HEADER REPLICATION/DNA 01-SEP-96 1ECR TITLE ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN (TUS) COMPLEXED WITH TITLE 2 DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*TP*TP*AP*GP*TP*TP*AP*CP*AP*AP*CP*AP*TP*AP*CP*T)- COMPND 3 3; COMPND 4 CHAIN: B; COMPND 5 SYNONYM: TER; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*TP*AP*GP*TP*AP*TP*GP*TP*TP*GP*TP*AP*AP*CP*TP*A)- COMPND 9 3; COMPND 10 CHAIN: C; COMPND 11 SYNONYM: TER; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: PROTEIN (REPLICATION-TERMINATOR PROTEIN); COMPND 15 CHAIN: A; COMPND 16 SYNONYM: TUS; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 7 ORGANISM_TAXID: 37762; SOURCE 8 STRAIN: B; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PLYSS; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: T7 PROMOTER; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PHO100; SOURCE 14 EXPRESSION_SYSTEM_GENE: TUS KEYWDS DNA-BINDING, DNA REPLICATION, COMPLEX (DNA-BINDING PROTEIN-DNA), KEYWDS 2 REPLICATION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.KAMADA,K.MORIKAWA REVDAT 4 07-FEB-24 1ECR 1 REMARK REVDAT 3 13-JUL-11 1ECR 1 VERSN REVDAT 2 24-FEB-09 1ECR 1 VERSN REVDAT 1 05-SEP-97 1ECR 0 JRNL AUTH K.KAMADA,T.HORIUCHI,K.OHSUMI,N.SHIMAMOTO,K.MORIKAWA JRNL TITL STRUCTURE OF A REPLICATION-TERMINATOR PROTEIN COMPLEXED WITH JRNL TITL 2 DNA. JRNL REF NATURE V. 383 598 1996 JRNL REFN ISSN 0028-0836 JRNL PMID 8857533 JRNL DOI 10.1038/383598A0 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.KAMADA,K.OHSUMI,T.HORIUCHI,N.SHIMAMOTO,K.MORIKAWA REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY ANALYSIS OF THE REMARK 1 TITL 2 ESCHERICHIA COLI REPLICATION TERMINATOR PROTEIN COMPLEXED REMARK 1 TITL 3 WITH DNA REMARK 1 REF PROTEINS V. 24 402 1996 REMARK 1 REFN ISSN 0887-3585 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 12726 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.314 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2495 REMARK 3 NUCLEIC ACID ATOMS : 608 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 49 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ECR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000173015. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-DEC-94 REMARK 200 TEMPERATURE (KELVIN) : 288.00 REMARK 200 PH : 5.30 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : FUJI REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MACDENZO REMARK 200 DATA SCALING SOFTWARE : MACDENZO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14018 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.4 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.21700 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR AND ANOMALOUS REMARK 200 SCATTERING REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.30, MICRODIALYSIS, TEMPERATURE REMARK 280 293.00K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 115.36000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.07500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.07500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.68000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.07500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.07500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 173.04000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.07500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.07500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.68000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.07500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.07500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 173.04000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 115.36000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DT B 310 REMARK 465 DA C 342 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ARG A 3 REMARK 465 TYR A 4 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 DT B 311 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT B 311 C5' DT B 311 C4' 0.045 REMARK 500 DA B 312 C3' DA B 312 C2' -0.049 REMARK 500 DG B 313 C5' DG B 313 C4' 0.051 REMARK 500 DT B 314 C3' DT B 314 C2' -0.140 REMARK 500 DT B 314 C2' DT B 314 C1' -0.079 REMARK 500 DT B 314 O4' DT B 314 C1' 0.098 REMARK 500 DT B 314 O4' DT B 314 C4' 0.065 REMARK 500 DT B 315 C3' DT B 315 C2' -0.100 REMARK 500 DA B 316 C3' DA B 316 C2' -0.054 REMARK 500 DA B 319 C3' DA B 319 C2' -0.050 REMARK 500 DC B 320 C3' DC B 320 C2' -0.082 REMARK 500 DA B 321 C3' DA B 321 C2' -0.081 REMARK 500 DA C 328 C3' DA C 328 C2' -0.048 REMARK 500 DG C 333 C3' DG C 333 C2' -0.056 REMARK 500 DG C 333 C2' DG C 333 C1' -0.068 REMARK 500 DT C 334 C3' DT C 334 C2' -0.048 REMARK 500 DT C 334 O3' DT C 335 P -0.073 REMARK 500 DT C 335 P DT C 335 O5' -0.096 REMARK 500 DT C 335 C3' DT C 335 C2' -0.089 REMARK 500 DT C 335 C2' DT C 335 C1' -0.109 REMARK 500 DT C 335 O4' DT C 335 C1' 0.079 REMARK 500 DT C 335 O4' DT C 335 C4' 0.073 REMARK 500 DG C 336 C5' DG C 336 C4' 0.043 REMARK 500 DT C 337 C3' DT C 337 C2' -0.049 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT B 311 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG B 313 O4' - C1' - N9 ANGL. DEV. = 3.4 DEGREES REMARK 500 DT B 314 P - O5' - C5' ANGL. DEV. = 14.9 DEGREES REMARK 500 DT B 314 O4' - C4' - C3' ANGL. DEV. = -5.0 DEGREES REMARK 500 DT B 314 C4' - C3' - C2' ANGL. DEV. = 9.1 DEGREES REMARK 500 DT B 314 N1 - C1' - C2' ANGL. DEV. = -15.4 DEGREES REMARK 500 DT B 314 O4' - C1' - N1 ANGL. DEV. = 6.1 DEGREES REMARK 500 DT B 315 O4' - C1' - N1 ANGL. DEV. = 4.9 DEGREES REMARK 500 DA B 316 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DC B 317 O4' - C1' - N1 ANGL. DEV. = 4.0 DEGREES REMARK 500 DA B 318 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA B 319 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC B 320 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 DA B 321 O4' - C1' - N9 ANGL. DEV. = 2.8 DEGREES REMARK 500 DT B 322 O4' - C1' - N1 ANGL. DEV. = 2.1 DEGREES REMARK 500 DC B 324 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DT B 325 O4' - C1' - N1 ANGL. DEV. = 2.6 DEGREES REMARK 500 DA C 328 O4' - C1' - N9 ANGL. DEV. = 2.9 DEGREES REMARK 500 DG C 329 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DT C 330 O4' - C1' - N1 ANGL. DEV. = 2.7 DEGREES REMARK 500 DA C 331 O4' - C1' - N9 ANGL. DEV. = 3.0 DEGREES REMARK 500 DT C 332 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DG C 333 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 DT C 334 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DT C 335 P - O5' - C5' ANGL. DEV. = 14.5 DEGREES REMARK 500 DT C 335 O4' - C4' - C3' ANGL. DEV. = -4.7 DEGREES REMARK 500 DT C 335 C4' - C3' - C2' ANGL. DEV. = 7.4 DEGREES REMARK 500 DT C 335 O4' - C1' - N1 ANGL. DEV. = 9.1 DEGREES REMARK 500 DG C 336 O4' - C1' - N9 ANGL. DEV. = 3.7 DEGREES REMARK 500 DT C 337 O4' - C1' - N1 ANGL. DEV. = 3.9 DEGREES REMARK 500 DA C 338 O4' - C1' - N9 ANGL. DEV. = 4.4 DEGREES REMARK 500 DA C 339 O4' - C1' - N9 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 79 76.77 -68.88 REMARK 500 GLN A 81 70.78 -24.40 REMARK 500 SER A 83 134.38 -179.41 REMARK 500 LEU A 94 84.34 -150.18 REMARK 500 SER A 132 -19.43 -48.75 REMARK 500 THR A 136 -48.08 -19.06 REMARK 500 HIS A 146 -49.01 -151.69 REMARK 500 LEU A 147 51.20 -113.91 REMARK 500 THR A 152 -55.29 -28.11 REMARK 500 LYS A 195 -37.45 -38.97 REMARK 500 VAL A 200 -121.62 -89.55 REMARK 500 ALA A 201 133.08 176.79 REMARK 500 GLN A 248 55.89 -63.27 REMARK 500 CYS A 255 63.16 -119.86 REMARK 500 ASN A 284 41.17 -155.57 REMARK 500 ALA A 293 35.29 80.35 REMARK 500 GLN A 294 100.84 -46.04 REMARK 500 PRO A 295 105.85 -46.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DT B 314 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1ECR A 1 309 UNP P16525 TUS_ECOLI 1 309 DBREF 1ECR B 310 325 PDB 1ECR 1ECR 310 325 DBREF 1ECR C 327 342 PDB 1ECR 1ECR 327 342 SEQRES 1 B 16 DT DT DA DG DT DT DA DC DA DA DC DA DT SEQRES 2 B 16 DA DC DT SEQRES 1 C 16 DT DA DG DT DA DT DG DT DT DG DT DA DA SEQRES 2 C 16 DC DT DA SEQRES 1 A 309 MET ALA ARG TYR ASP LEU VAL ASP ARG LEU ASN THR THR SEQRES 2 A 309 PHE ARG GLN MET GLU GLN GLU LEU ALA ILE PHE ALA ALA SEQRES 3 A 309 HIS LEU GLU GLN HIS LYS LEU LEU VAL ALA ARG VAL PHE SEQRES 4 A 309 SER LEU PRO GLU VAL LYS LYS GLU ASP GLU HIS ASN PRO SEQRES 5 A 309 LEU ASN ARG ILE GLU VAL LYS GLN HIS LEU GLY ASN ASP SEQRES 6 A 309 ALA GLN SER LEU ALA LEU ARG HIS PHE ARG HIS LEU PHE SEQRES 7 A 309 ILE GLN GLN GLN SER GLU ASN ARG SER SER LYS ALA ALA SEQRES 8 A 309 VAL ARG LEU PRO GLY VAL LEU CYS TYR GLN VAL ASP ASN SEQRES 9 A 309 LEU SER GLN ALA ALA LEU VAL SER HIS ILE GLN HIS ILE SEQRES 10 A 309 ASN LYS LEU LYS THR THR PHE GLU HIS ILE VAL THR VAL SEQRES 11 A 309 GLU SER GLU LEU PRO THR ALA ALA ARG PHE GLU TRP VAL SEQRES 12 A 309 HIS ARG HIS LEU PRO GLY LEU ILE THR LEU ASN ALA TYR SEQRES 13 A 309 ARG THR LEU THR VAL LEU HIS ASP PRO ALA THR LEU ARG SEQRES 14 A 309 PHE GLY TRP ALA ASN LYS HIS ILE ILE LYS ASN LEU HIS SEQRES 15 A 309 ARG ASP GLU VAL LEU ALA GLN LEU GLU LYS SER LEU LYS SEQRES 16 A 309 SER PRO ARG SER VAL ALA PRO TRP THR ARG GLU GLU TRP SEQRES 17 A 309 GLN ARG LYS LEU GLU ARG GLU TYR GLN ASP ILE ALA ALA SEQRES 18 A 309 LEU PRO GLN ASN ALA LYS LEU LYS ILE LYS ARG PRO VAL SEQRES 19 A 309 LYS VAL GLN PRO ILE ALA ARG VAL TRP TYR LYS GLY ASP SEQRES 20 A 309 GLN LYS GLN VAL GLN HIS ALA CYS PRO THR PRO LEU ILE SEQRES 21 A 309 ALA LEU ILE ASN ARG ASP ASN GLY ALA GLY VAL PRO ASP SEQRES 22 A 309 VAL GLY GLU LEU LEU ASN TYR ASP ALA ASP ASN VAL GLN SEQRES 23 A 309 HIS ARG TYR LYS PRO GLN ALA GLN PRO LEU ARG LEU ILE SEQRES 24 A 309 ILE PRO ARG LEU HIS LEU TYR VAL ALA ASP FORMUL 4 HOH *49(H2 O) HELIX 1 1 LEU A 6 GLU A 29 1 24 HELIX 2 2 LYS A 46 ASP A 48 5 3 HELIX 3 3 GLY A 63 ARG A 75 1 13 HELIX 4 4 SER A 106 THR A 129 1 24 HELIX 5 5 THR A 136 ARG A 145 1 10 HELIX 6 6 THR A 152 TYR A 156 1 5 HELIX 7 7 ARG A 183 LYS A 195 1 13 HELIX 8 8 ARG A 205 ALA A 220 1 16 HELIX 9 9 ALA A 282 ASN A 284 5 3 HELIX 10 10 PRO A 301 LEU A 303 5 3 SHEET 1 A 5 VAL A 58 LEU A 62 0 SHEET 2 A 5 LYS A 32 LEU A 41 -1 N SER A 40 O LYS A 59 SHEET 3 A 5 GLY A 96 VAL A 102 -1 N GLN A 101 O LYS A 32 SHEET 4 A 5 LEU A 259 ASN A 264 1 N LEU A 259 O LEU A 98 SHEET 5 A 5 VAL A 161 HIS A 163 1 N LEU A 162 O ILE A 260 SHEET 1 B 3 THR A 167 ALA A 173 0 SHEET 2 B 3 GLN A 237 TYR A 244 -1 N TRP A 243 O THR A 167 SHEET 3 B 3 LYS A 249 ALA A 254 -1 N HIS A 253 O ALA A 240 SHEET 1 C 4 LYS A 175 LEU A 181 0 SHEET 2 C 4 LYS A 227 VAL A 234 -1 N VAL A 234 O LYS A 175 SHEET 3 C 4 LEU A 305 ALA A 308 -1 N ALA A 308 O LYS A 227 SHEET 4 C 4 ARG A 297 ILE A 300 -1 N ILE A 300 O LEU A 305 CISPEP 1 ALA A 201 PRO A 202 0 -0.23 CRYST1 68.150 68.150 230.720 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014674 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014674 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004334 0.00000