data_1DZO # _entry.id 1DZO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.308 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1DZO PDBE EBI-4703 WWPDB D_1290004703 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1PAJ unspecified . PDB 1PAK unspecified . PDB 1NIL unspecified . PDB 1NIM unspecified . # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1DZO _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2000-03-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hazes, B.' 1 'Read, R.J.' 2 # _citation.id primary _citation.title 'Crystal Structure of Pseudomonas Aeruginosa Pak Pilin Suggests a Main-Chain-Dominated Mode of Receptor Binding' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 299 _citation.page_first 1005 _citation.page_last ? _citation.year 2000 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10843854 _citation.pdbx_database_id_DOI 10.1006/JMBI.2000.3801 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hazes, B.' 1 ? primary 'Sastry, P.A.' 2 ? primary 'Hayakawa, K.' 3 ? primary 'Read, R.J.' 4 ? primary 'Irvin, R.T.' 5 ? # _cell.entry_id 1DZO _cell.length_a 38.114 _cell.length_b 38.114 _cell.length_c 149.775 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1DZO _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TYPE IV PILIN' 12696.225 1 ? YES 'GLOBULAR DOMAIN' ? 2 water nat water 18.015 131 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ALEGTEFARSEGASALASVNPLKTTVEEALSRGWSVKSGTGTEDATKKEVPLGVAADANKLGTIALKPDPADGTADITLT FTMGGAGPKNKGKIITLTRTAADGLWKCTSDQDEQFIPKGCSR ; _entity_poly.pdbx_seq_one_letter_code_can ;ALEGTEFARSEGASALASVNPLKTTVEEALSRGWSVKSGTGTEDATKKEVPLGVAADANKLGTIALKPDPADGTADITLT FTMGGAGPKNKGKIITLTRTAADGLWKCTSDQDEQFIPKGCSR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LEU n 1 3 GLU n 1 4 GLY n 1 5 THR n 1 6 GLU n 1 7 PHE n 1 8 ALA n 1 9 ARG n 1 10 SER n 1 11 GLU n 1 12 GLY n 1 13 ALA n 1 14 SER n 1 15 ALA n 1 16 LEU n 1 17 ALA n 1 18 SER n 1 19 VAL n 1 20 ASN n 1 21 PRO n 1 22 LEU n 1 23 LYS n 1 24 THR n 1 25 THR n 1 26 VAL n 1 27 GLU n 1 28 GLU n 1 29 ALA n 1 30 LEU n 1 31 SER n 1 32 ARG n 1 33 GLY n 1 34 TRP n 1 35 SER n 1 36 VAL n 1 37 LYS n 1 38 SER n 1 39 GLY n 1 40 THR n 1 41 GLY n 1 42 THR n 1 43 GLU n 1 44 ASP n 1 45 ALA n 1 46 THR n 1 47 LYS n 1 48 LYS n 1 49 GLU n 1 50 VAL n 1 51 PRO n 1 52 LEU n 1 53 GLY n 1 54 VAL n 1 55 ALA n 1 56 ALA n 1 57 ASP n 1 58 ALA n 1 59 ASN n 1 60 LYS n 1 61 LEU n 1 62 GLY n 1 63 THR n 1 64 ILE n 1 65 ALA n 1 66 LEU n 1 67 LYS n 1 68 PRO n 1 69 ASP n 1 70 PRO n 1 71 ALA n 1 72 ASP n 1 73 GLY n 1 74 THR n 1 75 ALA n 1 76 ASP n 1 77 ILE n 1 78 THR n 1 79 LEU n 1 80 THR n 1 81 PHE n 1 82 THR n 1 83 MET n 1 84 GLY n 1 85 GLY n 1 86 ALA n 1 87 GLY n 1 88 PRO n 1 89 LYS n 1 90 ASN n 1 91 LYS n 1 92 GLY n 1 93 LYS n 1 94 ILE n 1 95 ILE n 1 96 THR n 1 97 LEU n 1 98 THR n 1 99 ARG n 1 100 THR n 1 101 ALA n 1 102 ALA n 1 103 ASP n 1 104 GLY n 1 105 LEU n 1 106 TRP n 1 107 LYS n 1 108 CYS n 1 109 THR n 1 110 SER n 1 111 ASP n 1 112 GLN n 1 113 ASP n 1 114 GLU n 1 115 GLN n 1 116 PHE n 1 117 ILE n 1 118 PRO n 1 119 LYS n 1 120 GLY n 1 121 CYS n 1 122 SER n 1 123 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PILA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PSEUDOMONAS AERUGINOSA PAK' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1009714 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location 'EXTRACELLULAR FILAMENTOUS APPENDAGE' _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location 'PERIPLASMIC SPACE' _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PRLD _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'RESIDUES 22-28 ARE FROM THE EXPRESSION VECTOR. RESIDUES 29-144 ARE FROM THE MATURE PROTEIN.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 1DZO 1 ? ? 1DZO ? 2 UNP FMPA_PSEAE 1 ? ? P02973 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1DZO A 1 ? 7 ? 1DZO 22 ? 28 ? 22 28 2 2 1DZO A 8 ? 123 ? P02973 35 ? 150 ? 29 144 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1DZO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 43 _exptl_crystal.description 'DERIVATIVE DATA WERE SCALED USING THE NATIVE DATA AS A REFERENCE' _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.20 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;HANGING DROP USING 1 ML OF RESERVOIR DROPS MADE FROM 3 MICROLITRE PROTEIN AND 3 MICROLITRE OF MOTHER LIQUOR PROTEIN SOLUTION = 10 MG/ML IN WATER MOTHER LIQUOR = 60% (NH4)2SO4, 0.1M HEPES PH 8.2 ; # _diffrn.id 1 _diffrn.ambient_temp 293.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2000-12-15 _diffrn_detector.details 'SUPPER MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'ELLIOTT GX-13' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1DZO _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 37.440 _reflns.d_resolution_high 1.633 _reflns.number_obs 253714 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.04900 _reflns.pdbx_netI_over_sigmaI 26.7000 _reflns.B_iso_Wilson_estimate 16.8 _reflns.pdbx_redundancy 7.600 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.63 _reflns_shell.d_res_low 1.72 _reflns_shell.percent_possible_all 96.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.19000 _reflns_shell.meanI_over_sigI_obs 10.100 _reflns_shell.pdbx_redundancy 6.60 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1DZO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 14500 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.44 _refine.ls_d_res_high 1.63 _refine.ls_percent_reflns_obs 99.5 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.153 _refine.ls_R_factor_R_free 0.181 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 750 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 16.3 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'CNS EXPLICIT BULK SOLVENT CORRECTION WAS USED. B-SPHERE RMS = 1.851 FOR FREE ATOMS AND 2.429 FOR BONDED ATOMS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.12 _refine.pdbx_overall_ESU_R_Free 0.08 _refine.overall_SU_ML 0.04 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.26 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 846 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 131 _refine_hist.number_atoms_total 977 _refine_hist.d_res_high 1.63 _refine_hist.d_res_low 37.44 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.012 0.020 ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.023 0.040 ? ? 'X-RAY DIFFRACTION' ? p_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? p_planar_d 0.028 0.050 ? ? 'X-RAY DIFFRACTION' ? p_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? p_mcbond_it 2.632 99.000 ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 3.488 99.000 ? ? 'X-RAY DIFFRACTION' ? p_scbond_it 4.381 99.000 ? ? 'X-RAY DIFFRACTION' ? p_scangle_it 6.164 99.000 ? ? 'X-RAY DIFFRACTION' ? p_plane_restr 0.0164 0.03 ? ? 'X-RAY DIFFRACTION' ? p_chiral_restr 0.134 0.150 ? ? 'X-RAY DIFFRACTION' ? p_singtor_nbd 0.176 1.000 ? ? 'X-RAY DIFFRACTION' ? p_multtor_nbd 0.264 1.000 ? ? 'X-RAY DIFFRACTION' ? p_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? p_xyhbond_nbd 0.088 1.000 ? ? 'X-RAY DIFFRACTION' ? p_planar_tor 2.7 3.0 ? ? 'X-RAY DIFFRACTION' ? p_staggered_tor 10.5 15.0 ? ? 'X-RAY DIFFRACTION' ? p_orthonormal_tor ? ? ? ? 'X-RAY DIFFRACTION' ? p_transverse_tor 30.9 20.0 ? ? 'X-RAY DIFFRACTION' ? p_special_tor ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1DZO _struct.title 'Truncated PAK pilin from Pseudomonas aeruginosa' _struct.pdbx_descriptor 'TYPE IV PILIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1DZO _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'LECTIN, ADHESIN, CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ;ON CELLS PILIN IS FOUND AS LONG THIN FIBERS WHICH MEDIATE CELL ATTACHMENT. BASED ON MOLECULAR MODELING A PRELIMINARY FIBER MODEL HAS BEEN PROPOSED FOR THE RELATED TYPE IV PILIN OF NEISSERIA GONORRHOEAE(PDB ID CODE 1AY2). TO GENERATE THE CORRESPONDING MODEL FOR PAK PILIN THE COORDINATES IN THIS ENTRY SHOULD BE SUPERIMPOSED ON THE NEISSERIA MODEL FOLLOWED BY THE APPLICATION OF THE TRANSFORMATIONS AS INDICATED IN PDB ENTRY 1AY2.PDB ALTHOUGH THE NEISSERIA MODEL IS THE BEST CURRENT MODEL FOR THE FIBER STRUCTURE, IT SHOULD BE KEPT IN MIND THAT SIGNIFICANT DEVIATIONS FROM REALITY MAY EXIST. IN PARTICULAR, IT MAY BE POSSIBLE TO CREATE A SIMILAR MODEL BY STACKING PERFECT PENTAMERS OF PILIN MOLECULES. THE TYPE IV PILUS IS POLAR AND IT APPEARS TO EXPOSE EXTREMELY HYDROPHOBIC ALPHA HELICES AT ONE OF ITS ENDS. BASED ON RECEPTOR BINDING CONSIDERATIONS WE HAVE PROPOSED THAT THE HYDROPHOBIC ALPHA HELICES ARE DISPLAYED AT THE TIP OF THE PILUS AND THEREFORE INTERACT WITH HOST CELLS. THIS CONTRASTS WITH EARLIER MODELS WHERE THE HELICES WERE ASSUMED TO BE BURIED IN THE BACTERIAL OUTER MEMBRANE. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 7 ? ASN A 20 ? PHE A 28 ASN A 41 1 ? 14 HELX_P HELX_P2 2 PRO A 21 ? ARG A 32 ? PRO A 42 ARG A 53 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 108 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 121 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 129 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 142 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.025 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 67 A . ? LYS 88 A PRO 68 A ? PRO 89 A 1 -5.73 2 ASP 69 A . ? ASP 90 A PRO 70 A ? PRO 91 A 1 1.71 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 35 ? LYS A 37 ? SER A 56 LYS A 58 A 2 GLU A 49 ? PRO A 51 ? GLU A 70 PRO A 72 B 1 THR A 63 ? LYS A 67 ? THR A 84 LYS A 88 B 2 ILE A 77 ? THR A 82 ? ILE A 98 THR A 103 B 3 ILE A 94 ? THR A 100 ? ILE A 115 THR A 121 B 4 LEU A 105 ? SER A 110 ? LEU A 126 SER A 131 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 35 ? O SER A 56 N VAL A 50 ? N VAL A 71 B 1 2 O THR A 63 ? O THR A 84 N THR A 82 ? N THR A 103 B 2 3 O ILE A 77 ? O ILE A 98 N ARG A 99 ? N ARG A 120 B 3 4 O THR A 96 ? O THR A 117 N THR A 109 ? N THR A 130 # _database_PDB_matrix.entry_id 1DZO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1DZO _atom_sites.fract_transf_matrix[1][1] 0.026237 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026237 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006677 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 22 ? ? ? A . n A 1 2 LEU 2 23 ? ? ? A . n A 1 3 GLU 3 24 ? ? ? A . n A 1 4 GLY 4 25 25 GLY GLY A . n A 1 5 THR 5 26 26 THR THR A . n A 1 6 GLU 6 27 27 GLU GLU A . n A 1 7 PHE 7 28 28 PHE PHE A . n A 1 8 ALA 8 29 29 ALA ALA A . n A 1 9 ARG 9 30 30 ARG ARG A . n A 1 10 SER 10 31 31 SER SER A . n A 1 11 GLU 11 32 32 GLU GLU A . n A 1 12 GLY 12 33 33 GLY GLY A . n A 1 13 ALA 13 34 34 ALA ALA A . n A 1 14 SER 14 35 35 SER SER A . n A 1 15 ALA 15 36 36 ALA ALA A . n A 1 16 LEU 16 37 37 LEU LEU A . n A 1 17 ALA 17 38 38 ALA ALA A . n A 1 18 SER 18 39 39 SER SER A . n A 1 19 VAL 19 40 40 VAL VAL A . n A 1 20 ASN 20 41 41 ASN ASN A . n A 1 21 PRO 21 42 42 PRO PRO A . n A 1 22 LEU 22 43 43 LEU LEU A . n A 1 23 LYS 23 44 44 LYS LYS A . n A 1 24 THR 24 45 45 THR THR A . n A 1 25 THR 25 46 46 THR THR A . n A 1 26 VAL 26 47 47 VAL VAL A . n A 1 27 GLU 27 48 48 GLU GLU A . n A 1 28 GLU 28 49 49 GLU GLU A . n A 1 29 ALA 29 50 50 ALA ALA A . n A 1 30 LEU 30 51 51 LEU LEU A . n A 1 31 SER 31 52 52 SER SER A . n A 1 32 ARG 32 53 53 ARG ARG A . n A 1 33 GLY 33 54 54 GLY GLY A . n A 1 34 TRP 34 55 55 TRP TRP A . n A 1 35 SER 35 56 56 SER SER A . n A 1 36 VAL 36 57 57 VAL VAL A . n A 1 37 LYS 37 58 58 LYS LYS A . n A 1 38 SER 38 59 59 SER SER A . n A 1 39 GLY 39 60 60 GLY GLY A . n A 1 40 THR 40 61 61 THR THR A . n A 1 41 GLY 41 62 62 GLY GLY A . n A 1 42 THR 42 63 63 THR THR A . n A 1 43 GLU 43 64 64 GLU GLU A . n A 1 44 ASP 44 65 65 ASP ASP A . n A 1 45 ALA 45 66 66 ALA ALA A . n A 1 46 THR 46 67 67 THR THR A . n A 1 47 LYS 47 68 68 LYS LYS A . n A 1 48 LYS 48 69 69 LYS LYS A . n A 1 49 GLU 49 70 70 GLU GLU A . n A 1 50 VAL 50 71 71 VAL VAL A . n A 1 51 PRO 51 72 72 PRO PRO A . n A 1 52 LEU 52 73 73 LEU LEU A . n A 1 53 GLY 53 74 74 GLY GLY A . n A 1 54 VAL 54 75 75 VAL VAL A . n A 1 55 ALA 55 76 76 ALA ALA A . n A 1 56 ALA 56 77 77 ALA ALA A . n A 1 57 ASP 57 78 78 ASP ASP A . n A 1 58 ALA 58 79 79 ALA ALA A . n A 1 59 ASN 59 80 80 ASN ASN A . n A 1 60 LYS 60 81 81 LYS LYS A . n A 1 61 LEU 61 82 82 LEU LEU A . n A 1 62 GLY 62 83 83 GLY GLY A . n A 1 63 THR 63 84 84 THR THR A . n A 1 64 ILE 64 85 85 ILE ILE A . n A 1 65 ALA 65 86 86 ALA ALA A . n A 1 66 LEU 66 87 87 LEU LEU A . n A 1 67 LYS 67 88 88 LYS LYS A . n A 1 68 PRO 68 89 89 PRO PRO A . n A 1 69 ASP 69 90 90 ASP ASP A . n A 1 70 PRO 70 91 91 PRO PRO A . n A 1 71 ALA 71 92 92 ALA ALA A . n A 1 72 ASP 72 93 93 ASP ASP A . n A 1 73 GLY 73 94 94 GLY GLY A . n A 1 74 THR 74 95 95 THR THR A . n A 1 75 ALA 75 96 96 ALA ALA A . n A 1 76 ASP 76 97 97 ASP ASP A . n A 1 77 ILE 77 98 98 ILE ILE A . n A 1 78 THR 78 99 99 THR THR A . n A 1 79 LEU 79 100 100 LEU LEU A . n A 1 80 THR 80 101 101 THR THR A . n A 1 81 PHE 81 102 102 PHE PHE A . n A 1 82 THR 82 103 103 THR THR A . n A 1 83 MET 83 104 104 MET MET A . n A 1 84 GLY 84 105 105 GLY GLY A . n A 1 85 GLY 85 106 106 GLY GLY A . n A 1 86 ALA 86 107 107 ALA ALA A . n A 1 87 GLY 87 108 108 GLY GLY A . n A 1 88 PRO 88 109 109 PRO PRO A . n A 1 89 LYS 89 110 110 LYS LYS A . n A 1 90 ASN 90 111 111 ASN ASN A . n A 1 91 LYS 91 112 112 LYS LYS A . n A 1 92 GLY 92 113 113 GLY GLY A . n A 1 93 LYS 93 114 114 LYS LYS A . n A 1 94 ILE 94 115 115 ILE ILE A . n A 1 95 ILE 95 116 116 ILE ILE A . n A 1 96 THR 96 117 117 THR THR A . n A 1 97 LEU 97 118 118 LEU LEU A . n A 1 98 THR 98 119 119 THR THR A . n A 1 99 ARG 99 120 120 ARG ARG A . n A 1 100 THR 100 121 121 THR THR A . n A 1 101 ALA 101 122 122 ALA ALA A . n A 1 102 ALA 102 123 123 ALA ALA A . n A 1 103 ASP 103 124 124 ASP ASP A . n A 1 104 GLY 104 125 125 GLY GLY A . n A 1 105 LEU 105 126 126 LEU LEU A . n A 1 106 TRP 106 127 127 TRP TRP A . n A 1 107 LYS 107 128 128 LYS LYS A . n A 1 108 CYS 108 129 129 CYS CYS A . n A 1 109 THR 109 130 130 THR THR A . n A 1 110 SER 110 131 131 SER SER A . n A 1 111 ASP 111 132 132 ASP ASP A . n A 1 112 GLN 112 133 133 GLN GLN A . n A 1 113 ASP 113 134 134 ASP ASP A . n A 1 114 GLU 114 135 135 GLU GLU A . n A 1 115 GLN 115 136 136 GLN GLN A . n A 1 116 PHE 116 137 137 PHE PHE A . n A 1 117 ILE 117 138 138 ILE ILE A . n A 1 118 PRO 118 139 139 PRO PRO A . n A 1 119 LYS 119 140 140 LYS LYS A . n A 1 120 GLY 120 141 141 GLY GLY A . n A 1 121 CYS 121 142 142 CYS CYS A . n A 1 122 SER 122 143 143 SER SER A . n A 1 123 ARG 123 144 144 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 2001 2001 HOH HOH A . B 2 HOH 2 2002 2002 HOH HOH A . B 2 HOH 3 2003 2003 HOH HOH A . B 2 HOH 4 2004 2004 HOH HOH A . B 2 HOH 5 2005 2005 HOH HOH A . B 2 HOH 6 2006 2006 HOH HOH A . B 2 HOH 7 2007 2007 HOH HOH A . B 2 HOH 8 2008 2008 HOH HOH A . B 2 HOH 9 2009 2009 HOH HOH A . B 2 HOH 10 2010 2010 HOH HOH A . B 2 HOH 11 2011 2011 HOH HOH A . B 2 HOH 12 2012 2012 HOH HOH A . B 2 HOH 13 2013 2013 HOH HOH A . B 2 HOH 14 2014 2014 HOH HOH A . B 2 HOH 15 2015 2015 HOH HOH A . B 2 HOH 16 2016 2016 HOH HOH A . B 2 HOH 17 2017 2017 HOH HOH A . B 2 HOH 18 2018 2018 HOH HOH A . B 2 HOH 19 2019 2019 HOH HOH A . B 2 HOH 20 2020 2020 HOH HOH A . B 2 HOH 21 2021 2021 HOH HOH A . B 2 HOH 22 2022 2022 HOH HOH A . B 2 HOH 23 2023 2023 HOH HOH A . B 2 HOH 24 2024 2024 HOH HOH A . B 2 HOH 25 2025 2025 HOH HOH A . B 2 HOH 26 2026 2026 HOH HOH A . B 2 HOH 27 2027 2027 HOH HOH A . B 2 HOH 28 2028 2028 HOH HOH A . B 2 HOH 29 2029 2029 HOH HOH A . B 2 HOH 30 2030 2030 HOH HOH A . B 2 HOH 31 2031 2031 HOH HOH A . B 2 HOH 32 2032 2032 HOH HOH A . B 2 HOH 33 2033 2033 HOH HOH A . B 2 HOH 34 2034 2034 HOH HOH A . B 2 HOH 35 2035 2035 HOH HOH A . B 2 HOH 36 2036 2036 HOH HOH A . B 2 HOH 37 2037 2037 HOH HOH A . B 2 HOH 38 2038 2038 HOH HOH A . B 2 HOH 39 2039 2039 HOH HOH A . B 2 HOH 40 2040 2040 HOH HOH A . B 2 HOH 41 2041 2041 HOH HOH A . B 2 HOH 42 2042 2042 HOH HOH A . B 2 HOH 43 2043 2043 HOH HOH A . B 2 HOH 44 2044 2044 HOH HOH A . B 2 HOH 45 2045 2045 HOH HOH A . B 2 HOH 46 2046 2046 HOH HOH A . B 2 HOH 47 2047 2047 HOH HOH A . B 2 HOH 48 2048 2048 HOH HOH A . B 2 HOH 49 2049 2049 HOH HOH A . B 2 HOH 50 2050 2050 HOH HOH A . B 2 HOH 51 2051 2051 HOH HOH A . B 2 HOH 52 2052 2052 HOH HOH A . B 2 HOH 53 2053 2053 HOH HOH A . B 2 HOH 54 2054 2054 HOH HOH A . B 2 HOH 55 2055 2055 HOH HOH A . B 2 HOH 56 2056 2056 HOH HOH A . B 2 HOH 57 2057 2057 HOH HOH A . B 2 HOH 58 2058 2058 HOH HOH A . B 2 HOH 59 2059 2059 HOH HOH A . B 2 HOH 60 2060 2060 HOH HOH A . B 2 HOH 61 2061 2061 HOH HOH A . B 2 HOH 62 2062 2062 HOH HOH A . B 2 HOH 63 2063 2063 HOH HOH A . B 2 HOH 64 2064 2064 HOH HOH A . B 2 HOH 65 2065 2065 HOH HOH A . B 2 HOH 66 2066 2066 HOH HOH A . B 2 HOH 67 2067 2067 HOH HOH A . B 2 HOH 68 2068 2068 HOH HOH A . B 2 HOH 69 2069 2069 HOH HOH A . B 2 HOH 70 2070 2070 HOH HOH A . B 2 HOH 71 2071 2071 HOH HOH A . B 2 HOH 72 2072 2072 HOH HOH A . B 2 HOH 73 2073 2073 HOH HOH A . B 2 HOH 74 2074 2074 HOH HOH A . B 2 HOH 75 2075 2075 HOH HOH A . B 2 HOH 76 2076 2076 HOH HOH A . B 2 HOH 77 2077 2077 HOH HOH A . B 2 HOH 78 2078 2078 HOH HOH A . B 2 HOH 79 2079 2079 HOH HOH A . B 2 HOH 80 2080 2080 HOH HOH A . B 2 HOH 81 2081 2081 HOH HOH A . B 2 HOH 82 2082 2082 HOH HOH A . B 2 HOH 83 2083 2083 HOH HOH A . B 2 HOH 84 2084 2084 HOH HOH A . B 2 HOH 85 2085 2085 HOH HOH A . B 2 HOH 86 2086 2086 HOH HOH A . B 2 HOH 87 2087 2087 HOH HOH A . B 2 HOH 88 2088 2088 HOH HOH A . B 2 HOH 89 2089 2089 HOH HOH A . B 2 HOH 90 2090 2090 HOH HOH A . B 2 HOH 91 2091 2091 HOH HOH A . B 2 HOH 92 2092 2092 HOH HOH A . B 2 HOH 93 2093 2093 HOH HOH A . B 2 HOH 94 2094 2094 HOH HOH A . B 2 HOH 95 2095 2095 HOH HOH A . B 2 HOH 96 2096 2096 HOH HOH A . B 2 HOH 97 2097 2097 HOH HOH A . B 2 HOH 98 2098 2098 HOH HOH A . B 2 HOH 99 2099 2099 HOH HOH A . B 2 HOH 100 2100 2100 HOH HOH A . B 2 HOH 101 2101 2101 HOH HOH A . B 2 HOH 102 2102 2102 HOH HOH A . B 2 HOH 103 2103 2103 HOH HOH A . B 2 HOH 104 2104 2104 HOH HOH A . B 2 HOH 105 2105 2105 HOH HOH A . B 2 HOH 106 2106 2106 HOH HOH A . B 2 HOH 107 2107 2107 HOH HOH A . B 2 HOH 108 2108 2108 HOH HOH A . B 2 HOH 109 2109 2109 HOH HOH A . B 2 HOH 110 2110 2110 HOH HOH A . B 2 HOH 111 2111 2111 HOH HOH A . B 2 HOH 112 2112 2112 HOH HOH A . B 2 HOH 113 2113 2113 HOH HOH A . B 2 HOH 114 2114 2114 HOH HOH A . B 2 HOH 115 2115 2115 HOH HOH A . B 2 HOH 116 2116 2116 HOH HOH A . B 2 HOH 117 2117 2117 HOH HOH A . B 2 HOH 118 2118 2118 HOH HOH A . B 2 HOH 119 2119 2119 HOH HOH A . B 2 HOH 120 2120 2120 HOH HOH A . B 2 HOH 121 2121 2121 HOH HOH A . B 2 HOH 122 2122 2122 HOH HOH A . B 2 HOH 123 2123 2123 HOH HOH A . B 2 HOH 124 2124 2124 HOH HOH A . B 2 HOH 125 2125 2125 HOH HOH A . B 2 HOH 126 2126 2126 HOH HOH A . B 2 HOH 127 2127 2127 HOH HOH A . B 2 HOH 128 2128 2128 HOH HOH A . B 2 HOH 129 2129 2129 HOH HOH A . B 2 HOH 130 2130 2130 HOH HOH A . B 2 HOH 131 2131 2131 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-06-11 2 'Structure model' 1 1 2014-02-05 3 'Structure model' 1 2 2017-06-28 4 'Structure model' 1 3 2019-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 2 'Structure model' 'Non-polymer description' 3 2 'Structure model' Other 4 2 'Structure model' 'Source and taxonomy' 5 2 'Structure model' 'Structure summary' 6 2 'Structure model' 'Version format compliance' 7 3 'Structure model' 'Data collection' 8 4 'Structure model' 'Data collection' 9 4 'Structure model' 'Experimental preparation' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' diffrn_source 2 4 'Structure model' database_PDB_rev 3 4 'Structure model' database_PDB_rev_record 4 4 'Structure model' exptl_crystal_grow # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_diffrn_source.type' 2 4 'Structure model' '_exptl_crystal_grow.method' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language REFMAC refinement . ? 1 ? ? ? ? MOSFLM 'data reduction' . ? 2 ? ? ? ? SCALA 'data scaling' . ? 3 ? ? ? ? ARP/wARP phasing . ? 4 ? ? ? ? DM phasing . ? 5 ? ? ? ? SOLVE phasing . ? 6 ? ? ? ? # _pdbx_database_remark.id 650 _pdbx_database_remark.text ; HELIX DETERMINATION METHOD: DSSP ; # _pdbx_entry_details.entry_id 1DZO _pdbx_entry_details.compound_details ;CHAIN A IS A DELETION MUTANT, MISSING RESIDUES 1-28 OF THE NATIVE SEQUENCE. THE RECOMBINANT PROTEIN CONTAINS 7 N-TERMINAL RESIDUES DERIVED FROM THE EXPRESSION VECTOR. THE FIRST 3 HAVE NO DENSITY, THE OTHER FOUR HAVE BEEN MODELED AS RESIDUES 25 - 28 RESIDUES 128 - 144 FORM A DISULPHIDE BONDED LOOP (THE DSL) WHICH CONTAINS THE RECEPTOR BINDING SITE. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;RESIDUES 22-28 ARE FROM THE EXPRESSION VECTOR. RESIDUES 22-24 HAVE NOT BEEN MODELED DUE TO LACK OF ELECTRON DENSITY ; # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 120 ? ? CZ A ARG 120 ? ? NH1 A ARG 120 ? ? 124.07 120.30 3.77 0.50 N 2 1 NE A ARG 120 ? ? CZ A ARG 120 ? ? NH2 A ARG 120 ? ? 116.35 120.30 -3.95 0.50 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 30 ? CG ? A ARG 9 CG 2 1 Y 1 A ARG 30 ? CD ? A ARG 9 CD 3 1 Y 1 A ARG 30 ? NE ? A ARG 9 NE 4 1 Y 1 A ARG 30 ? CZ ? A ARG 9 CZ 5 1 Y 1 A ARG 30 ? NH1 ? A ARG 9 NH1 6 1 Y 1 A ARG 30 ? NH2 ? A ARG 9 NH2 7 1 Y 1 A LYS 68 ? CE ? A LYS 47 CE 8 1 Y 1 A LYS 68 ? NZ ? A LYS 47 NZ 9 1 Y 1 A LYS 88 ? CD ? A LYS 67 CD 10 1 Y 1 A LYS 88 ? CE ? A LYS 67 CE 11 1 Y 1 A LYS 88 ? NZ ? A LYS 67 NZ 12 1 Y 1 A LYS 110 ? CD ? A LYS 89 CD 13 1 Y 1 A LYS 110 ? CE ? A LYS 89 CE 14 1 Y 1 A LYS 110 ? NZ ? A LYS 89 NZ 15 1 Y 1 A LYS 128 ? CD ? A LYS 107 CD 16 1 Y 1 A LYS 128 ? CE ? A LYS 107 CE 17 1 Y 1 A LYS 128 ? NZ ? A LYS 107 NZ 18 1 Y 1 A GLU 135 ? CG ? A GLU 114 CG 19 1 Y 1 A GLU 135 ? CD ? A GLU 114 CD 20 1 Y 1 A GLU 135 ? OE1 ? A GLU 114 OE1 21 1 Y 1 A GLU 135 ? OE2 ? A GLU 114 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 22 ? A ALA 1 2 1 Y 1 A LEU 23 ? A LEU 2 3 1 Y 1 A GLU 24 ? A GLU 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #