data_1DXN # _entry.id 1DXN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.321 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1DXN PDBE EBI-4525 WWPDB D_1290004525 BMRB 4618 # _pdbx_database_related.db_id 4618 _pdbx_database_related.details . _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DXN _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2000-01-11 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hsu, S.-T.' 1 'Chou, M.-T.' 2 'Cheng, J.-W.' 3 # _citation.id primary _citation.title 'Hydration of [D(Cgc)R(Aaa)D(Tttgcg)]2' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 295 _citation.page_first 1129 _citation.page_last ? _citation.year 2000 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10653692 _citation.pdbx_database_id_DOI 10.1006/JMBI.1999.3388 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hsu, S.-T.' 1 ? primary 'Chou, M.-T.' 2 ? primary 'Chou, S.-H.' 3 ? primary 'Huang, W.-C.' 4 ? primary 'Cheng, J.-W.' 5 ? # _cell.entry_id 1DXN _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DXN _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description ;DNA/RNA (5'-D(*CP*GP*CP)-R(*AP*AP*AP)-D(*TP*TP*TP*GP*CP*G)-3') ; _entity.formula_weight 3710.401 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polydeoxyribonucleotide/polyribonucleotide hybrid' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DG)(DC)AAA(DT)(DT)(DT)(DG)(DC)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGCAAATTTGCG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DG n 1 3 DC n 1 4 A n 1 5 A n 1 6 A n 1 7 DT n 1 8 DT n 1 9 DT n 1 10 DG n 1 11 DC n 1 12 DG n # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 1DXN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession 1DXN _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1DXN A 1 ? 12 ? 1DXN 1 ? 12 ? 1 12 2 1 1DXN B 1 ? 12 ? 1DXN 13 ? 24 ? 13 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # _pdbx_nmr_exptl.experiment_id 1 _pdbx_nmr_exptl.conditions_id 1 _pdbx_nmr_exptl.type 'THE STRUCTURE WAS DETERMINED FROM 2D NMR SPECTROSCOPY WITH UNLABELED SAMPLE' _pdbx_nmr_exptl.solution_id 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 300 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '100% D2O OR 90% H2O:10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 1DXN _pdbx_nmr_refine.method 'SA, MD, MATRIX RELAXATION REFINEMENT' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1DXN _pdbx_nmr_ensemble.conformers_calculated_total_number ? _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST ENERGY' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR 3.851 BRUNGER 1 'structure solution' X-PLOR ? ? 2 # _exptl.entry_id 1DXN _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1DXN _struct.title 'The Solution Structure of [d(CGC)r(aaa)d(TTTGCG)]2: Hybrid Junctions Flanked by DNA Duplexes' _struct.pdbx_descriptor "5'-D(P*CP*GP*C)-R(P*AP*AP*A)-D(P*TP*TP*TP*GP*CP*G)-3'" _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DXN _struct_keywords.pdbx_keywords 'DNA-RNA HYBRID' _struct_keywords.text 'DNA-RNA HYBRID, DNA/RNA CHIMERIC HYBRID DUPLEX, DNA/RNA HYBRID, CHIMERIC DUPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 12 N1 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 12 O6 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 12 N2 ? ? A DC 1 B DG 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 2 B DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 3 B DG 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A A 4 N1 ? ? ? 1_555 B DT 9 N3 ? ? A A 4 B DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? A A 4 N6 ? ? ? 1_555 B DT 9 O4 ? ? A A 4 B DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? A A 5 N1 ? ? ? 1_555 B DT 8 N3 ? ? A A 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? A A 5 N6 ? ? ? 1_555 B DT 8 O4 ? ? A A 5 B DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? A A 6 N1 ? ? ? 1_555 B DT 7 N3 ? ? A A 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? A A 6 N6 ? ? ? 1_555 B DT 7 O4 ? ? A A 6 B DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B A 6 N1 ? ? A DT 7 B A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B A 6 N6 ? ? A DT 7 B A 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B A 5 N1 ? ? A DT 8 B A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B A 5 N6 ? ? A DT 8 B A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B A 4 N1 ? ? A DT 9 B A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B A 4 N6 ? ? A DT 9 B A 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog23 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog24 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 10 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog25 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog26 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog27 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 11 B DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog28 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog29 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog30 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 12 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1DXN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1DXN _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 A 4 4 4 A A A . n A 1 5 A 5 5 5 A A A . n A 1 6 A 6 6 6 A A A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DC 11 11 11 DC DC A . n A 1 12 DG 12 12 12 DG DG A . n B 1 1 DC 1 13 13 DC DC B . n B 1 2 DG 2 14 14 DG DG B . n B 1 3 DC 3 15 15 DC DC B . n B 1 4 A 4 16 16 A A B . n B 1 5 A 5 17 17 A A B . n B 1 6 A 6 18 18 A A B . n B 1 7 DT 7 19 19 DT DT B . n B 1 8 DT 8 20 20 DT DT B . n B 1 9 DT 9 21 21 DT DT B . n B 1 10 DG 10 22 22 DG DG B . n B 1 11 DC 11 23 23 DC DC B . n B 1 12 DG 12 24 24 DG DG B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-04-11 2 'Structure model' 1 1 2011-05-07 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-01-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_database_status 2 4 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.status_code_cs' 2 4 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_entry_details.entry_id 1DXN _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;RESIDUES 4, 5, 6 IN CHAIN A AND 16, 17, 18 IN CHAIN B ARE ARE RNA, THE REMAINING RESIDUES ARE ALL DNA ; # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.350 1.305 0.045 0.006 N 2 1 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.538 1.496 0.042 0.006 N 3 1 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.540 1.496 0.044 0.006 N 4 1 N7 A DG 10 ? ? C8 A DG 10 ? ? 1.352 1.305 0.047 0.006 N 5 1 N7 A DG 12 ? ? C8 A DG 12 ? ? 1.350 1.305 0.045 0.006 N 6 1 "C3'" B DC 13 ? ? "C2'" B DC 13 ? ? 1.606 1.518 0.088 0.012 N 7 1 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.353 1.305 0.048 0.006 N 8 1 C5 B DT 19 ? ? C7 B DT 19 ? ? 1.538 1.496 0.042 0.006 N 9 1 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.540 1.496 0.044 0.006 N 10 1 C5 B DT 21 ? ? C7 B DT 21 ? ? 1.533 1.496 0.037 0.006 N 11 1 N7 B DG 22 ? ? C8 B DG 22 ? ? 1.352 1.305 0.047 0.006 N 12 1 N7 B DG 24 ? ? C8 B DG 24 ? ? 1.348 1.305 0.043 0.006 N 13 2 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 1.600 1.518 0.082 0.012 N 14 2 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.353 1.305 0.048 0.006 N 15 2 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.539 1.496 0.043 0.006 N 16 2 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.539 1.496 0.043 0.006 N 17 2 C5 A DT 9 ? ? C7 A DT 9 ? ? 1.533 1.496 0.037 0.006 N 18 2 N7 A DG 10 ? ? C8 A DG 10 ? ? 1.353 1.305 0.048 0.006 N 19 2 N7 A DG 12 ? ? C8 A DG 12 ? ? 1.346 1.305 0.041 0.006 N 20 2 "C3'" B DC 13 ? ? "C2'" B DC 13 ? ? 1.605 1.518 0.087 0.012 N 21 2 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.351 1.305 0.046 0.006 N 22 2 C5 B DT 19 ? ? C7 B DT 19 ? ? 1.541 1.496 0.045 0.006 N 23 2 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.540 1.496 0.044 0.006 N 24 2 C5 B DT 21 ? ? C7 B DT 21 ? ? 1.533 1.496 0.037 0.006 N 25 2 N7 B DG 22 ? ? C8 B DG 22 ? ? 1.353 1.305 0.048 0.006 N 26 2 N7 B DG 24 ? ? C8 B DG 24 ? ? 1.348 1.305 0.043 0.006 N 27 3 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 1.606 1.518 0.088 0.012 N 28 3 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.351 1.305 0.046 0.006 N 29 3 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.539 1.496 0.043 0.006 N 30 3 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.540 1.496 0.044 0.006 N 31 3 C5 A DT 9 ? ? C7 A DT 9 ? ? 1.533 1.496 0.037 0.006 N 32 3 N7 A DG 10 ? ? C8 A DG 10 ? ? 1.351 1.305 0.046 0.006 N 33 3 N7 A DG 12 ? ? C8 A DG 12 ? ? 1.349 1.305 0.044 0.006 N 34 3 "C3'" B DC 13 ? ? "C2'" B DC 13 ? ? 1.599 1.518 0.081 0.012 N 35 3 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.353 1.305 0.048 0.006 N 36 3 N7 B A 16 ? ? C8 B A 16 ? ? 1.355 1.311 0.044 0.007 N 37 3 C5 B DT 19 ? ? C7 B DT 19 ? ? 1.537 1.496 0.041 0.006 N 38 3 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.540 1.496 0.044 0.006 N 39 3 C5 B DT 21 ? ? C7 B DT 21 ? ? 1.533 1.496 0.037 0.006 N 40 3 N7 B DG 22 ? ? C8 B DG 22 ? ? 1.351 1.305 0.046 0.006 N 41 3 N7 B DG 24 ? ? C8 B DG 24 ? ? 1.345 1.305 0.040 0.006 N 42 4 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 1.603 1.518 0.085 0.012 N 43 4 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.353 1.305 0.048 0.006 N 44 4 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.538 1.496 0.042 0.006 N 45 4 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.539 1.496 0.043 0.006 N 46 4 N7 A DG 10 ? ? C8 A DG 10 ? ? 1.352 1.305 0.047 0.006 N 47 4 N7 A DG 12 ? ? C8 A DG 12 ? ? 1.348 1.305 0.043 0.006 N 48 4 "C3'" B DC 13 ? ? "C2'" B DC 13 ? ? 1.598 1.518 0.080 0.012 N 49 4 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.351 1.305 0.046 0.006 N 50 4 C5 B DT 19 ? ? C7 B DT 19 ? ? 1.539 1.496 0.043 0.006 N 51 4 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.541 1.496 0.045 0.006 N 52 4 N7 B DG 22 ? ? C8 B DG 22 ? ? 1.351 1.305 0.046 0.006 N 53 4 N7 B DG 24 ? ? C8 B DG 24 ? ? 1.350 1.305 0.045 0.006 N 54 5 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.353 1.305 0.048 0.006 N 55 5 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.538 1.496 0.042 0.006 N 56 5 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.539 1.496 0.043 0.006 N 57 5 C5 A DT 9 ? ? C7 A DT 9 ? ? 1.534 1.496 0.038 0.006 N 58 5 N7 A DG 10 ? ? C8 A DG 10 ? ? 1.351 1.305 0.046 0.006 N 59 5 N7 A DG 12 ? ? C8 A DG 12 ? ? 1.351 1.305 0.046 0.006 N 60 5 "C3'" B DC 13 ? ? "C2'" B DC 13 ? ? 1.604 1.518 0.086 0.012 N 61 5 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.352 1.305 0.047 0.006 N 62 5 C5 B DT 19 ? ? C7 B DT 19 ? ? 1.539 1.496 0.043 0.006 N 63 5 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.540 1.496 0.044 0.006 N 64 5 C5 B DT 21 ? ? C7 B DT 21 ? ? 1.532 1.496 0.036 0.006 N 65 5 N7 B DG 22 ? ? C8 B DG 22 ? ? 1.352 1.305 0.047 0.006 N 66 5 N7 B DG 24 ? ? C8 B DG 24 ? ? 1.347 1.305 0.042 0.006 N 67 6 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 1.604 1.518 0.086 0.012 N 68 6 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.352 1.305 0.047 0.006 N 69 6 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.537 1.496 0.041 0.006 N 70 6 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.539 1.496 0.043 0.006 N 71 6 C5 A DT 9 ? ? C7 A DT 9 ? ? 1.534 1.496 0.038 0.006 N 72 6 N7 A DG 10 ? ? C8 A DG 10 ? ? 1.353 1.305 0.048 0.006 N 73 6 N7 A DG 12 ? ? C8 A DG 12 ? ? 1.347 1.305 0.042 0.006 N 74 6 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.353 1.305 0.048 0.006 N 75 6 C5 B DT 19 ? ? C7 B DT 19 ? ? 1.540 1.496 0.044 0.006 N 76 6 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.540 1.496 0.044 0.006 N 77 6 C5 B DT 21 ? ? C7 B DT 21 ? ? 1.533 1.496 0.037 0.006 N 78 6 N7 B DG 22 ? ? C8 B DG 22 ? ? 1.352 1.305 0.047 0.006 N 79 6 N7 B DG 24 ? ? C8 B DG 24 ? ? 1.348 1.305 0.043 0.006 N 80 7 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 1.606 1.518 0.088 0.012 N 81 7 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.353 1.305 0.048 0.006 N 82 7 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.537 1.496 0.041 0.006 N 83 7 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.539 1.496 0.043 0.006 N 84 7 C5 A DT 9 ? ? C7 A DT 9 ? ? 1.535 1.496 0.039 0.006 N 85 7 N7 A DG 10 ? ? C8 A DG 10 ? ? 1.353 1.305 0.048 0.006 N 86 7 N7 A DG 12 ? ? C8 A DG 12 ? ? 1.348 1.305 0.043 0.006 N 87 7 "C3'" B DC 13 ? ? "C2'" B DC 13 ? ? 1.605 1.518 0.087 0.012 N 88 7 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.354 1.305 0.049 0.006 N 89 7 C5 B DT 19 ? ? C7 B DT 19 ? ? 1.540 1.496 0.044 0.006 N 90 7 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.538 1.496 0.042 0.006 N 91 7 C5 B DT 21 ? ? C7 B DT 21 ? ? 1.533 1.496 0.037 0.006 N 92 7 N7 B DG 22 ? ? C8 B DG 22 ? ? 1.352 1.305 0.047 0.006 N 93 7 N7 B DG 24 ? ? C8 B DG 24 ? ? 1.348 1.305 0.043 0.006 N 94 8 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 1.604 1.518 0.086 0.012 N 95 8 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.351 1.305 0.046 0.006 N 96 8 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.538 1.496 0.042 0.006 N 97 8 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.542 1.496 0.046 0.006 N 98 8 C5 A DT 9 ? ? C7 A DT 9 ? ? 1.533 1.496 0.037 0.006 N 99 8 N7 A DG 10 ? ? C8 A DG 10 ? ? 1.352 1.305 0.047 0.006 N 100 8 N7 A DG 12 ? ? C8 A DG 12 ? ? 1.347 1.305 0.042 0.006 N 101 8 "C3'" B DC 13 ? ? "C2'" B DC 13 ? ? 1.603 1.518 0.085 0.012 N 102 8 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.354 1.305 0.049 0.006 N 103 8 C5 B DT 19 ? ? C7 B DT 19 ? ? 1.540 1.496 0.044 0.006 N 104 8 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.541 1.496 0.045 0.006 N 105 8 C5 B DT 21 ? ? C7 B DT 21 ? ? 1.535 1.496 0.039 0.006 N 106 8 N7 B DG 22 ? ? C8 B DG 22 ? ? 1.351 1.305 0.046 0.006 N 107 8 N7 B DG 24 ? ? C8 B DG 24 ? ? 1.347 1.305 0.042 0.006 N 108 9 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 1.603 1.518 0.085 0.012 N 109 9 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.352 1.305 0.047 0.006 N 110 9 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.537 1.496 0.041 0.006 N 111 9 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.540 1.496 0.044 0.006 N 112 9 N7 A DG 10 ? ? C8 A DG 10 ? ? 1.351 1.305 0.046 0.006 N 113 9 N7 A DG 12 ? ? C8 A DG 12 ? ? 1.351 1.305 0.046 0.006 N 114 9 "C3'" B DC 13 ? ? "C2'" B DC 13 ? ? 1.604 1.518 0.086 0.012 N 115 9 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.352 1.305 0.047 0.006 N 116 9 C5 B DT 19 ? ? C7 B DT 19 ? ? 1.538 1.496 0.042 0.006 N 117 9 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.540 1.496 0.044 0.006 N 118 9 N7 B DG 22 ? ? C8 B DG 22 ? ? 1.351 1.305 0.046 0.006 N 119 9 N7 B DG 24 ? ? C8 B DG 24 ? ? 1.350 1.305 0.045 0.006 N 120 10 "C3'" A DC 1 ? ? "C2'" A DC 1 ? ? 1.603 1.518 0.085 0.012 N 121 10 N7 A DG 2 ? ? C8 A DG 2 ? ? 1.353 1.305 0.048 0.006 N 122 10 C5 A DT 7 ? ? C7 A DT 7 ? ? 1.539 1.496 0.043 0.006 N 123 10 C5 A DT 8 ? ? C7 A DT 8 ? ? 1.541 1.496 0.045 0.006 N 124 10 C5 A DT 9 ? ? C7 A DT 9 ? ? 1.533 1.496 0.037 0.006 N 125 10 N7 A DG 10 ? ? C8 A DG 10 ? ? 1.351 1.305 0.046 0.006 N 126 10 N7 A DG 12 ? ? C8 A DG 12 ? ? 1.350 1.305 0.045 0.006 N 127 10 "C3'" B DC 13 ? ? "C2'" B DC 13 ? ? 1.604 1.518 0.086 0.012 N 128 10 N7 B DG 14 ? ? C8 B DG 14 ? ? 1.351 1.305 0.046 0.006 N 129 10 C5 B DT 19 ? ? C7 B DT 19 ? ? 1.539 1.496 0.043 0.006 N 130 10 C5 B DT 20 ? ? C7 B DT 20 ? ? 1.541 1.496 0.045 0.006 N 131 10 C5 B DT 21 ? ? C7 B DT 21 ? ? 1.534 1.496 0.038 0.006 N 132 10 N7 B DG 22 ? ? C8 B DG 22 ? ? 1.352 1.305 0.047 0.006 N 133 10 N7 B DG 24 ? ? C8 B DG 24 ? ? 1.350 1.305 0.045 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 112.37 108.30 4.07 0.30 N 2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 99.61 105.90 -6.29 0.80 N 3 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.97 108.30 3.67 0.30 N 4 1 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.11 118.90 4.21 0.60 N 5 1 "C1'" A A 4 ? ? "O4'" A A 4 ? ? "C4'" A A 4 ? ? 103.58 109.70 -6.12 0.70 N 6 1 "O4'" A A 4 ? ? "C1'" A A 4 ? ? N9 A A 4 ? ? 117.14 108.50 8.64 0.70 N 7 1 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 114.67 108.50 6.17 0.70 N 8 1 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.39 108.30 3.09 0.30 N 9 1 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.91 122.90 -3.99 0.60 N 10 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 98.80 105.90 -7.10 0.80 N 11 1 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.82 108.30 3.52 0.30 N 12 1 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? "C2'" A DG 12 ? ? 100.48 105.90 -5.42 0.80 N 13 1 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 113.72 108.30 5.42 0.30 N 14 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 100.05 105.90 -5.85 0.80 N 15 1 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 112.55 108.30 4.25 0.30 N 16 1 "C3'" B DG 14 ? ? "O3'" B DG 14 ? ? P B DC 15 ? ? 127.85 119.70 8.15 1.20 Y 17 1 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 123.03 118.90 4.13 0.60 N 18 1 "C1'" B A 16 ? ? "O4'" B A 16 ? ? "C4'" B A 16 ? ? 104.21 109.70 -5.49 0.70 N 19 1 "O4'" B A 16 ? ? "C1'" B A 16 ? ? N9 B A 16 ? ? 115.72 108.50 7.22 0.70 N 20 1 "O4'" B A 18 ? ? "C1'" B A 18 ? ? N9 B A 18 ? ? 114.69 108.50 6.19 0.70 N 21 1 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.31 108.30 3.01 0.30 N 22 1 C6 B DT 21 ? ? C5 B DT 21 ? ? C7 B DT 21 ? ? 119.06 122.90 -3.84 0.60 N 23 1 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 99.18 105.90 -6.72 0.80 N 24 1 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 111.37 108.30 3.07 0.30 N 25 1 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? N1 B DC 23 ? ? 111.70 108.30 3.40 0.30 N 26 1 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 111.86 108.30 3.56 0.30 N 27 2 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 113.31 108.30 5.01 0.30 N 28 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 99.72 105.90 -6.18 0.80 N 29 2 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 111.86 108.30 3.56 0.30 N 30 2 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DC 3 ? ? 128.14 119.70 8.44 1.20 Y 31 2 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 122.63 118.90 3.73 0.60 N 32 2 "C1'" A A 4 ? ? "O4'" A A 4 ? ? "C4'" A A 4 ? ? 103.55 109.70 -6.15 0.70 N 33 2 "O4'" A A 4 ? ? "C1'" A A 4 ? ? N9 A A 4 ? ? 117.34 108.50 8.84 0.70 N 34 2 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 114.74 108.50 6.24 0.70 N 35 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.26 108.30 2.96 0.30 N 36 2 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.96 122.90 -3.94 0.60 N 37 2 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 99.32 105.90 -6.58 0.80 N 38 2 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 110.86 108.30 2.56 0.30 N 39 2 N1 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 122.56 118.90 3.66 0.60 N 40 2 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 99.44 105.90 -6.46 0.80 N 41 2 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 112.14 108.30 3.84 0.30 N 42 2 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 123.02 118.90 4.12 0.60 N 43 2 "C1'" B A 16 ? ? "O4'" B A 16 ? ? "C4'" B A 16 ? ? 103.85 109.70 -5.85 0.70 N 44 2 "O4'" B A 16 ? ? "C1'" B A 16 ? ? N9 B A 16 ? ? 116.49 108.50 7.99 0.70 N 45 2 "O4'" B A 18 ? ? "C1'" B A 18 ? ? N9 B A 18 ? ? 114.41 108.50 5.91 0.70 N 46 2 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.15 108.30 2.85 0.30 N 47 2 C6 B DT 21 ? ? C5 B DT 21 ? ? C7 B DT 21 ? ? 119.01 122.90 -3.89 0.60 N 48 2 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 98.88 105.90 -7.02 0.80 N 49 2 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 111.24 108.30 2.94 0.30 N 50 2 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? N1 B DC 23 ? ? 111.22 108.30 2.92 0.30 N 51 2 "C3'" B DC 23 ? ? "O3'" B DC 23 ? ? P B DG 24 ? ? 127.57 119.70 7.87 1.20 Y 52 3 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 122.57 118.90 3.67 0.60 N 53 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 99.17 105.90 -6.73 0.80 N 54 3 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.69 108.30 4.39 0.30 N 55 3 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 122.99 118.90 4.09 0.60 N 56 3 "C1'" A A 4 ? ? "O4'" A A 4 ? ? "C4'" A A 4 ? ? 103.73 109.70 -5.97 0.70 N 57 3 "O4'" A A 4 ? ? "C1'" A A 4 ? ? N9 A A 4 ? ? 116.75 108.50 8.25 0.70 N 58 3 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 114.43 108.50 5.93 0.70 N 59 3 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.11 108.30 2.81 0.30 N 60 3 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.01 122.90 -3.89 0.60 N 61 3 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 98.97 105.90 -6.93 0.80 N 62 3 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.92 108.30 3.62 0.30 N 63 3 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.18 108.30 2.88 0.30 N 64 3 "C3'" A DC 11 ? ? "O3'" A DC 11 ? ? P A DG 12 ? ? 129.16 119.70 9.46 1.20 Y 65 3 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 111.66 108.30 3.36 0.30 N 66 3 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 99.50 105.90 -6.40 0.80 N 67 3 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 111.19 108.30 2.89 0.30 N 68 3 "C3'" B DG 14 ? ? "O3'" B DG 14 ? ? P B DC 15 ? ? 127.13 119.70 7.43 1.20 Y 69 3 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 122.79 118.90 3.89 0.60 N 70 3 "C1'" B A 16 ? ? "O4'" B A 16 ? ? "C4'" B A 16 ? ? 103.58 109.70 -6.12 0.70 N 71 3 "O4'" B A 16 ? ? "C1'" B A 16 ? ? N9 B A 16 ? ? 117.38 108.50 8.88 0.70 N 72 3 "O4'" B A 18 ? ? "C1'" B A 18 ? ? N9 B A 18 ? ? 114.65 108.50 6.15 0.70 N 73 3 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.29 108.30 2.99 0.30 N 74 3 C6 B DT 21 ? ? C5 B DT 21 ? ? C7 B DT 21 ? ? 119.07 122.90 -3.83 0.60 N 75 3 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 99.29 105.90 -6.61 0.80 N 76 3 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 111.81 108.30 3.51 0.30 N 77 4 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 99.86 105.90 -6.04 0.80 N 78 4 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.32 108.30 4.02 0.30 N 79 4 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DC 3 ? ? 127.27 119.70 7.57 1.20 Y 80 4 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.12 118.90 4.22 0.60 N 81 4 "C1'" A A 4 ? ? "O4'" A A 4 ? ? "C4'" A A 4 ? ? 103.83 109.70 -5.87 0.70 N 82 4 "O4'" A A 4 ? ? "C1'" A A 4 ? ? N9 A A 4 ? ? 116.73 108.50 8.23 0.70 N 83 4 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 114.72 108.50 6.22 0.70 N 84 4 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.12 108.30 2.82 0.30 N 85 4 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.12 122.90 -3.78 0.60 N 86 4 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 99.12 105.90 -6.78 0.80 N 87 4 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.50 108.30 3.20 0.30 N 88 4 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? N1 A DC 11 ? ? 111.53 108.30 3.23 0.30 N 89 4 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 111.10 108.30 2.80 0.30 N 90 4 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 113.00 108.30 4.70 0.30 N 91 4 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 100.02 105.90 -5.88 0.80 N 92 4 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 111.95 108.30 3.65 0.30 N 93 4 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 123.12 118.90 4.22 0.60 N 94 4 "C1'" B A 16 ? ? "O4'" B A 16 ? ? "C4'" B A 16 ? ? 103.69 109.70 -6.01 0.70 N 95 4 "O4'" B A 16 ? ? "C1'" B A 16 ? ? N9 B A 16 ? ? 116.79 108.50 8.29 0.70 N 96 4 "O4'" B A 18 ? ? "C1'" B A 18 ? ? N9 B A 18 ? ? 114.84 108.50 6.34 0.70 N 97 4 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.01 108.30 2.71 0.30 N 98 4 C6 B DT 21 ? ? C5 B DT 21 ? ? C7 B DT 21 ? ? 119.02 122.90 -3.88 0.60 N 99 4 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 99.15 105.90 -6.75 0.80 N 100 4 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 111.40 108.30 3.10 0.30 N 101 4 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? "C2'" B DG 24 ? ? 101.08 105.90 -4.82 0.80 N 102 4 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 114.70 108.30 6.40 0.30 N 103 5 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 122.62 118.90 3.72 0.60 N 104 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 98.95 105.90 -6.95 0.80 N 105 5 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.32 108.30 5.02 0.30 N 106 5 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.05 118.90 4.15 0.60 N 107 5 "C1'" A A 4 ? ? "O4'" A A 4 ? ? "C4'" A A 4 ? ? 103.78 109.70 -5.92 0.70 N 108 5 "O4'" A A 4 ? ? "C1'" A A 4 ? ? N9 A A 4 ? ? 117.05 108.50 8.55 0.70 N 109 5 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 114.59 108.50 6.09 0.70 N 110 5 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.99 108.30 2.69 0.30 N 111 5 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.03 122.90 -3.87 0.60 N 112 5 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 99.21 105.90 -6.69 0.80 N 113 5 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.83 108.30 3.53 0.30 N 114 5 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 100.87 105.90 -5.03 0.80 N 115 5 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 114.47 108.30 6.17 0.30 N 116 5 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 99.92 105.90 -5.98 0.80 N 117 5 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 112.45 108.30 4.15 0.30 N 118 5 "C3'" B DG 14 ? ? "O3'" B DG 14 ? ? P B DC 15 ? ? 127.46 119.70 7.76 1.20 Y 119 5 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 123.18 118.90 4.28 0.60 N 120 5 "C1'" B A 16 ? ? "O4'" B A 16 ? ? "C4'" B A 16 ? ? 103.71 109.70 -5.99 0.70 N 121 5 "O4'" B A 16 ? ? "C1'" B A 16 ? ? N9 B A 16 ? ? 116.76 108.50 8.26 0.70 N 122 5 "O4'" B A 18 ? ? "C1'" B A 18 ? ? N9 B A 18 ? ? 113.97 108.50 5.47 0.70 N 123 5 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.22 108.30 2.92 0.30 N 124 5 C6 B DT 21 ? ? C5 B DT 21 ? ? C7 B DT 21 ? ? 119.05 122.90 -3.85 0.60 N 125 5 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 99.21 105.90 -6.69 0.80 N 126 5 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.29 108.30 3.99 0.30 N 127 5 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? "C2'" B DC 23 ? ? 100.64 105.90 -5.26 0.80 N 128 5 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? N1 B DC 23 ? ? 110.45 108.30 2.15 0.30 N 129 5 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.51 118.90 3.61 0.60 N 130 5 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 110.92 108.30 2.62 0.30 N 131 6 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 122.61 118.90 3.71 0.60 N 132 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 99.50 105.90 -6.40 0.80 N 133 6 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.85 108.30 5.55 0.30 N 134 6 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DC 3 ? ? 127.30 119.70 7.60 1.20 Y 135 6 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 122.99 118.90 4.09 0.60 N 136 6 "C1'" A A 4 ? ? "O4'" A A 4 ? ? "C4'" A A 4 ? ? 103.67 109.70 -6.03 0.70 N 137 6 "O4'" A A 4 ? ? "C1'" A A 4 ? ? N9 A A 4 ? ? 117.38 108.50 8.88 0.70 N 138 6 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 114.38 108.50 5.88 0.70 N 139 6 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.28 108.30 2.98 0.30 N 140 6 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.91 122.90 -3.99 0.60 N 141 6 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 98.98 105.90 -6.92 0.80 N 142 6 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.52 108.30 4.22 0.30 N 143 6 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 100.57 105.90 -5.33 0.80 N 144 6 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.57 118.90 3.67 0.60 N 145 6 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? "C2'" A DG 12 ? ? 98.57 105.90 -7.33 0.80 N 146 6 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 113.33 108.30 5.03 0.30 N 147 6 N1 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 122.72 118.90 3.82 0.60 N 148 6 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 98.87 105.90 -7.03 0.80 N 149 6 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 113.78 108.30 5.48 0.30 N 150 6 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 122.92 118.90 4.02 0.60 N 151 6 "C1'" B A 16 ? ? "O4'" B A 16 ? ? "C4'" B A 16 ? ? 104.05 109.70 -5.65 0.70 N 152 6 "O4'" B A 16 ? ? "C1'" B A 16 ? ? N9 B A 16 ? ? 116.34 108.50 7.84 0.70 N 153 6 "O4'" B A 18 ? ? "C1'" B A 18 ? ? N9 B A 18 ? ? 114.46 108.50 5.96 0.70 N 154 6 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.13 108.30 2.83 0.30 N 155 6 C6 B DT 20 ? ? C5 B DT 20 ? ? C7 B DT 20 ? ? 119.26 122.90 -3.64 0.60 N 156 6 C6 B DT 21 ? ? C5 B DT 21 ? ? C7 B DT 21 ? ? 118.95 122.90 -3.95 0.60 N 157 6 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 99.06 105.90 -6.84 0.80 N 158 6 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 113.10 108.30 4.80 0.30 N 159 6 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? "C2'" B DC 23 ? ? 100.15 105.90 -5.75 0.80 N 160 6 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.73 118.90 3.83 0.60 N 161 6 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 113.02 108.30 4.72 0.30 N 162 7 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 122.65 118.90 3.75 0.60 N 163 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 99.51 105.90 -6.39 0.80 N 164 7 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 113.86 108.30 5.56 0.30 N 165 7 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.06 118.90 4.16 0.60 N 166 7 "C1'" A A 4 ? ? "O4'" A A 4 ? ? "C4'" A A 4 ? ? 103.40 109.70 -6.30 0.70 N 167 7 "O4'" A A 4 ? ? "C1'" A A 4 ? ? N9 A A 4 ? ? 117.23 108.50 8.73 0.70 N 168 7 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 114.39 108.50 5.89 0.70 N 169 7 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.33 108.30 3.03 0.30 N 170 7 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.88 122.90 -4.02 0.60 N 171 7 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 99.27 105.90 -6.63 0.80 N 172 7 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.61 108.30 4.31 0.30 N 173 7 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 100.68 105.90 -5.22 0.80 N 174 7 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? "C2'" A DG 12 ? ? 98.83 105.90 -7.07 0.80 N 175 7 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 114.08 108.30 5.78 0.30 N 176 7 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 110.99 108.30 2.69 0.30 N 177 7 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 99.72 105.90 -6.18 0.80 N 178 7 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 113.54 108.30 5.24 0.30 N 179 7 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 122.88 118.90 3.98 0.60 N 180 7 "C1'" B A 16 ? ? "O4'" B A 16 ? ? "C4'" B A 16 ? ? 103.88 109.70 -5.82 0.70 N 181 7 "O4'" B A 16 ? ? "C1'" B A 16 ? ? N9 B A 16 ? ? 116.43 108.50 7.93 0.70 N 182 7 "O4'" B A 18 ? ? "C1'" B A 18 ? ? N9 B A 18 ? ? 114.40 108.50 5.90 0.70 N 183 7 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 110.94 108.30 2.64 0.30 N 184 7 C6 B DT 21 ? ? C5 B DT 21 ? ? C7 B DT 21 ? ? 118.98 122.90 -3.92 0.60 N 185 7 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 99.05 105.90 -6.85 0.80 N 186 7 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 112.62 108.30 4.32 0.30 N 187 7 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? "C2'" B DC 23 ? ? 100.30 105.90 -5.60 0.80 N 188 7 N1 B DC 23 ? ? C2 B DC 23 ? ? O2 B DC 23 ? ? 122.60 118.90 3.70 0.60 N 189 7 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 113.69 108.30 5.39 0.30 N 190 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 99.62 105.90 -6.28 0.80 N 191 8 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.26 108.30 3.96 0.30 N 192 8 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DC 3 ? ? 126.96 119.70 7.26 1.20 Y 193 8 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.00 118.90 4.10 0.60 N 194 8 "C1'" A A 4 ? ? "O4'" A A 4 ? ? "C4'" A A 4 ? ? 103.79 109.70 -5.91 0.70 N 195 8 "O4'" A A 4 ? ? "C1'" A A 4 ? ? N9 A A 4 ? ? 116.73 108.50 8.23 0.70 N 196 8 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 114.74 108.50 6.24 0.70 N 197 8 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.50 108.30 3.20 0.30 N 198 8 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.08 122.90 -3.82 0.60 N 199 8 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 99.37 105.90 -6.53 0.80 N 200 8 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 112.00 108.30 3.70 0.30 N 201 8 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 100.68 105.90 -5.22 0.80 N 202 8 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? "C2'" A DG 12 ? ? 99.30 105.90 -6.60 0.80 N 203 8 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 112.44 108.30 4.14 0.30 N 204 8 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 99.23 105.90 -6.67 0.80 N 205 8 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 113.01 108.30 4.71 0.30 N 206 8 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 122.95 118.90 4.05 0.60 N 207 8 "C1'" B A 16 ? ? "O4'" B A 16 ? ? "C4'" B A 16 ? ? 104.09 109.70 -5.61 0.70 N 208 8 "O4'" B A 16 ? ? "C1'" B A 16 ? ? N9 B A 16 ? ? 116.43 108.50 7.93 0.70 N 209 8 "O4'" B A 18 ? ? "C1'" B A 18 ? ? N9 B A 18 ? ? 114.64 108.50 6.14 0.70 N 210 8 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.63 108.30 3.33 0.30 N 211 8 C6 B DT 21 ? ? C5 B DT 21 ? ? C7 B DT 21 ? ? 119.06 122.90 -3.84 0.60 N 212 8 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 99.11 105.90 -6.79 0.80 N 213 8 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 111.65 108.30 3.35 0.30 N 214 9 N1 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 122.51 118.90 3.61 0.60 N 215 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 99.78 105.90 -6.12 0.80 N 216 9 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.47 108.30 4.17 0.30 N 217 9 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 123.05 118.90 4.15 0.60 N 218 9 "C1'" A A 4 ? ? "O4'" A A 4 ? ? "C4'" A A 4 ? ? 103.94 109.70 -5.76 0.70 N 219 9 "O4'" A A 4 ? ? "C1'" A A 4 ? ? N9 A A 4 ? ? 116.59 108.50 8.09 0.70 N 220 9 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 114.85 108.50 6.35 0.70 N 221 9 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.12 108.30 2.82 0.30 N 222 9 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 118.98 122.90 -3.92 0.60 N 223 9 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 99.28 105.90 -6.62 0.80 N 224 9 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.25 108.30 2.95 0.30 N 225 9 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? "C2'" A DG 12 ? ? 98.87 105.90 -7.03 0.80 N 226 9 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 115.67 108.30 7.37 0.30 N 227 9 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 99.83 105.90 -6.07 0.80 N 228 9 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 112.59 108.30 4.29 0.30 N 229 9 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 123.06 118.90 4.16 0.60 N 230 9 "C1'" B A 16 ? ? "O4'" B A 16 ? ? "C4'" B A 16 ? ? 103.94 109.70 -5.76 0.70 N 231 9 "O4'" B A 16 ? ? "C1'" B A 16 ? ? N9 B A 16 ? ? 116.60 108.50 8.10 0.70 N 232 9 "O4'" B A 18 ? ? "C1'" B A 18 ? ? N9 B A 18 ? ? 114.92 108.50 6.42 0.70 N 233 9 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.21 108.30 2.91 0.30 N 234 9 C6 B DT 21 ? ? C5 B DT 21 ? ? C7 B DT 21 ? ? 118.99 122.90 -3.91 0.60 N 235 9 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 99.27 105.90 -6.63 0.80 N 236 9 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 111.30 108.30 3.00 0.30 N 237 9 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 114.63 108.30 6.33 0.30 N 238 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 99.96 105.90 -5.94 0.80 N 239 10 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? N9 A DG 2 ? ? 112.28 108.30 3.98 0.30 N 240 10 N1 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 122.94 118.90 4.04 0.60 N 241 10 "C1'" A A 4 ? ? "O4'" A A 4 ? ? "C4'" A A 4 ? ? 104.06 109.70 -5.64 0.70 N 242 10 "O4'" A A 4 ? ? "C1'" A A 4 ? ? N9 A A 4 ? ? 116.30 108.50 7.80 0.70 N 243 10 "O4'" A A 6 ? ? "C1'" A A 6 ? ? N9 A A 6 ? ? 114.77 108.50 6.27 0.70 N 244 10 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.10 108.30 2.80 0.30 N 245 10 C6 A DT 9 ? ? C5 A DT 9 ? ? C7 A DT 9 ? ? 119.22 122.90 -3.68 0.60 N 246 10 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? "C2'" A DG 10 ? ? 99.22 105.90 -6.68 0.80 N 247 10 "O4'" A DG 10 ? ? "C1'" A DG 10 ? ? N9 A DG 10 ? ? 111.38 108.30 3.08 0.30 N 248 10 "O4'" A DC 11 ? ? "C1'" A DC 11 ? ? "C2'" A DC 11 ? ? 101.03 105.90 -4.87 0.80 N 249 10 N1 A DC 11 ? ? C2 A DC 11 ? ? O2 A DC 11 ? ? 122.60 118.90 3.70 0.60 N 250 10 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? "C2'" A DG 12 ? ? 98.22 105.90 -7.68 0.80 N 251 10 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 117.03 108.30 8.73 0.30 N 252 10 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 110.21 108.30 1.91 0.30 N 253 10 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? "C2'" B DG 14 ? ? 99.61 105.90 -6.29 0.80 N 254 10 "O4'" B DG 14 ? ? "C1'" B DG 14 ? ? N9 B DG 14 ? ? 112.35 108.30 4.05 0.30 N 255 10 N1 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 123.01 118.90 4.11 0.60 N 256 10 "C1'" B A 16 ? ? "O4'" B A 16 ? ? "C4'" B A 16 ? ? 104.18 109.70 -5.52 0.70 N 257 10 "O4'" B A 16 ? ? "C1'" B A 16 ? ? N9 B A 16 ? ? 116.28 108.50 7.78 0.70 N 258 10 "O4'" B A 18 ? ? "C1'" B A 18 ? ? N9 B A 18 ? ? 114.73 108.50 6.23 0.70 N 259 10 "O4'" B DT 19 ? ? "C1'" B DT 19 ? ? N1 B DT 19 ? ? 111.27 108.30 2.97 0.30 N 260 10 C6 B DT 21 ? ? C5 B DT 21 ? ? C7 B DT 21 ? ? 119.30 122.90 -3.60 0.60 N 261 10 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? "C2'" B DG 22 ? ? 99.27 105.90 -6.63 0.80 N 262 10 "O4'" B DG 22 ? ? "C1'" B DG 22 ? ? N9 B DG 22 ? ? 111.45 108.30 3.15 0.30 N 263 10 "O4'" B DC 23 ? ? "C1'" B DC 23 ? ? "C2'" B DC 23 ? ? 100.97 105.90 -4.93 0.80 N 264 10 "O4'" B DG 24 ? ? "C1'" B DG 24 ? ? N9 B DG 24 ? ? 115.03 108.30 6.73 0.30 N # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1DXN 'double helix' 1DXN 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 12 1_555 0.639 -0.383 -0.377 15.758 -14.150 -0.681 1 A_DC1:DG24_B A 1 ? B 24 ? 19 1 1 A DG 2 1_555 B DC 11 1_555 -0.653 -0.363 -0.286 -8.975 -5.476 0.300 2 A_DG2:DC23_B A 2 ? B 23 ? 19 1 1 A DC 3 1_555 B DG 10 1_555 0.519 -0.260 0.187 -2.482 -1.194 -1.828 3 A_DC3:DG22_B A 3 ? B 22 ? 19 1 1 A A 4 1_555 B DT 9 1_555 0.220 -0.202 -0.006 -3.240 -13.875 -0.771 4 A_A4:DT21_B A 4 ? B 21 ? 20 1 1 A A 5 1_555 B DT 8 1_555 0.211 -0.241 -0.025 5.169 -33.497 -5.747 5 A_A5:DT20_B A 5 ? B 20 ? 20 1 1 A A 6 1_555 B DT 7 1_555 0.225 -0.205 -0.175 -4.140 -30.963 -7.240 6 A_A6:DT19_B A 6 ? B 19 ? 20 1 1 A DT 7 1_555 B A 6 1_555 -0.194 -0.200 -0.158 2.336 -30.316 -7.654 7 A_DT7:A18_B A 7 ? B 18 ? 20 1 1 A DT 8 1_555 B A 5 1_555 -0.204 -0.233 -0.038 -6.655 -31.945 -6.402 8 A_DT8:A17_B A 8 ? B 17 ? 20 1 1 A DT 9 1_555 B A 4 1_555 -0.179 -0.198 0.027 3.056 -13.937 1.999 9 A_DT9:A16_B A 9 ? B 16 ? 20 1 1 A DG 10 1_555 B DC 3 1_555 -0.481 -0.283 0.172 -1.688 -8.636 -3.016 10 A_DG10:DC15_B A 10 ? B 15 ? 19 1 1 A DC 11 1_555 B DG 2 1_555 0.478 -0.326 0.068 -1.476 -6.816 -0.365 11 A_DC11:DG14_B A 11 ? B 14 ? 19 1 1 A DG 12 1_555 B DC 1 1_555 -0.413 -0.329 0.006 4.637 -11.186 -1.107 12 A_DG12:DC13_B A 12 ? B 13 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 12 1_555 A DG 2 1_555 B DC 11 1_555 0.743 -2.241 3.647 0.589 12.702 28.059 -6.653 -1.289 2.442 24.658 -1.144 30.753 1 AA_DC1DG2:DC23DG24_BB A 1 ? B 24 ? A 2 ? B 23 ? 1 A DG 2 1_555 B DC 11 1_555 A DC 3 1_555 B DG 10 1_555 -1.151 -0.835 2.906 -6.555 6.455 37.586 -1.975 1.015 2.882 9.838 9.992 38.656 2 AA_DG2DC3:DG22DC23_BB A 2 ? B 23 ? A 3 ? B 22 ? 1 A DC 3 1_555 B DG 10 1_555 A A 4 1_555 B DT 9 1_555 0.235 -1.422 3.014 1.169 4.233 24.020 -4.534 -0.232 2.734 10.064 -2.780 24.412 3 AA_DC3A4:DT21DG22_BB A 3 ? B 22 ? A 4 ? B 21 ? 1 A A 4 1_555 B DT 9 1_555 A A 5 1_555 B DT 8 1_555 -1.116 0.230 2.961 0.885 -4.845 39.841 0.830 1.716 2.890 -7.077 -1.292 40.132 4 AA_A4A5:DT20DT21_BB A 4 ? B 21 ? A 5 ? B 20 ? 1 A A 5 1_555 B DT 8 1_555 A A 6 1_555 B DT 7 1_555 0.641 -1.091 3.461 1.227 1.661 34.159 -2.130 -0.886 3.426 2.824 -2.086 34.220 5 AA_A5A6:DT19DT20_BB A 5 ? B 20 ? A 6 ? B 19 ? 1 A A 6 1_555 B DT 7 1_555 A DT 7 1_555 B A 6 1_555 -0.017 -1.236 2.678 -0.093 -2.978 36.287 -1.633 0.017 2.768 -4.772 0.149 36.405 6 AA_A6DT7:A18DT19_BB A 6 ? B 19 ? A 7 ? B 18 ? 1 A DT 7 1_555 B A 6 1_555 A DT 8 1_555 B A 5 1_555 -0.719 -1.176 3.427 -1.111 2.541 33.231 -2.487 1.062 3.352 4.434 1.939 33.343 7 AA_DT7DT8:A17A18_BB A 7 ? B 18 ? A 8 ? B 17 ? 1 A DT 8 1_555 B A 5 1_555 A DT 9 1_555 B A 4 1_555 1.313 0.323 2.906 -0.619 -3.103 38.935 0.812 -2.029 2.852 -4.645 0.927 39.058 8 AA_DT8DT9:A16A17_BB A 8 ? B 17 ? A 9 ? B 16 ? 1 A DT 9 1_555 B A 4 1_555 A DG 10 1_555 B DC 3 1_555 -0.369 -1.445 3.096 -0.094 4.627 25.281 -4.433 0.806 2.793 10.460 0.213 25.694 9 AA_DT9DG10:DC15A16_BB A 9 ? B 16 ? A 10 ? B 15 ? 1 A DG 10 1_555 B DC 3 1_555 A DC 11 1_555 B DG 2 1_555 0.677 -0.993 3.044 4.417 6.811 40.683 -2.070 -0.525 2.903 9.681 -6.278 41.451 10 AA_DG10DC11:DG14DC15_BB A 10 ? B 15 ? A 11 ? B 14 ? 1 A DC 11 1_555 B DG 2 1_555 A DG 12 1_555 B DC 1 1_555 -0.134 -0.821 2.757 1.098 19.605 19.652 -5.251 0.478 1.384 45.327 -2.538 27.712 11 AA_DC11DG12:DC13DG14_BB A 11 ? B 14 ? A 12 ? B 13 ? #