data_1FXY # _entry.id 1FXY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1FXY WWPDB D_1000173461 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FXY _pdbx_database_status.recvd_initial_deposition_date 1998-04-22 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hopfner, K.P.' 1 'Kopetzki, E.' 2 'Kresse, G.-B.' 3 'Huber, R.' 4 'Bode, W.' 5 'Engh, R.A.' 6 # _citation.id primary _citation.title 'New enzyme lineages by subdomain shuffling.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 95 _citation.page_first 9813 _citation.page_last 9818 _citation.year 1998 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9707558 _citation.pdbx_database_id_DOI 10.1073/pnas.95.17.9813 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hopfner, K.P.' 1 primary 'Kopetzki, E.' 2 primary 'Kresse, G.B.' 3 primary 'Bode, W.' 4 primary 'Huber, R.' 5 primary 'Engh, R.A.' 6 # _cell.entry_id 1FXY _cell.length_a 65.510 _cell.length_b 48.920 _cell.length_c 75.540 _cell.angle_alpha 90.00 _cell.angle_beta 111.46 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1FXY _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'COAGULATION FACTOR XA-TRYPSIN CHIMERA' 24668.814 1 ? 'Q20Y, E21N, C27V' ? ? 2 non-polymer syn 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 453.986 1 ? ? ? ? 3 water nat water 18.015 82 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF TKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKI TSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAANS ; _entity_poly.pdbx_seq_one_letter_code_can ;IVGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF TKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKI TSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAANS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 VAL n 1 3 GLY n 1 4 GLY n 1 5 TYR n 1 6 ASN n 1 7 CYS n 1 8 LYS n 1 9 ASP n 1 10 GLY n 1 11 GLU n 1 12 VAL n 1 13 PRO n 1 14 TRP n 1 15 GLN n 1 16 ALA n 1 17 LEU n 1 18 LEU n 1 19 ILE n 1 20 ASN n 1 21 GLU n 1 22 GLU n 1 23 ASN n 1 24 GLU n 1 25 GLY n 1 26 PHE n 1 27 CYS n 1 28 GLY n 1 29 GLY n 1 30 THR n 1 31 ILE n 1 32 LEU n 1 33 SER n 1 34 GLU n 1 35 PHE n 1 36 TYR n 1 37 ILE n 1 38 LEU n 1 39 THR n 1 40 ALA n 1 41 ALA n 1 42 HIS n 1 43 CYS n 1 44 LEU n 1 45 TYR n 1 46 GLN n 1 47 ALA n 1 48 LYS n 1 49 ARG n 1 50 PHE n 1 51 LYS n 1 52 VAL n 1 53 ARG n 1 54 VAL n 1 55 GLY n 1 56 ASP n 1 57 ARG n 1 58 ASN n 1 59 THR n 1 60 GLU n 1 61 GLN n 1 62 GLU n 1 63 GLU n 1 64 GLY n 1 65 GLY n 1 66 GLU n 1 67 ALA n 1 68 VAL n 1 69 HIS n 1 70 GLU n 1 71 VAL n 1 72 GLU n 1 73 VAL n 1 74 VAL n 1 75 ILE n 1 76 LYS n 1 77 HIS n 1 78 ASN n 1 79 ARG n 1 80 PHE n 1 81 THR n 1 82 LYS n 1 83 GLU n 1 84 THR n 1 85 TYR n 1 86 ASP n 1 87 PHE n 1 88 ASP n 1 89 ILE n 1 90 ALA n 1 91 VAL n 1 92 LEU n 1 93 ARG n 1 94 LEU n 1 95 LYS n 1 96 THR n 1 97 PRO n 1 98 ILE n 1 99 THR n 1 100 PHE n 1 101 ARG n 1 102 MET n 1 103 ASN n 1 104 VAL n 1 105 ALA n 1 106 PRO n 1 107 ALA n 1 108 SER n 1 109 LEU n 1 110 PRO n 1 111 THR n 1 112 ALA n 1 113 PRO n 1 114 PRO n 1 115 ALA n 1 116 THR n 1 117 GLY n 1 118 THR n 1 119 LYS n 1 120 CYS n 1 121 LEU n 1 122 ILE n 1 123 SER n 1 124 GLY n 1 125 TRP n 1 126 GLY n 1 127 ASN n 1 128 THR n 1 129 ALA n 1 130 SER n 1 131 SER n 1 132 GLY n 1 133 ALA n 1 134 ASP n 1 135 TYR n 1 136 PRO n 1 137 ASP n 1 138 GLU n 1 139 LEU n 1 140 GLN n 1 141 CYS n 1 142 LEU n 1 143 ASP n 1 144 ALA n 1 145 PRO n 1 146 VAL n 1 147 LEU n 1 148 SER n 1 149 GLN n 1 150 ALA n 1 151 LYS n 1 152 CYS n 1 153 GLU n 1 154 ALA n 1 155 SER n 1 156 TYR n 1 157 PRO n 1 158 GLY n 1 159 LYS n 1 160 ILE n 1 161 THR n 1 162 SER n 1 163 ASN n 1 164 MET n 1 165 PHE n 1 166 CYS n 1 167 VAL n 1 168 GLY n 1 169 PHE n 1 170 LEU n 1 171 GLU n 1 172 GLY n 1 173 GLY n 1 174 LYS n 1 175 ASP n 1 176 SER n 1 177 CYS n 1 178 GLN n 1 179 GLY n 1 180 ASP n 1 181 SER n 1 182 GLY n 1 183 GLY n 1 184 PRO n 1 185 VAL n 1 186 VAL n 1 187 CYS n 1 188 ASN n 1 189 GLY n 1 190 GLN n 1 191 LEU n 1 192 GLN n 1 193 GLY n 1 194 VAL n 1 195 VAL n 1 196 SER n 1 197 TRP n 1 198 GLY n 1 199 ASP n 1 200 GLY n 1 201 CYS n 1 202 ALA n 1 203 GLN n 1 204 LYS n 1 205 ASN n 1 206 LYS n 1 207 PRO n 1 208 GLY n 1 209 VAL n 1 210 TYR n 1 211 THR n 1 212 LYS n 1 213 VAL n 1 214 TYR n 1 215 ASN n 1 216 TYR n 1 217 VAL n 1 218 LYS n 1 219 TRP n 1 220 ILE n 1 221 LYS n 1 222 ASN n 1 223 THR n 1 224 ILE n 1 225 ALA n 1 226 ALA n 1 227 ASN n 1 228 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain UT5600 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRY1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P07477 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1FXY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 108 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 228 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P07477 _struct_ref_seq.db_align_beg 127 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 247 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 122 _struct_ref_seq.pdbx_auth_seq_align_end 246 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0G6 peptide-like . 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' PPACK 'C21 H34 Cl N6 O3 1' 453.986 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1FXY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_percent_sol 46.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'PROTEIN WAS CRYSTALLIZED FROM 15% PEG 6K, 100 MM HEPES, PH 7.8.' # _diffrn.id 1 _diffrn.ambient_temp 280 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1995-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1FXY _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 2.15 _reflns.number_obs ? _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1FXY _refine.ls_number_reflns_obs 10714 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 1000000. _refine.pdbx_data_cutoff_low_absF 0.001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.15 _refine.ls_percent_reflns_obs 90.9 _refine.ls_R_factor_obs 0.18 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18 _refine.ls_R_factor_R_free 0.245 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1730 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 1842 _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.237 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 ? ? 'X-RAY DIFFRACTION' # _struct.entry_id 1FXY _struct.title 'COAGULATION FACTOR XA-TRYPSIN CHIMERA INHIBITED WITH D-PHE-PRO-ARG-CHLOROMETHYLKETONE' _struct.pdbx_descriptor 'COAGULATION FACTOR XA-TRYPSIN CHIMERA, D-PHE-PRO-ARG-CHLOROMETHYLKETONE (PPACK)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FXY _struct_keywords.pdbx_keywords 'hydrolase/hydrolase inhibitor' _struct_keywords.text 'CHIMERA, PROTEASE, CHLOROMETHYLKETONE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 41 ? CYS A 43 ? ALA A 56 CYS A 58 5 ? 3 HELX_P HELX_P2 2 GLN A 149 ? SER A 155 ? GLN A 165 SER A 171 1 ? 7 HELX_P HELX_P3 3 VAL A 213 ? ALA A 226 ? VAL A 231 ALA A 244 5 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 141 SG ? ? A CYS 22 A CYS 157 1_555 ? ? ? ? ? ? ? 2.020 ? disulf2 disulf ? ? A CYS 27 SG ? ? ? 1_555 A CYS 43 SG ? ? A CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? 2.026 ? disulf3 disulf ? ? A CYS 120 SG ? ? ? 1_555 A CYS 187 SG ? ? A CYS 136 A CYS 201 1_555 ? ? ? ? ? ? ? 2.031 ? disulf4 disulf ? ? A CYS 152 SG ? ? ? 1_555 A CYS 166 SG ? ? A CYS 168 A CYS 182 1_555 ? ? ? ? ? ? ? 2.030 ? disulf5 disulf ? ? A CYS 177 SG ? ? ? 1_555 A CYS 201 SG ? ? A CYS 191 A CYS 220 1_555 ? ? ? ? ? ? ? 2.025 ? covale1 covale ? ? A SER 181 OG ? ? ? 1_555 B 0G6 . C2 ? ? A SER 195 A 0G6 1 1_555 ? ? ? ? ? ? ? 1.411 ? covale2 covale ? ? A HIS 42 NE2 ? ? ? 1_555 B 0G6 . C3 ? ? A HIS 57 A 0G6 1 1_555 ? ? ? ? ? ? ? 1.500 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 66 ? GLU A 70 ? GLU A 80 GLU A 84 A 2 LYS A 51 ? GLY A 55 ? LYS A 65 GLY A 69 A 3 GLN A 15 ? ILE A 19 ? GLN A 30 ILE A 34 A 4 GLY A 25 ? THR A 30 ? GLY A 40 THR A 45 B 1 TYR A 36 ? THR A 39 ? TYR A 51 THR A 54 B 2 ALA A 90 ? LEU A 94 ? ALA A 104 LEU A 108 B 3 VAL A 71 ? LYS A 76 ? VAL A 85 LYS A 90 C 1 GLN A 140 ? PRO A 145 ? GLN A 156 PRO A 161 C 2 LYS A 119 ? GLY A 124 ? LYS A 135 GLY A 140 C 3 PRO A 184 ? CYS A 187 ? PRO A 198 CYS A 201 C 4 GLN A 190 ? TRP A 197 ? GLN A 204 TRP A 215 C 5 GLY A 208 ? LYS A 212 ? GLY A 226 LYS A 230 C 6 MET A 164 ? VAL A 167 ? MET A 180 VAL A 183 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 67 ? O ALA A 81 N VAL A 54 ? N VAL A 68 A 2 3 O LYS A 51 ? O LYS A 65 N ILE A 19 ? N ILE A 34 A 3 4 O ALA A 16 ? O ALA A 31 N GLY A 29 ? N GLY A 44 B 1 2 O ILE A 37 ? O ILE A 52 N LEU A 92 ? N LEU A 106 B 2 3 O VAL A 91 ? O VAL A 105 N ILE A 75 ? N ILE A 89 C 1 2 O GLN A 140 ? O GLN A 156 N GLY A 124 ? N GLY A 140 C 2 3 O LEU A 121 ? O LEU A 137 N VAL A 186 ? N VAL A 200 C 3 4 O VAL A 185 ? O VAL A 199 N GLY A 193 ? N GLY A 211 C 4 5 O VAL A 194 ? O VAL A 212 N THR A 211 ? N THR A 229 C 5 6 O GLY A 208 ? O GLY A 226 N VAL A 167 ? N VAL A 183 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 22 _struct_site.details 'BINDING SITE FOR RESIDUE 0G6 A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 HIS A 42 ? HIS A 57 . ? 1_555 ? 2 AC1 22 GLN A 46 ? GLN A 61 . ? 1_555 ? 3 AC1 22 GLN A 61 ? GLN A 75 . ? 3_555 ? 4 AC1 22 GLU A 62 ? GLU A 76 . ? 3_555 ? 5 AC1 22 TYR A 85 ? TYR A 99 . ? 1_555 ? 6 AC1 22 MET A 102 ? MET A 116 . ? 3_555 ? 7 AC1 22 ASN A 103 ? ASN A 117 . ? 3_555 ? 8 AC1 22 LYS A 159 ? LYS A 175 . ? 1_555 ? 9 AC1 22 ASP A 175 ? ASP A 189 . ? 1_555 ? 10 AC1 22 SER A 176 ? SER A 190 . ? 1_555 ? 11 AC1 22 CYS A 177 ? CYS A 191 . ? 1_555 ? 12 AC1 22 GLN A 178 ? GLN A 192 . ? 1_555 ? 13 AC1 22 GLY A 179 ? GLY A 193 . ? 1_555 ? 14 AC1 22 SER A 181 ? SER A 195 . ? 1_555 ? 15 AC1 22 SER A 196 ? SER A 214 . ? 1_555 ? 16 AC1 22 TRP A 197 ? TRP A 215 . ? 1_555 ? 17 AC1 22 GLY A 198 ? GLY A 216 . ? 1_555 ? 18 AC1 22 GLY A 200 ? GLY A 219 . ? 1_555 ? 19 AC1 22 GLY A 208 ? GLY A 226 . ? 1_555 ? 20 AC1 22 HOH C . ? HOH A 247 . ? 1_555 ? 21 AC1 22 HOH C . ? HOH A 273 . ? 3_555 ? 22 AC1 22 HOH C . ? HOH A 327 . ? 1_555 ? # _database_PDB_matrix.entry_id 1FXY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1FXY _atom_sites.fract_transf_matrix[1][1] 0.015265 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006001 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020442 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014224 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 16 16 ILE ILE A . n A 1 2 VAL 2 17 17 VAL VAL A . n A 1 3 GLY 3 18 18 GLY GLY A . n A 1 4 GLY 4 19 19 GLY GLY A . n A 1 5 TYR 5 20 20 TYR TYR A . n A 1 6 ASN 6 21 21 ASN ASN A . n A 1 7 CYS 7 22 22 CYS CYS A . n A 1 8 LYS 8 23 23 LYS LYS A . n A 1 9 ASP 9 24 24 ASP ASP A . n A 1 10 GLY 10 25 25 GLY GLY A . n A 1 11 GLU 11 26 26 GLU GLU A . n A 1 12 VAL 12 27 27 VAL VAL A . n A 1 13 PRO 13 28 28 PRO PRO A . n A 1 14 TRP 14 29 29 TRP TRP A . n A 1 15 GLN 15 30 30 GLN GLN A . n A 1 16 ALA 16 31 31 ALA ALA A . n A 1 17 LEU 17 32 32 LEU LEU A . n A 1 18 LEU 18 33 33 LEU LEU A . n A 1 19 ILE 19 34 34 ILE ILE A . n A 1 20 ASN 20 35 35 ASN ASN A . n A 1 21 GLU 21 36 36 GLU GLU A . n A 1 22 GLU 22 37 37 GLU GLU A . n A 1 23 ASN 23 38 38 ASN ASN A . n A 1 24 GLU 24 39 39 GLU GLU A . n A 1 25 GLY 25 40 40 GLY GLY A . n A 1 26 PHE 26 41 41 PHE PHE A . n A 1 27 CYS 27 42 42 CYS CYS A . n A 1 28 GLY 28 43 43 GLY GLY A . n A 1 29 GLY 29 44 44 GLY GLY A . n A 1 30 THR 30 45 45 THR THR A . n A 1 31 ILE 31 46 46 ILE ILE A . n A 1 32 LEU 32 47 47 LEU LEU A . n A 1 33 SER 33 48 48 SER SER A . n A 1 34 GLU 34 49 49 GLU GLU A . n A 1 35 PHE 35 50 50 PHE PHE A . n A 1 36 TYR 36 51 51 TYR TYR A . n A 1 37 ILE 37 52 52 ILE ILE A . n A 1 38 LEU 38 53 53 LEU LEU A . n A 1 39 THR 39 54 54 THR THR A . n A 1 40 ALA 40 55 55 ALA ALA A . n A 1 41 ALA 41 56 56 ALA ALA A . n A 1 42 HIS 42 57 57 HIS HIS A . n A 1 43 CYS 43 58 58 CYS CYS A . n A 1 44 LEU 44 59 59 LEU LEU A . n A 1 45 TYR 45 60 60 TYR TYR A . n A 1 46 GLN 46 61 61 GLN GLN A . n A 1 47 ALA 47 61 61 ALA ALA A A n A 1 48 LYS 48 62 62 LYS LYS A . n A 1 49 ARG 49 63 63 ARG ARG A . n A 1 50 PHE 50 64 64 PHE PHE A . n A 1 51 LYS 51 65 65 LYS LYS A . n A 1 52 VAL 52 66 66 VAL VAL A . n A 1 53 ARG 53 67 67 ARG ARG A . n A 1 54 VAL 54 68 68 VAL VAL A . n A 1 55 GLY 55 69 69 GLY GLY A . n A 1 56 ASP 56 70 70 ASP ASP A . n A 1 57 ARG 57 71 71 ARG ARG A . n A 1 58 ASN 58 72 72 ASN ASN A . n A 1 59 THR 59 73 73 THR THR A . n A 1 60 GLU 60 74 74 GLU GLU A . n A 1 61 GLN 61 75 75 GLN GLN A . n A 1 62 GLU 62 76 76 GLU GLU A . n A 1 63 GLU 63 77 77 GLU GLU A . n A 1 64 GLY 64 78 78 GLY GLY A . n A 1 65 GLY 65 79 79 GLY GLY A . n A 1 66 GLU 66 80 80 GLU GLU A . n A 1 67 ALA 67 81 81 ALA ALA A . n A 1 68 VAL 68 82 82 VAL VAL A . n A 1 69 HIS 69 83 83 HIS HIS A . n A 1 70 GLU 70 84 84 GLU GLU A . n A 1 71 VAL 71 85 85 VAL VAL A . n A 1 72 GLU 72 86 86 GLU GLU A . n A 1 73 VAL 73 87 87 VAL VAL A . n A 1 74 VAL 74 88 88 VAL VAL A . n A 1 75 ILE 75 89 89 ILE ILE A . n A 1 76 LYS 76 90 90 LYS LYS A . n A 1 77 HIS 77 91 91 HIS HIS A . n A 1 78 ASN 78 92 92 ASN ASN A . n A 1 79 ARG 79 93 93 ARG ARG A . n A 1 80 PHE 80 94 94 PHE PHE A . n A 1 81 THR 81 95 95 THR THR A . n A 1 82 LYS 82 96 96 LYS LYS A . n A 1 83 GLU 83 97 97 GLU GLU A . n A 1 84 THR 84 98 98 THR THR A . n A 1 85 TYR 85 99 99 TYR TYR A . n A 1 86 ASP 86 100 100 ASP ASP A . n A 1 87 PHE 87 101 101 PHE PHE A . n A 1 88 ASP 88 102 102 ASP ASP A . n A 1 89 ILE 89 103 103 ILE ILE A . n A 1 90 ALA 90 104 104 ALA ALA A . n A 1 91 VAL 91 105 105 VAL VAL A . n A 1 92 LEU 92 106 106 LEU LEU A . n A 1 93 ARG 93 107 107 ARG ARG A . n A 1 94 LEU 94 108 108 LEU LEU A . n A 1 95 LYS 95 109 109 LYS LYS A . n A 1 96 THR 96 110 110 THR THR A . n A 1 97 PRO 97 111 111 PRO PRO A . n A 1 98 ILE 98 112 112 ILE ILE A . n A 1 99 THR 99 113 113 THR THR A . n A 1 100 PHE 100 114 114 PHE PHE A . n A 1 101 ARG 101 115 115 ARG ARG A . n A 1 102 MET 102 116 116 MET MET A . n A 1 103 ASN 103 117 117 ASN ASN A . n A 1 104 VAL 104 118 118 VAL VAL A . n A 1 105 ALA 105 119 119 ALA ALA A . n A 1 106 PRO 106 120 120 PRO PRO A . n A 1 107 ALA 107 121 121 ALA ALA A . n A 1 108 SER 108 122 122 SER SER A . n A 1 109 LEU 109 123 123 LEU LEU A . n A 1 110 PRO 110 124 124 PRO PRO A . n A 1 111 THR 111 125 125 THR THR A . n A 1 112 ALA 112 127 127 ALA ALA A . n A 1 113 PRO 113 128 128 PRO PRO A . n A 1 114 PRO 114 129 129 PRO PRO A . n A 1 115 ALA 115 130 130 ALA ALA A . n A 1 116 THR 116 132 132 THR THR A . n A 1 117 GLY 117 133 133 GLY GLY A . n A 1 118 THR 118 134 134 THR THR A . n A 1 119 LYS 119 135 135 LYS LYS A . n A 1 120 CYS 120 136 136 CYS CYS A . n A 1 121 LEU 121 137 137 LEU LEU A . n A 1 122 ILE 122 138 138 ILE ILE A . n A 1 123 SER 123 139 139 SER SER A . n A 1 124 GLY 124 140 140 GLY GLY A . n A 1 125 TRP 125 141 141 TRP TRP A . n A 1 126 GLY 126 142 142 GLY GLY A . n A 1 127 ASN 127 143 143 ASN ASN A . n A 1 128 THR 128 144 144 THR THR A . n A 1 129 ALA 129 145 145 ALA ALA A . n A 1 130 SER 130 146 146 SER SER A . n A 1 131 SER 131 147 147 SER SER A . n A 1 132 GLY 132 148 148 GLY GLY A . n A 1 133 ALA 133 149 149 ALA ALA A . n A 1 134 ASP 134 150 150 ASP ASP A . n A 1 135 TYR 135 151 151 TYR TYR A . n A 1 136 PRO 136 152 152 PRO PRO A . n A 1 137 ASP 137 153 153 ASP ASP A . n A 1 138 GLU 138 154 154 GLU GLU A . n A 1 139 LEU 139 155 155 LEU LEU A . n A 1 140 GLN 140 156 156 GLN GLN A . n A 1 141 CYS 141 157 157 CYS CYS A . n A 1 142 LEU 142 158 158 LEU LEU A . n A 1 143 ASP 143 159 159 ASP ASP A . n A 1 144 ALA 144 160 160 ALA ALA A . n A 1 145 PRO 145 161 161 PRO PRO A . n A 1 146 VAL 146 162 162 VAL VAL A . n A 1 147 LEU 147 163 163 LEU LEU A . n A 1 148 SER 148 164 164 SER SER A . n A 1 149 GLN 149 165 165 GLN GLN A . n A 1 150 ALA 150 166 166 ALA ALA A . n A 1 151 LYS 151 167 167 LYS LYS A . n A 1 152 CYS 152 168 168 CYS CYS A . n A 1 153 GLU 153 169 169 GLU GLU A . n A 1 154 ALA 154 170 170 ALA ALA A . n A 1 155 SER 155 171 171 SER SER A . n A 1 156 TYR 156 172 172 TYR TYR A . n A 1 157 PRO 157 173 173 PRO PRO A . n A 1 158 GLY 158 174 174 GLY GLY A . n A 1 159 LYS 159 175 175 LYS LYS A . n A 1 160 ILE 160 176 176 ILE ILE A . n A 1 161 THR 161 177 177 THR THR A . n A 1 162 SER 162 178 178 SER SER A . n A 1 163 ASN 163 179 179 ASN ASN A . n A 1 164 MET 164 180 180 MET MET A . n A 1 165 PHE 165 181 181 PHE PHE A . n A 1 166 CYS 166 182 182 CYS CYS A . n A 1 167 VAL 167 183 183 VAL VAL A . n A 1 168 GLY 168 183 183 GLY GLY A A n A 1 169 PHE 169 184 184 PHE PHE A . n A 1 170 LEU 170 185 185 LEU LEU A . n A 1 171 GLU 171 186 186 GLU GLU A . n A 1 172 GLY 172 187 187 GLY GLY A . n A 1 173 GLY 173 187 187 GLY GLY A A n A 1 174 LYS 174 188 188 LYS LYS A . n A 1 175 ASP 175 189 189 ASP ASP A . n A 1 176 SER 176 190 190 SER SER A . n A 1 177 CYS 177 191 191 CYS CYS A . n A 1 178 GLN 178 192 192 GLN GLN A . n A 1 179 GLY 179 193 193 GLY GLY A . n A 1 180 ASP 180 194 194 ASP ASP A . n A 1 181 SER 181 195 195 SER SER A . n A 1 182 GLY 182 196 196 GLY GLY A . n A 1 183 GLY 183 197 197 GLY GLY A . n A 1 184 PRO 184 198 198 PRO PRO A . n A 1 185 VAL 185 199 199 VAL VAL A . n A 1 186 VAL 186 200 200 VAL VAL A . n A 1 187 CYS 187 201 201 CYS CYS A . n A 1 188 ASN 188 202 202 ASN ASN A . n A 1 189 GLY 189 203 203 GLY GLY A . n A 1 190 GLN 190 204 204 GLN GLN A . n A 1 191 LEU 191 209 209 LEU LEU A . n A 1 192 GLN 192 210 210 GLN GLN A . n A 1 193 GLY 193 211 211 GLY GLY A . n A 1 194 VAL 194 212 212 VAL VAL A . n A 1 195 VAL 195 213 213 VAL VAL A . n A 1 196 SER 196 214 214 SER SER A . n A 1 197 TRP 197 215 215 TRP TRP A . n A 1 198 GLY 198 216 216 GLY GLY A . n A 1 199 ASP 199 217 217 ASP ASP A . n A 1 200 GLY 200 219 219 GLY GLY A . n A 1 201 CYS 201 220 220 CYS CYS A . n A 1 202 ALA 202 220 220 ALA ALA A A n A 1 203 GLN 203 221 221 GLN GLN A . n A 1 204 LYS 204 222 222 LYS LYS A . n A 1 205 ASN 205 223 223 ASN ASN A . n A 1 206 LYS 206 224 224 LYS LYS A . n A 1 207 PRO 207 225 225 PRO PRO A . n A 1 208 GLY 208 226 226 GLY GLY A . n A 1 209 VAL 209 227 227 VAL VAL A . n A 1 210 TYR 210 228 228 TYR TYR A . n A 1 211 THR 211 229 229 THR THR A . n A 1 212 LYS 212 230 230 LYS LYS A . n A 1 213 VAL 213 231 231 VAL VAL A . n A 1 214 TYR 214 232 232 TYR TYR A . n A 1 215 ASN 215 233 233 ASN ASN A . n A 1 216 TYR 216 234 234 TYR TYR A . n A 1 217 VAL 217 235 235 VAL VAL A . n A 1 218 LYS 218 236 236 LYS LYS A . n A 1 219 TRP 219 237 237 TRP TRP A . n A 1 220 ILE 220 238 238 ILE ILE A . n A 1 221 LYS 221 239 239 LYS LYS A . n A 1 222 ASN 222 240 240 ASN ASN A . n A 1 223 THR 223 241 241 THR THR A . n A 1 224 ILE 224 242 242 ILE ILE A . n A 1 225 ALA 225 243 243 ALA ALA A . n A 1 226 ALA 226 244 244 ALA ALA A . n A 1 227 ASN 227 245 245 ASN ASN A . n A 1 228 SER 228 246 246 SER SER A . n # _pdbx_molecule_features.prd_id PRD_000020 _pdbx_molecule_features.name D-Phe-Pro-Arg-CH2Cl _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000020 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 37.8735713851 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 70.3030540831 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-06-17 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2013-02-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 ROTAVATA 'data reduction' . ? 2 AGROVATA 'data reduction' . ? 3 X-PLOR 'model building' 3.8 ? 4 X-PLOR refinement 3.8 ? 5 CCP4 'data scaling' '(AGROVATA' ? 6 'ROTAVATA)' 'data scaling' . ? 7 X-PLOR phasing 3.8 ? 8 # _pdbx_entry_details.entry_id 1FXY _pdbx_entry_details.nonpolymer_details ;THE UNBOUND FORM OF THE INHIBITOR IS D-PHE-PRO-ARG-CHLOROMETHYLKETONE. UPON REACTION WITH PROTEIN IT FORMS TWO COVALENT BONDS: 1) A COVALENT BOND TO SER 195 FORMING A HEMIKETAL AR7 AND 2) A COVALENT BOND TO NE2 OF HIS 57 ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.sequence_details ;RESIDUES ARE NUMBERED ACCORDING TO THE CHYMOTRYPSIN NUMBERING SYSTEM. THE MOLECULE IS A CHIMERIC CONSTRUCT COMPOSED OF RESIDUES 16 - 121 FROM HUMAN COAGULATION FACTOR XA AND RESIDUES 122 - 246 FROM HUMAN TRYPSIN I. THE N-TERMINAL 15 RESIDUES WERE CLEAVED OFF PROTEOLYTICALLY. ; # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 214 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -123.22 _pdbx_validate_torsion.psi -69.23 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 23 ? NZ ? A LYS 8 NZ 2 1 Y 0 A ASP 24 ? CB ? A ASP 9 CB 3 1 Y 0 A ASP 24 ? CG ? A ASP 9 CG 4 1 Y 0 A ASP 24 ? OD1 ? A ASP 9 OD1 5 1 Y 0 A ASP 24 ? OD2 ? A ASP 9 OD2 6 1 Y 0 A GLU 36 ? CB ? A GLU 21 CB 7 1 Y 0 A GLU 36 ? CG ? A GLU 21 CG 8 1 Y 0 A GLU 36 ? CD ? A GLU 21 CD 9 1 Y 0 A GLU 36 ? OE1 ? A GLU 21 OE1 10 1 Y 0 A GLU 36 ? OE2 ? A GLU 21 OE2 11 1 Y 0 A GLU 37 ? CB ? A GLU 22 CB 12 1 Y 0 A GLU 37 ? CG ? A GLU 22 CG 13 1 Y 0 A GLU 37 ? CD ? A GLU 22 CD 14 1 Y 0 A GLU 37 ? OE1 ? A GLU 22 OE1 15 1 Y 0 A GLU 37 ? OE2 ? A GLU 22 OE2 16 1 Y 0 A ASN 38 ? CB ? A ASN 23 CB 17 1 Y 0 A ASN 38 ? CG ? A ASN 23 CG 18 1 Y 0 A ASN 38 ? OD1 ? A ASN 23 OD1 19 1 Y 0 A ASN 38 ? ND2 ? A ASN 23 ND2 20 1 Y 0 A LYS 62 ? CB ? A LYS 48 CB 21 1 Y 0 A LYS 62 ? CG ? A LYS 48 CG 22 1 Y 0 A LYS 62 ? CD ? A LYS 48 CD 23 1 Y 0 A LYS 62 ? CE ? A LYS 48 CE 24 1 Y 0 A LYS 62 ? NZ ? A LYS 48 NZ 25 1 Y 0 A ARG 63 ? NE ? A ARG 49 NE 26 1 Y 0 A ARG 63 ? CZ ? A ARG 49 CZ 27 1 Y 0 A ARG 63 ? NH1 ? A ARG 49 NH1 28 1 Y 0 A ARG 63 ? NH2 ? A ARG 49 NH2 29 1 Y 0 A ARG 71 ? CG ? A ARG 57 CG 30 1 Y 0 A ARG 71 ? CD ? A ARG 57 CD 31 1 Y 0 A ARG 71 ? NE ? A ARG 57 NE 32 1 Y 0 A ARG 71 ? CZ ? A ARG 57 CZ 33 1 Y 0 A ARG 71 ? NH1 ? A ARG 57 NH1 34 1 Y 0 A ARG 71 ? NH2 ? A ARG 57 NH2 35 1 Y 0 A GLU 74 ? CG ? A GLU 60 CG 36 1 Y 0 A GLU 74 ? CD ? A GLU 60 CD 37 1 Y 0 A GLU 74 ? OE1 ? A GLU 60 OE1 38 1 Y 0 A GLU 74 ? OE2 ? A GLU 60 OE2 39 1 Y 0 A GLN 75 ? CG ? A GLN 61 CG 40 1 Y 0 A GLN 75 ? CD ? A GLN 61 CD 41 1 Y 0 A GLN 75 ? OE1 ? A GLN 61 OE1 42 1 Y 0 A GLN 75 ? NE2 ? A GLN 61 NE2 43 1 Y 0 A GLU 77 ? CB ? A GLU 63 CB 44 1 Y 0 A GLU 77 ? CG ? A GLU 63 CG 45 1 Y 0 A GLU 77 ? CD ? A GLU 63 CD 46 1 Y 0 A GLU 77 ? OE1 ? A GLU 63 OE1 47 1 Y 0 A GLU 77 ? OE2 ? A GLU 63 OE2 48 1 Y 0 A LYS 90 ? NZ ? A LYS 76 NZ 49 1 Y 0 A LYS 96 ? CE ? A LYS 82 CE 50 1 Y 0 A LYS 96 ? NZ ? A LYS 82 NZ 51 1 Y 0 A LYS 109 ? CE ? A LYS 95 CE 52 1 Y 0 A LYS 109 ? NZ ? A LYS 95 NZ 53 1 Y 0 A THR 125 ? CG2 ? A THR 111 CG2 54 1 Y 0 A LYS 135 ? NZ ? A LYS 119 NZ 55 1 Y 0 A ASP 153 ? OD1 ? A ASP 137 OD1 56 1 Y 0 A ASP 153 ? OD2 ? A ASP 137 OD2 57 1 Y 0 A GLU 154 ? CG ? A GLU 138 CG 58 1 Y 0 A GLU 154 ? CD ? A GLU 138 CD 59 1 Y 0 A GLU 154 ? OE1 ? A GLU 138 OE1 60 1 Y 0 A GLU 154 ? OE2 ? A GLU 138 OE2 61 1 Y 0 A LYS 167 ? CE ? A LYS 151 CE 62 1 Y 0 A LYS 167 ? NZ ? A LYS 151 NZ 63 1 Y 0 A GLU 186 ? CG ? A GLU 171 CG 64 1 Y 0 A GLU 186 ? CD ? A GLU 171 CD 65 1 Y 0 A GLU 186 ? OE1 ? A GLU 171 OE1 66 1 Y 0 A GLU 186 ? OE2 ? A GLU 171 OE2 67 1 Y 0 A LYS 188 ? NZ ? A LYS 174 NZ 68 1 Y 0 A ASN 202 ? CG ? A ASN 188 CG 69 1 Y 0 A ASN 202 ? OD1 ? A ASN 188 OD1 70 1 Y 0 A ASN 202 ? ND2 ? A ASN 188 ND2 71 1 Y 0 A ASP 217 ? CB ? A ASP 199 CB 72 1 Y 0 A LYS 236 ? CE ? A LYS 218 CE 73 1 Y 0 A LYS 236 ? NZ ? A LYS 218 NZ # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 0 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id SER _pdbx_unobs_or_zero_occ_residues.auth_seq_id 246 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id SER _pdbx_unobs_or_zero_occ_residues.label_seq_id 228 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 0G6 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0G6 1 1 1 0G6 DPN A . C 3 HOH 1 247 1 HOH HOH A . C 3 HOH 2 248 2 HOH HOH A . C 3 HOH 3 249 3 HOH HOH A . C 3 HOH 4 250 4 HOH HOH A . C 3 HOH 5 251 5 HOH HOH A . C 3 HOH 6 252 6 HOH HOH A . C 3 HOH 7 253 7 HOH HOH A . C 3 HOH 8 254 8 HOH HOH A . C 3 HOH 9 255 9 HOH HOH A . C 3 HOH 10 256 10 HOH HOH A . C 3 HOH 11 257 11 HOH HOH A . C 3 HOH 12 258 12 HOH HOH A . C 3 HOH 13 259 13 HOH HOH A . C 3 HOH 14 260 14 HOH HOH A . C 3 HOH 15 261 15 HOH HOH A . C 3 HOH 16 262 16 HOH HOH A . C 3 HOH 17 263 17 HOH HOH A . C 3 HOH 18 264 18 HOH HOH A . C 3 HOH 19 265 19 HOH HOH A . C 3 HOH 20 266 20 HOH HOH A . C 3 HOH 21 267 21 HOH HOH A . C 3 HOH 22 268 22 HOH HOH A . C 3 HOH 23 269 23 HOH HOH A . C 3 HOH 24 270 24 HOH HOH A . C 3 HOH 25 271 25 HOH HOH A . C 3 HOH 26 272 26 HOH HOH A . C 3 HOH 27 273 27 HOH HOH A . C 3 HOH 28 274 28 HOH HOH A . C 3 HOH 29 275 29 HOH HOH A . C 3 HOH 30 276 30 HOH HOH A . C 3 HOH 31 277 31 HOH HOH A . C 3 HOH 32 278 32 HOH HOH A . C 3 HOH 33 279 33 HOH HOH A . C 3 HOH 34 280 34 HOH HOH A . C 3 HOH 35 281 35 HOH HOH A . C 3 HOH 36 282 36 HOH HOH A . C 3 HOH 37 283 37 HOH HOH A . C 3 HOH 38 284 38 HOH HOH A . C 3 HOH 39 285 39 HOH HOH A . C 3 HOH 40 286 40 HOH HOH A . C 3 HOH 41 287 41 HOH HOH A . C 3 HOH 42 288 42 HOH HOH A . C 3 HOH 43 289 45 HOH HOH A . C 3 HOH 44 290 47 HOH HOH A . C 3 HOH 45 291 49 HOH HOH A . C 3 HOH 46 292 51 HOH HOH A . C 3 HOH 47 293 53 HOH HOH A . C 3 HOH 48 294 54 HOH HOH A . C 3 HOH 49 295 55 HOH HOH A . C 3 HOH 50 296 56 HOH HOH A . C 3 HOH 51 297 57 HOH HOH A . C 3 HOH 52 298 58 HOH HOH A . C 3 HOH 53 299 59 HOH HOH A . C 3 HOH 54 300 60 HOH HOH A . C 3 HOH 55 301 61 HOH HOH A . C 3 HOH 56 302 62 HOH HOH A . C 3 HOH 57 303 64 HOH HOH A . C 3 HOH 58 304 65 HOH HOH A . C 3 HOH 59 305 66 HOH HOH A . C 3 HOH 60 306 69 HOH HOH A . C 3 HOH 61 307 71 HOH HOH A . C 3 HOH 62 308 72 HOH HOH A . C 3 HOH 63 309 76 HOH HOH A . C 3 HOH 64 310 77 HOH HOH A . C 3 HOH 65 311 79 HOH HOH A . C 3 HOH 66 312 81 HOH HOH A . C 3 HOH 67 313 82 HOH HOH A . C 3 HOH 68 314 83 HOH HOH A . C 3 HOH 69 315 85 HOH HOH A . C 3 HOH 70 316 86 HOH HOH A . C 3 HOH 71 317 89 HOH HOH A . C 3 HOH 72 318 90 HOH HOH A . C 3 HOH 73 319 91 HOH HOH A . C 3 HOH 74 320 92 HOH HOH A . C 3 HOH 75 321 94 HOH HOH A . C 3 HOH 76 322 95 HOH HOH A . C 3 HOH 77 323 97 HOH HOH A . C 3 HOH 78 324 98 HOH HOH A . C 3 HOH 79 325 99 HOH HOH A . C 3 HOH 80 326 100 HOH HOH A . C 3 HOH 81 327 101 HOH HOH A . C 3 HOH 82 328 102 HOH HOH A . #