data_1E8S # _entry.id 1E8S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1E8S PDBE EBI-5400 WWPDB D_1290005400 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1E8O _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CORE OF THE ALU DOMAIN OF THE MAMMALIAN SRP' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1E8S _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2000-09-29 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Weichenrieder, O.' 1 'Wild, K.' 2 'Strub, K.' 3 'Cusack, S.' 4 # _citation.id primary _citation.title 'Structure and Assembly of the Alu Domain of the Mammalian Signal Recognition Particle' _citation.journal_abbrev Nature _citation.journal_volume 408 _citation.page_first 167 _citation.page_last ? _citation.year 2000 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11089964 _citation.pdbx_database_id_DOI 10.1038/35041507 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Weichenrieder, O.' 1 primary 'Wild, K.' 2 primary 'Strub, K.' 3 primary 'Cusack, S.' 4 # _cell.entry_id 1E8S _cell.length_a 143.330 _cell.length_b 143.330 _cell.length_c 60.360 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1E8S _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN' 9996.567 1 ? ? ? ? 2 polymer man 'SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN' 12114.235 1 ? ? 'TRUNCATED AFTER K107' ? 3 polymer syn '7SL RNA, 88-MER' 28490.900 1 ? YES 'ALU RNA' 'G101-U164 AND A383-U399 OF 7SL RNA CIRCULAR PERMUTATION (G101 LINKED TO U399) ADDITIONAL' 4 non-polymer syn 'EUROPIUM (III) ION' 151.964 2 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 SRP9 2 SRP14 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;PQYQTWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKFHSQLMRLMVAKEARNV TMETE ; ;PQYQTWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKFHSQLMRLMVAKEARNV TMETE ; A ? 2 'polypeptide(L)' no no ;VLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVSSKEVNKFQM AYSNLLRANMDGLKKRDKKNKTKKTK ; ;VLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVSSKEVNKFQM AYSNLLRANMDGLKKRDKKNKTKKTK ; B ? 3 polyribonucleotide no no ;GCUAGCGAGACCCCGUCUCUGCCGGGCGCGGUGGCGCGCGCCUGUAGUCCCAGCUACUCGGGAGGCUGAGGUGGGAGGAU CGCUAGUC ; ;GCUAGCGAGACCCCGUCUCUGCCGGGCGCGGUGGCGCGCGCCUGUAGUCCCAGCUACUCGGGAGGCUGAGGUGGGAGGAU CGCUAGUC ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 GLN n 1 3 TYR n 1 4 GLN n 1 5 THR n 1 6 TRP n 1 7 GLU n 1 8 GLU n 1 9 PHE n 1 10 SER n 1 11 ARG n 1 12 ALA n 1 13 ALA n 1 14 GLU n 1 15 LYS n 1 16 LEU n 1 17 TYR n 1 18 LEU n 1 19 ALA n 1 20 ASP n 1 21 PRO n 1 22 MET n 1 23 LYS n 1 24 ALA n 1 25 ARG n 1 26 VAL n 1 27 VAL n 1 28 LEU n 1 29 LYS n 1 30 TYR n 1 31 ARG n 1 32 HIS n 1 33 SER n 1 34 ASP n 1 35 GLY n 1 36 ASN n 1 37 LEU n 1 38 CYS n 1 39 VAL n 1 40 LYS n 1 41 VAL n 1 42 THR n 1 43 ASP n 1 44 ASP n 1 45 LEU n 1 46 VAL n 1 47 CYS n 1 48 LEU n 1 49 VAL n 1 50 TYR n 1 51 LYS n 1 52 THR n 1 53 ASP n 1 54 GLN n 1 55 ALA n 1 56 GLN n 1 57 ASP n 1 58 VAL n 1 59 LYS n 1 60 LYS n 1 61 ILE n 1 62 GLU n 1 63 LYS n 1 64 PHE n 1 65 HIS n 1 66 SER n 1 67 GLN n 1 68 LEU n 1 69 MET n 1 70 ARG n 1 71 LEU n 1 72 MET n 1 73 VAL n 1 74 ALA n 1 75 LYS n 1 76 GLU n 1 77 ALA n 1 78 ARG n 1 79 ASN n 1 80 VAL n 1 81 THR n 1 82 MET n 1 83 GLU n 1 84 THR n 1 85 GLU n 2 1 VAL n 2 2 LEU n 2 3 LEU n 2 4 GLU n 2 5 SER n 2 6 GLU n 2 7 GLN n 2 8 PHE n 2 9 LEU n 2 10 THR n 2 11 GLU n 2 12 LEU n 2 13 THR n 2 14 ARG n 2 15 LEU n 2 16 PHE n 2 17 GLN n 2 18 LYS n 2 19 CYS n 2 20 ARG n 2 21 THR n 2 22 SER n 2 23 GLY n 2 24 SER n 2 25 VAL n 2 26 TYR n 2 27 ILE n 2 28 THR n 2 29 LEU n 2 30 LYS n 2 31 LYS n 2 32 TYR n 2 33 ASP n 2 34 GLY n 2 35 ARG n 2 36 THR n 2 37 LYS n 2 38 PRO n 2 39 ILE n 2 40 PRO n 2 41 LYS n 2 42 LYS n 2 43 GLY n 2 44 THR n 2 45 VAL n 2 46 GLU n 2 47 GLY n 2 48 PHE n 2 49 GLU n 2 50 PRO n 2 51 ALA n 2 52 ASP n 2 53 ASN n 2 54 LYS n 2 55 CYS n 2 56 LEU n 2 57 LEU n 2 58 ARG n 2 59 ALA n 2 60 THR n 2 61 ASP n 2 62 GLY n 2 63 LYS n 2 64 LYS n 2 65 LYS n 2 66 ILE n 2 67 SER n 2 68 THR n 2 69 VAL n 2 70 VAL n 2 71 SER n 2 72 SER n 2 73 LYS n 2 74 GLU n 2 75 VAL n 2 76 ASN n 2 77 LYS n 2 78 PHE n 2 79 GLN n 2 80 MET n 2 81 ALA n 2 82 TYR n 2 83 SER n 2 84 ASN n 2 85 LEU n 2 86 LEU n 2 87 ARG n 2 88 ALA n 2 89 ASN n 2 90 MET n 2 91 ASP n 2 92 GLY n 2 93 LEU n 2 94 LYS n 2 95 LYS n 2 96 ARG n 2 97 ASP n 2 98 LYS n 2 99 LYS n 2 100 ASN n 2 101 LYS n 2 102 THR n 2 103 LYS n 2 104 LYS n 2 105 THR n 2 106 LYS n 3 1 G n 3 2 C n 3 3 U n 3 4 A n 3 5 G n 3 6 C n 3 7 G n 3 8 A n 3 9 G n 3 10 A n 3 11 C n 3 12 C n 3 13 C n 3 14 C n 3 15 G n 3 16 U n 3 17 C n 3 18 U n 3 19 C n 3 20 U n 3 21 G n 3 22 C n 3 23 C n 3 24 G n 3 25 G n 3 26 G n 3 27 C n 3 28 G n 3 29 C n 3 30 G n 3 31 G n 3 32 U n 3 33 G n 3 34 G n 3 35 C n 3 36 G n 3 37 C n 3 38 G n 3 39 C n 3 40 G n 3 41 C n 3 42 C n 3 43 U n 3 44 G n 3 45 U n 3 46 A n 3 47 G n 3 48 U n 3 49 C n 3 50 C n 3 51 C n 3 52 A n 3 53 G n 3 54 C n 3 55 U n 3 56 A n 3 57 C n 3 58 U n 3 59 C n 3 60 G n 3 61 G n 3 62 G n 3 63 A n 3 64 G n 3 65 G n 3 66 C n 3 67 U n 3 68 G n 3 69 A n 3 70 G n 3 71 G n 3 72 U n 3 73 G n 3 74 G n 3 75 G n 3 76 A n 3 77 G n 3 78 G n 3 79 A n 3 80 U n 3 81 C n 3 82 G n 3 83 C n 3 84 U n 3 85 A n 3 86 G n 3 87 U n 3 88 C n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? 'CYTOPLASM, NUCLEUS?' ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? 'CYTOPLASM, NUCLEUS?' ? 'ESCHERICHIA COLI' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'HOMO SAPIENS' _pdbx_entity_src_syn.organism_common_name HUMAN _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details 'THE RNA WAS PRODUCED BY IN VITRO TRANSCRIPTION WITH T7 RNA POLYMERASE USING RIBOZYME TECHNOLOGY.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP SR09_HUMAN 1 ? ? P49458 ? 2 UNP SR14_HUMAN 2 ? ? P37108 ? 3 PDB 1E8S 3 ? ? 1E8S ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1E8S A 1 ? 85 ? P49458 1 ? 85 ? 2 86 2 2 1E8S B 1 ? 106 ? P37108 2 ? 107 ? 2 107 3 3 1E8S C 1 ? 88 ? 1E8S 380 ? 168 ? 380 168 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EU3 non-polymer . 'EUROPIUM (III) ION' ? 'Eu 3' 151.964 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1E8S _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.06 _exptl_crystal.density_percent_sol 66 _exptl_crystal.description 'EUROPIUM L(III) EDGE' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.00 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '50MM HEPES, 10MM MGCL2, 150MM NACL, 0.8 MM EU(NO3)3, 390MM (NH4)2SO4, 23% PEG400, pH 7.00' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1999-11-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.7757 1.0 2 1.7753 1.0 3 1.033 1.0 4 0.9326 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.7757,1.7753,1.033,0.9326 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 1E8S _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 4.000 _reflns.number_obs 5053 _reflns.number_all ? _reflns.percent_possible_obs 90.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.05900 _reflns.pdbx_netI_over_sigmaI 5.9000 _reflns.B_iso_Wilson_estimate 211.4 _reflns.pdbx_redundancy 2.900 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 4.00 _reflns_shell.d_res_low 4.10 _reflns_shell.percent_possible_all 59.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.54100 _reflns_shell.meanI_over_sigI_obs 1.500 _reflns_shell.pdbx_redundancy 1.90 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 1E8S _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 5448 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 3024867.55 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.46 _refine.ls_d_res_high 4.00 _refine.ls_percent_reflns_obs 96.2 _refine.ls_R_factor_obs 0.388 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.388 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 50.0 _refine.aniso_B[1][1] -6.33141 _refine.aniso_B[2][2] -6.33141 _refine.aniso_B[3][3] 12.6628 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.25 _refine.solvent_model_param_bsol 15 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 147 _refine_hist.pdbx_number_atoms_nucleic_acid 86 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 235 _refine_hist.d_res_high 4.00 _refine_hist.d_res_low 37.46 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.7 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.44 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 0.00 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 0.00 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 0.00 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 0.00 2.50 ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA-ALLATOM-MOD.PARAM DNA-RNA-ALLATOM-MOD.TOP 'X-RAY DIFFRACTION' 3 ION_EU.PARAM ION-EU.TOP # _struct.entry_id 1E8S _struct.title 'Alu domain of the mammalian SRP (potential Alu retroposition intermediate)' _struct.pdbx_descriptor 'SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN, SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'CA ATOMS ONLY, CHAIN A, B ; P ATOMS ONLY, CHAIN C' # _struct_keywords.entry_id 1E8S _struct_keywords.pdbx_keywords 'ALU RIBONUCLEOPROTEIN PARTICLE' _struct_keywords.text 'ALU RIBONUCLEOPROTEIN PARTICLE, ALU RNP ASSEMBLY AND DIMERISATION, TRANSLATIONAL CONTROL, ALU RETROPOSITION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE EU3 C1001' # _struct_site_gen.id 1 _struct_site_gen.site_id AC1 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id A _struct_site_gen.label_asym_id C _struct_site_gen.label_seq_id 76 _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id A _struct_site_gen.auth_asym_id C _struct_site_gen.auth_seq_id 156 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _database_PDB_matrix.entry_id 1E8S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1E8S _atom_sites.fract_transf_matrix[1][1] 0.006977 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006977 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016567 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C EU P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 2 ? ? ? A . n A 1 2 GLN 2 3 ? ? ? A . n A 1 3 TYR 3 4 ? ? ? A . n A 1 4 GLN 4 5 5 GLN GLN A . n A 1 5 THR 5 6 6 THR THR A . n A 1 6 TRP 6 7 7 TRP TRP A . n A 1 7 GLU 7 8 8 GLU GLU A . n A 1 8 GLU 8 9 9 GLU GLU A . n A 1 9 PHE 9 10 10 PHE PHE A . n A 1 10 SER 10 11 11 SER SER A . n A 1 11 ARG 11 12 12 ARG ARG A . n A 1 12 ALA 12 13 13 ALA ALA A . n A 1 13 ALA 13 14 14 ALA ALA A . n A 1 14 GLU 14 15 15 GLU GLU A . n A 1 15 LYS 15 16 16 LYS LYS A . n A 1 16 LEU 16 17 17 LEU LEU A . n A 1 17 TYR 17 18 18 TYR TYR A . n A 1 18 LEU 18 19 19 LEU LEU A . n A 1 19 ALA 19 20 20 ALA ALA A . n A 1 20 ASP 20 21 21 ASP ASP A . n A 1 21 PRO 21 22 22 PRO PRO A . n A 1 22 MET 22 23 23 MET MET A . n A 1 23 LYS 23 24 24 LYS LYS A . n A 1 24 ALA 24 25 25 ALA ALA A . n A 1 25 ARG 25 26 26 ARG ARG A . n A 1 26 VAL 26 27 27 VAL VAL A . n A 1 27 VAL 27 28 28 VAL VAL A . n A 1 28 LEU 28 29 29 LEU LEU A . n A 1 29 LYS 29 30 30 LYS LYS A . n A 1 30 TYR 30 31 31 TYR TYR A . n A 1 31 ARG 31 32 32 ARG ARG A . n A 1 32 HIS 32 33 33 HIS HIS A . n A 1 33 SER 33 34 34 SER SER A . n A 1 34 ASP 34 35 35 ASP ASP A . n A 1 35 GLY 35 36 36 GLY GLY A . n A 1 36 ASN 36 37 37 ASN ASN A . n A 1 37 LEU 37 38 38 LEU LEU A . n A 1 38 CYS 38 39 39 CYS CYS A . n A 1 39 VAL 39 40 40 VAL VAL A . n A 1 40 LYS 40 41 41 LYS LYS A . n A 1 41 VAL 41 42 42 VAL VAL A . n A 1 42 THR 42 43 43 THR THR A . n A 1 43 ASP 43 44 44 ASP ASP A . n A 1 44 ASP 44 45 45 ASP ASP A . n A 1 45 LEU 45 46 46 LEU LEU A . n A 1 46 VAL 46 47 47 VAL VAL A . n A 1 47 CYS 47 48 48 CYS CYS A . n A 1 48 LEU 48 49 49 LEU LEU A . n A 1 49 VAL 49 50 50 VAL VAL A . n A 1 50 TYR 50 51 51 TYR TYR A . n A 1 51 LYS 51 52 52 LYS LYS A . n A 1 52 THR 52 53 53 THR THR A . n A 1 53 ASP 53 54 54 ASP ASP A . n A 1 54 GLN 54 55 55 GLN GLN A . n A 1 55 ALA 55 56 56 ALA ALA A . n A 1 56 GLN 56 57 57 GLN GLN A . n A 1 57 ASP 57 58 58 ASP ASP A . n A 1 58 VAL 58 59 59 VAL VAL A . n A 1 59 LYS 59 60 60 LYS LYS A . n A 1 60 LYS 60 61 61 LYS LYS A . n A 1 61 ILE 61 62 62 ILE ILE A . n A 1 62 GLU 62 63 63 GLU GLU A . n A 1 63 LYS 63 64 64 LYS LYS A . n A 1 64 PHE 64 65 65 PHE PHE A . n A 1 65 HIS 65 66 66 HIS HIS A . n A 1 66 SER 66 67 67 SER SER A . n A 1 67 GLN 67 68 68 GLN GLN A . n A 1 68 LEU 68 69 69 LEU LEU A . n A 1 69 MET 69 70 70 MET MET A . n A 1 70 ARG 70 71 71 ARG ARG A . n A 1 71 LEU 71 72 72 LEU LEU A . n A 1 72 MET 72 73 73 MET MET A . n A 1 73 VAL 73 74 74 VAL VAL A . n A 1 74 ALA 74 75 75 ALA ALA A . n A 1 75 LYS 75 76 ? ? ? A . n A 1 76 GLU 76 77 ? ? ? A . n A 1 77 ALA 77 78 ? ? ? A . n A 1 78 ARG 78 79 ? ? ? A . n A 1 79 ASN 79 80 ? ? ? A . n A 1 80 VAL 80 81 ? ? ? A . n A 1 81 THR 81 82 ? ? ? A . n A 1 82 MET 82 83 ? ? ? A . n A 1 83 GLU 83 84 ? ? ? A . n A 1 84 THR 84 85 ? ? ? A . n A 1 85 GLU 85 86 ? ? ? A . n B 2 1 VAL 1 2 2 VAL VAL B . n B 2 2 LEU 2 3 3 LEU LEU B . n B 2 3 LEU 3 4 4 LEU LEU B . n B 2 4 GLU 4 5 5 GLU GLU B . n B 2 5 SER 5 6 6 SER SER B . n B 2 6 GLU 6 7 7 GLU GLU B . n B 2 7 GLN 7 8 8 GLN GLN B . n B 2 8 PHE 8 9 9 PHE PHE B . n B 2 9 LEU 9 10 10 LEU LEU B . n B 2 10 THR 10 11 11 THR THR B . n B 2 11 GLU 11 12 12 GLU GLU B . n B 2 12 LEU 12 13 13 LEU LEU B . n B 2 13 THR 13 14 14 THR THR B . n B 2 14 ARG 14 15 15 ARG ARG B . n B 2 15 LEU 15 16 16 LEU LEU B . n B 2 16 PHE 16 17 17 PHE PHE B . n B 2 17 GLN 17 18 18 GLN GLN B . n B 2 18 LYS 18 19 19 LYS LYS B . n B 2 19 CYS 19 20 20 CYS CYS B . n B 2 20 ARG 20 21 21 ARG ARG B . n B 2 21 THR 21 22 22 THR THR B . n B 2 22 SER 22 23 23 SER SER B . n B 2 23 GLY 23 24 24 GLY GLY B . n B 2 24 SER 24 25 25 SER SER B . n B 2 25 VAL 25 26 26 VAL VAL B . n B 2 26 TYR 26 27 27 TYR TYR B . n B 2 27 ILE 27 28 28 ILE ILE B . n B 2 28 THR 28 29 29 THR THR B . n B 2 29 LEU 29 30 30 LEU LEU B . n B 2 30 LYS 30 31 31 LYS LYS B . n B 2 31 LYS 31 32 32 LYS LYS B . n B 2 32 TYR 32 33 33 TYR TYR B . n B 2 33 ASP 33 34 34 ASP ASP B . n B 2 34 GLY 34 35 35 GLY GLY B . n B 2 35 ARG 35 36 ? ? ? B . n B 2 36 THR 36 37 ? ? ? B . n B 2 37 LYS 37 38 ? ? ? B . n B 2 38 PRO 38 39 ? ? ? B . n B 2 39 ILE 39 40 ? ? ? B . n B 2 40 PRO 40 41 ? ? ? B . n B 2 41 LYS 41 42 ? ? ? B . n B 2 42 LYS 42 43 ? ? ? B . n B 2 43 GLY 43 44 ? ? ? B . n B 2 44 THR 44 45 ? ? ? B . n B 2 45 VAL 45 46 ? ? ? B . n B 2 46 GLU 46 47 ? ? ? B . n B 2 47 GLY 47 48 ? ? ? B . n B 2 48 PHE 48 49 ? ? ? B . n B 2 49 GLU 49 50 ? ? ? B . n B 2 50 PRO 50 51 ? ? ? B . n B 2 51 ALA 51 52 ? ? ? B . n B 2 52 ASP 52 53 ? ? ? B . n B 2 53 ASN 53 54 54 ASN ASN B . n B 2 54 LYS 54 55 55 LYS LYS B . n B 2 55 CYS 55 56 56 CYS CYS B . n B 2 56 LEU 56 57 57 LEU LEU B . n B 2 57 LEU 57 58 58 LEU LEU B . n B 2 58 ARG 58 59 59 ARG ARG B . n B 2 59 ALA 59 60 60 ALA ALA B . n B 2 60 THR 60 61 61 THR THR B . n B 2 61 ASP 61 62 62 ASP ASP B . n B 2 62 GLY 62 63 63 GLY GLY B . n B 2 63 LYS 63 64 64 LYS LYS B . n B 2 64 LYS 64 65 65 LYS LYS B . n B 2 65 LYS 65 66 66 LYS LYS B . n B 2 66 ILE 66 67 67 ILE ILE B . n B 2 67 SER 67 68 68 SER SER B . n B 2 68 THR 68 69 69 THR THR B . n B 2 69 VAL 69 70 70 VAL VAL B . n B 2 70 VAL 70 71 71 VAL VAL B . n B 2 71 SER 71 72 72 SER SER B . n B 2 72 SER 72 73 73 SER SER B . n B 2 73 LYS 73 74 74 LYS LYS B . n B 2 74 GLU 74 75 75 GLU GLU B . n B 2 75 VAL 75 76 76 VAL VAL B . n B 2 76 ASN 76 77 77 ASN ASN B . n B 2 77 LYS 77 78 78 LYS LYS B . n B 2 78 PHE 78 79 79 PHE PHE B . n B 2 79 GLN 79 80 80 GLN GLN B . n B 2 80 MET 80 81 81 MET MET B . n B 2 81 ALA 81 82 82 ALA ALA B . n B 2 82 TYR 82 83 83 TYR TYR B . n B 2 83 SER 83 84 84 SER SER B . n B 2 84 ASN 84 85 85 ASN ASN B . n B 2 85 LEU 85 86 86 LEU LEU B . n B 2 86 LEU 86 87 87 LEU LEU B . n B 2 87 ARG 87 88 88 ARG ARG B . n B 2 88 ALA 88 89 89 ALA ALA B . n B 2 89 ASN 89 90 90 ASN ASN B . n B 2 90 MET 90 91 91 MET MET B . n B 2 91 ASP 91 92 92 ASP ASP B . n B 2 92 GLY 92 93 93 GLY GLY B . n B 2 93 LEU 93 94 94 LEU LEU B . n B 2 94 LYS 94 95 95 LYS LYS B . n B 2 95 LYS 95 96 ? ? ? B . n B 2 96 ARG 96 97 ? ? ? B . n B 2 97 ASP 97 98 ? ? ? B . n B 2 98 LYS 98 99 ? ? ? B . n B 2 99 LYS 99 100 ? ? ? B . n B 2 100 ASN 100 101 ? ? ? B . n B 2 101 LYS 101 102 ? ? ? B . n B 2 102 THR 102 103 ? ? ? B . n B 2 103 LYS 103 104 ? ? ? B . n B 2 104 LYS 104 105 ? ? ? B . n B 2 105 THR 105 106 ? ? ? B . n B 2 106 LYS 106 107 ? ? ? B . n C 3 1 G 1 380 380 G G C . n C 3 2 C 2 381 381 C C C . n C 3 3 U 3 382 382 U U C . n C 3 4 A 4 383 383 A A C . n C 3 5 G 5 384 384 G G C . n C 3 6 C 6 385 385 C C C . n C 3 7 G 7 386 386 G G C . n C 3 8 A 8 387 387 A A C . n C 3 9 G 9 388 388 G G C . n C 3 10 A 10 389 389 A A C . n C 3 11 C 11 390 390 C C C . n C 3 12 C 12 391 391 C C C . n C 3 13 C 13 392 392 C C C . n C 3 14 C 14 393 393 C C C . n C 3 15 G 15 394 394 G G C . n C 3 16 U 16 395 395 U U C . n C 3 17 C 17 396 396 C C C . n C 3 18 U 18 397 397 U U C . n C 3 19 C 19 398 398 C C C . n C 3 20 U 20 399 399 U U C . n C 3 21 G 21 101 101 G G C . n C 3 22 C 22 102 102 C C C . n C 3 23 C 23 103 103 C C C . n C 3 24 G 24 104 104 G G C . n C 3 25 G 25 105 105 G G C . n C 3 26 G 26 106 106 G G C . n C 3 27 C 27 107 107 C C C . n C 3 28 G 28 108 108 G G C . n C 3 29 C 29 109 109 C C C . n C 3 30 G 30 110 110 G G C . n C 3 31 G 31 111 111 G G C . n C 3 32 U 32 112 112 U U C . n C 3 33 G 33 113 113 G G C . n C 3 34 G 34 114 114 G G C . n C 3 35 C 35 115 115 C C C . n C 3 36 G 36 116 116 G G C . n C 3 37 C 37 117 117 C C C . n C 3 38 G 38 118 118 G G C . n C 3 39 C 39 119 119 C C C . n C 3 40 G 40 120 120 G G C . n C 3 41 C 41 121 121 C C C . n C 3 42 C 42 122 122 C C C . n C 3 43 U 43 123 123 U U C . n C 3 44 G 44 124 124 G G C . n C 3 45 U 45 125 125 U U C . n C 3 46 A 46 126 126 A A C . n C 3 47 G 47 127 127 G G C . n C 3 48 U 48 128 128 U U C . n C 3 49 C 49 129 129 C C C . n C 3 50 C 50 130 130 C C C . n C 3 51 C 51 131 131 C C C . n C 3 52 A 52 132 132 A A C . n C 3 53 G 53 133 133 G G C . n C 3 54 C 54 134 134 C C C . n C 3 55 U 55 135 135 U U C . n C 3 56 A 56 136 136 A A C . n C 3 57 C 57 137 137 C C C . n C 3 58 U 58 138 138 U U C . n C 3 59 C 59 139 139 C C C . n C 3 60 G 60 140 140 G G C . n C 3 61 G 61 141 141 G G C . n C 3 62 G 62 142 142 G G C . n C 3 63 A 63 143 143 A A C . n C 3 64 G 64 144 144 G G C . n C 3 65 G 65 145 145 G G C . n C 3 66 C 66 146 146 C C C . n C 3 67 U 67 147 147 U U C . n C 3 68 G 68 148 148 G G C . n C 3 69 A 69 149 149 A A C . n C 3 70 G 70 150 150 G G C . n C 3 71 G 71 151 151 G G C . n C 3 72 U 72 152 152 U U C . n C 3 73 G 73 153 153 G G C . n C 3 74 G 74 154 154 G G C . n C 3 75 G 75 155 155 G G C . n C 3 76 A 76 156 156 A A C . n C 3 77 G 77 157 157 G G C . n C 3 78 G 78 158 158 G G C . n C 3 79 A 79 159 159 A A C . n C 3 80 U 80 160 160 U U C . n C 3 81 C 81 161 161 C C C . n C 3 82 G 82 162 162 G G C . n C 3 83 C 83 163 163 C C C . n C 3 84 U 84 164 164 U U C . n C 3 85 A 85 165 165 A A C . n C 3 86 G 86 166 166 G G C . n C 3 87 U 87 167 ? ? ? C . n C 3 88 C 88 168 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EU3 1 1001 1001 EU3 EU3 C . E 4 EU3 1 1002 1002 EU3 EU3 C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2000-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL 'data reduction' . ? 1 MOSFLM 'data reduction' 'V. 6.0' ? 2 HKL 'data scaling' . ? 3 SCALA 'data scaling' . ? 4 SHARP phasing . ? 5 SOLOMON phasing . ? 6 CNS refinement 1.0 ? 7 # _pdbx_entry_details.entry_id 1E8S _pdbx_entry_details.compound_details ;SIGNAL-RECOGNITION-PARTICLE ASSEMBLY HAS A CRUCIAL ROLE IN TARGETING SECRETORY PROTEINS TO THE ROUGH ENDOPLASMIC RETICULUM MEMBRANE. SRP9 TOGETHER WITH SRP14 AND THE ALU PORTION OF THE SRP RNA, CONSTITUTES THE ELONGATION ARREST DOMAIN OF SRP. THE COMPLEX OF SRP9 AND SRP14 IS REQUIRED FOR SRP RNA BINDING. SIGNAL RECOGNITION PARTICLE CONSISTS OF A 7S RNA MOLECULE OF 300 NUCLEOTIDES AND SIX PROTEIN SUBUNITS: SRP72, SRP68, SRP54, SRP19, SRP14 AND SRP9. CHAIN C CONTAINS ENGINEERED MUTATIONS U119C, C152U, U153G ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 2 ? A PRO 1 2 1 Y 1 A GLN 3 ? A GLN 2 3 1 Y 1 A TYR 4 ? A TYR 3 4 1 Y 1 A LYS 76 ? A LYS 75 5 1 Y 1 A GLU 77 ? A GLU 76 6 1 Y 1 A ALA 78 ? A ALA 77 7 1 Y 1 A ARG 79 ? A ARG 78 8 1 Y 1 A ASN 80 ? A ASN 79 9 1 Y 1 A VAL 81 ? A VAL 80 10 1 Y 1 A THR 82 ? A THR 81 11 1 Y 1 A MET 83 ? A MET 82 12 1 Y 1 A GLU 84 ? A GLU 83 13 1 Y 1 A THR 85 ? A THR 84 14 1 Y 1 A GLU 86 ? A GLU 85 15 1 Y 1 B ARG 36 ? B ARG 35 16 1 Y 1 B THR 37 ? B THR 36 17 1 Y 1 B LYS 38 ? B LYS 37 18 1 Y 1 B PRO 39 ? B PRO 38 19 1 Y 1 B ILE 40 ? B ILE 39 20 1 Y 1 B PRO 41 ? B PRO 40 21 1 Y 1 B LYS 42 ? B LYS 41 22 1 Y 1 B LYS 43 ? B LYS 42 23 1 Y 1 B GLY 44 ? B GLY 43 24 1 Y 1 B THR 45 ? B THR 44 25 1 Y 1 B VAL 46 ? B VAL 45 26 1 Y 1 B GLU 47 ? B GLU 46 27 1 Y 1 B GLY 48 ? B GLY 47 28 1 Y 1 B PHE 49 ? B PHE 48 29 1 Y 1 B GLU 50 ? B GLU 49 30 1 Y 1 B PRO 51 ? B PRO 50 31 1 Y 1 B ALA 52 ? B ALA 51 32 1 Y 1 B ASP 53 ? B ASP 52 33 1 Y 1 B LYS 96 ? B LYS 95 34 1 Y 1 B ARG 97 ? B ARG 96 35 1 Y 1 B ASP 98 ? B ASP 97 36 1 Y 1 B LYS 99 ? B LYS 98 37 1 Y 1 B LYS 100 ? B LYS 99 38 1 Y 1 B ASN 101 ? B ASN 100 39 1 Y 1 B LYS 102 ? B LYS 101 40 1 Y 1 B THR 103 ? B THR 102 41 1 Y 1 B LYS 104 ? B LYS 103 42 1 Y 1 B LYS 105 ? B LYS 104 43 1 Y 1 B THR 106 ? B THR 105 44 1 Y 1 B LYS 107 ? B LYS 106 45 1 Y 1 C U 167 ? C U 87 46 1 Y 1 C C 168 ? C C 88 # loop_ _pdbx_coordinate_model.asym_id _pdbx_coordinate_model.type A 'CA ATOMS ONLY' B 'CA ATOMS ONLY' C 'P ATOMS ONLY' # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 'EUROPIUM (III) ION' _pdbx_entity_nonpoly.comp_id EU3 #