data_1FIV # _entry.id 1FIV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.313 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1FIV WWPDB D_1000173304 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FIV _pdbx_database_status.recvd_initial_deposition_date 1995-05-04 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wlodawer, A.' 1 'Gustchina, A.' 2 'Reshetnikova, L.' 3 'Lubkowski, J.' 4 'Zdanov, A.' 5 # _citation.id primary _citation.title 'Structure of an inhibitor complex of the proteinase from feline immunodeficiency virus.' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 2 _citation.page_first 480 _citation.page_last 488 _citation.year 1995 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 7664111 _citation.pdbx_database_id_DOI 10.1038/nsb0695-480 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wlodawer, A.' 1 ? primary 'Gustchina, A.' 2 ? primary 'Reshetnikova, L.' 3 ? primary 'Lubkowski, J.' 4 ? primary 'Zdanov, A.' 5 ? primary 'Hui, K.Y.' 6 ? primary 'Angleton, E.L.' 7 ? primary 'Farmerie, W.G.' 8 ? primary 'Goodenow, M.M.' 9 ? primary 'Bhatt, D.' 10 ? # _cell.entry_id 1FIV _cell.length_a 50.650 _cell.length_b 50.650 _cell.length_c 74.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1FIV _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'FIV PROTEASE' 12842.825 1 3.4.23.16 ? ? ? 2 polymer syn 'FIV PROTEASE INHIBITOR ACE-ALN-VAL-STA-GLU-ALN-NH2' 821.981 1 ? ? ? ? 3 water nat water 18.015 94 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'FIV PROTEASE INHIBITOR LP-149' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;VGTTTTLEKRPEILIFVNGYPIKFLLDTGADITILNRRDFQVKNSIENGRQNMIGVGGGKRGTNYINVHLEIRDENYKTQ CIFGNVCVLEDNSLIQPLLGRDNMIKFNIRLVM ; ;VGTTTTLEKRPEILIFVNGYPIKFLLDTGADITILNRRDFQVKNSIENGRQNMIGVGGGKRGTNYINVHLEIRDENYKTQ CIFGNVCVLEDNSLIQPLLGRDNMIKFNIRLVM ; A ? 2 'polypeptide(L)' no yes '(ACE)(ALN)V(STA)E(ALN)(NH2)' XAVXEAX B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 GLY n 1 3 THR n 1 4 THR n 1 5 THR n 1 6 THR n 1 7 LEU n 1 8 GLU n 1 9 LYS n 1 10 ARG n 1 11 PRO n 1 12 GLU n 1 13 ILE n 1 14 LEU n 1 15 ILE n 1 16 PHE n 1 17 VAL n 1 18 ASN n 1 19 GLY n 1 20 TYR n 1 21 PRO n 1 22 ILE n 1 23 LYS n 1 24 PHE n 1 25 LEU n 1 26 LEU n 1 27 ASP n 1 28 THR n 1 29 GLY n 1 30 ALA n 1 31 ASP n 1 32 ILE n 1 33 THR n 1 34 ILE n 1 35 LEU n 1 36 ASN n 1 37 ARG n 1 38 ARG n 1 39 ASP n 1 40 PHE n 1 41 GLN n 1 42 VAL n 1 43 LYS n 1 44 ASN n 1 45 SER n 1 46 ILE n 1 47 GLU n 1 48 ASN n 1 49 GLY n 1 50 ARG n 1 51 GLN n 1 52 ASN n 1 53 MET n 1 54 ILE n 1 55 GLY n 1 56 VAL n 1 57 GLY n 1 58 GLY n 1 59 GLY n 1 60 LYS n 1 61 ARG n 1 62 GLY n 1 63 THR n 1 64 ASN n 1 65 TYR n 1 66 ILE n 1 67 ASN n 1 68 VAL n 1 69 HIS n 1 70 LEU n 1 71 GLU n 1 72 ILE n 1 73 ARG n 1 74 ASP n 1 75 GLU n 1 76 ASN n 1 77 TYR n 1 78 LYS n 1 79 THR n 1 80 GLN n 1 81 CYS n 1 82 ILE n 1 83 PHE n 1 84 GLY n 1 85 ASN n 1 86 VAL n 1 87 CYS n 1 88 VAL n 1 89 LEU n 1 90 GLU n 1 91 ASP n 1 92 ASN n 1 93 SER n 1 94 LEU n 1 95 ILE n 1 96 GLN n 1 97 PRO n 1 98 LEU n 1 99 LEU n 1 100 GLY n 1 101 ARG n 1 102 ASP n 1 103 ASN n 1 104 MET n 1 105 ILE n 1 106 LYS n 1 107 PHE n 1 108 ASN n 1 109 ILE n 1 110 ARG n 1 111 LEU n 1 112 VAL n 1 113 MET n 2 1 ACE n 2 2 ALN n 2 3 VAL n 2 4 STA n 2 5 GLU n 2 6 ALN n 2 7 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Feline immunodeficiency virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11673 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP POL_FIVPE 1 P16088 1 ;KEFGKLEGGASCSPSESNAASSNAICTSNGGETIGFVNYNKVGTTTTLEKRPEILIFVNGYPIKFLLDTGADITILNRRD FQVKNSIENGRQNMIGVGGGKRGTNYINVHLEIRDENYKTQCIFGNVCVLEDNSLIQPLLGRDNMIKFNIRLVMAQISDK IPVVKVKMKDPNKGPQIKQWPLTNEKIEALTEIVERLEKEGKVKRADSNNPWNTPVFAIKKKSGKWRMLIDFRELNKLTE KGAEVQLGLPHPAGLQIKKQVTVLDIGDAYFTIPLDPDYAPYTAFTLPRKNNAGPGRRFVWCSLPQGWILSPLIYQSTLD NIIQPFIRQNPQLDIYQYMDDIYIGSNLSKKEHKEKVEELRKLLLWWGFETPEDKLQEEPPYTWMGYELHPLTWTIQQKQ LDIPEQPTLNELQKLAGKINWASQAIPDLSIKALTNMMRGNQNLNSTRQWTKEARLEVQKAKKAIEEQVQLGYYDPSKEL YAKLSLVGPHQISYQVYQKDPEKILWYGKMSRQKKKAENTCDIALRACYKIREESIIRIGKEPRYEIPTSREAWESNLIN SPYLKAPPPEVEYIHAALNIKRALSMIKDAPIPGAETWYIDGGRKLGKAAKAAYWTDTGKWRVMDLEGSNQKAEIQALLL ALKAGSEEMNIITDSQYVINIILQQPDMMEGIWQEVLEELEKKTAIFIDWVPGHKGIPGNEEVDKLCQTMMIIEGDGILD KRSEDAGYDLLAAKEIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGSKGLDVLGGVIDEGYRGEIGVIMINVSRKSI TLMERQKIAQLIILPCKHEVLEQGKVVMDSERGDNGYGSTGVFSSWVDRIEEAEINHEKFHSDPQYLRTEFNLPKMVAEE IRRKCPVCRIIGEQVGGQLKIGPGIWQMDCTHFDGKIILVGIHVESGYIWAQIISQETADCTVKAVLQLLSAHNVTELQT DNGPNFKNQKMEGVLNYMGVKHKFGIPGNPQSQALVENVNHTLKVWIQKFLPETTSLDNALSLAVHSLNFKRRGRIGGMA PYELLAQQESLRIQDYFSAIPQKLQAQWIYYKDQKDKKWKGPMRVEYWGQGSVLLKDEEKGYFLIPRRHIRRVPEPCALP EGDE ; ? 2 PDB 1FIV 2 1FIV 201 XAVXEAX ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1FIV A 1 ? 113 ? P16088 42 ? 154 ? 4 116 2 2 1FIV B 1 ? 7 ? 1FIV 201 ? 207 ? 201 207 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ALN 'L-peptide linking' n NAPHTHALEN-2-YL-3-ALANINE ? 'C13 H13 N O2' 215.248 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 STA peptide-like . STATINE ? 'C8 H17 N O3' 175.225 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1FIV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_percent_sol 40.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 1994-09-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _reflns.entry_id 1FIV _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high ? _reflns.number_obs 7033 _reflns.number_all ? _reflns.percent_possible_obs 90. _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1FIV _refine.ls_number_reflns_obs 6527 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.0 _refine.ls_d_res_high 2.0 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.148 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.148 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 961 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 94 _refine_hist.number_atoms_total 1055 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 10.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.268 1.500 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.004 2.000 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 3.908 3.000 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 5.767 4.000 ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1FIV _struct.title 'STRUCTURE OF AN INHIBITOR COMPLEX OF PROTEINASE FROM FELINE IMMUNODEFICIENCY VIRUS' _struct.pdbx_descriptor 'FIV PROTEASE / INHIBITOR COMPLEX, NAPHTHYL GROUP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FIV _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'ACID PROTEINASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ;THIS FILE CONTAINS ONLY A MONOMER. IN ORDER TO CREATE A DIMERIC MOLECULE, CRYSTALLOGRAPHIC COORDINATES NEED TO BE TRANSFORMED TO (X-Y), -Y, (2/3-Z). ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 37 ? ASP A 39 ? ARG A 40 ASP A 42 5 ? 3 HELX_P HELX_P2 2 ARG A 101 ? LYS A 106 ? ARG A 104 LYS A 109 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? B ACE 1 C ? ? ? 1_555 B ALN 2 N ? ? B ACE 201 B ALN 202 1_555 ? ? ? ? ? ? ? 1.362 ? covale2 covale both ? B ALN 2 C ? ? ? 1_555 B VAL 3 N ? ? B ALN 202 B VAL 203 1_555 ? ? ? ? ? ? ? 1.349 ? covale3 covale both ? B VAL 3 C ? ? ? 1_555 B STA 4 N ? ? B VAL 203 B STA 204 1_555 ? ? ? ? ? ? ? 1.365 ? covale4 covale both ? B STA 4 C ? ? ? 1_555 B GLU 5 N ? ? B STA 204 B GLU 205 1_555 ? ? ? ? ? ? ? 1.350 ? covale5 covale both ? B GLU 5 C ? ? ? 1_555 B ALN 6 N ? ? B GLU 205 B ALN 206 1_555 ? ? ? ? ? ? ? 1.353 ? covale6 covale both ? B ALN 6 C ? ? ? 1_555 B NH2 7 N ? ? B ALN 206 B NH2 207 1_555 ? ? ? ? ? ? ? 1.216 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 20 ? LEU A 25 ? TYR A 23 LEU A 28 A 2 GLU A 12 ? VAL A 17 ? GLU A 15 VAL A 20 A 3 VAL A 68 ? ILE A 72 ? VAL A 71 ILE A 75 A 4 GLN A 80 ? GLY A 84 ? GLN A 83 GLY A 87 B 1 ILE A 34 ? ASN A 36 ? ILE A 37 ASN A 39 B 2 VAL A 86 ? LEU A 89 ? VAL A 89 LEU A 92 B 3 GLY A 58 ? TYR A 65 ? GLY A 61 TYR A 68 B 4 ARG A 50 ? GLY A 55 ? ARG A 53 GLY A 58 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 20 ? O TYR A 23 N VAL A 17 ? N VAL A 20 A 2 3 O PHE A 16 ? O PHE A 19 N GLU A 71 ? N GLU A 74 A 3 4 O VAL A 68 ? O VAL A 71 N GLY A 84 ? N GLY A 87 B 1 2 O LEU A 35 ? O LEU A 38 N CYS A 87 ? N CYS A 90 B 2 3 O VAL A 86 ? O VAL A 89 N TYR A 65 ? N TYR A 68 B 3 4 O GLY A 58 ? O GLY A 61 N GLY A 55 ? N GLY A 58 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 28 _struct_site.details 'BINDING SITE FOR CHAIN B OF FIV PROTEASE INHIBITOR ACE-ALN-VAL-STA-GLU-ALN-NH2' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 28 ARG A 10 ? ARG A 13 . ? 5_555 ? 2 AC1 28 PHE A 16 ? PHE A 19 . ? 2_655 ? 3 AC1 28 GLY A 19 ? GLY A 22 . ? 2_655 ? 4 AC1 28 PRO A 21 ? PRO A 24 . ? 6_655 ? 5 AC1 28 LEU A 25 ? LEU A 28 . ? 1_555 ? 6 AC1 28 ASP A 27 ? ASP A 30 . ? 5_555 ? 7 AC1 28 ASP A 27 ? ASP A 30 . ? 1_555 ? 8 AC1 28 GLY A 29 ? GLY A 32 . ? 1_555 ? 9 AC1 28 GLY A 29 ? GLY A 32 . ? 5_555 ? 10 AC1 28 ALA A 30 ? ALA A 33 . ? 1_555 ? 11 AC1 28 ALA A 30 ? ALA A 33 . ? 5_555 ? 12 AC1 28 ASP A 31 ? ASP A 34 . ? 5_555 ? 13 AC1 28 ASP A 31 ? ASP A 34 . ? 1_555 ? 14 AC1 28 ILE A 32 ? ILE A 35 . ? 5_555 ? 15 AC1 28 MET A 53 ? MET A 56 . ? 1_555 ? 16 AC1 28 MET A 53 ? MET A 56 . ? 5_555 ? 17 AC1 28 ILE A 54 ? ILE A 57 . ? 5_555 ? 18 AC1 28 ILE A 54 ? ILE A 57 . ? 1_555 ? 19 AC1 28 GLY A 55 ? GLY A 58 . ? 1_555 ? 20 AC1 28 VAL A 56 ? VAL A 59 . ? 1_555 ? 21 AC1 28 VAL A 56 ? VAL A 59 . ? 5_555 ? 22 AC1 28 ILE A 95 ? ILE A 98 . ? 5_555 ? 23 AC1 28 GLN A 96 ? GLN A 99 . ? 1_555 ? 24 AC1 28 GLN A 96 ? GLN A 99 . ? 5_555 ? 25 AC1 28 LEU A 98 ? LEU A 101 . ? 5_555 ? 26 AC1 28 LEU A 98 ? LEU A 101 . ? 1_555 ? 27 AC1 28 HOH D . ? HOH B 301 . ? 5_555 ? 28 AC1 28 HOH D . ? HOH B 301 . ? 1_555 ? # _database_PDB_matrix.entry_id 1FIV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1FIV _atom_sites.fract_transf_matrix[1][1] 0.019743 _atom_sites.fract_transf_matrix[1][2] 0.011399 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022798 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013423 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 4 4 VAL VAL A . n A 1 2 GLY 2 5 5 GLY GLY A . n A 1 3 THR 3 6 6 THR THR A . n A 1 4 THR 4 7 7 THR THR A . n A 1 5 THR 5 8 8 THR THR A . n A 1 6 THR 6 9 9 THR THR A . n A 1 7 LEU 7 10 10 LEU LEU A . n A 1 8 GLU 8 11 11 GLU GLU A . n A 1 9 LYS 9 12 12 LYS LYS A . n A 1 10 ARG 10 13 13 ARG ARG A . n A 1 11 PRO 11 14 14 PRO PRO A . n A 1 12 GLU 12 15 15 GLU GLU A . n A 1 13 ILE 13 16 16 ILE ILE A . n A 1 14 LEU 14 17 17 LEU LEU A . n A 1 15 ILE 15 18 18 ILE ILE A . n A 1 16 PHE 16 19 19 PHE PHE A . n A 1 17 VAL 17 20 20 VAL VAL A . n A 1 18 ASN 18 21 21 ASN ASN A . n A 1 19 GLY 19 22 22 GLY GLY A . n A 1 20 TYR 20 23 23 TYR TYR A . n A 1 21 PRO 21 24 24 PRO PRO A . n A 1 22 ILE 22 25 25 ILE ILE A . n A 1 23 LYS 23 26 26 LYS LYS A . n A 1 24 PHE 24 27 27 PHE PHE A . n A 1 25 LEU 25 28 28 LEU LEU A . n A 1 26 LEU 26 29 29 LEU LEU A . n A 1 27 ASP 27 30 30 ASP ASP A . n A 1 28 THR 28 31 31 THR THR A . n A 1 29 GLY 29 32 32 GLY GLY A . n A 1 30 ALA 30 33 33 ALA ALA A . n A 1 31 ASP 31 34 34 ASP ASP A . n A 1 32 ILE 32 35 35 ILE ILE A . n A 1 33 THR 33 36 36 THR THR A . n A 1 34 ILE 34 37 37 ILE ILE A . n A 1 35 LEU 35 38 38 LEU LEU A . n A 1 36 ASN 36 39 39 ASN ASN A . n A 1 37 ARG 37 40 40 ARG ARG A . n A 1 38 ARG 38 41 41 ARG ARG A . n A 1 39 ASP 39 42 42 ASP ASP A . n A 1 40 PHE 40 43 43 PHE PHE A . n A 1 41 GLN 41 44 44 GLN GLN A . n A 1 42 VAL 42 45 45 VAL VAL A . n A 1 43 LYS 43 46 46 LYS LYS A . n A 1 44 ASN 44 47 47 ASN ASN A . n A 1 45 SER 45 48 48 SER SER A . n A 1 46 ILE 46 49 49 ILE ILE A . n A 1 47 GLU 47 50 50 GLU GLU A . n A 1 48 ASN 48 51 51 ASN ASN A . n A 1 49 GLY 49 52 52 GLY GLY A . n A 1 50 ARG 50 53 53 ARG ARG A . n A 1 51 GLN 51 54 54 GLN GLN A . n A 1 52 ASN 52 55 55 ASN ASN A . n A 1 53 MET 53 56 56 MET MET A . n A 1 54 ILE 54 57 57 ILE ILE A . n A 1 55 GLY 55 58 58 GLY GLY A . n A 1 56 VAL 56 59 59 VAL VAL A . n A 1 57 GLY 57 60 60 GLY GLY A . n A 1 58 GLY 58 61 61 GLY GLY A . n A 1 59 GLY 59 62 62 GLY GLY A . n A 1 60 LYS 60 63 63 LYS LYS A . n A 1 61 ARG 61 64 64 ARG ARG A . n A 1 62 GLY 62 65 65 GLY GLY A . n A 1 63 THR 63 66 66 THR THR A . n A 1 64 ASN 64 67 67 ASN ASN A . n A 1 65 TYR 65 68 68 TYR TYR A . n A 1 66 ILE 66 69 69 ILE ILE A . n A 1 67 ASN 67 70 70 ASN ASN A . n A 1 68 VAL 68 71 71 VAL VAL A . n A 1 69 HIS 69 72 72 HIS HIS A . n A 1 70 LEU 70 73 73 LEU LEU A . n A 1 71 GLU 71 74 74 GLU GLU A . n A 1 72 ILE 72 75 75 ILE ILE A . n A 1 73 ARG 73 76 76 ARG ARG A . n A 1 74 ASP 74 77 77 ASP ASP A . n A 1 75 GLU 75 78 78 GLU GLU A . n A 1 76 ASN 76 79 79 ASN ASN A . n A 1 77 TYR 77 80 80 TYR TYR A . n A 1 78 LYS 78 81 81 LYS LYS A . n A 1 79 THR 79 82 82 THR THR A . n A 1 80 GLN 80 83 83 GLN GLN A . n A 1 81 CYS 81 84 84 CYS CYS A . n A 1 82 ILE 82 85 85 ILE ILE A . n A 1 83 PHE 83 86 86 PHE PHE A . n A 1 84 GLY 84 87 87 GLY GLY A . n A 1 85 ASN 85 88 88 ASN ASN A . n A 1 86 VAL 86 89 89 VAL VAL A . n A 1 87 CYS 87 90 90 CYS CYS A . n A 1 88 VAL 88 91 91 VAL VAL A . n A 1 89 LEU 89 92 92 LEU LEU A . n A 1 90 GLU 90 93 93 GLU GLU A . n A 1 91 ASP 91 94 94 ASP ASP A . n A 1 92 ASN 92 95 95 ASN ASN A . n A 1 93 SER 93 96 96 SER SER A . n A 1 94 LEU 94 97 97 LEU LEU A . n A 1 95 ILE 95 98 98 ILE ILE A . n A 1 96 GLN 96 99 99 GLN GLN A . n A 1 97 PRO 97 100 100 PRO PRO A . n A 1 98 LEU 98 101 101 LEU LEU A . n A 1 99 LEU 99 102 102 LEU LEU A . n A 1 100 GLY 100 103 103 GLY GLY A . n A 1 101 ARG 101 104 104 ARG ARG A . n A 1 102 ASP 102 105 105 ASP ASP A . n A 1 103 ASN 103 106 106 ASN ASN A . n A 1 104 MET 104 107 107 MET MET A . n A 1 105 ILE 105 108 108 ILE ILE A . n A 1 106 LYS 106 109 109 LYS LYS A . n A 1 107 PHE 107 110 110 PHE PHE A . n A 1 108 ASN 108 111 111 ASN ASN A . n A 1 109 ILE 109 112 112 ILE ILE A . n A 1 110 ARG 110 113 113 ARG ARG A . n A 1 111 LEU 111 114 114 LEU LEU A . n A 1 112 VAL 112 115 115 VAL VAL A . n A 1 113 MET 113 116 116 MET MET A . n B 2 1 ACE 1 201 201 ACE ACE B . n B 2 2 ALN 2 202 202 ALN ALN B . n B 2 3 VAL 3 203 203 VAL VAL B . n B 2 4 STA 4 204 204 STA STA B . n B 2 5 GLU 5 205 205 GLU GLU B . n B 2 6 ALN 6 206 206 ALN ALN B . n B 2 7 NH2 7 207 207 NH2 NH2 B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 302 302 HOH HOH A . C 3 HOH 2 303 303 HOH HOH A . C 3 HOH 3 304 304 HOH HOH A . C 3 HOH 4 305 305 HOH HOH A . C 3 HOH 5 306 306 HOH HOH A . C 3 HOH 6 307 307 HOH HOH A . C 3 HOH 7 308 308 HOH HOH A . C 3 HOH 8 309 309 HOH HOH A . C 3 HOH 9 310 310 HOH HOH A . C 3 HOH 10 311 311 HOH HOH A . C 3 HOH 11 312 312 HOH HOH A . C 3 HOH 12 313 313 HOH HOH A . C 3 HOH 13 314 314 HOH HOH A . C 3 HOH 14 315 315 HOH HOH A . C 3 HOH 15 316 316 HOH HOH A . C 3 HOH 16 317 317 HOH HOH A . C 3 HOH 17 318 318 HOH HOH A . C 3 HOH 18 319 319 HOH HOH A . C 3 HOH 19 320 320 HOH HOH A . C 3 HOH 20 321 321 HOH HOH A . C 3 HOH 21 322 322 HOH HOH A . C 3 HOH 22 323 323 HOH HOH A . C 3 HOH 23 324 324 HOH HOH A . C 3 HOH 24 325 325 HOH HOH A . C 3 HOH 25 326 326 HOH HOH A . C 3 HOH 26 327 327 HOH HOH A . C 3 HOH 27 328 328 HOH HOH A . C 3 HOH 28 329 329 HOH HOH A . C 3 HOH 29 330 330 HOH HOH A . C 3 HOH 30 331 331 HOH HOH A . C 3 HOH 31 332 332 HOH HOH A . C 3 HOH 32 333 333 HOH HOH A . C 3 HOH 33 334 334 HOH HOH A . C 3 HOH 34 335 335 HOH HOH A . C 3 HOH 35 336 336 HOH HOH A . C 3 HOH 36 337 337 HOH HOH A . C 3 HOH 37 338 338 HOH HOH A . C 3 HOH 38 339 339 HOH HOH A . C 3 HOH 39 340 340 HOH HOH A . C 3 HOH 40 341 341 HOH HOH A . C 3 HOH 41 342 342 HOH HOH A . C 3 HOH 42 343 343 HOH HOH A . C 3 HOH 43 344 344 HOH HOH A . C 3 HOH 44 345 345 HOH HOH A . C 3 HOH 45 346 346 HOH HOH A . C 3 HOH 46 347 347 HOH HOH A . C 3 HOH 47 348 348 HOH HOH A . C 3 HOH 48 349 349 HOH HOH A . C 3 HOH 49 350 350 HOH HOH A . C 3 HOH 50 351 351 HOH HOH A . C 3 HOH 51 352 352 HOH HOH A . C 3 HOH 52 353 353 HOH HOH A . C 3 HOH 53 354 354 HOH HOH A . C 3 HOH 54 355 355 HOH HOH A . C 3 HOH 55 356 356 HOH HOH A . C 3 HOH 56 357 357 HOH HOH A . C 3 HOH 57 358 358 HOH HOH A . C 3 HOH 58 359 359 HOH HOH A . C 3 HOH 59 360 360 HOH HOH A . C 3 HOH 60 361 361 HOH HOH A . C 3 HOH 61 362 362 HOH HOH A . C 3 HOH 62 363 363 HOH HOH A . C 3 HOH 63 364 364 HOH HOH A . C 3 HOH 64 365 365 HOH HOH A . C 3 HOH 65 366 366 HOH HOH A . C 3 HOH 66 367 367 HOH HOH A . C 3 HOH 67 368 368 HOH HOH A . C 3 HOH 68 369 369 HOH HOH A . C 3 HOH 69 370 370 HOH HOH A . C 3 HOH 70 371 371 HOH HOH A . C 3 HOH 71 372 372 HOH HOH A . C 3 HOH 72 373 373 HOH HOH A . C 3 HOH 73 374 374 HOH HOH A . C 3 HOH 74 375 375 HOH HOH A . C 3 HOH 75 376 376 HOH HOH A . C 3 HOH 76 377 377 HOH HOH A . C 3 HOH 77 378 378 HOH HOH A . C 3 HOH 78 379 379 HOH HOH A . C 3 HOH 79 380 380 HOH HOH A . C 3 HOH 80 381 381 HOH HOH A . C 3 HOH 81 382 382 HOH HOH A . C 3 HOH 82 383 383 HOH HOH A . C 3 HOH 83 384 384 HOH HOH A . C 3 HOH 84 385 385 HOH HOH A . C 3 HOH 85 386 386 HOH HOH A . C 3 HOH 86 387 387 HOH HOH A . C 3 HOH 87 388 388 HOH HOH A . C 3 HOH 88 389 389 HOH HOH A . C 3 HOH 89 390 390 HOH HOH A . C 3 HOH 90 391 391 HOH HOH A . C 3 HOH 91 392 392 HOH HOH A . C 3 HOH 92 393 393 HOH HOH A . C 3 HOH 93 394 394 HOH HOH A . D 3 HOH 1 301 301 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_000427 _pdbx_molecule_features.name 'FIV PROTEASE INHIBITOR LP-149; Ac-NA-Val-Sta-Glu-NA-NH2' _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000427 _pdbx_molecule.asym_id B # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 B ALN 2 B ALN 202 ? ALA NAPHTHALEN-2-YL-3-ALANINE 2 B ALN 6 B ALN 206 ? ALA NAPHTHALEN-2-YL-3-ALANINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 49.6666666667 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id STA _pdbx_struct_special_symmetry.auth_seq_id 204 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id STA _pdbx_struct_special_symmetry.label_seq_id 4 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-07-31 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-02-01 5 'Structure model' 1 4 2012-12-12 6 'Structure model' 1 5 2019-07-17 7 'Structure model' 1 6 2019-08-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' 'Derived calculations' 9 5 'Structure model' Other 10 6 'Structure model' 'Data collection' 11 6 'Structure model' 'Derived calculations' 12 6 'Structure model' Other 13 6 'Structure model' 'Refinement description' 14 7 'Structure model' 'Data collection' 15 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 6 'Structure model' pdbx_database_status 2 6 'Structure model' pdbx_struct_special_symmetry 3 6 'Structure model' software 4 6 'Structure model' struct_conn 5 7 'Structure model' software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_pdbx_database_status.process_site' 2 6 'Structure model' '_software.classification' 3 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 7 'Structure model' '_software.classification' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 PROLSQ refinement . ? 2 X-PLOR refinement . ? 3 XENGEN 'data reduction' . ? 4 X-PLOR phasing . ? 5 # _pdbx_entry_details.entry_id 1FIV _pdbx_entry_details.compound_details ;THE INHIBITOR ACE-ALN-VAL-STA-GLU-ALN-NH2 IS DISORDERED AROUND THE TWO-FOLD CRYSTALLOGRAPHIC AXIS. APPLICATION OF CRYSTALLOGRAPHIC SYMMETRY RESULTS IN THE OVERLAP OF THE TWO ORIENTATIONS. THE OCCUPANCY OF EACH ORIENTATION IS 1/2. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 337 ? ? O A HOH 339 ? ? 2.03 2 1 OD2 A ASP 42 ? ? O A HOH 310 ? ? 2.15 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 205 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OE2 _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 205 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.324 _pdbx_validate_rmsd_bond.bond_target_value 1.252 _pdbx_validate_rmsd_bond.bond_deviation 0.072 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 13 ? ? CZ A ARG 13 ? ? NH1 A ARG 13 ? ? 116.30 120.30 -4.00 0.50 N 2 1 CB A ASP 30 ? ? CG A ASP 30 ? ? OD1 A ASP 30 ? ? 111.11 118.30 -7.19 0.90 N 3 1 CB A ASP 30 ? ? CG A ASP 30 ? ? OD2 A ASP 30 ? ? 131.25 118.30 12.95 0.90 N 4 1 CB A ASP 34 ? ? CG A ASP 34 ? ? OD1 A ASP 34 ? ? 124.81 118.30 6.51 0.90 N 5 1 O A ILE 49 ? ? C A ILE 49 ? ? N A GLU 50 ? ? 132.73 122.70 10.03 1.60 Y 6 1 N A GLN 54 ? ? CA A GLN 54 ? ? CB A GLN 54 ? ? 98.81 110.60 -11.79 1.80 N 7 1 CB A TYR 80 ? ? CG A TYR 80 ? ? CD2 A TYR 80 ? ? 125.69 121.00 4.69 0.60 N 8 1 CA A GLN 83 ? ? CB A GLN 83 ? ? CG A GLN 83 ? ? 127.26 113.40 13.86 2.20 N 9 1 CA A CYS 84 ? A CB A CYS 84 ? A SG A CYS 84 ? A 123.69 114.20 9.49 1.10 N 10 1 CB A ASP 94 ? ? CG A ASP 94 ? ? OD1 A ASP 94 ? ? 125.86 118.30 7.56 0.90 N 11 1 NE A ARG 104 ? ? CZ A ARG 104 ? ? NH2 A ARG 104 ? ? 124.47 120.30 4.17 0.50 N 12 1 CG A MET 107 ? ? SD A MET 107 ? ? CE A MET 107 ? ? 110.56 100.20 10.36 1.60 N 13 1 CD A ARG 113 ? ? NE A ARG 113 ? ? CZ A ARG 113 ? ? 138.99 123.60 15.39 1.40 N 14 1 CA B STA 204 ? ? C B STA 204 ? ? N B GLU 205 ? ? 142.58 117.20 25.38 2.20 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 46 ? ? 48.99 -125.85 2 1 ASN A 51 ? ? -140.01 38.52 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 STA _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 204 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLU _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 205 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -121.62 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id STA _pdbx_validate_main_chain_plane.auth_asym_id B _pdbx_validate_main_chain_plane.auth_seq_id 204 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 31.63 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #