data_1DUQ # _entry.id 1DUQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1DUQ pdb_00001duq 10.2210/pdb1duq/pdb NDB AR0028 ? ? RCSB RCSB010386 ? ? WWPDB D_1000010386 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-05-16 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.pdbx_dist_value' 22 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 36 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DUQ _pdbx_database_status.recvd_initial_deposition_date 2000-01-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hung, L.-W.' 1 'Holbrook, E.L.' 2 'Holbrook, S.R.' 3 # _citation.id primary _citation.title 'The crystal structure of the Rev binding element of HIV-1 reveals novel base pairing and conformational variability.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 97 _citation.page_first 5107 _citation.page_last 5112 _citation.year 2000 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10792052 _citation.pdbx_database_id_DOI 10.1073/pnas.090588197 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hung, L.W.' 1 ? primary 'Holbrook, E.L.' 2 ? primary 'Holbrook, S.R.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'THE REV BINDING ELEMENT' 3922.400 4 ? ? 'SHORT CHAIN' ? 2 polymer syn 'THE REV BINDING ELEMENT' 4461.723 4 ? ? 'LONG CHAIN' ? 3 non-polymer syn 'SODIUM ION' 22.990 10 ? ? ? ? 4 water nat water 18.015 83 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GCUGGGCGCAGG GCUGGGCGCAGG A,C,E,G ? 2 polyribonucleotide no no CCUGACGGUACAGC CCUGACGGUACAGC B,D,F,H ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SODIUM ION' NA 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 U n 1 4 G n 1 5 G n 1 6 G n 1 7 C n 1 8 G n 1 9 C n 1 10 A n 1 11 G n 1 12 G n 2 1 C n 2 2 C n 2 3 U n 2 4 G n 2 5 A n 2 6 C n 2 7 G n 2 8 G n 2 9 U n 2 10 A n 2 11 C n 2 12 A n 2 13 G n 2 14 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'SEQUENCE FROM HIV-1. SYNTHESIZED BY OLIGOS, ETC.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 101 101 G G A . n A 1 2 C 2 102 102 C C A . n A 1 3 U 3 103 103 U U A . n A 1 4 G 4 104 104 G G A . n A 1 5 G 5 105 105 G G A . n A 1 6 G 6 106 106 G G A . n A 1 7 C 7 107 107 C C A . n A 1 8 G 8 108 108 G G A . n A 1 9 C 9 109 109 C C A . n A 1 10 A 10 110 110 A A A . n A 1 11 G 11 111 111 G G A . n A 1 12 G 12 112 112 G G A . n B 2 1 C 1 117 117 C C B . n B 2 2 C 2 118 118 C C B . n B 2 3 U 3 119 119 U U B . n B 2 4 G 4 120 120 G G B . n B 2 5 A 5 121 121 A A B . n B 2 6 C 6 122 122 C C B . n B 2 7 G 7 123 123 G G B . n B 2 8 G 8 124 124 G G B . n B 2 9 U 9 125 125 U U B . n B 2 10 A 10 126 126 A A B . n B 2 11 C 11 127 127 C C B . n B 2 12 A 12 128 128 A A B . n B 2 13 G 13 129 129 G G B . n B 2 14 C 14 130 130 C C B . n C 1 1 G 1 201 201 G G C . n C 1 2 C 2 202 202 C C C . n C 1 3 U 3 203 203 U U C . n C 1 4 G 4 204 204 G G C . n C 1 5 G 5 205 205 G G C . n C 1 6 G 6 206 206 G G C . n C 1 7 C 7 207 207 C C C . n C 1 8 G 8 208 208 G G C . n C 1 9 C 9 209 209 C C C . n C 1 10 A 10 210 210 A A C . n C 1 11 G 11 211 211 G G C . n C 1 12 G 12 212 212 G G C . n D 2 1 C 1 217 217 C C D . n D 2 2 C 2 218 218 C C D . n D 2 3 U 3 219 219 U U D . n D 2 4 G 4 220 220 G G D . n D 2 5 A 5 221 221 A A D . n D 2 6 C 6 222 222 C C D . n D 2 7 G 7 223 223 G G D . n D 2 8 G 8 224 224 G G D . n D 2 9 U 9 225 225 U U D . n D 2 10 A 10 226 226 A A D . n D 2 11 C 11 227 227 C C D . n D 2 12 A 12 228 228 A A D . n D 2 13 G 13 229 229 G G D . n D 2 14 C 14 230 230 C C D . n E 1 1 G 1 301 301 G G E . n E 1 2 C 2 302 302 C C E . n E 1 3 U 3 303 303 U U E . n E 1 4 G 4 304 304 G G E . n E 1 5 G 5 305 305 G G E . n E 1 6 G 6 306 306 G G E . n E 1 7 C 7 307 307 C C E . n E 1 8 G 8 308 308 G G E . n E 1 9 C 9 309 309 C C E . n E 1 10 A 10 310 310 A A E . n E 1 11 G 11 311 311 G G E . n E 1 12 G 12 312 312 G G E . n F 2 1 C 1 317 317 C C F . n F 2 2 C 2 318 318 C C F . n F 2 3 U 3 319 319 U U F . n F 2 4 G 4 320 320 G G F . n F 2 5 A 5 321 321 A A F . n F 2 6 C 6 322 322 C C F . n F 2 7 G 7 323 323 G G F . n F 2 8 G 8 324 324 G G F . n F 2 9 U 9 325 325 U U F . n F 2 10 A 10 326 326 A A F . n F 2 11 C 11 327 327 C C F . n F 2 12 A 12 328 328 A A F . n F 2 13 G 13 329 329 G G F . n F 2 14 C 14 330 330 C C F . n G 1 1 G 1 401 401 G G G . n G 1 2 C 2 402 402 C C G . n G 1 3 U 3 403 403 U U G . n G 1 4 G 4 404 404 G G G . n G 1 5 G 5 405 405 G G G . n G 1 6 G 6 406 406 G G G . n G 1 7 C 7 407 407 C C G . n G 1 8 G 8 408 408 G G G . n G 1 9 C 9 409 409 C C G . n G 1 10 A 10 410 410 A A G . n G 1 11 G 11 411 411 G G G . n G 1 12 G 12 412 412 G G G . n H 2 1 C 1 417 417 C C H . n H 2 2 C 2 418 418 C C H . n H 2 3 U 3 419 419 U U H . n H 2 4 G 4 420 420 G G H . n H 2 5 A 5 421 421 A A H . n H 2 6 C 6 422 422 C C H . n H 2 7 G 7 423 423 G G H . n H 2 8 G 8 424 424 G G H . n H 2 9 U 9 425 425 U U H . n H 2 10 A 10 426 426 A A H . n H 2 11 C 11 427 427 C C H . n H 2 12 A 12 428 428 A A H . n H 2 13 G 13 429 429 G G H . n H 2 14 C 14 430 430 C C H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 NA 1 911 911 NA NA B . J 3 NA 1 904 904 NA NA C . K 3 NA 1 906 906 NA NA C . L 3 NA 1 913 913 NA NA C . M 3 NA 1 901 901 NA NA D . N 3 NA 1 912 912 NA NA E . O 3 NA 1 905 905 NA NA G . P 3 NA 1 914 914 NA NA G . Q 3 NA 1 902 902 NA NA H . R 3 NA 1 903 903 NA NA H . S 4 HOH 1 506 506 HOH HOH A . S 4 HOH 2 508 508 HOH HOH A . S 4 HOH 3 509 509 HOH HOH A . S 4 HOH 4 516 516 HOH HOH A . S 4 HOH 5 538 538 HOH HOH A . S 4 HOH 6 541 541 HOH HOH A . S 4 HOH 7 548 548 HOH HOH A . S 4 HOH 8 603 603 HOH HOH A . S 4 HOH 9 605 605 HOH HOH A . S 4 HOH 10 611 611 HOH HOH A . S 4 HOH 11 619 619 HOH HOH A . T 4 HOH 1 502 502 HOH HOH B . T 4 HOH 2 503 503 HOH HOH B . T 4 HOH 3 505 505 HOH HOH B . T 4 HOH 4 510 510 HOH HOH B . T 4 HOH 5 520 520 HOH HOH B . T 4 HOH 6 522 522 HOH HOH B . T 4 HOH 7 525 525 HOH HOH B . T 4 HOH 8 526 526 HOH HOH B . T 4 HOH 9 530 530 HOH HOH B . T 4 HOH 10 531 531 HOH HOH B . T 4 HOH 11 533 533 HOH HOH B . T 4 HOH 12 535 535 HOH HOH B . T 4 HOH 13 543 543 HOH HOH B . T 4 HOH 14 546 546 HOH HOH B . T 4 HOH 15 606 606 HOH HOH B . T 4 HOH 16 617 617 HOH HOH B . T 4 HOH 17 624 624 HOH HOH B . T 4 HOH 18 625 625 HOH HOH B . U 4 HOH 1 528 528 HOH HOH C . U 4 HOH 2 532 532 HOH HOH C . U 4 HOH 3 540 540 HOH HOH C . U 4 HOH 4 631 631 HOH HOH C . U 4 HOH 5 633 633 HOH HOH C . U 4 HOH 6 637 637 HOH HOH C . V 4 HOH 1 514 514 HOH HOH D . V 4 HOH 2 517 517 HOH HOH D . V 4 HOH 3 523 523 HOH HOH D . V 4 HOH 4 542 542 HOH HOH D . V 4 HOH 5 547 547 HOH HOH D . V 4 HOH 6 601 601 HOH HOH D . V 4 HOH 7 612 612 HOH HOH D . V 4 HOH 8 616 616 HOH HOH D . V 4 HOH 9 620 620 HOH HOH D . V 4 HOH 10 623 623 HOH HOH D . V 4 HOH 11 628 628 HOH HOH D . W 4 HOH 1 507 507 HOH HOH E . W 4 HOH 2 518 518 HOH HOH E . W 4 HOH 3 521 521 HOH HOH E . W 4 HOH 4 545 545 HOH HOH E . W 4 HOH 5 607 607 HOH HOH E . W 4 HOH 6 610 610 HOH HOH E . W 4 HOH 7 613 613 HOH HOH E . X 4 HOH 1 504 504 HOH HOH F . X 4 HOH 2 511 511 HOH HOH F . X 4 HOH 3 524 524 HOH HOH F . X 4 HOH 4 527 527 HOH HOH F . X 4 HOH 5 529 529 HOH HOH F . X 4 HOH 6 536 536 HOH HOH F . X 4 HOH 7 537 537 HOH HOH F . X 4 HOH 8 539 539 HOH HOH F . X 4 HOH 9 544 544 HOH HOH F . X 4 HOH 10 614 614 HOH HOH F . X 4 HOH 11 621 621 HOH HOH F . X 4 HOH 12 626 626 HOH HOH F . X 4 HOH 13 630 630 HOH HOH F . Y 4 HOH 1 512 512 HOH HOH G . Y 4 HOH 2 519 519 HOH HOH G . Y 4 HOH 3 608 608 HOH HOH G . Y 4 HOH 4 618 618 HOH HOH G . Y 4 HOH 5 622 622 HOH HOH G . Y 4 HOH 6 627 627 HOH HOH G . Y 4 HOH 7 632 632 HOH HOH G . Y 4 HOH 8 635 635 HOH HOH G . Y 4 HOH 9 636 636 HOH HOH G . Z 4 HOH 1 513 513 HOH HOH H . Z 4 HOH 2 515 515 HOH HOH H . Z 4 HOH 3 534 534 HOH HOH H . Z 4 HOH 4 602 602 HOH HOH H . Z 4 HOH 5 604 604 HOH HOH H . Z 4 HOH 6 609 609 HOH HOH H . Z 4 HOH 7 615 615 HOH HOH H . Z 4 HOH 8 629 629 HOH HOH H . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SOLVE phasing . ? 1 CNS refinement 0.9 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 1DUQ _cell.length_a 23.993 _cell.length_b 53.930 _cell.length_c 64.729 _cell.angle_alpha 114.52 _cell.angle_beta 89.88 _cell.angle_gamma 102.85 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DUQ _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting triclinic _symmetry.Int_Tables_number 1 # _exptl.entry_id 1DUQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.19 _exptl_crystal.density_Matthews 2.20 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '0.1M SODIUM CACODYLATE, PH 6.5, 0.2 M NACL, 35% MPD, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'SODIUM CACODYLATE' ? ? ? 1 2 1 NACL ? ? ? 1 3 1 MPD ? ? ? 1 4 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 1999-08-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.100 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 _diffrn_source.pdbx_wavelength 1.100 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1DUQ _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 20 _reflns.d_resolution_high 2.1 _reflns.number_obs 15998 _reflns.number_all 16703 _reflns.percent_possible_obs 94.7 _reflns.pdbx_Rmerge_I_obs 0.3800000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8 _reflns.B_iso_Wilson_estimate 25.6 _reflns.pdbx_redundancy 1.8 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.17 _reflns_shell.percent_possible_all 83.2 _reflns_shell.Rmerge_I_obs 0.2480000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 1.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1DUQ _refine.ls_number_reflns_obs 14136 _refine.ls_number_reflns_all 15998 _refine.pdbx_ls_sigma_I 1.0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 659115.35 _refine.pdbx_data_cutoff_low_absF 0.00 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.77 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 84.6 _refine.ls_R_factor_obs 0.2180000 _refine.ls_R_factor_all 0.2210000 _refine.ls_R_factor_R_work 0.2180000 _refine.ls_R_factor_R_free 0.2690000 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 1431 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 41.1 _refine.aniso_B[1][1] 8.52 _refine.aniso_B[2][2] -3.54 _refine.aniso_B[3][3] -4.98 _refine.aniso_B[1][2] 0.39 _refine.aniso_B[1][3] -0.73 _refine.aniso_B[2][3] 2.74 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.399 _refine.solvent_model_param_bsol 60.11 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1DUQ _refine_analyze.Luzzati_coordinate_error_obs 0.32 _refine_analyze.Luzzati_sigma_a_obs 0.33 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.41 _refine_analyze.Luzzati_sigma_a_free 0.46 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2220 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 83 _refine_hist.number_atoms_total 2313 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 19.77 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.5 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 16.9 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.57 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.23 _refine_ls_shell.number_reflns_R_work 1581 _refine_ls_shell.R_factor_R_work 0.3010000 _refine_ls_shell.percent_reflns_obs 62.9 _refine_ls_shell.R_factor_R_free 0.3850000 _refine_ls_shell.R_factor_R_free_error 0.029 _refine_ls_shell.percent_reflns_R_free 10.1 _refine_ls_shell.number_reflns_R_free 177 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PA PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PA DNA-RNA_REP.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARA WATER_REP.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1DUQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1DUQ _struct.title 'CRYSTAL STRUCTURE OF THE REV BINDING ELEMENT OF HIV-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DUQ _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'RRE, HIV-1, REV BINDING DOMAIN, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 1 ? F N N 2 ? G N N 1 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 3 ? R N N 3 ? S N N 4 ? T N N 4 ? U N N 4 ? V N N 4 ? W N N 4 ? X N N 4 ? Y N N 4 ? Z N N 4 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1DUQ 1DUQ ? ? ? 2 2 PDB 1DUQ 1DUQ ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1DUQ A 1 ? 12 ? 1DUQ 101 ? 112 ? 101 112 2 2 1DUQ B 1 ? 14 ? 1DUQ 117 ? 130 ? 117 130 3 1 1DUQ C 1 ? 12 ? 1DUQ 201 ? 212 ? 201 212 4 2 1DUQ D 1 ? 14 ? 1DUQ 217 ? 230 ? 217 230 5 1 1DUQ E 1 ? 12 ? 1DUQ 301 ? 312 ? 301 312 6 2 1DUQ F 1 ? 14 ? 1DUQ 317 ? 330 ? 317 330 7 1 1DUQ G 1 ? 12 ? 1DUQ 401 ? 412 ? 401 412 8 2 1DUQ H 1 ? 14 ? 1DUQ 417 ? 430 ? 417 430 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 3 author_defined_assembly ? dimeric 2 4 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,I,S,T 2 1 C,D,J,K,L,M,U,V 3 1 E,F,N,W,X 4 1 G,H,O,P,Q,R,Y,Z # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? 3 ? ? 4 ? ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 6 O6 ? ? ? 1_555 I NA . NA ? ? A G 106 B NA 911 1_555 ? ? ? ? ? ? ? 2.460 ? ? metalc2 metalc ? ? S HOH . O ? ? ? 1_555 I NA . NA ? ? A HOH 603 B NA 911 1_555 ? ? ? ? ? ? ? 2.521 ? ? metalc3 metalc ? ? B G 7 O6 ? ? ? 1_555 I NA . NA ? ? B G 123 B NA 911 1_555 ? ? ? ? ? ? ? 2.928 ? ? metalc4 metalc ? ? B G 8 O6 ? ? ? 1_555 I NA . NA ? ? B G 124 B NA 911 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc5 metalc ? ? C G 1 "O5'" ? ? ? 1_555 K NA . NA ? ? C G 201 C NA 906 1_555 ? ? ? ? ? ? ? 1.903 ? ? metalc6 metalc ? ? C G 1 "O3'" ? ? ? 1_555 K NA . NA ? ? C G 201 C NA 906 1_555 ? ? ? ? ? ? ? 2.953 ? ? metalc7 metalc ? ? C G 1 N1 ? ? ? 1_555 L NA . NA ? ? C G 201 C NA 913 1_555 ? ? ? ? ? ? ? 2.231 ? ? metalc8 metalc ? ? C C 2 OP2 ? ? ? 1_555 K NA . NA ? ? C C 202 C NA 906 1_555 ? ? ? ? ? ? ? 2.756 ? ? metalc9 metalc ? ? C G 6 O6 ? ? ? 1_555 J NA . NA ? ? C G 206 C NA 904 1_555 ? ? ? ? ? ? ? 2.276 ? ? metalc10 metalc ? ? U HOH . O ? ? ? 1_555 J NA . NA ? ? C HOH 631 C NA 904 1_555 ? ? ? ? ? ? ? 2.791 ? ? metalc11 metalc ? ? J NA . NA ? ? ? 1_555 D G 7 O6 ? ? C NA 904 D G 223 1_555 ? ? ? ? ? ? ? 2.998 ? ? metalc12 metalc ? ? J NA . NA ? ? ? 1_555 D G 8 O6 ? ? C NA 904 D G 224 1_555 ? ? ? ? ? ? ? 2.129 ? ? metalc13 metalc ? ? J NA . NA ? ? ? 1_555 V HOH . O ? ? C NA 904 D HOH 601 1_555 ? ? ? ? ? ? ? 2.382 ? ? metalc14 metalc ? ? L NA . NA ? ? ? 1_555 D C 14 O2 ? ? C NA 913 D C 230 1_555 ? ? ? ? ? ? ? 2.750 ? ? metalc15 metalc ? ? D G 4 "O2'" ? ? ? 1_555 M NA . NA ? ? D G 220 D NA 901 1_555 ? ? ? ? ? ? ? 2.796 ? ? metalc16 metalc ? ? D A 5 OP2 ? ? ? 1_555 M NA . NA ? ? D A 221 D NA 901 1_555 ? ? ? ? ? ? ? 2.257 ? ? metalc17 metalc ? ? D A 5 "O3'" ? ? ? 1_555 M NA . NA ? ? D A 221 D NA 901 1_555 ? ? ? ? ? ? ? 2.907 ? ? metalc18 metalc ? ? D C 6 "O5'" ? ? ? 1_555 M NA . NA ? ? D C 222 D NA 901 1_555 ? ? ? ? ? ? ? 2.060 ? ? metalc19 metalc ? ? D C 6 OP1 ? ? ? 1_555 M NA . NA ? ? D C 222 D NA 901 1_555 ? ? ? ? ? ? ? 2.944 ? ? metalc20 metalc ? ? E G 6 O6 ? ? ? 1_555 N NA . NA ? ? E G 306 E NA 912 1_555 ? ? ? ? ? ? ? 2.206 ? ? metalc21 metalc ? ? N NA . NA ? ? ? 1_555 F G 8 O6 ? ? E NA 912 F G 324 1_555 ? ? ? ? ? ? ? 2.173 ? ? metalc22 metalc ? ? G G 1 "O5'" ? ? ? 1_555 O NA . NA ? ? G G 401 G NA 905 1_555 ? ? ? ? ? ? ? 2.109 ? ? metalc23 metalc ? ? G G 1 "O3'" ? ? ? 1_555 O NA . NA ? ? G G 401 G NA 905 1_555 ? ? ? ? ? ? ? 2.826 ? ? metalc24 metalc ? ? G G 1 N1 ? ? ? 1_555 P NA . NA ? ? G G 401 G NA 914 1_555 ? ? ? ? ? ? ? 2.718 ? ? metalc25 metalc ? ? G C 2 OP2 ? ? ? 1_555 O NA . NA ? ? G C 402 G NA 905 1_555 ? ? ? ? ? ? ? 2.957 ? ? metalc26 metalc ? ? G G 6 O6 ? ? ? 1_555 Q NA . NA ? ? G G 406 H NA 902 1_555 ? ? ? ? ? ? ? 2.318 ? ? metalc27 metalc ? ? Y HOH . O ? ? ? 1_555 Q NA . NA ? ? G HOH 635 H NA 902 1_555 ? ? ? ? ? ? ? 2.831 ? ? metalc28 metalc ? ? P NA . NA ? ? ? 1_555 H C 14 O2 ? ? G NA 914 H C 430 1_555 ? ? ? ? ? ? ? 2.719 ? ? metalc29 metalc ? ? H G 4 "O2'" ? ? ? 1_555 R NA . NA ? ? H G 420 H NA 903 1_555 ? ? ? ? ? ? ? 2.857 ? ? metalc30 metalc ? ? H A 5 OP2 ? ? ? 1_555 R NA . NA ? ? H A 421 H NA 903 1_555 ? ? ? ? ? ? ? 1.859 ? ? metalc31 metalc ? ? H C 6 "O5'" ? ? ? 1_555 R NA . NA ? ? H C 422 H NA 903 1_555 ? ? ? ? ? ? ? 2.821 ? ? metalc32 metalc ? ? H G 7 O6 ? ? ? 1_555 Q NA . NA ? ? H G 423 H NA 902 1_555 ? ? ? ? ? ? ? 2.843 ? ? metalc33 metalc ? ? H G 8 O6 ? ? ? 1_555 Q NA . NA ? ? H G 424 H NA 902 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc34 metalc ? ? Z HOH . O ? ? ? 1_555 Q NA . NA ? ? H HOH 602 H NA 902 1_555 ? ? ? ? ? ? ? 2.187 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 14 N3 ? ? A G 101 B C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 14 O2 ? ? A G 101 B C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 14 N4 ? ? A G 101 B C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 2 N3 ? ? ? 1_555 B G 13 N1 ? ? A C 102 B G 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A C 2 N4 ? ? ? 1_555 B G 13 O6 ? ? A C 102 B G 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 2 O2 ? ? ? 1_555 B G 13 N2 ? ? A C 102 B G 129 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A U 3 N3 ? ? ? 1_555 B A 12 N1 ? ? A U 103 B A 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 3 O4 ? ? ? 1_555 B A 12 N6 ? ? A U 103 B A 128 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 B C 11 N3 ? ? A G 104 B C 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 B C 11 O2 ? ? A G 104 B C 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 B C 11 N4 ? ? A G 104 B C 127 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N1 ? ? ? 1_555 B A 10 N1 ? ? A G 105 B A 126 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 B A 10 N6 ? ? A G 105 B A 126 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog14 hydrog ? ? A G 6 N1 ? ? ? 1_555 B G 8 O6 ? ? A G 106 B G 124 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A G 6 N2 ? ? ? 1_555 B G 8 N7 ? ? A G 106 B G 124 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A C 7 N3 ? ? ? 1_555 B G 7 N1 ? ? A C 107 B G 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N4 ? ? ? 1_555 B G 7 O6 ? ? A C 107 B G 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 O2 ? ? ? 1_555 B G 7 N2 ? ? A C 107 B G 123 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 6 N3 ? ? A G 108 B C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 6 O2 ? ? A G 108 B C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 6 N4 ? ? A G 108 B C 122 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 9 N3 ? ? ? 1_555 B G 4 N1 ? ? A C 109 B G 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 9 N4 ? ? ? 1_555 B G 4 O6 ? ? A C 109 B G 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 9 O2 ? ? ? 1_555 B G 4 N2 ? ? A C 109 B G 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A A 10 N1 ? ? ? 1_555 B U 3 N3 ? ? A A 110 B U 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 10 N6 ? ? ? 1_555 B U 3 O4 ? ? A A 110 B U 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 11 N1 ? ? ? 1_555 B C 2 N3 ? ? A G 111 B C 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 11 N2 ? ? ? 1_555 B C 2 O2 ? ? A G 111 B C 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 11 O6 ? ? ? 1_555 B C 2 N4 ? ? A G 111 B C 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 12 N1 ? ? ? 1_555 B C 1 N3 ? ? A G 112 B C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 12 N2 ? ? ? 1_555 B C 1 O2 ? ? A G 112 B C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 12 O6 ? ? ? 1_555 B C 1 N4 ? ? A G 112 B C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C C 2 N3 ? ? ? 1_555 D G 13 N1 ? ? C C 202 D G 229 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C C 2 N4 ? ? ? 1_555 D G 13 O6 ? ? C C 202 D G 229 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C C 2 O2 ? ? ? 1_555 D G 13 N2 ? ? C C 202 D G 229 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C U 3 N3 ? ? ? 1_555 D A 12 N1 ? ? C U 203 D A 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C U 3 O4 ? ? ? 1_555 D A 12 N6 ? ? C U 203 D A 228 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C G 4 N1 ? ? ? 1_555 D C 11 N3 ? ? C G 204 D C 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C G 4 N2 ? ? ? 1_555 D C 11 O2 ? ? C G 204 D C 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C G 4 O6 ? ? ? 1_555 D C 11 N4 ? ? C G 204 D C 227 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C G 6 N1 ? ? ? 1_555 D G 8 O6 ? ? C G 206 D G 224 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog42 hydrog ? ? C G 6 N2 ? ? ? 1_555 D G 8 N7 ? ? C G 206 D G 224 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog43 hydrog ? ? C C 7 N3 ? ? ? 1_555 D G 7 N1 ? ? C C 207 D G 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C C 7 N4 ? ? ? 1_555 D G 7 O6 ? ? C C 207 D G 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C C 7 O2 ? ? ? 1_555 D G 7 N2 ? ? C C 207 D G 223 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C G 8 N1 ? ? ? 1_555 D C 6 N3 ? ? C G 208 D C 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C G 8 N2 ? ? ? 1_555 D C 6 O2 ? ? C G 208 D C 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C G 8 O6 ? ? ? 1_555 D C 6 N4 ? ? C G 208 D C 222 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C C 9 N3 ? ? ? 1_555 D G 4 N1 ? ? C C 209 D G 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? C C 9 N4 ? ? ? 1_555 D G 4 O6 ? ? C C 209 D G 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? C C 9 O2 ? ? ? 1_555 D G 4 N2 ? ? C C 209 D G 220 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C A 10 N1 ? ? ? 1_555 D U 3 N3 ? ? C A 210 D U 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C A 10 N6 ? ? ? 1_555 D U 3 O4 ? ? C A 210 D U 219 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C G 11 N1 ? ? ? 1_555 D C 2 N3 ? ? C G 211 D C 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C G 11 N2 ? ? ? 1_555 D C 2 O2 ? ? C G 211 D C 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C G 11 O6 ? ? ? 1_555 D C 2 N4 ? ? C G 211 D C 218 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C G 12 N1 ? ? ? 1_555 D C 1 N3 ? ? C G 212 D C 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C G 12 N2 ? ? ? 1_555 D C 1 O2 ? ? C G 212 D C 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? C G 12 O6 ? ? ? 1_555 D C 1 N4 ? ? C G 212 D C 217 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? D U 9 O4 ? ? ? 1_555 G G 8 N2 ? ? D U 225 G G 408 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog61 hydrog ? ? E G 1 N1 ? ? ? 1_555 F C 14 N3 ? ? E G 301 F C 330 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E G 1 N2 ? ? ? 1_555 F C 14 O2 ? ? E G 301 F C 330 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E G 1 O6 ? ? ? 1_555 F C 14 N4 ? ? E G 301 F C 330 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? E C 2 N3 ? ? ? 1_555 F G 13 N1 ? ? E C 302 F G 329 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? E C 2 N4 ? ? ? 1_555 F G 13 O6 ? ? E C 302 F G 329 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? E C 2 O2 ? ? ? 1_555 F G 13 N2 ? ? E C 302 F G 329 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? E U 3 N3 ? ? ? 1_555 F A 12 N1 ? ? E U 303 F A 328 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? E U 3 O4 ? ? ? 1_555 F A 12 N6 ? ? E U 303 F A 328 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? E G 4 N1 ? ? ? 1_555 F C 11 N3 ? ? E G 304 F C 327 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? E G 4 N2 ? ? ? 1_555 F C 11 O2 ? ? E G 304 F C 327 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? E G 4 O6 ? ? ? 1_555 F C 11 N4 ? ? E G 304 F C 327 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? E G 5 N1 ? ? ? 1_555 F A 10 N1 ? ? E G 305 F A 326 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog73 hydrog ? ? E G 5 O6 ? ? ? 1_555 F A 10 N6 ? ? E G 305 F A 326 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog74 hydrog ? ? E G 6 N1 ? ? ? 1_555 F G 8 O6 ? ? E G 306 F G 324 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog75 hydrog ? ? E G 6 N2 ? ? ? 1_555 F G 8 N7 ? ? E G 306 F G 324 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog76 hydrog ? ? E C 7 N3 ? ? ? 1_555 F G 7 N1 ? ? E C 307 F G 323 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? E C 7 N4 ? ? ? 1_555 F G 7 O6 ? ? E C 307 F G 323 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? E C 7 O2 ? ? ? 1_555 F G 7 N2 ? ? E C 307 F G 323 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? E G 8 N1 ? ? ? 1_555 F C 6 N3 ? ? E G 308 F C 322 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? E G 8 N2 ? ? ? 1_555 F C 6 O2 ? ? E G 308 F C 322 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? E G 8 O6 ? ? ? 1_555 F C 6 N4 ? ? E G 308 F C 322 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? E C 9 N3 ? ? ? 1_555 F G 4 N1 ? ? E C 309 F G 320 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? E C 9 N4 ? ? ? 1_555 F G 4 O6 ? ? E C 309 F G 320 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? E C 9 O2 ? ? ? 1_555 F G 4 N2 ? ? E C 309 F G 320 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? E A 10 N1 ? ? ? 1_555 F U 3 N3 ? ? E A 310 F U 319 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? E A 10 N6 ? ? ? 1_555 F U 3 O4 ? ? E A 310 F U 319 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? E G 11 N1 ? ? ? 1_555 F C 2 N3 ? ? E G 311 F C 318 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? E G 11 N2 ? ? ? 1_555 F C 2 O2 ? ? E G 311 F C 318 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? E G 11 O6 ? ? ? 1_555 F C 2 N4 ? ? E G 311 F C 318 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? E G 12 N1 ? ? ? 1_555 F C 1 N3 ? ? E G 312 F C 317 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? E G 12 N2 ? ? ? 1_555 F C 1 O2 ? ? E G 312 F C 317 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? E G 12 O6 ? ? ? 1_555 F C 1 N4 ? ? E G 312 F C 317 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? G C 2 N3 ? ? ? 1_555 H G 13 N2 ? ? G C 402 H G 429 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog94 hydrog ? ? G C 2 O2 ? ? ? 1_555 H G 13 N1 ? ? G C 402 H G 429 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog95 hydrog ? ? G U 3 N3 ? ? ? 1_555 H A 12 N1 ? ? G U 403 H A 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? G U 3 O4 ? ? ? 1_555 H A 12 N6 ? ? G U 403 H A 428 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? G G 4 N1 ? ? ? 1_555 H C 11 N3 ? ? G G 404 H C 427 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? G G 4 N2 ? ? ? 1_555 H C 11 O2 ? ? G G 404 H C 427 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? G G 4 O6 ? ? ? 1_555 H C 11 N4 ? ? G G 404 H C 427 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? G G 6 N1 ? ? ? 1_555 H G 8 O6 ? ? G G 406 H G 424 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog101 hydrog ? ? G G 6 N2 ? ? ? 1_555 H G 8 N7 ? ? G G 406 H G 424 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog102 hydrog ? ? G C 7 N3 ? ? ? 1_555 H G 7 N1 ? ? G C 407 H G 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? G C 7 N4 ? ? ? 1_555 H G 7 O6 ? ? G C 407 H G 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? G C 7 O2 ? ? ? 1_555 H G 7 N2 ? ? G C 407 H G 423 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? G G 8 N1 ? ? ? 1_555 H C 6 N3 ? ? G G 408 H C 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? G G 8 N2 ? ? ? 1_555 H C 6 O2 ? ? G G 408 H C 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? G G 8 O6 ? ? ? 1_555 H C 6 N4 ? ? G G 408 H C 422 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? G C 9 N3 ? ? ? 1_555 H G 4 N1 ? ? G C 409 H G 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? G C 9 N4 ? ? ? 1_555 H G 4 O6 ? ? G C 409 H G 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? G C 9 O2 ? ? ? 1_555 H G 4 N2 ? ? G C 409 H G 420 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? G A 10 N1 ? ? ? 1_555 H U 3 N3 ? ? G A 410 H U 419 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? G A 10 N6 ? ? ? 1_555 H U 3 O4 ? ? G A 410 H U 419 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? G G 11 N1 ? ? ? 1_555 H C 2 N3 ? ? G G 411 H C 418 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? G G 11 N2 ? ? ? 1_555 H C 2 O2 ? ? G G 411 H C 418 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? G G 11 O6 ? ? ? 1_555 H C 2 N4 ? ? G G 411 H C 418 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? G G 12 N1 ? ? ? 1_555 H C 1 N3 ? ? G G 412 H C 417 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? G G 12 N2 ? ? ? 1_555 H C 1 O2 ? ? G G 412 H C 417 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? G G 12 O6 ? ? ? 1_555 H C 1 N4 ? ? G G 412 H C 417 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 6 ? A G 106 ? 1_555 NA ? I NA . ? B NA 911 ? 1_555 O ? S HOH . ? A HOH 603 ? 1_555 86.0 ? 2 O6 ? A G 6 ? A G 106 ? 1_555 NA ? I NA . ? B NA 911 ? 1_555 O6 ? B G 7 ? B G 123 ? 1_555 82.6 ? 3 O ? S HOH . ? A HOH 603 ? 1_555 NA ? I NA . ? B NA 911 ? 1_555 O6 ? B G 7 ? B G 123 ? 1_555 83.7 ? 4 O6 ? A G 6 ? A G 106 ? 1_555 NA ? I NA . ? B NA 911 ? 1_555 O6 ? B G 8 ? B G 124 ? 1_555 90.0 ? 5 O ? S HOH . ? A HOH 603 ? 1_555 NA ? I NA . ? B NA 911 ? 1_555 O6 ? B G 8 ? B G 124 ? 1_555 155.2 ? 6 O6 ? B G 7 ? B G 123 ? 1_555 NA ? I NA . ? B NA 911 ? 1_555 O6 ? B G 8 ? B G 124 ? 1_555 71.5 ? 7 "O5'" ? C G 1 ? C G 201 ? 1_555 NA ? K NA . ? C NA 906 ? 1_555 "O3'" ? C G 1 ? C G 201 ? 1_555 81.5 ? 8 "O5'" ? C G 1 ? C G 201 ? 1_555 NA ? K NA . ? C NA 906 ? 1_555 OP2 ? C C 2 ? C C 202 ? 1_555 70.4 ? 9 "O3'" ? C G 1 ? C G 201 ? 1_555 NA ? K NA . ? C NA 906 ? 1_555 OP2 ? C C 2 ? C C 202 ? 1_555 51.9 ? 10 N1 ? C G 1 ? C G 201 ? 1_555 NA ? L NA . ? C NA 913 ? 1_555 O2 ? D C 14 ? D C 230 ? 1_555 141.9 ? 11 O6 ? C G 6 ? C G 206 ? 1_555 NA ? J NA . ? C NA 904 ? 1_555 O ? U HOH . ? C HOH 631 ? 1_555 71.6 ? 12 O6 ? C G 6 ? C G 206 ? 1_555 NA ? J NA . ? C NA 904 ? 1_555 O6 ? D G 7 ? D G 223 ? 1_555 76.4 ? 13 O ? U HOH . ? C HOH 631 ? 1_555 NA ? J NA . ? C NA 904 ? 1_555 O6 ? D G 7 ? D G 223 ? 1_555 147.6 ? 14 O6 ? C G 6 ? C G 206 ? 1_555 NA ? J NA . ? C NA 904 ? 1_555 O6 ? D G 8 ? D G 224 ? 1_555 96.2 ? 15 O ? U HOH . ? C HOH 631 ? 1_555 NA ? J NA . ? C NA 904 ? 1_555 O6 ? D G 8 ? D G 224 ? 1_555 116.8 ? 16 O6 ? D G 7 ? D G 223 ? 1_555 NA ? J NA . ? C NA 904 ? 1_555 O6 ? D G 8 ? D G 224 ? 1_555 71.3 ? 17 O6 ? C G 6 ? C G 206 ? 1_555 NA ? J NA . ? C NA 904 ? 1_555 O ? V HOH . ? D HOH 601 ? 1_555 96.1 ? 18 O ? U HOH . ? C HOH 631 ? 1_555 NA ? J NA . ? C NA 904 ? 1_555 O ? V HOH . ? D HOH 601 ? 1_555 113.7 ? 19 O6 ? D G 7 ? D G 223 ? 1_555 NA ? J NA . ? C NA 904 ? 1_555 O ? V HOH . ? D HOH 601 ? 1_555 64.3 ? 20 O6 ? D G 8 ? D G 224 ? 1_555 NA ? J NA . ? C NA 904 ? 1_555 O ? V HOH . ? D HOH 601 ? 1_555 129.4 ? 21 "O2'" ? D G 4 ? D G 220 ? 1_555 NA ? M NA . ? D NA 901 ? 1_555 OP2 ? D A 5 ? D A 221 ? 1_555 91.1 ? 22 "O2'" ? D G 4 ? D G 220 ? 1_555 NA ? M NA . ? D NA 901 ? 1_555 "O3'" ? D A 5 ? D A 221 ? 1_555 104.3 ? 23 OP2 ? D A 5 ? D A 221 ? 1_555 NA ? M NA . ? D NA 901 ? 1_555 "O3'" ? D A 5 ? D A 221 ? 1_555 137.9 ? 24 "O2'" ? D G 4 ? D G 220 ? 1_555 NA ? M NA . ? D NA 901 ? 1_555 "O5'" ? D C 6 ? D C 222 ? 1_555 95.1 ? 25 OP2 ? D A 5 ? D A 221 ? 1_555 NA ? M NA . ? D NA 901 ? 1_555 "O5'" ? D C 6 ? D C 222 ? 1_555 161.5 ? 26 "O3'" ? D A 5 ? D A 221 ? 1_555 NA ? M NA . ? D NA 901 ? 1_555 "O5'" ? D C 6 ? D C 222 ? 1_555 56.9 ? 27 "O2'" ? D G 4 ? D G 220 ? 1_555 NA ? M NA . ? D NA 901 ? 1_555 OP1 ? D C 6 ? D C 222 ? 1_555 56.0 ? 28 OP2 ? D A 5 ? D A 221 ? 1_555 NA ? M NA . ? D NA 901 ? 1_555 OP1 ? D C 6 ? D C 222 ? 1_555 139.3 ? 29 "O3'" ? D A 5 ? D A 221 ? 1_555 NA ? M NA . ? D NA 901 ? 1_555 OP1 ? D C 6 ? D C 222 ? 1_555 50.1 ? 30 "O5'" ? D C 6 ? D C 222 ? 1_555 NA ? M NA . ? D NA 901 ? 1_555 OP1 ? D C 6 ? D C 222 ? 1_555 56.5 ? 31 O6 ? E G 6 ? E G 306 ? 1_555 NA ? N NA . ? E NA 912 ? 1_555 O6 ? F G 8 ? F G 324 ? 1_555 98.7 ? 32 "O5'" ? G G 1 ? G G 401 ? 1_555 NA ? O NA . ? G NA 905 ? 1_555 "O3'" ? G G 1 ? G G 401 ? 1_555 76.3 ? 33 "O5'" ? G G 1 ? G G 401 ? 1_555 NA ? O NA . ? G NA 905 ? 1_555 OP2 ? G C 2 ? G C 402 ? 1_555 59.2 ? 34 "O3'" ? G G 1 ? G G 401 ? 1_555 NA ? O NA . ? G NA 905 ? 1_555 OP2 ? G C 2 ? G C 402 ? 1_555 51.0 ? 35 N1 ? G G 1 ? G G 401 ? 1_555 NA ? P NA . ? G NA 914 ? 1_555 O2 ? H C 14 ? H C 430 ? 1_555 110.6 ? 36 O6 ? G G 6 ? G G 406 ? 1_555 NA ? Q NA . ? H NA 902 ? 1_555 O ? Y HOH . ? G HOH 635 ? 1_555 68.1 ? 37 O6 ? G G 6 ? G G 406 ? 1_555 NA ? Q NA . ? H NA 902 ? 1_555 O6 ? H G 7 ? H G 423 ? 1_555 73.6 ? 38 O ? Y HOH . ? G HOH 635 ? 1_555 NA ? Q NA . ? H NA 902 ? 1_555 O6 ? H G 7 ? H G 423 ? 1_555 141.7 ? 39 O6 ? G G 6 ? G G 406 ? 1_555 NA ? Q NA . ? H NA 902 ? 1_555 O6 ? H G 8 ? H G 424 ? 1_555 85.8 ? 40 O ? Y HOH . ? G HOH 635 ? 1_555 NA ? Q NA . ? H NA 902 ? 1_555 O6 ? H G 8 ? H G 424 ? 1_555 104.8 ? 41 O6 ? H G 7 ? H G 423 ? 1_555 NA ? Q NA . ? H NA 902 ? 1_555 O6 ? H G 8 ? H G 424 ? 1_555 73.4 ? 42 O6 ? G G 6 ? G G 406 ? 1_555 NA ? Q NA . ? H NA 902 ? 1_555 O ? Z HOH . ? H HOH 602 ? 1_555 93.8 ? 43 O ? Y HOH . ? G HOH 635 ? 1_555 NA ? Q NA . ? H NA 902 ? 1_555 O ? Z HOH . ? H HOH 602 ? 1_555 118.1 ? 44 O6 ? H G 7 ? H G 423 ? 1_555 NA ? Q NA . ? H NA 902 ? 1_555 O ? Z HOH . ? H HOH 602 ? 1_555 62.1 ? 45 O6 ? H G 8 ? H G 424 ? 1_555 NA ? Q NA . ? H NA 902 ? 1_555 O ? Z HOH . ? H HOH 602 ? 1_555 133.5 ? 46 "O2'" ? H G 4 ? H G 420 ? 1_555 NA ? R NA . ? H NA 903 ? 1_555 OP2 ? H A 5 ? H A 421 ? 1_555 103.5 ? 47 "O2'" ? H G 4 ? H G 420 ? 1_555 NA ? R NA . ? H NA 903 ? 1_555 "O5'" ? H C 6 ? H C 422 ? 1_555 83.9 ? 48 OP2 ? H A 5 ? H A 421 ? 1_555 NA ? R NA . ? H NA 903 ? 1_555 "O5'" ? H C 6 ? H C 422 ? 1_555 157.4 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software D NA 901 ? 3 'BINDING SITE FOR RESIDUE NA D 901' AC2 Software H NA 902 ? 5 'BINDING SITE FOR RESIDUE NA H 902' AC3 Software H NA 903 ? 3 'BINDING SITE FOR RESIDUE NA H 903' AC4 Software C NA 904 ? 5 'BINDING SITE FOR RESIDUE NA C 904' AC5 Software G NA 905 ? 2 'BINDING SITE FOR RESIDUE NA G 905' AC6 Software C NA 906 ? 2 'BINDING SITE FOR RESIDUE NA C 906' AC7 Software B NA 911 ? 4 'BINDING SITE FOR RESIDUE NA B 911' AC8 Software E NA 912 ? 4 'BINDING SITE FOR RESIDUE NA E 912' AC9 Software C NA 913 ? 5 'BINDING SITE FOR RESIDUE NA C 913' BC1 Software G NA 914 ? 5 'BINDING SITE FOR RESIDUE NA G 914' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 G D 4 ? G D 220 . ? 1_555 ? 2 AC1 3 A D 5 ? A D 221 . ? 1_555 ? 3 AC1 3 C D 6 ? C D 222 . ? 1_555 ? 4 AC2 5 G G 6 ? G G 406 . ? 1_555 ? 5 AC2 5 HOH Y . ? HOH G 635 . ? 1_555 ? 6 AC2 5 G H 7 ? G H 423 . ? 1_555 ? 7 AC2 5 G H 8 ? G H 424 . ? 1_555 ? 8 AC2 5 HOH Z . ? HOH H 602 . ? 1_555 ? 9 AC3 3 G H 4 ? G H 420 . ? 1_555 ? 10 AC3 3 A H 5 ? A H 421 . ? 1_555 ? 11 AC3 3 C H 6 ? C H 422 . ? 1_555 ? 12 AC4 5 G C 6 ? G C 206 . ? 1_555 ? 13 AC4 5 HOH U . ? HOH C 631 . ? 1_555 ? 14 AC4 5 G D 7 ? G D 223 . ? 1_555 ? 15 AC4 5 G D 8 ? G D 224 . ? 1_555 ? 16 AC4 5 HOH V . ? HOH D 601 . ? 1_555 ? 17 AC5 2 G G 1 ? G G 401 . ? 1_555 ? 18 AC5 2 C G 2 ? C G 402 . ? 1_555 ? 19 AC6 2 G C 1 ? G C 201 . ? 1_555 ? 20 AC6 2 C C 2 ? C C 202 . ? 1_555 ? 21 AC7 4 G A 6 ? G A 106 . ? 1_555 ? 22 AC7 4 HOH S . ? HOH A 603 . ? 1_555 ? 23 AC7 4 G B 7 ? G B 123 . ? 1_555 ? 24 AC7 4 G B 8 ? G B 124 . ? 1_555 ? 25 AC8 4 G E 6 ? G E 306 . ? 1_555 ? 26 AC8 4 G F 7 ? G F 323 . ? 1_555 ? 27 AC8 4 G F 8 ? G F 324 . ? 1_555 ? 28 AC8 4 A F 10 ? A F 326 . ? 1_555 ? 29 AC9 5 C B 1 ? C B 117 . ? 1_555 ? 30 AC9 5 G C 1 ? G C 201 . ? 1_555 ? 31 AC9 5 C C 2 ? C C 202 . ? 1_555 ? 32 AC9 5 C D 14 ? C D 230 . ? 1_555 ? 33 AC9 5 U G 3 ? U G 403 . ? 1_445 ? 34 BC1 5 U C 3 ? U C 203 . ? 1_665 ? 35 BC1 5 C F 1 ? C F 317 . ? 1_555 ? 36 BC1 5 G G 1 ? G G 401 . ? 1_555 ? 37 BC1 5 C G 2 ? C G 402 . ? 1_555 ? 38 BC1 5 C H 14 ? C H 430 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O2 _pdbx_validate_close_contact.auth_asym_id_1 G _pdbx_validate_close_contact.auth_comp_id_1 C _pdbx_validate_close_contact.auth_seq_id_1 402 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N2 _pdbx_validate_close_contact.auth_asym_id_2 H _pdbx_validate_close_contact.auth_comp_id_2 G _pdbx_validate_close_contact.auth_seq_id_2 429 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 "O2'" D G 229 ? ? 1_555 "O2'" H G 429 ? ? 1_445 2.12 2 1 "O2'" C C 202 ? ? 1_555 "O2'" G C 402 ? ? 1_445 2.12 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G B 124 ? ? 0.061 'SIDE CHAIN' 2 1 G F 324 ? ? 0.063 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 NA NA NA N N 114 U OP3 O N N 115 U P P N N 116 U OP1 O N N 117 U OP2 O N N 118 U "O5'" O N N 119 U "C5'" C N N 120 U "C4'" C N R 121 U "O4'" O N N 122 U "C3'" C N S 123 U "O3'" O N N 124 U "C2'" C N R 125 U "O2'" O N N 126 U "C1'" C N R 127 U N1 N N N 128 U C2 C N N 129 U O2 O N N 130 U N3 N N N 131 U C4 C N N 132 U O4 O N N 133 U C5 C N N 134 U C6 C N N 135 U HOP3 H N N 136 U HOP2 H N N 137 U "H5'" H N N 138 U "H5''" H N N 139 U "H4'" H N N 140 U "H3'" H N N 141 U "HO3'" H N N 142 U "H2'" H N N 143 U "HO2'" H N N 144 U "H1'" H N N 145 U H3 H N N 146 U H5 H N N 147 U H6 H N N 148 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 U OP3 P sing N N 118 U OP3 HOP3 sing N N 119 U P OP1 doub N N 120 U P OP2 sing N N 121 U P "O5'" sing N N 122 U OP2 HOP2 sing N N 123 U "O5'" "C5'" sing N N 124 U "C5'" "C4'" sing N N 125 U "C5'" "H5'" sing N N 126 U "C5'" "H5''" sing N N 127 U "C4'" "O4'" sing N N 128 U "C4'" "C3'" sing N N 129 U "C4'" "H4'" sing N N 130 U "O4'" "C1'" sing N N 131 U "C3'" "O3'" sing N N 132 U "C3'" "C2'" sing N N 133 U "C3'" "H3'" sing N N 134 U "O3'" "HO3'" sing N N 135 U "C2'" "O2'" sing N N 136 U "C2'" "C1'" sing N N 137 U "C2'" "H2'" sing N N 138 U "O2'" "HO2'" sing N N 139 U "C1'" N1 sing N N 140 U "C1'" "H1'" sing N N 141 U N1 C2 sing N N 142 U N1 C6 sing N N 143 U C2 O2 doub N N 144 U C2 N3 sing N N 145 U N3 C4 sing N N 146 U N3 H3 sing N N 147 U C4 O4 doub N N 148 U C4 C5 sing N N 149 U C5 C6 doub N N 150 U C5 H5 sing N N 151 U C6 H6 sing N N 152 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1DUQ 'double helix' 1DUQ 'a-form double helix' 1DUQ 'bulge loop' 1DUQ 'mismatched base pair' 1DUQ 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 14 1_555 -0.221 -0.222 0.277 -1.059 -10.458 2.933 1 A_G101:C130_B A 101 ? B 130 ? 19 1 1 A C 2 1_555 B G 13 1_555 0.111 -0.274 0.119 -1.324 -12.377 -0.987 2 A_C102:G129_B A 102 ? B 129 ? 19 1 1 A U 3 1_555 B A 12 1_555 -0.115 -0.293 0.006 3.166 -5.304 0.044 3 A_U103:A128_B A 103 ? B 128 ? 20 1 1 A G 4 1_555 B C 11 1_555 -0.178 -0.089 -0.022 -6.510 -20.306 3.357 4 A_G104:C127_B A 104 ? B 127 ? 19 1 1 A G 5 1_555 B A 10 1_555 -0.190 1.530 -0.089 -19.116 -5.517 -17.594 5 A_G105:A126_B A 105 ? B 126 ? 8 ? 1 A G 6 1_555 B G 8 1_555 1.649 3.677 0.294 -18.178 -6.545 -83.202 6 A_G106:G124_B A 106 ? B 124 ? 6 ? 1 A C 7 1_555 B G 7 1_555 0.477 -0.327 -0.125 7.549 -13.417 0.697 7 A_C107:G123_B A 107 ? B 123 ? 19 1 1 A G 8 1_555 B C 6 1_555 0.014 -0.129 0.060 -2.004 -10.363 1.140 8 A_G108:C122_B A 108 ? B 122 ? 19 1 1 A C 9 1_555 B G 4 1_555 0.260 -0.186 0.261 -1.259 -10.005 1.500 9 A_C109:G120_B A 109 ? B 120 ? 19 1 1 A A 10 1_555 B U 3 1_555 -0.172 -0.202 0.445 3.778 -10.686 3.097 10 A_A110:U119_B A 110 ? B 119 ? 20 1 1 A G 11 1_555 B C 2 1_555 -0.108 -0.262 0.155 -2.001 -10.401 -3.652 11 A_G111:C118_B A 111 ? B 118 ? 19 1 1 A G 12 1_555 B C 1 1_555 0.071 -0.236 -0.490 -15.728 -17.029 -0.667 12 A_G112:C117_B A 112 ? B 117 ? 19 1 1 C C 2 1_555 D G 13 1_555 1.253 -0.481 0.135 -4.713 -18.073 13.332 13 C_C202:G229_D C 202 ? D 229 ? 19 1 1 C U 3 1_555 D A 12 1_555 0.297 -0.236 0.548 -10.131 -7.682 7.946 14 C_U203:A228_D C 203 ? D 228 ? 20 1 1 C G 4 1_555 D C 11 1_555 0.137 -0.155 0.217 5.354 -11.238 1.456 15 C_G204:C227_D C 204 ? D 227 ? 19 1 1 C G 6 1_555 D G 8 1_555 1.626 3.441 0.398 -9.872 -7.413 -86.089 16 C_G206:G224_D C 206 ? D 224 ? 6 ? 1 C C 7 1_555 D G 7 1_555 0.694 -0.227 0.341 6.208 -16.517 3.627 17 C_C207:G223_D C 207 ? D 223 ? 19 1 1 C G 8 1_555 D C 6 1_555 0.118 -0.235 0.159 -1.136 -13.418 4.140 18 C_G208:C222_D C 208 ? D 222 ? 19 1 1 C C 9 1_555 D G 4 1_555 0.332 -0.264 0.748 -10.043 -5.720 2.581 19 C_C209:G220_D C 209 ? D 220 ? 19 1 1 C A 10 1_555 D U 3 1_555 0.459 -0.107 0.230 -1.127 -13.265 3.638 20 C_A210:U219_D C 210 ? D 219 ? 20 1 1 C G 11 1_555 D C 2 1_555 -0.504 -0.089 0.271 1.763 -19.602 4.449 21 C_G211:C218_D C 211 ? D 218 ? 19 1 1 C G 12 1_555 D C 1 1_555 -0.116 -0.362 -0.006 -9.876 -17.935 0.697 22 C_G212:C217_D C 212 ? D 217 ? 19 1 1 E G 1 1_555 F C 14 1_555 -0.278 -0.229 0.243 -0.551 -10.151 3.194 23 E_G301:C330_F E 301 ? F 330 ? 19 1 1 E C 2 1_555 F G 13 1_555 -0.041 -0.278 0.305 -3.331 -12.105 -1.979 24 E_C302:G329_F E 302 ? F 329 ? 19 1 1 E U 3 1_555 F A 12 1_555 -0.003 -0.298 -0.035 2.569 -5.232 0.625 25 E_U303:A328_F E 303 ? F 328 ? 20 1 1 E G 4 1_555 F C 11 1_555 -0.133 -0.100 -0.050 -6.491 -23.002 2.739 26 E_G304:C327_F E 304 ? F 327 ? 19 1 1 E G 5 1_555 F A 10 1_555 -0.134 1.585 -0.090 -21.157 -5.589 -17.298 27 E_G305:A326_F E 305 ? F 326 ? 8 ? 1 E G 6 1_555 F G 8 1_555 1.596 3.715 0.228 -17.318 -6.429 -83.709 28 E_G306:G324_F E 306 ? F 324 ? 6 ? 1 E C 7 1_555 F G 7 1_555 0.408 -0.325 -0.185 7.505 -11.899 -0.965 29 E_C307:G323_F E 307 ? F 323 ? 19 1 1 E G 8 1_555 F C 6 1_555 -0.075 -0.108 -0.062 -1.883 -10.691 1.868 30 E_G308:C322_F E 308 ? F 322 ? 19 1 1 E C 9 1_555 F G 4 1_555 0.275 -0.148 0.363 -0.890 -11.268 2.556 31 E_C309:G320_F E 309 ? F 320 ? 19 1 1 E A 10 1_555 F U 3 1_555 -0.059 -0.208 0.453 4.136 -11.097 3.255 32 E_A310:U319_F E 310 ? F 319 ? 20 1 1 E G 11 1_555 F C 2 1_555 -0.070 -0.238 0.217 -2.889 -10.604 -3.895 33 E_G311:C318_F E 311 ? F 318 ? 19 1 1 E G 12 1_555 F C 1 1_555 0.036 -0.233 -0.527 -16.981 -17.440 -0.536 34 E_G312:C317_F E 312 ? F 317 ? 19 1 1 G C 2 1_555 H G 13 1_555 0.466 -0.408 0.096 -2.615 -16.952 12.081 35 G_C402:G429_H G 402 ? H 429 ? 22 1 1 G U 3 1_555 H A 12 1_555 0.003 -0.254 0.521 -11.731 -11.926 4.648 36 G_U403:A428_H G 403 ? H 428 ? 20 1 1 G G 4 1_555 H C 11 1_555 -0.036 -0.107 0.116 -1.080 -12.520 6.751 37 G_G404:C427_H G 404 ? H 427 ? 19 1 1 G G 6 1_555 H G 8 1_555 1.439 3.328 0.500 -8.081 -9.359 -88.584 38 G_G406:G424_H G 406 ? H 424 ? 6 ? 1 G C 7 1_555 H G 7 1_555 0.348 -0.278 0.066 7.860 -17.961 2.162 39 G_C407:G423_H G 407 ? H 423 ? 19 1 1 G G 8 1_555 H C 6 1_555 -0.158 -0.163 0.056 -1.487 -13.243 5.167 40 G_G408:C422_H G 408 ? H 422 ? 19 1 1 G C 9 1_555 H G 4 1_555 0.264 -0.233 0.254 -6.501 -7.512 3.164 41 G_C409:G420_H G 409 ? H 420 ? 19 1 1 G A 10 1_555 H U 3 1_555 0.693 -0.124 0.339 2.070 -10.351 1.913 42 G_A410:U419_H G 410 ? H 419 ? 20 1 1 G G 11 1_555 H C 2 1_555 -0.318 -0.272 0.106 -2.696 -16.748 1.786 43 G_G411:C418_H G 411 ? H 418 ? 19 1 1 G G 12 1_555 H C 1 1_555 -0.301 -0.210 -0.043 -9.022 -16.352 2.850 44 G_G412:C417_H G 412 ? H 417 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 14 1_555 A C 2 1_555 B G 13 1_555 -0.525 -1.620 3.166 -0.709 3.389 37.926 -2.891 0.720 3.025 5.202 1.088 38.078 1 AA_G101C102:G129C130_BB A 101 ? B 130 ? A 102 ? B 129 ? 1 A C 2 1_555 B G 13 1_555 A U 3 1_555 B A 12 1_555 -0.263 -1.452 3.184 -0.120 3.825 26.672 -4.040 0.536 2.952 8.238 0.259 26.940 2 AA_C102U103:A128G129_BB A 102 ? B 129 ? A 103 ? B 128 ? 1 A U 3 1_555 B A 12 1_555 A G 4 1_555 B C 11 1_555 1.074 -1.583 3.339 3.200 11.447 32.253 -4.402 -1.339 2.727 19.786 -5.532 34.319 3 AA_U103G104:C127A128_BB A 103 ? B 128 ? A 104 ? B 127 ? 1 A G 4 1_555 B C 11 1_555 A G 5 1_555 B A 10 1_555 -1.256 -2.560 3.314 -0.189 6.841 35.704 -5.006 1.990 2.798 11.032 0.306 36.333 4 AA_G104G105:A126C127_BB A 104 ? B 127 ? A 105 ? B 126 ? 1 A G 5 1_555 B A 10 1_555 A G 6 1_555 B G 8 1_555 0.966 -3.085 2.892 4.845 11.647 71.402 -2.933 -0.686 2.484 9.902 -4.120 72.362 5 AA_G105G106:G124A126_BB A 105 ? B 126 ? A 106 ? B 124 ? 1 A G 6 1_555 B G 8 1_555 A C 7 1_555 B G 7 1_555 -0.632 1.294 3.099 1.146 6.434 -15.620 -8.075 -1.491 2.415 -22.435 3.996 -16.924 6 AA_G106C107:G123G124_BB A 106 ? B 124 ? A 107 ? B 123 ? 1 A C 7 1_555 B G 7 1_555 A G 8 1_555 B C 6 1_555 0.281 -1.819 3.319 -0.314 15.175 27.550 -5.869 -0.571 2.057 29.224 0.604 31.383 7 AA_C107G108:C122G123_BB A 107 ? B 123 ? A 108 ? B 122 ? 1 A G 8 1_555 B C 6 1_555 A C 9 1_555 B G 4 1_555 0.787 -1.421 3.116 -0.037 4.823 39.433 -2.612 -1.162 2.928 7.115 0.055 39.715 8 AA_G108C109:G120C122_BB A 108 ? B 122 ? A 109 ? B 120 ? 1 A C 9 1_555 B G 4 1_555 A A 10 1_555 B U 3 1_555 -0.044 -1.847 2.909 -2.920 8.174 28.858 -4.916 -0.401 2.305 15.953 5.698 30.108 9 AA_C109A110:U119G120_BB A 109 ? B 120 ? A 110 ? B 119 ? 1 A A 10 1_555 B U 3 1_555 A G 11 1_555 B C 2 1_555 0.037 -2.124 3.304 1.483 3.333 31.261 -4.525 0.202 3.066 6.158 -2.739 31.468 10 AA_A110G111:C118U119_BB A 110 ? B 119 ? A 111 ? B 118 ? 1 A G 11 1_555 B C 2 1_555 A G 12 1_555 B C 1 1_555 -0.118 -1.464 3.618 5.902 10.141 35.883 -3.641 0.983 3.052 15.943 -9.279 37.692 11 AA_G111G112:C117C118_BB A 111 ? B 118 ? A 112 ? B 117 ? 1 A G 12 1_555 B C 1 1_555 C C 2 1_555 D G 13 1_555 -0.599 -2.698 6.281 -1.017 14.452 31.479 -8.457 0.732 4.651 25.044 1.763 34.576 12 AC_G112C202:G229C117_DB A 112 ? B 117 ? C 202 ? D 229 ? 1 C C 2 1_555 D G 13 1_555 C U 3 1_555 D A 12 1_555 -0.100 -0.638 3.294 -3.804 7.502 27.239 -2.985 -0.652 3.001 15.468 7.842 28.485 13 CC_C202U203:A228G229_DD C 202 ? D 229 ? C 203 ? D 228 ? 1 C U 3 1_555 D A 12 1_555 C G 4 1_555 D C 11 1_555 0.639 -1.077 2.775 3.053 6.078 25.316 -3.729 -0.731 2.510 13.558 -6.811 26.199 14 CC_U203G204:C227A228_DD C 203 ? D 228 ? C 204 ? D 227 ? 1 C G 4 1_555 D C 11 1_555 C G 6 1_555 D G 8 1_555 0.121 -4.762 5.738 4.823 14.932 115.864 -3.064 0.014 5.334 8.789 -2.839 116.535 15 CC_G204G206:G224C227_DD C 204 ? D 227 ? C 206 ? D 224 ? 1 C G 6 1_555 D G 8 1_555 C C 7 1_555 D G 7 1_555 -0.453 1.189 3.172 1.386 7.088 -12.054 -10.771 -0.698 2.171 -30.431 5.950 -14.045 16 CC_G206C207:G223G224_DD C 206 ? D 224 ? C 207 ? D 223 ? 1 C C 7 1_555 D G 7 1_555 C G 8 1_555 D C 6 1_555 0.553 -2.251 3.191 0.516 8.298 28.808 -5.868 -0.976 2.470 16.256 -1.011 29.960 17 CC_C207G208:C222G223_DD C 207 ? D 223 ? C 208 ? D 222 ? 1 C G 8 1_555 D C 6 1_555 C C 9 1_555 D G 4 1_555 0.744 -1.620 3.336 -4.251 1.499 43.675 -2.309 -1.399 3.199 2.008 5.696 43.895 18 CC_G208C209:G220C222_DD C 208 ? D 222 ? C 209 ? D 220 ? 1 C C 9 1_555 D G 4 1_555 C A 10 1_555 D U 3 1_555 -0.239 -1.293 2.784 3.961 9.139 32.747 -3.348 0.905 2.306 15.762 -6.830 34.189 19 CC_C209A210:U219G220_DD C 209 ? D 220 ? C 210 ? D 219 ? 1 C A 10 1_555 D U 3 1_555 C G 11 1_555 D C 2 1_555 0.298 -1.351 3.072 0.731 5.465 28.419 -3.795 -0.451 2.775 11.001 -1.471 28.939 20 CC_A210G211:C218U219_DD C 210 ? D 219 ? C 211 ? D 218 ? 1 C G 11 1_555 D C 2 1_555 C G 12 1_555 D C 1 1_555 0.341 -1.460 3.493 4.261 9.897 35.776 -3.614 0.040 3.017 15.677 -6.749 37.313 21 CC_G211G212:C217C218_DD C 211 ? D 218 ? C 212 ? D 217 ? 1 E G 1 1_555 F C 14 1_555 E C 2 1_555 F G 13 1_555 -0.593 -1.674 3.207 -2.856 5.181 37.683 -3.187 0.563 2.994 7.961 4.388 38.128 22 EE_G301C302:G329C330_FF E 301 ? F 330 ? E 302 ? F 329 ? 1 E C 2 1_555 F G 13 1_555 E U 3 1_555 F A 12 1_555 -0.259 -1.439 3.138 1.164 1.790 28.054 -3.356 0.790 3.029 3.685 -2.396 28.134 23 EE_C302U303:A328G329_FF E 302 ? F 329 ? E 303 ? F 328 ? 1 E U 3 1_555 F A 12 1_555 E G 4 1_555 F C 11 1_555 1.020 -1.590 3.326 3.004 11.866 31.965 -4.486 -1.285 2.667 20.626 -5.222 34.171 24 EE_U303G304:C327A328_FF E 303 ? F 328 ? E 304 ? F 327 ? 1 E G 4 1_555 F C 11 1_555 E G 5 1_555 F A 10 1_555 -1.276 -2.539 3.357 -0.414 7.351 35.696 -5.034 1.987 2.811 11.836 0.667 36.424 25 EE_G304G305:A326C327_FF E 304 ? F 327 ? E 305 ? F 326 ? 1 E G 5 1_555 F A 10 1_555 E G 6 1_555 F G 8 1_555 0.945 -3.100 2.854 4.097 10.704 70.958 -2.940 -0.693 2.471 9.161 -3.507 71.757 26 EE_G305G306:G324A326_FF E 305 ? F 326 ? E 306 ? F 324 ? 1 E G 6 1_555 F G 8 1_555 E C 7 1_555 F G 7 1_555 -0.660 1.265 3.102 1.659 6.715 -16.062 -7.785 -1.277 2.432 -22.708 5.611 -17.479 27 EE_G306C307:G323G324_FF E 306 ? F 324 ? E 307 ? F 323 ? 1 E C 7 1_555 F G 7 1_555 E G 8 1_555 F C 6 1_555 0.338 -1.744 3.327 0.516 15.588 27.255 -5.828 -0.540 2.057 30.151 -0.999 31.329 28 EE_C307G308:C322G323_FF E 307 ? F 323 ? E 308 ? F 322 ? 1 E G 8 1_555 F C 6 1_555 E C 9 1_555 F G 4 1_555 0.832 -1.398 3.106 -1.389 4.267 40.138 -2.469 -1.349 2.920 6.194 2.016 40.378 29 EE_G308C309:G320C322_FF E 308 ? F 322 ? E 309 ? F 320 ? 1 E C 9 1_555 F G 4 1_555 E A 10 1_555 F U 3 1_555 -0.089 -1.850 2.877 -1.984 8.965 29.437 -4.881 -0.143 2.231 17.125 3.790 30.806 30 EE_C309A310:U319G320_FF E 309 ? F 320 ? E 310 ? F 319 ? 1 E A 10 1_555 F U 3 1_555 E G 11 1_555 F C 2 1_555 0.002 -2.133 3.346 0.737 3.457 30.537 -4.693 0.138 3.090 6.536 -1.394 30.736 31 EE_A310G311:C318U319_FF E 310 ? F 319 ? E 311 ? F 318 ? 1 E G 11 1_555 F C 2 1_555 E G 12 1_555 F C 1 1_555 -0.140 -1.470 3.592 6.131 10.640 35.787 -3.692 1.034 2.988 16.719 -9.635 37.770 32 EE_G311G312:C317C318_FF E 311 ? F 318 ? E 312 ? F 317 ? 1 E G 12 1_555 F C 1 1_555 G C 2 1_555 H G 13 1_555 -0.306 -2.478 6.142 -1.797 11.913 27.139 -9.190 -0.059 4.674 23.945 3.612 29.647 33 EG_G312C402:G429C317_HF E 312 ? F 317 ? G 402 ? H 429 ? 1 G C 2 1_555 H G 13 1_555 G U 3 1_555 H A 12 1_555 -0.298 -0.664 3.507 -3.354 8.020 28.993 -2.983 -0.143 3.226 15.582 6.516 30.242 34 GG_C402U403:A428G429_HH G 402 ? H 429 ? G 403 ? H 428 ? 1 G U 3 1_555 H A 12 1_555 G G 4 1_555 H C 11 1_555 1.042 -1.022 2.823 3.786 8.862 26.959 -3.751 -1.390 2.489 18.283 -7.810 28.600 35 GG_U403G404:C427A428_HH G 403 ? H 428 ? G 404 ? H 427 ? 1 G G 4 1_555 H C 11 1_555 G G 6 1_555 H G 8 1_555 0.085 -4.480 5.659 1.835 15.024 116.607 -2.882 -0.018 5.281 8.810 -1.076 117.222 36 GG_G404G406:G424C427_HH G 404 ? H 427 ? G 406 ? H 424 ? 1 G G 6 1_555 H G 8 1_555 G C 7 1_555 H G 7 1_555 -0.540 1.113 3.026 4.892 7.834 -13.188 -8.860 1.119 2.107 -29.790 18.603 -16.089 37 GG_G406C407:G423G424_HH G 406 ? H 424 ? G 407 ? H 423 ? 1 G C 7 1_555 H G 7 1_555 G G 8 1_555 H C 6 1_555 0.649 -2.057 3.382 -1.617 7.863 28.684 -5.563 -1.584 2.696 15.492 3.185 29.764 38 GG_C407G408:C422G423_HH G 407 ? H 423 ? G 408 ? H 422 ? 1 G G 8 1_555 H C 6 1_555 G C 9 1_555 H G 4 1_555 0.694 -1.454 3.304 -2.571 2.364 44.810 -2.115 -1.139 3.185 3.095 3.366 44.938 39 GG_G408C409:G420C422_HH G 408 ? H 422 ? G 409 ? H 420 ? 1 G C 9 1_555 H G 4 1_555 G A 10 1_555 H U 3 1_555 -0.415 -1.334 2.821 0.454 11.081 33.839 -3.479 0.732 2.280 18.433 -0.756 35.559 40 GG_C409A410:U419G420_HH G 409 ? H 420 ? G 410 ? H 419 ? 1 G A 10 1_555 H U 3 1_555 G G 11 1_555 H C 2 1_555 0.192 -1.409 3.362 2.067 4.729 27.532 -4.025 0.090 3.087 9.827 -4.295 28.003 41 GG_A410G411:C418U419_HH G 410 ? H 419 ? G 411 ? H 418 ? 1 G G 11 1_555 H C 2 1_555 G G 12 1_555 H C 1 1_555 0.597 -1.532 3.291 4.332 9.268 34.154 -3.797 -0.372 2.845 15.358 -7.179 35.609 42 GG_G411G412:C417C418_HH G 411 ? H 418 ? G 412 ? H 417 ? # _atom_sites.entry_id 1DUQ _atom_sites.fract_transf_matrix[1][1] 0.041679 _atom_sites.fract_transf_matrix[1][2] 0.009506 _atom_sites.fract_transf_matrix[1][3] 0.004366 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019019 _atom_sites.fract_transf_matrix[2][3] 0.008933 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017068 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P # loop_