 HOH HOH H . D 3 HOH 71 538 538 HOH HOH H . D 3 HOH 72 540 540 HOH HOH H . D 3 HOH 73 541 541 HOH HOH H . D 3 HOH 74 542 542 HOH HOH H . D 3 HOH 75 543 543 HOH HOH H . D 3 HOH 76 544 544 HOH HOH H . D 3 HOH 77 545 545 HOH HOH H . D 3 HOH 78 546 546 HOH HOH H . D 3 HOH 79 547 547 HOH HOH H . D 3 HOH 80 551 551 HOH HOH H . D 3 HOH 81 552 552 HOH HOH H . D 3 HOH 82 555 555 HOH HOH H . D 3 HOH 83 557 557 HOH HOH H . D 3 HOH 84 559 559 HOH HOH H . D 3 HOH 85 560 560 HOH HOH H . D 3 HOH 86 561 561 HOH HOH H . D 3 HOH 87 562 562 HOH HOH H . D 3 HOH 88 563 563 HOH HOH H . D 3 HOH 89 565 565 HOH HOH H . D 3 HOH 90 568 568 HOH HOH H . D 3 HOH 91 570 570 HOH HOH H . D 3 HOH 92 571 571 HOH HOH H . D 3 HOH 93 574 574 HOH HOH H . D 3 HOH 94 577 577 HOH HOH H . D 3 HOH 95 578 578 HOH HOH H . D 3 HOH 96 579 579 HOH HOH H . D 3 HOH 97 580 580 HOH HOH H . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XENGEN 'data collection' . ? 1 XENGEN 'data reduction' . ? 2 X-PLOR 'model building' 3.1 ? 3 X-PLOR refinement 3.1 ? 4 XENGEN 'data scaling' . ? 5 X-PLOR phasing 3.1 ? 6 # _cell.entry_id 1DSF _cell.length_a 80.100 _cell.length_b 80.100 _cell.length_c 138.200 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DSF _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # _exptl.entry_id 1DSF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.6 _exptl_crystal.density_percent_sol 54. _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1.6M HEPES PH-7.0' # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS _diffrn_detector.pdbx_collection_date 1995-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DSF _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 57.8 _reflns.d_resolution_high 2.12 _reflns.number_obs 14289 _reflns.number_all ? _reflns.percent_possible_obs 92. _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.108 _reflns.pdbx_netI_over_sigmaI 6.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.0 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.12 _reflns_shell.d_res_low 2.20 _reflns_shell.percent_possible_all 58. _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.2644 _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.pdbx_redundancy 3.4 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1DSF _refine.ls_number_reflns_obs 11443 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.182 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.182 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1IGG' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1791 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 180 _refine_hist.number_atoms_total 1971 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.74 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPH19.PEP 'X-RAY DIFFRACTION' 2 PARAM.H2O TOPHCSDX.PRO 'X-RAY DIFFRACTION' 3 ? TOPOL.H2O 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1DSF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DSF _struct.title ;THE CRYSTAL STRUCTURE OF THE DISULFIDE-STABILIZED FV FRAGMENT OF ANTICANCER ANTIBODY B1: CONFORMATIONAL INFLUENCE OF AN ENGINEERED DISULFIDE BOND ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DSF _struct_keywords.pdbx_keywords IMMUNOGLOBULIN _struct_keywords.text 'MONOCLONAL ANTIBODY, ANTITUMOR, IMMUNOGLOBULIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PIR B41940 1 B41940 1 ;DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI SRVEAEDLGVYFCSQSTHVPLTFGAGTKLELKR ; ? 2 PDB 1DSF 2 1DSF ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1DSF L 1 ? 112 ? B41940 1 ? 112 ? 1 107 2 2 1DSF H 1 ? 119 ? 1DSF 3 ? 113 ? 3 113 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1DSF ASN L 28 A PIR B41940 SER 28 conflict 27 1 1 1DSF ASP L 33 ? PIR B41940 ASN 33 conflict 28 2 1 1DSF LYS L 35 ? PIR B41940 ASN 35 conflict 30 3 1 1DSF PHE L 41 ? PIR B41940 TYR 41 conflict 36 4 1 1DSF THR L 50 ? PIR B41940 LYS 50 conflict 45 5 1 1DSF ILE L 77 ? PIR B41940 THR 77 conflict 72 6 1 1DSF CYS L 105 ? PIR B41940 ALA 105 conflict 100 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1790 ? 1 MORE -17 ? 1 'SSA (A^2)' 10220 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 85 ? ASP A 87 ? ALA L 80 ASP L 82 5 ? 3 HELX_P HELX_P2 2 ASP B 51 A GLY B 53 ? ASP H 52 GLY H 54 5 ? 3 HELX_P HELX_P3 3 SER B 86 ? ASP B 88 ? SER H 84 ASP H 86 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 93 SG ? ? L CYS 23 L CYS 88 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? A CYS 105 SG ? ? ? 1_555 B CYS 42 SG ? ? L CYS 100 H CYS 44 1_555 ? ? ? ? ? ? ? 2.008 ? ? disulf3 disulf ? ? B CYS 20 SG ? ? ? 1_555 B CYS 94 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 2.026 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 THR 7 A . ? THR 7 L PRO 8 A ? PRO 8 L 1 -0.50 2 VAL 99 A . ? VAL 94 L PRO 100 A ? PRO 95 L 1 0.11 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 5 ? C ? 4 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 4 ? THR A 7 ? MET L 4 THR L 7 A 2 ALA A 19 ? SER A 25 ? ALA L 19 SER L 25 A 3 ASP A 75 ? ILE A 80 ? ASP L 70 ILE L 75 A 4 PHE A 67 ? SER A 72 ? PHE L 62 SER L 67 B 1 SER A 10 ? VAL A 13 ? SER L 10 VAL L 13 B 2 THR A 107 ? LEU A 111 ? THR L 102 LEU L 106 B 3 GLY A 89 ? GLN A 95 ? GLY L 84 GLN L 90 B 4 LEU A 38 ? GLN A 43 ? LEU L 33 GLN L 38 B 5 THR A 50 ? ILE A 53 ? THR L 45 ILE L 48 C 1 LEU B 2 ? SER B 5 ? LEU H 4 SER H 7 C 2 LEU B 16 ? ALA B 22 ? LEU H 18 ALA H 24 C 3 ASN B 76 ? MET B 81 ? ASN H 77 MET H 82 C 4 PHE B 66 ? SER B 69 ? PHE H 67 SER H 70 D 1 THR B 113 ? VAL B 115 ? THR H 107 VAL H 109 D 2 GLY B 90 ? PRO B 98 ? GLY H 88 PRO H 96 D 3 ASN B 30 ? GLN B 37 ? ASN H 32 GLN H 39 D 4 LEU B 43 ? ILE B 49 ? LEU H 45 ILE H 51 D 5 ILE B 56 ? TYR B 58 ? ILE H 57 TYR H 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 5 ? O THR L 5 N ARG A 24 ? N ARG L 24 A 2 3 O ALA A 19 ? O ALA L 19 N ILE A 80 ? N ILE L 75 A 3 4 O ASP A 75 ? O ASP L 70 N SER A 72 ? N SER L 67 B 1 2 O LEU A 11 ? O LEU L 11 N LYS A 108 ? N LYS L 103 B 2 3 O THR A 107 ? O THR L 102 N TYR A 91 ? N TYR L 86 B 3 4 O VAL A 90 ? O VAL L 85 N GLN A 43 ? N GLN L 38 B 4 5 O TRP A 40 ? O TRP L 35 N ILE A 53 ? N ILE L 48 C 1 2 O VAL B 3 ? O VAL H 5 N ALA B 21 ? N ALA H 23 C 2 3 O LEU B 16 ? O LEU H 18 N MET B 81 ? N MET H 82 C 3 4 O TYR B 78 ? O TYR H 79 N SER B 69 ? N SER H 70 D 1 2 O THR B 113 ? O THR H 107 N TYR B 92 ? N TYR H 90 D 2 3 O MET B 91 ? O MET H 89 N GLN B 37 ? N GLN H 39 D 3 4 O MET B 32 ? O MET H 34 N ILE B 49 ? N ILE H 51 D 4 5 O THR B 48 ? O THR H 50 N ASP B 57 ? N ASP H 58 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N H ALA 74 ? ? CA H ALA 74 ? ? C H ALA 74 ? ? 93.01 111.00 -17.99 2.70 N 2 1 N H TYR 99 ? ? CA H TYR 99 ? ? C H TYR 99 ? ? 129.31 111.00 18.31 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL L 51 ? ? 78.07 -53.53 2 1 SER H 25 ? ? -170.78 142.58 3 1 PHE H 29 ? ? 55.84 -54.97 4 1 LYS H 43 ? ? 87.36 -3.53 5 1 LYS H 75 ? ? 175.08 90.35 6 1 ASP H 100 ? ? 58.45 83.21 7 1 TYR H 100 A ? -121.21 -93.61 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_initial_refinement_model.accession_code 1IGF _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 1DSF _atom_sites.fract_transf_matrix[1][1] 0.012484 _atom_sites.fract_transf_matrix[1][2] 0.007208 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014416 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007236 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_