data_1FDN # _entry.id 1FDN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1FDN pdb_00001fdn 10.2210/pdb1fdn/pdb WWPDB D_1000173248 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1994-08-31 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' 4 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FDN _pdbx_database_status.recvd_initial_deposition_date 1994-03-31 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Duee, E.' 1 'Fanchon, E.' 2 'Vicat, J.' 3 'Sieker, L.C.' 4 'Meyer, J.' 5 'Moulis, J-M.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Refined crystal structure of the 2[4Fe-4S] ferredoxin from Clostridium acidurici at 1.84 A resolution.' J.Mol.Biol. 243 683 695 1994 JMOBAK UK 0022-2836 0070 ? 7966291 '10.1016/0022-2836(94)90041-8' 1 'Sequences of Clostridial Ferredoxins' Biochem.J. 294 622 ? 1993 BIJOAK UK 0264-6021 0043 ? ? ? 2 ;Crystal Structure of Clostridium Acidi-Urici Ferredoxin at 5 Angstroms Resolution Based on Measurements of Anomalous X-Ray Scattering at Multiple Wavelengths ; J.Biol.Chem. 263 18430 ? 1988 JBCHA3 US 0021-9258 0071 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Duee, E.D.' 1 ? primary 'Fanchon, E.' 2 ? primary 'Vicat, J.' 3 ? primary 'Sieker, L.C.' 4 ? primary 'Meyer, J.' 5 ? primary 'Moulis, J.M.' 6 ? 1 'Meyer, J.' 7 ? 1 'Moulis, J.-M.' 8 ? 1 'Scherrer, N.' 9 ? 1 'Gagnon, J.' 10 ? 1 'Ulrich, J.' 11 ? 2 'Krishnamurthy, H.M.' 12 ? 2 'Hendrickson, W.A.' 13 ? 2 'Orme-Johnson, W.H.' 14 ? 2 'Merritt, E.A.' 15 ? 2 'Phizackerley, R.P.' 16 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man FERREDOXIN 5540.179 1 ? ? ? ? 2 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 2 ? ? ? ? 3 water nat water 18.015 46 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code AYVINEACISCGACEPECPVNAISSGDDRYVIDADTCIDCGACAGVCPVDAPVQA _entity_poly.pdbx_seq_one_letter_code_can AYVINEACISCGACEPECPVNAISSGDDRYVIDADTCIDCGACAGVCPVDAPVQA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IRON/SULFUR CLUSTER' SF4 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 TYR n 1 3 VAL n 1 4 ILE n 1 5 ASN n 1 6 GLU n 1 7 ALA n 1 8 CYS n 1 9 ILE n 1 10 SER n 1 11 CYS n 1 12 GLY n 1 13 ALA n 1 14 CYS n 1 15 GLU n 1 16 PRO n 1 17 GLU n 1 18 CYS n 1 19 PRO n 1 20 VAL n 1 21 ASN n 1 22 ALA n 1 23 ILE n 1 24 SER n 1 25 SER n 1 26 GLY n 1 27 ASP n 1 28 ASP n 1 29 ARG n 1 30 TYR n 1 31 VAL n 1 32 ILE n 1 33 ASP n 1 34 ALA n 1 35 ASP n 1 36 THR n 1 37 CYS n 1 38 ILE n 1 39 ASP n 1 40 CYS n 1 41 GLY n 1 42 ALA n 1 43 CYS n 1 44 ALA n 1 45 GLY n 1 46 VAL n 1 47 CYS n 1 48 PRO n 1 49 VAL n 1 50 ASP n 1 51 ALA n 1 52 PRO n 1 53 VAL n 1 54 GLN n 1 55 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Clostridium _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium acidurici' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1556 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 TYR 2 2 2 TYR TYR A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 CYS 8 8 8 CYS CYS A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 CYS 11 11 11 CYS CYS A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 CYS 14 14 14 CYS CYS A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 CYS 18 18 18 CYS CYS A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 CYS 37 37 37 CYS CYS A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 CYS 43 43 43 CYS CYS A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 CYS 47 47 47 CYS CYS A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 PRO 52 52 52 PRO PRO A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 GLN 54 54 54 GLN GLN A . n A 1 55 ALA 55 55 55 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 1 56 56 SF4 FS4 A . C 2 SF4 1 57 57 SF4 FS4 A . D 3 HOH 1 58 58 HOH HOH A . D 3 HOH 2 59 59 HOH HOH A . D 3 HOH 3 60 60 HOH HOH A . D 3 HOH 4 61 61 HOH HOH A . D 3 HOH 5 62 62 HOH HOH A . D 3 HOH 6 63 63 HOH HOH A . D 3 HOH 7 64 64 HOH HOH A . D 3 HOH 8 65 65 HOH HOH A . D 3 HOH 9 66 66 HOH HOH A . D 3 HOH 10 67 67 HOH HOH A . D 3 HOH 11 68 68 HOH HOH A . D 3 HOH 12 69 69 HOH HOH A . D 3 HOH 13 70 70 HOH HOH A . D 3 HOH 14 71 71 HOH HOH A . D 3 HOH 15 72 72 HOH HOH A . D 3 HOH 16 73 73 HOH HOH A . D 3 HOH 17 74 74 HOH HOH A . D 3 HOH 18 75 75 HOH HOH A . D 3 HOH 19 76 76 HOH HOH A . D 3 HOH 20 77 77 HOH HOH A . D 3 HOH 21 78 78 HOH HOH A . D 3 HOH 22 79 79 HOH HOH A . D 3 HOH 23 80 80 HOH HOH A . D 3 HOH 24 81 81 HOH HOH A . D 3 HOH 25 82 82 HOH HOH A . D 3 HOH 26 83 83 HOH HOH A . D 3 HOH 27 84 84 HOH HOH A . D 3 HOH 28 85 85 HOH HOH A . D 3 HOH 29 86 86 HOH HOH A . D 3 HOH 30 87 87 HOH HOH A . D 3 HOH 31 88 88 HOH HOH A . D 3 HOH 32 89 89 HOH HOH A . D 3 HOH 33 90 90 HOH HOH A . D 3 HOH 34 91 91 HOH HOH A . D 3 HOH 35 92 92 HOH HOH A . D 3 HOH 36 93 93 HOH HOH A . D 3 HOH 37 94 94 HOH HOH A . D 3 HOH 38 95 95 HOH HOH A . D 3 HOH 39 96 96 HOH HOH A . D 3 HOH 40 97 97 HOH HOH A . D 3 HOH 41 98 98 HOH HOH A . D 3 HOH 42 99 99 HOH HOH A . D 3 HOH 43 100 100 HOH HOH A . D 3 HOH 44 101 101 HOH HOH A . D 3 HOH 45 102 102 HOH HOH A . D 3 HOH 46 103 103 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement . ? 2 X-PLOR phasing . ? 3 # _cell.entry_id 1FDN _cell.length_a 34.440 _cell.length_b 34.440 _cell.length_c 74.780 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FDN _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 1FDN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_percent_sol 38.49 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1FDN _refine.ls_number_reflns_obs 3772 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2. _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 18. _refine.ls_d_res_high 1.84 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.169 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.169 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ;THE EXACT POSITIONS OF ASP 27 AND ASP 28 ARE UNDEFINED FROM THE X-RAY DATA. THESE RESIDUES HAVE BEEN BUILT WITH A GOOD GEOMETRY FOR THE MAIN CHAIN AND REASONABLE CHI ANGLES FOR THE SIDE CHAINS. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 383 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 445 _refine_hist.d_res_high 1.84 _refine_hist.d_res_low 18. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.012 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 2.58 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1FDN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1FDN _struct.title 'REFINED CRYSTAL STRUCTURE OF THE 2[4FE-4S] FERREDOXIN FROM CLOSTRIDIUM ACIDURICI AT 1.84 ANGSTROMS RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FDN _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code FER_CLOAC _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P00198 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code AYVINEACISCGACEPECPVNAISSGDDRYVIDADTCIDCGACAGVCPVDAPVQA _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1FDN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 55 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00198 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 55 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 55 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 CYS A 14 ? CYS A 18 ? CYS A 14 CYS A 18 5 ? 5 HELX_P HELX_P2 2 GLY A 41 ? CYS A 47 ? GLY A 41 CYS A 47 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 8 SG ? ? ? 1_555 B SF4 . FE3 ? ? A CYS 8 A SF4 56 1_555 ? ? ? ? ? ? ? 2.236 ? ? metalc2 metalc ? ? A CYS 11 SG ? ? ? 1_555 B SF4 . FE4 ? ? A CYS 11 A SF4 56 1_555 ? ? ? ? ? ? ? 2.277 ? ? metalc3 metalc ? ? A CYS 14 SG ? ? ? 1_555 B SF4 . FE2 ? ? A CYS 14 A SF4 56 1_555 ? ? ? ? ? ? ? 2.232 ? ? metalc4 metalc ? ? A CYS 18 SG ? ? ? 1_555 C SF4 . FE1 ? ? A CYS 18 A SF4 57 1_555 ? ? ? ? ? ? ? 2.264 ? ? metalc5 metalc ? ? A CYS 37 SG ? ? ? 1_555 C SF4 . FE3 ? ? A CYS 37 A SF4 57 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc6 metalc ? ? A CYS 40 SG ? ? ? 1_555 C SF4 . FE4 ? ? A CYS 40 A SF4 57 1_555 ? ? ? ? ? ? ? 2.276 ? ? metalc7 metalc ? ? A CYS 43 SG ? ? ? 1_555 C SF4 . FE2 ? ? A CYS 43 A SF4 57 1_555 ? ? ? ? ? ? ? 2.247 ? ? metalc8 metalc ? ? A CYS 47 SG ? ? ? 1_555 B SF4 . FE1 ? ? A CYS 47 A SF4 56 1_555 ? ? ? ? ? ? ? 2.229 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 8 ? A CYS 8 ? 1_555 FE3 ? B SF4 . ? A SF4 56 ? 1_555 S1 ? B SF4 . ? A SF4 56 ? 1_555 111.3 ? 2 SG ? A CYS 8 ? A CYS 8 ? 1_555 FE3 ? B SF4 . ? A SF4 56 ? 1_555 S2 ? B SF4 . ? A SF4 56 ? 1_555 113.6 ? 3 S1 ? B SF4 . ? A SF4 56 ? 1_555 FE3 ? B SF4 . ? A SF4 56 ? 1_555 S2 ? B SF4 . ? A SF4 56 ? 1_555 99.3 ? 4 SG ? A CYS 8 ? A CYS 8 ? 1_555 FE3 ? B SF4 . ? A SF4 56 ? 1_555 S4 ? B SF4 . ? A SF4 56 ? 1_555 119.1 ? 5 S1 ? B SF4 . ? A SF4 56 ? 1_555 FE3 ? B SF4 . ? A SF4 56 ? 1_555 S4 ? B SF4 . ? A SF4 56 ? 1_555 106.7 ? 6 S2 ? B SF4 . ? A SF4 56 ? 1_555 FE3 ? B SF4 . ? A SF4 56 ? 1_555 S4 ? B SF4 . ? A SF4 56 ? 1_555 104.8 ? 7 SG ? A CYS 11 ? A CYS 11 ? 1_555 FE4 ? B SF4 . ? A SF4 56 ? 1_555 S1 ? B SF4 . ? A SF4 56 ? 1_555 124.1 ? 8 SG ? A CYS 11 ? A CYS 11 ? 1_555 FE4 ? B SF4 . ? A SF4 56 ? 1_555 S2 ? B SF4 . ? A SF4 56 ? 1_555 120.5 ? 9 S1 ? B SF4 . ? A SF4 56 ? 1_555 FE4 ? B SF4 . ? A SF4 56 ? 1_555 S2 ? B SF4 . ? A SF4 56 ? 1_555 99.9 ? 10 SG ? A CYS 11 ? A CYS 11 ? 1_555 FE4 ? B SF4 . ? A SF4 56 ? 1_555 S3 ? B SF4 . ? A SF4 56 ? 1_555 100.3 ? 11 S1 ? B SF4 . ? A SF4 56 ? 1_555 FE4 ? B SF4 . ? A SF4 56 ? 1_555 S3 ? B SF4 . ? A SF4 56 ? 1_555 102.8 ? 12 S2 ? B SF4 . ? A SF4 56 ? 1_555 FE4 ? B SF4 . ? A SF4 56 ? 1_555 S3 ? B SF4 . ? A SF4 56 ? 1_555 107.0 ? 13 SG ? A CYS 14 ? A CYS 14 ? 1_555 FE2 ? B SF4 . ? A SF4 56 ? 1_555 S1 ? B SF4 . ? A SF4 56 ? 1_555 112.7 ? 14 SG ? A CYS 14 ? A CYS 14 ? 1_555 FE2 ? B SF4 . ? A SF4 56 ? 1_555 S3 ? B SF4 . ? A SF4 56 ? 1_555 110.9 ? 15 S1 ? B SF4 . ? A SF4 56 ? 1_555 FE2 ? B SF4 . ? A SF4 56 ? 1_555 S3 ? B SF4 . ? A SF4 56 ? 1_555 100.1 ? 16 SG ? A CYS 14 ? A CYS 14 ? 1_555 FE2 ? B SF4 . ? A SF4 56 ? 1_555 S4 ? B SF4 . ? A SF4 56 ? 1_555 121.3 ? 17 S1 ? B SF4 . ? A SF4 56 ? 1_555 FE2 ? B SF4 . ? A SF4 56 ? 1_555 S4 ? B SF4 . ? A SF4 56 ? 1_555 105.1 ? 18 S3 ? B SF4 . ? A SF4 56 ? 1_555 FE2 ? B SF4 . ? A SF4 56 ? 1_555 S4 ? B SF4 . ? A SF4 56 ? 1_555 104.4 ? 19 SG ? A CYS 18 ? A CYS 18 ? 1_555 FE1 ? C SF4 . ? A SF4 57 ? 1_555 S2 ? C SF4 . ? A SF4 57 ? 1_555 111.3 ? 20 SG ? A CYS 18 ? A CYS 18 ? 1_555 FE1 ? C SF4 . ? A SF4 57 ? 1_555 S3 ? C SF4 . ? A SF4 57 ? 1_555 112.7 ? 21 S2 ? C SF4 . ? A SF4 57 ? 1_555 FE1 ? C SF4 . ? A SF4 57 ? 1_555 S3 ? C SF4 . ? A SF4 57 ? 1_555 104.0 ? 22 SG ? A CYS 18 ? A CYS 18 ? 1_555 FE1 ? C SF4 . ? A SF4 57 ? 1_555 S4 ? C SF4 . ? A SF4 57 ? 1_555 120.9 ? 23 S2 ? C SF4 . ? A SF4 57 ? 1_555 FE1 ? C SF4 . ? A SF4 57 ? 1_555 S4 ? C SF4 . ? A SF4 57 ? 1_555 103.2 ? 24 S3 ? C SF4 . ? A SF4 57 ? 1_555 FE1 ? C SF4 . ? A SF4 57 ? 1_555 S4 ? C SF4 . ? A SF4 57 ? 1_555 103.0 ? 25 SG ? A CYS 37 ? A CYS 37 ? 1_555 FE3 ? C SF4 . ? A SF4 57 ? 1_555 S1 ? C SF4 . ? A SF4 57 ? 1_555 106.6 ? 26 SG ? A CYS 37 ? A CYS 37 ? 1_555 FE3 ? C SF4 . ? A SF4 57 ? 1_555 S2 ? C SF4 . ? A SF4 57 ? 1_555 117.5 ? 27 S1 ? C SF4 . ? A SF4 57 ? 1_555 FE3 ? C SF4 . ? A SF4 57 ? 1_555 S2 ? C SF4 . ? A SF4 57 ? 1_555 100.6 ? 28 SG ? A CYS 37 ? A CYS 37 ? 1_555 FE3 ? C SF4 . ? A SF4 57 ? 1_555 S4 ? C SF4 . ? A SF4 57 ? 1_555 120.3 ? 29 S1 ? C SF4 . ? A SF4 57 ? 1_555 FE3 ? C SF4 . ? A SF4 57 ? 1_555 S4 ? C SF4 . ? A SF4 57 ? 1_555 105.3 ? 30 S2 ? C SF4 . ? A SF4 57 ? 1_555 FE3 ? C SF4 . ? A SF4 57 ? 1_555 S4 ? C SF4 . ? A SF4 57 ? 1_555 104.1 ? 31 SG ? A CYS 40 ? A CYS 40 ? 1_555 FE4 ? C SF4 . ? A SF4 57 ? 1_555 S1 ? C SF4 . ? A SF4 57 ? 1_555 124.2 ? 32 SG ? A CYS 40 ? A CYS 40 ? 1_555 FE4 ? C SF4 . ? A SF4 57 ? 1_555 S2 ? C SF4 . ? A SF4 57 ? 1_555 120.7 ? 33 S1 ? C SF4 . ? A SF4 57 ? 1_555 FE4 ? C SF4 . ? A SF4 57 ? 1_555 S2 ? C SF4 . ? A SF4 57 ? 1_555 100.8 ? 34 SG ? A CYS 40 ? A CYS 40 ? 1_555 FE4 ? C SF4 . ? A SF4 57 ? 1_555 S3 ? C SF4 . ? A SF4 57 ? 1_555 98.9 ? 35 S1 ? C SF4 . ? A SF4 57 ? 1_555 FE4 ? C SF4 . ? A SF4 57 ? 1_555 S3 ? C SF4 . ? A SF4 57 ? 1_555 103.8 ? 36 S2 ? C SF4 . ? A SF4 57 ? 1_555 FE4 ? C SF4 . ? A SF4 57 ? 1_555 S3 ? C SF4 . ? A SF4 57 ? 1_555 106.0 ? 37 SG ? A CYS 43 ? A CYS 43 ? 1_555 FE2 ? C SF4 . ? A SF4 57 ? 1_555 S1 ? C SF4 . ? A SF4 57 ? 1_555 110.0 ? 38 SG ? A CYS 43 ? A CYS 43 ? 1_555 FE2 ? C SF4 . ? A SF4 57 ? 1_555 S3 ? C SF4 . ? A SF4 57 ? 1_555 112.5 ? 39 S1 ? C SF4 . ? A SF4 57 ? 1_555 FE2 ? C SF4 . ? A SF4 57 ? 1_555 S3 ? C SF4 . ? A SF4 57 ? 1_555 101.1 ? 40 SG ? A CYS 43 ? A CYS 43 ? 1_555 FE2 ? C SF4 . ? A SF4 57 ? 1_555 S4 ? C SF4 . ? A SF4 57 ? 1_555 122.7 ? 41 S1 ? C SF4 . ? A SF4 57 ? 1_555 FE2 ? C SF4 . ? A SF4 57 ? 1_555 S4 ? C SF4 . ? A SF4 57 ? 1_555 105.0 ? 42 S3 ? C SF4 . ? A SF4 57 ? 1_555 FE2 ? C SF4 . ? A SF4 57 ? 1_555 S4 ? C SF4 . ? A SF4 57 ? 1_555 103.2 ? 43 SG ? A CYS 47 ? A CYS 47 ? 1_555 FE1 ? B SF4 . ? A SF4 56 ? 1_555 S2 ? B SF4 . ? A SF4 56 ? 1_555 112.0 ? 44 SG ? A CYS 47 ? A CYS 47 ? 1_555 FE1 ? B SF4 . ? A SF4 56 ? 1_555 S3 ? B SF4 . ? A SF4 56 ? 1_555 115.4 ? 45 S2 ? B SF4 . ? A SF4 56 ? 1_555 FE1 ? B SF4 . ? A SF4 56 ? 1_555 S3 ? B SF4 . ? A SF4 56 ? 1_555 103.4 ? 46 SG ? A CYS 47 ? A CYS 47 ? 1_555 FE1 ? B SF4 . ? A SF4 56 ? 1_555 S4 ? B SF4 . ? A SF4 56 ? 1_555 117.5 ? 47 S2 ? B SF4 . ? A SF4 56 ? 1_555 FE1 ? B SF4 . ? A SF4 56 ? 1_555 S4 ? B SF4 . ? A SF4 56 ? 1_555 102.1 ? 48 S3 ? B SF4 . ? A SF4 56 ? 1_555 FE1 ? B SF4 . ? A SF4 56 ? 1_555 S4 ? B SF4 . ? A SF4 56 ? 1_555 104.8 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 2 ? ILE A 4 ? TYR A 2 ILE A 4 A 2 PRO A 52 ? GLN A 54 ? PRO A 52 GLN A 54 B 1 ILE A 23 ? SER A 25 ? ILE A 23 SER A 25 B 2 TYR A 30 ? ILE A 32 ? TYR A 30 ILE A 32 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 3 ? O VAL A 3 N VAL A 53 ? N VAL A 53 B 1 2 O SER A 24 ? O SER A 24 N VAL A 31 ? N VAL A 31 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SF4 56 ? 7 'BINDING SITE FOR RESIDUE SF4 A 56' AC2 Software A SF4 57 ? 6 'BINDING SITE FOR RESIDUE SF4 A 57' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 CYS A 8 ? CYS A 8 . ? 1_555 ? 2 AC1 7 ILE A 9 ? ILE A 9 . ? 1_555 ? 3 AC1 7 CYS A 11 ? CYS A 11 . ? 1_555 ? 4 AC1 7 GLY A 12 ? GLY A 12 . ? 1_555 ? 5 AC1 7 CYS A 14 ? CYS A 14 . ? 1_555 ? 6 AC1 7 TYR A 30 ? TYR A 30 . ? 1_555 ? 7 AC1 7 CYS A 47 ? CYS A 47 . ? 1_555 ? 8 AC2 6 CYS A 18 ? CYS A 18 . ? 1_555 ? 9 AC2 6 CYS A 37 ? CYS A 37 . ? 1_555 ? 10 AC2 6 ILE A 38 ? ILE A 38 . ? 1_555 ? 11 AC2 6 CYS A 40 ? CYS A 40 . ? 1_555 ? 12 AC2 6 GLY A 41 ? GLY A 41 . ? 1_555 ? 13 AC2 6 CYS A 43 ? CYS A 43 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 29 ? ? CZ A ARG 29 ? ? NH1 A ARG 29 ? ? 123.46 120.30 3.16 0.50 N 2 1 CA A CYS 40 ? ? CB A CYS 40 ? ? SG A CYS 40 ? ? 122.36 114.20 8.16 1.10 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 28 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 83.66 _pdbx_validate_torsion.psi -46.72 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HOH O O N N 137 HOH H1 H N N 138 HOH H2 H N N 139 ILE N N N N 140 ILE CA C N S 141 ILE C C N N 142 ILE O O N N 143 ILE CB C N S 144 ILE CG1 C N N 145 ILE CG2 C N N 146 ILE CD1 C N N 147 ILE OXT O N N 148 ILE H H N N 149 ILE H2 H N N 150 ILE HA H N N 151 ILE HB H N N 152 ILE HG12 H N N 153 ILE HG13 H N N 154 ILE HG21 H N N 155 ILE HG22 H N N 156 ILE HG23 H N N 157 ILE HD11 H N N 158 ILE HD12 H N N 159 ILE HD13 H N N 160 ILE HXT H N N 161 PRO N N N N 162 PRO CA C N S 163 PRO C C N N 164 PRO O O N N 165 PRO CB C N N 166 PRO CG C N N 167 PRO CD C N N 168 PRO OXT O N N 169 PRO H H N N 170 PRO HA H N N 171 PRO HB2 H N N 172 PRO HB3 H N N 173 PRO HG2 H N N 174 PRO HG3 H N N 175 PRO HD2 H N N 176 PRO HD3 H N N 177 PRO HXT H N N 178 SER N N N N 179 SER CA C N S 180 SER C C N N 181 SER O O N N 182 SER CB C N N 183 SER OG O N N 184 SER OXT O N N 185 SER H H N N 186 SER H2 H N N 187 SER HA H N N 188 SER HB2 H N N 189 SER HB3 H N N 190 SER HG H N N 191 SER HXT H N N 192 SF4 FE1 FE N N 193 SF4 FE2 FE N N 194 SF4 FE3 FE N N 195 SF4 FE4 FE N N 196 SF4 S1 S N N 197 SF4 S2 S N N 198 SF4 S3 S N N 199 SF4 S4 S N N 200 THR N N N N 201 THR CA C N S 202 THR C C N N 203 THR O O N N 204 THR CB C N R 205 THR OG1 O N N 206 THR CG2 C N N 207 THR OXT O N N 208 THR H H N N 209 THR H2 H N N 210 THR HA H N N 211 THR HB H N N 212 THR HG1 H N N 213 THR HG21 H N N 214 THR HG22 H N N 215 THR HG23 H N N 216 THR HXT H N N 217 TYR N N N N 218 TYR CA C N S 219 TYR C C N N 220 TYR O O N N 221 TYR CB C N N 222 TYR CG C Y N 223 TYR CD1 C Y N 224 TYR CD2 C Y N 225 TYR CE1 C Y N 226 TYR CE2 C Y N 227 TYR CZ C Y N 228 TYR OH O N N 229 TYR OXT O N N 230 TYR H H N N 231 TYR H2 H N N 232 TYR HA H N N 233 TYR HB2 H N N 234 TYR HB3 H N N 235 TYR HD1 H N N 236 TYR HD2 H N N 237 TYR HE1 H N N 238 TYR HE2 H N N 239 TYR HH H N N 240 TYR HXT H N N 241 VAL N N N N 242 VAL CA C N S 243 VAL C C N N 244 VAL O O N N 245 VAL CB C N N 246 VAL CG1 C N N 247 VAL CG2 C N N 248 VAL OXT O N N 249 VAL H H N N 250 VAL H2 H N N 251 VAL HA H N N 252 VAL HB H N N 253 VAL HG11 H N N 254 VAL HG12 H N N 255 VAL HG13 H N N 256 VAL HG21 H N N 257 VAL HG22 H N N 258 VAL HG23 H N N 259 VAL HXT H N N 260 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HOH O H1 sing N N 129 HOH O H2 sing N N 130 ILE N CA sing N N 131 ILE N H sing N N 132 ILE N H2 sing N N 133 ILE CA C sing N N 134 ILE CA CB sing N N 135 ILE CA HA sing N N 136 ILE C O doub N N 137 ILE C OXT sing N N 138 ILE CB CG1 sing N N 139 ILE CB CG2 sing N N 140 ILE CB HB sing N N 141 ILE CG1 CD1 sing N N 142 ILE CG1 HG12 sing N N 143 ILE CG1 HG13 sing N N 144 ILE CG2 HG21 sing N N 145 ILE CG2 HG22 sing N N 146 ILE CG2 HG23 sing N N 147 ILE CD1 HD11 sing N N 148 ILE CD1 HD12 sing N N 149 ILE CD1 HD13 sing N N 150 ILE OXT HXT sing N N 151 PRO N CA sing N N 152 PRO N CD sing N N 153 PRO N H sing N N 154 PRO CA C sing N N 155 PRO CA CB sing N N 156 PRO CA HA sing N N 157 PRO C O doub N N 158 PRO C OXT sing N N 159 PRO CB CG sing N N 160 PRO CB HB2 sing N N 161 PRO CB HB3 sing N N 162 PRO CG CD sing N N 163 PRO CG HG2 sing N N 164 PRO CG HG3 sing N N 165 PRO CD HD2 sing N N 166 PRO CD HD3 sing N N 167 PRO OXT HXT sing N N 168 SER N CA sing N N 169 SER N H sing N N 170 SER N H2 sing N N 171 SER CA C sing N N 172 SER CA CB sing N N 173 SER CA HA sing N N 174 SER C O doub N N 175 SER C OXT sing N N 176 SER CB OG sing N N 177 SER CB HB2 sing N N 178 SER CB HB3 sing N N 179 SER OG HG sing N N 180 SER OXT HXT sing N N 181 SF4 FE1 S2 sing N N 182 SF4 FE1 S3 sing N N 183 SF4 FE1 S4 sing N N 184 SF4 FE2 S1 sing N N 185 SF4 FE2 S3 sing N N 186 SF4 FE2 S4 sing N N 187 SF4 FE3 S1 sing N N 188 SF4 FE3 S2 sing N N 189 SF4 FE3 S4 sing N N 190 SF4 FE4 S1 sing N N 191 SF4 FE4 S2 sing N N 192 SF4 FE4 S3 sing N N 193 THR N CA sing N N 194 THR N H sing N N 195 THR N H2 sing N N 196 THR CA C sing N N 197 THR CA CB sing N N 198 THR CA HA sing N N 199 THR C O doub N N 200 THR C OXT sing N N 201 THR CB OG1 sing N N 202 THR CB CG2 sing N N 203 THR CB HB sing N N 204 THR OG1 HG1 sing N N 205 THR CG2 HG21 sing N N 206 THR CG2 HG22 sing N N 207 THR CG2 HG23 sing N N 208 THR OXT HXT sing N N 209 TYR N CA sing N N 210 TYR N H sing N N 211 TYR N H2 sing N N 212 TYR CA C sing N N 213 TYR CA CB sing N N 214 TYR CA HA sing N N 215 TYR C O doub N N 216 TYR C OXT sing N N 217 TYR CB CG sing N N 218 TYR CB HB2 sing N N 219 TYR CB HB3 sing N N 220 TYR CG CD1 doub Y N 221 TYR CG CD2 sing Y N 222 TYR CD1 CE1 sing Y N 223 TYR CD1 HD1 sing N N 224 TYR CD2 CE2 doub Y N 225 TYR CD2 HD2 sing N N 226 TYR CE1 CZ doub Y N 227 TYR CE1 HE1 sing N N 228 TYR CE2 CZ sing Y N 229 TYR CE2 HE2 sing N N 230 TYR CZ OH sing N N 231 TYR OH HH sing N N 232 TYR OXT HXT sing N N 233 VAL N CA sing N N 234 VAL N H sing N N 235 VAL N H2 sing N N 236 VAL CA C sing N N 237 VAL CA CB sing N N 238 VAL CA HA sing N N 239 VAL C O doub N N 240 VAL C OXT sing N N 241 VAL CB CG1 sing N N 242 VAL CB CG2 sing N N 243 VAL CB HB sing N N 244 VAL CG1 HG11 sing N N 245 VAL CG1 HG12 sing N N 246 VAL CG1 HG13 sing N N 247 VAL CG2 HG21 sing N N 248 VAL CG2 HG22 sing N N 249 VAL CG2 HG23 sing N N 250 VAL OXT HXT sing N N 251 # _atom_sites.entry_id 1FDN _atom_sites.fract_transf_matrix[1][1] 0.029036 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029036 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013373 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'TWO ALTERNATE POSITIONS FOR THE SIDE CHAIN OF ASN 21 HAVE BEEN OBSERVED AND GIVEN OCCUPANCIES OF 0.5.' 2 ;THE EXACT POSITIONS OF ASP 27 AND ASP 28 ARE UNDEFINED FROM THE X-RAY DATA. THESE RESIDUES HAVE BEEN BUILT WITH A GOOD GEOMETRY FOR THE MAIN CHAIN AND REASONABLE CHI ANGLES FOR THE SIDE CHAINS. ; # loop_ _atom_type.symbol C FE N O S # loop_