data_1HAP # _entry.id 1HAP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1HAP RCSB PDE0118 WWPDB D_1000173750 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1HAO _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1HAP _pdbx_database_status.recvd_initial_deposition_date 1995-10-03 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Padmanabhan, K.' 1 'Tulinsky, A.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'An ambiguous structure of a DNA 15-mer thrombin complex.' 'Acta Crystallogr.,Sect.D' 52 272 282 1996 ABCRE6 DK 0907-4449 0766 ? 15299700 10.1107/S0907444995013977 1 'The Structure of Alpha-Thrombin Inhibited by a 15-mer Single-Stranded DNA Aptamer' J.Biol.Chem. 268 17651 17654 1993 JBCHA3 US 0021-9258 0071 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Padmanabhan, K.' 1 primary 'Tulinsky, A.' 2 1 'Padmanabhan, K.' 3 1 'Padmanabhan, K.P.' 4 1 'Ferrara, J.D.' 5 1 'Sadler, J.E.' 6 1 'Tulinsky, A.' 7 # _cell.entry_id 1HAP _cell.length_a 58.280 _cell.length_b 77.610 _cell.length_c 100.020 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1HAP _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3'" 4743.051 1 ? ? ? ? 2 polymer nat 'Thrombin light chain' 4096.534 1 3.4.21.5 ? 'residues 328-363' ? 3 polymer nat 'Thrombin heavy chain' 29780.219 1 3.4.21.5 ? 'residues 364-622' ? 4 non-polymer syn 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 453.986 1 ? ? ? ? 5 water nat water 18.015 151 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 2 'Coagulation factor II' 3 'Coagulation factor II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DG)(DT)(DT)(DG)(DG)(DT)(DG)(DT)(DG)(DG)(DT)(DT)(DG)(DG)' GGTTGGTGTGGTTGG D ? 2 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR L ? 3 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; H ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DT n 1 4 DT n 1 5 DG n 1 6 DG n 1 7 DT n 1 8 DG n 1 9 DT n 1 10 DG n 1 11 DG n 1 12 DT n 1 13 DT n 1 14 DG n 1 15 DG n 2 1 THR n 2 2 PHE n 2 3 GLY n 2 4 SER n 2 5 GLY n 2 6 GLU n 2 7 ALA n 2 8 ASP n 2 9 CYS n 2 10 GLY n 2 11 LEU n 2 12 ARG n 2 13 PRO n 2 14 LEU n 2 15 PHE n 2 16 GLU n 2 17 LYS n 2 18 LYS n 2 19 SER n 2 20 LEU n 2 21 GLU n 2 22 ASP n 2 23 LYS n 2 24 THR n 2 25 GLU n 2 26 ARG n 2 27 GLU n 2 28 LEU n 2 29 LEU n 2 30 GLU n 2 31 SER n 2 32 TYR n 2 33 ILE n 2 34 ASP n 2 35 GLY n 2 36 ARG n 3 1 ILE n 3 2 VAL n 3 3 GLU n 3 4 GLY n 3 5 SER n 3 6 ASP n 3 7 ALA n 3 8 GLU n 3 9 ILE n 3 10 GLY n 3 11 MET n 3 12 SER n 3 13 PRO n 3 14 TRP n 3 15 GLN n 3 16 VAL n 3 17 MET n 3 18 LEU n 3 19 PHE n 3 20 ARG n 3 21 LYS n 3 22 SER n 3 23 PRO n 3 24 GLN n 3 25 GLU n 3 26 LEU n 3 27 LEU n 3 28 CYS n 3 29 GLY n 3 30 ALA n 3 31 SER n 3 32 LEU n 3 33 ILE n 3 34 SER n 3 35 ASP n 3 36 ARG n 3 37 TRP n 3 38 VAL n 3 39 LEU n 3 40 THR n 3 41 ALA n 3 42 ALA n 3 43 HIS n 3 44 CYS n 3 45 LEU n 3 46 LEU n 3 47 TYR n 3 48 PRO n 3 49 PRO n 3 50 TRP n 3 51 ASP n 3 52 LYS n 3 53 ASN n 3 54 PHE n 3 55 THR n 3 56 GLU n 3 57 ASN n 3 58 ASP n 3 59 LEU n 3 60 LEU n 3 61 VAL n 3 62 ARG n 3 63 ILE n 3 64 GLY n 3 65 LYS n 3 66 HIS n 3 67 SER n 3 68 ARG n 3 69 THR n 3 70 ARG n 3 71 TYR n 3 72 GLU n 3 73 ARG n 3 74 ASN n 3 75 ILE n 3 76 GLU n 3 77 LYS n 3 78 ILE n 3 79 SER n 3 80 MET n 3 81 LEU n 3 82 GLU n 3 83 LYS n 3 84 ILE n 3 85 TYR n 3 86 ILE n 3 87 HIS n 3 88 PRO n 3 89 ARG n 3 90 TYR n 3 91 ASN n 3 92 TRP n 3 93 ARG n 3 94 GLU n 3 95 ASN n 3 96 LEU n 3 97 ASP n 3 98 ARG n 3 99 ASP n 3 100 ILE n 3 101 ALA n 3 102 LEU n 3 103 MET n 3 104 LYS n 3 105 LEU n 3 106 LYS n 3 107 LYS n 3 108 PRO n 3 109 VAL n 3 110 ALA n 3 111 PHE n 3 112 SER n 3 113 ASP n 3 114 TYR n 3 115 ILE n 3 116 HIS n 3 117 PRO n 3 118 VAL n 3 119 CYS n 3 120 LEU n 3 121 PRO n 3 122 ASP n 3 123 ARG n 3 124 GLU n 3 125 THR n 3 126 ALA n 3 127 ALA n 3 128 SER n 3 129 LEU n 3 130 LEU n 3 131 GLN n 3 132 ALA n 3 133 GLY n 3 134 TYR n 3 135 LYS n 3 136 GLY n 3 137 ARG n 3 138 VAL n 3 139 THR n 3 140 GLY n 3 141 TRP n 3 142 GLY n 3 143 ASN n 3 144 LEU n 3 145 LYS n 3 146 GLU n 3 147 THR n 3 148 TRP n 3 149 THR n 3 150 ALA n 3 151 ASN n 3 152 VAL n 3 153 GLY n 3 154 LYS n 3 155 GLY n 3 156 GLN n 3 157 PRO n 3 158 SER n 3 159 VAL n 3 160 LEU n 3 161 GLN n 3 162 VAL n 3 163 VAL n 3 164 ASN n 3 165 LEU n 3 166 PRO n 3 167 ILE n 3 168 VAL n 3 169 GLU n 3 170 ARG n 3 171 PRO n 3 172 VAL n 3 173 CYS n 3 174 LYS n 3 175 ASP n 3 176 SER n 3 177 THR n 3 178 ARG n 3 179 ILE n 3 180 ARG n 3 181 ILE n 3 182 THR n 3 183 ASP n 3 184 ASN n 3 185 MET n 3 186 PHE n 3 187 CYS n 3 188 ALA n 3 189 GLY n 3 190 TYR n 3 191 LYS n 3 192 PRO n 3 193 ASP n 3 194 GLU n 3 195 GLY n 3 196 LYS n 3 197 ARG n 3 198 GLY n 3 199 ASP n 3 200 ALA n 3 201 CYS n 3 202 GLU n 3 203 GLY n 3 204 ASP n 3 205 SER n 3 206 GLY n 3 207 GLY n 3 208 PRO n 3 209 PHE n 3 210 VAL n 3 211 MET n 3 212 LYS n 3 213 SER n 3 214 PRO n 3 215 PHE n 3 216 ASN n 3 217 ASN n 3 218 ARG n 3 219 TRP n 3 220 TYR n 3 221 GLN n 3 222 MET n 3 223 GLY n 3 224 ILE n 3 225 VAL n 3 226 SER n 3 227 TRP n 3 228 GLY n 3 229 GLU n 3 230 GLY n 3 231 CYS n 3 232 ASP n 3 233 ARG n 3 234 ASP n 3 235 GLY n 3 236 LYS n 3 237 TYR n 3 238 GLY n 3 239 PHE n 3 240 TYR n 3 241 THR n 3 242 HIS n 3 243 VAL n 3 244 PHE n 3 245 ARG n 3 246 LEU n 3 247 LYS n 3 248 LYS n 3 249 TRP n 3 250 ILE n 3 251 GLN n 3 252 LYS n 3 253 VAL n 3 254 ILE n 3 255 ASP n 3 256 GLN n 3 257 PHE n 3 258 GLY n 3 259 GLU n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 2 1 sample ? ? human 'Homo sapiens' 9606 Homo ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? human 'Homo sapiens' 9606 Homo ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN 2 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 P00734 ? 2 UNP THRB_HUMAN 3 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 P00734 ? 3 PDB 1HAP 1 GGTTGGTGTGGTTGG 1 1HAP ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1HAP L 7 B 33 K P00734 328 ? 363 ? 1 14 2 2 1HAP H 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 1HAP D 1 ? 15 ? 1HAP 401 ? 415 ? 401 415 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0G6 peptide-like . 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' PPACK 'C21 H34 Cl N6 O3 1' 453.986 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1HAP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.37 _exptl_crystal.density_Matthews 2.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _reflns.entry_id 1HAP _reflns.observed_criterion_sigma_I 1.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 15.000 _reflns.d_resolution_high 2.500 _reflns.number_obs 9225 _reflns.number_all ? _reflns.percent_possible_obs 57.000 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1HAP _refine.ls_number_reflns_obs 7717 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.000 _refine.ls_d_res_high 2.800 _refine.ls_percent_reflns_obs 68.000 _refine.ls_R_factor_obs 0.161 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2275 _refine_hist.pdbx_number_atoms_nucleic_acid 315 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 151 _refine_hist.number_atoms_total 2771 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 10.000 # _struct.entry_id 1HAP _struct.title 'COMPLEX OF HUMAN ALPHA-THROMBIN WITH A 15MER OLIGONUCLEOTIDE GGTTGGTGTGGTTGG (BASED ON X-RAY MODEL OF DNA)' _struct.pdbx_descriptor 'ALPHA-THROMBIN (E.C.3.4.21.5)/DNA COMPLEX + D-PHE-PRO-ARG-CHLOROMETHYLKETONE (PPACK)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1HAP _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR/DNA' _struct_keywords.text 'COAGULATION, QUADRUPLE HELIX, HYDROLASE-HYDROLASE INHIBITOR-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU B 25 C LEU B 29 G GLU L 14 LEU L 14 1 ? 5 HELX_P HELX_P2 2 PRO C 48 B TRP C 50 D PRO H 60 TRP H 60 5 ? 3 HELX_P HELX_P3 3 ARG C 123 ? LEU C 129 C ARG H 126 LEU H 129 1 ? 7 HELX_P HELX_P4 4 ARG C 170 ? ASP C 175 ? ARG H 165 ASP H 170 1 ? 6 HELX_P HELX_P5 5 PHE C 244 ? PHE C 257 ? PHE H 232 PHE H 245 5 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? B CYS 9 SG ? ? ? 1_555 C CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.009 ? disulf2 disulf ? ? C CYS 28 SG ? ? ? 1_555 C CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.087 ? disulf3 disulf ? ? C CYS 173 SG ? ? ? 1_555 C CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 1.998 ? disulf4 disulf ? ? C CYS 201 SG ? ? ? 1_555 C CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.038 ? covale1 covale ? ? C SER 205 OG ? ? ? 1_555 D 0G6 . C2 ? ? H SER 195 H 0G6 297 1_555 ? ? ? ? ? ? ? 1.848 ? covale2 covale ? ? C HIS 43 NE2 ? ? ? 1_555 D 0G6 . C3 ? ? H HIS 57 H 0G6 297 1_555 ? ? ? ? ? ? ? 1.940 ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DG 15 O6 ? ? D DG 401 D DG 415 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DG 15 N7 ? ? D DG 401 D DG 415 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 5 O6 ? ? D DG 402 D DG 405 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? hydrog4 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 14 N1 ? ? D DG 402 D DG 414 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? hydrog5 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 11 O6 ? ? D DG 405 D DG 411 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog6 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 11 N7 ? ? D DG 405 D DG 411 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog7 hydrog ? ? A DG 6 N7 ? ? ? 1_555 A DG 10 N2 ? ? D DG 406 D DG 410 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog8 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DG 10 N1 ? ? D DG 406 D DG 410 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog9 hydrog ? ? A DG 10 N7 ? ? ? 1_555 A DG 15 N1 ? ? D DG 410 D DG 415 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? hydrog10 hydrog ? ? A DG 11 N1 ? ? ? 1_555 A DG 14 O6 ? ? D DG 411 D DG 414 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog11 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DG 14 N7 ? ? D DG 411 D DG 414 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? C ? 2 ? D ? 2 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS C 77 ? SER C 79 ? LYS H 81 SER H 83 A 2 LEU C 59 ? ILE C 63 ? LEU H 64 ILE H 68 A 3 GLN C 15 ? ARG C 20 ? GLN H 30 ARG H 35 A 4 GLU C 25 ? SER C 31 ? GLU H 39 SER H 45 B 1 TRP C 37 ? THR C 40 ? TRP H 51 THR H 54 B 2 ALA C 101 ? LEU C 105 ? ALA H 104 LEU H 108 B 3 LEU C 81 ? ILE C 86 ? LEU H 85 ILE H 90 C 1 LYS C 135 ? THR C 139 ? LYS H 135 THR H 139 C 2 VAL C 162 ? PRO C 166 ? VAL H 157 PRO H 161 D 1 MET C 185 ? ALA C 188 ? MET H 180 ALA H 183 D 2 GLY C 238 ? THR C 241 ? GLY H 226 THR H 229 E 1 PRO C 208 ? SER C 213 ? PRO H 198 SER H 203 E 2 ARG C 218 ? ILE C 224 ? ARG H 206 ILE H 212 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LYS C 77 ? O LYS H 81 N ILE C 63 ? N ILE H 68 A 2 3 O LEU C 60 ? O LEU H 65 N PHE C 19 ? N PHE H 34 A 3 4 O VAL C 16 ? O VAL H 31 N ALA C 30 ? N ALA H 44 B 1 2 O VAL C 38 ? O VAL H 52 N MET C 103 ? N MET H 106 B 2 3 O LEU C 102 ? O LEU H 105 N TYR C 85 ? N TYR H 89 C 1 2 O GLY C 136 ? O GLY H 136 N LEU C 165 ? N LEU H 160 D 1 2 O PHE C 186 ? O PHE H 181 N TYR C 240 ? N TYR H 228 E 1 2 O PHE C 209 ? O PHE H 199 N GLY C 223 ? N GLY H 211 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 13 'BINDING SITE FOR RESIDUE 0G6 H 297' CAT Author ? ? ? ? 3 'CATALYTIC SITE' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 HIS C 43 ? HIS H 57 . ? 1_555 ? 2 AC1 13 TYR C 47 A TYR H 60 . ? 1_555 ? 3 AC1 13 TRP C 50 D TRP H 60 . ? 1_555 ? 4 AC1 13 LEU C 96 ? LEU H 99 . ? 1_555 ? 5 AC1 13 ASP C 199 ? ASP H 189 . ? 1_555 ? 6 AC1 13 ALA C 200 ? ALA H 190 . ? 1_555 ? 7 AC1 13 ASP C 204 ? ASP H 194 . ? 1_555 ? 8 AC1 13 SER C 205 ? SER H 195 . ? 1_555 ? 9 AC1 13 SER C 226 ? SER H 214 . ? 1_555 ? 10 AC1 13 TRP C 227 ? TRP H 215 . ? 1_555 ? 11 AC1 13 GLY C 228 ? GLY H 216 . ? 1_555 ? 12 AC1 13 GLY C 230 ? GLY H 219 . ? 1_555 ? 13 AC1 13 GLY C 238 ? GLY H 226 . ? 1_555 ? 14 CAT 3 HIS C 43 ? HIS H 57 . ? 1_555 ? 15 CAT 3 ASP C 99 ? ASP H 102 . ? 1_555 ? 16 CAT 3 SER C 205 ? SER H 195 . ? 1_555 ? # _database_PDB_matrix.entry_id 1HAP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1HAP _atom_sites.fract_transf_matrix[1][1] 0.017159 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012885 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009998 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 'THE BONDS OG SER H 195-C2 0G6 AND NE2 HIS H 57-C3 0G6 ARE OUTSIDE ACCEPTED RANGE' 2 'THE INTERACTIONS INVOLVING DT 407, DG 408, AND DT 413 ARE OUTSIDE ACCEPTED RANGE' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 401 401 DG DG D . n A 1 2 DG 2 402 402 DG DG D . n A 1 3 DT 3 403 403 DT DT D . n A 1 4 DT 4 404 404 DT DT D . n A 1 5 DG 5 405 405 DG DG D . n A 1 6 DG 6 406 406 DG DG D . n A 1 7 DT 7 407 407 DT DT D . n A 1 8 DG 8 408 408 DG DG D . n A 1 9 DT 9 409 409 DT DT D . n A 1 10 DG 10 410 410 DG DG D . n A 1 11 DG 11 411 411 DG DG D . n A 1 12 DT 12 412 412 DT DT D . n A 1 13 DT 13 413 413 DT DT D . n A 1 14 DG 14 414 414 DG DG D . n A 1 15 DG 15 415 415 DG DG D . n B 2 1 THR 1 -5 ? ? ? L . n B 2 2 PHE 2 -4 ? ? ? L . n B 2 3 GLY 3 -3 ? ? ? L . n B 2 4 SER 4 -2 ? ? ? L . n B 2 5 GLY 5 -1 ? ? ? L . n B 2 6 GLU 6 0 ? ? ? L . n B 2 7 ALA 7 1 1 ALA ALA L B n B 2 8 ASP 8 1 1 ASP ASP L A n B 2 9 CYS 9 1 1 CYS CYS L . n B 2 10 GLY 10 2 2 GLY GLY L . n B 2 11 LEU 11 3 3 LEU LEU L . n B 2 12 ARG 12 4 4 ARG ARG L . n B 2 13 PRO 13 5 5 PRO PRO L . n B 2 14 LEU 14 6 6 LEU LEU L . n B 2 15 PHE 15 7 7 PHE PHE L . n B 2 16 GLU 16 8 8 GLU GLU L . n B 2 17 LYS 17 9 9 LYS LYS L . n B 2 18 LYS 18 10 10 LYS LYS L . n B 2 19 SER 19 11 11 SER SER L . n B 2 20 LEU 20 12 12 LEU LEU L . n B 2 21 GLU 21 13 13 GLU GLU L . n B 2 22 ASP 22 14 14 ASP ASP L . n B 2 23 LYS 23 14 14 LYS LYS L A n B 2 24 THR 24 14 14 THR THR L B n B 2 25 GLU 25 14 14 GLU GLU L C n B 2 26 ARG 26 14 14 ARG ARG L D n B 2 27 GLU 27 14 14 GLU GLU L E n B 2 28 LEU 28 14 14 LEU LEU L F n B 2 29 LEU 29 14 14 LEU LEU L G n B 2 30 GLU 30 14 14 GLU GLU L H n B 2 31 SER 31 14 14 SER SER L I n B 2 32 TYR 32 14 14 TYR TYR L J n B 2 33 ILE 33 14 14 ILE ILE L K n B 2 34 ASP 34 15 ? ? ? L . n B 2 35 GLY 35 16 ? ? ? L . n B 2 36 ARG 36 17 ? ? ? L . n C 3 1 ILE 1 16 16 ILE ILE H . n C 3 2 VAL 2 17 17 VAL VAL H . n C 3 3 GLU 3 18 18 GLU GLU H . n C 3 4 GLY 4 19 19 GLY GLY H . n C 3 5 SER 5 20 20 SER SER H . n C 3 6 ASP 6 21 21 ASP ASP H . n C 3 7 ALA 7 22 22 ALA ALA H . n C 3 8 GLU 8 23 23 GLU GLU H . n C 3 9 ILE 9 24 24 ILE ILE H . n C 3 10 GLY 10 25 25 GLY GLY H . n C 3 11 MET 11 26 26 MET MET H . n C 3 12 SER 12 27 27 SER SER H . n C 3 13 PRO 13 28 28 PRO PRO H . n C 3 14 TRP 14 29 29 TRP TRP H . n C 3 15 GLN 15 30 30 GLN GLN H . n C 3 16 VAL 16 31 31 VAL VAL H . n C 3 17 MET 17 32 32 MET MET H . n C 3 18 LEU 18 33 33 LEU LEU H . n C 3 19 PHE 19 34 34 PHE PHE H . n C 3 20 ARG 20 35 35 ARG ARG H . n C 3 21 LYS 21 36 36 LYS LYS H . n C 3 22 SER 22 36 36 SER SER H A n C 3 23 PRO 23 37 37 PRO PRO H . n C 3 24 GLN 24 38 38 GLN GLN H . n C 3 25 GLU 25 39 39 GLU GLU H . n C 3 26 LEU 26 40 40 LEU LEU H . n C 3 27 LEU 27 41 41 LEU LEU H . n C 3 28 CYS 28 42 42 CYS CYS H . n C 3 29 GLY 29 43 43 GLY GLY H . n C 3 30 ALA 30 44 44 ALA ALA H . n C 3 31 SER 31 45 45 SER SER H . n C 3 32 LEU 32 46 46 LEU LEU H . n C 3 33 ILE 33 47 47 ILE ILE H . n C 3 34 SER 34 48 48 SER SER H . n C 3 35 ASP 35 49 49 ASP ASP H . n C 3 36 ARG 36 50 50 ARG ARG H . n C 3 37 TRP 37 51 51 TRP TRP H . n C 3 38 VAL 38 52 52 VAL VAL H . n C 3 39 LEU 39 53 53 LEU LEU H . n C 3 40 THR 40 54 54 THR THR H . n C 3 41 ALA 41 55 55 ALA ALA H . n C 3 42 ALA 42 56 56 ALA ALA H . n C 3 43 HIS 43 57 57 HIS HIS H . n C 3 44 CYS 44 58 58 CYS CYS H . n C 3 45 LEU 45 59 59 LEU LEU H . n C 3 46 LEU 46 60 60 LEU LEU H . n C 3 47 TYR 47 60 60 TYR TYR H A n C 3 48 PRO 48 60 60 PRO PRO H B n C 3 49 PRO 49 60 60 PRO PRO H C n C 3 50 TRP 50 60 60 TRP TRP H D n C 3 51 ASP 51 60 60 ASP ASP H E n C 3 52 LYS 52 60 60 LYS LYS H F n C 3 53 ASN 53 60 60 ASN ASN H G n C 3 54 PHE 54 60 60 PHE PHE H H n C 3 55 THR 55 60 60 THR THR H I n C 3 56 GLU 56 61 61 GLU GLU H . n C 3 57 ASN 57 62 62 ASN ASN H . n C 3 58 ASP 58 63 63 ASP ASP H . n C 3 59 LEU 59 64 64 LEU LEU H . n C 3 60 LEU 60 65 65 LEU LEU H . n C 3 61 VAL 61 66 66 VAL VAL H . n C 3 62 ARG 62 67 67 ARG ARG H . n C 3 63 ILE 63 68 68 ILE ILE H . n C 3 64 GLY 64 69 69 GLY GLY H . n C 3 65 LYS 65 70 70 LYS LYS H . n C 3 66 HIS 66 71 71 HIS HIS H . n C 3 67 SER 67 72 72 SER SER H . n C 3 68 ARG 68 73 73 ARG ARG H . n C 3 69 THR 69 74 74 THR THR H . n C 3 70 ARG 70 75 75 ARG ARG H . n C 3 71 TYR 71 76 76 TYR TYR H . n C 3 72 GLU 72 77 77 GLU GLU H . n C 3 73 ARG 73 77 77 ARG ARG H A n C 3 74 ASN 74 78 78 ASN ASN H . n C 3 75 ILE 75 79 79 ILE ILE H . n C 3 76 GLU 76 80 80 GLU GLU H . n C 3 77 LYS 77 81 81 LYS LYS H . n C 3 78 ILE 78 82 82 ILE ILE H . n C 3 79 SER 79 83 83 SER SER H . n C 3 80 MET 80 84 84 MET MET H . n C 3 81 LEU 81 85 85 LEU LEU H . n C 3 82 GLU 82 86 86 GLU GLU H . n C 3 83 LYS 83 87 87 LYS LYS H . n C 3 84 ILE 84 88 88 ILE ILE H . n C 3 85 TYR 85 89 89 TYR TYR H . n C 3 86 ILE 86 90 90 ILE ILE H . n C 3 87 HIS 87 91 91 HIS HIS H . n C 3 88 PRO 88 92 92 PRO PRO H . n C 3 89 ARG 89 93 93 ARG ARG H . n C 3 90 TYR 90 94 94 TYR TYR H . n C 3 91 ASN 91 95 95 ASN ASN H . n C 3 92 TRP 92 96 96 TRP TRP H . n C 3 93 ARG 93 97 97 ARG ARG H . n C 3 94 GLU 94 97 97 GLU GLU H A n C 3 95 ASN 95 98 98 ASN ASN H . n C 3 96 LEU 96 99 99 LEU LEU H . n C 3 97 ASP 97 100 100 ASP ASP H . n C 3 98 ARG 98 101 101 ARG ARG H . n C 3 99 ASP 99 102 102 ASP ASP H . n C 3 100 ILE 100 103 103 ILE ILE H . n C 3 101 ALA 101 104 104 ALA ALA H . n C 3 102 LEU 102 105 105 LEU LEU H . n C 3 103 MET 103 106 106 MET MET H . n C 3 104 LYS 104 107 107 LYS LYS H . n C 3 105 LEU 105 108 108 LEU LEU H . n C 3 106 LYS 106 109 109 LYS LYS H . n C 3 107 LYS 107 110 110 LYS LYS H . n C 3 108 PRO 108 111 111 PRO PRO H . n C 3 109 VAL 109 112 112 VAL VAL H . n C 3 110 ALA 110 113 113 ALA ALA H . n C 3 111 PHE 111 114 114 PHE PHE H . n C 3 112 SER 112 115 115 SER SER H . n C 3 113 ASP 113 116 116 ASP ASP H . n C 3 114 TYR 114 117 117 TYR TYR H . n C 3 115 ILE 115 118 118 ILE ILE H . n C 3 116 HIS 116 119 119 HIS HIS H . n C 3 117 PRO 117 120 120 PRO PRO H . n C 3 118 VAL 118 121 121 VAL VAL H . n C 3 119 CYS 119 122 122 CYS CYS H . n C 3 120 LEU 120 123 123 LEU LEU H . n C 3 121 PRO 121 124 124 PRO PRO H . n C 3 122 ASP 122 125 125 ASP ASP H . n C 3 123 ARG 123 126 126 ARG ARG H . n C 3 124 GLU 124 127 127 GLU GLU H . n C 3 125 THR 125 128 128 THR THR H . n C 3 126 ALA 126 129 129 ALA ALA H . n C 3 127 ALA 127 129 129 ALA ALA H A n C 3 128 SER 128 129 129 SER SER H B n C 3 129 LEU 129 129 129 LEU LEU H C n C 3 130 LEU 130 130 130 LEU LEU H . n C 3 131 GLN 131 131 131 GLN GLN H . n C 3 132 ALA 132 132 132 ALA ALA H . n C 3 133 GLY 133 133 133 GLY GLY H . n C 3 134 TYR 134 134 134 TYR TYR H . n C 3 135 LYS 135 135 135 LYS LYS H . n C 3 136 GLY 136 136 136 GLY GLY H . n C 3 137 ARG 137 137 137 ARG ARG H . n C 3 138 VAL 138 138 138 VAL VAL H . n C 3 139 THR 139 139 139 THR THR H . n C 3 140 GLY 140 140 140 GLY GLY H . n C 3 141 TRP 141 141 141 TRP TRP H . n C 3 142 GLY 142 142 142 GLY GLY H . n C 3 143 ASN 143 143 143 ASN ASN H . n C 3 144 LEU 144 144 144 LEU LEU H . n C 3 145 LYS 145 145 145 LYS LYS H . n C 3 146 GLU 146 146 146 GLU GLU H . n C 3 147 THR 147 147 147 THR THR H . n C 3 148 TRP 148 148 148 TRP TRP H . n C 3 149 THR 149 148 ? ? ? H A n C 3 150 ALA 150 148 ? ? ? H B n C 3 151 ASN 151 148 ? ? ? H C n C 3 152 VAL 152 148 ? ? ? H D n C 3 153 GLY 153 148 ? ? ? H E n C 3 154 LYS 154 148 ? ? ? H F n C 3 155 GLY 155 150 150 GLY GLY H . n C 3 156 GLN 156 151 151 GLN GLN H . n C 3 157 PRO 157 152 152 PRO PRO H . n C 3 158 SER 158 153 153 SER SER H . n C 3 159 VAL 159 154 154 VAL VAL H . n C 3 160 LEU 160 155 155 LEU LEU H . n C 3 161 GLN 161 156 156 GLN GLN H . n C 3 162 VAL 162 157 157 VAL VAL H . n C 3 163 VAL 163 158 158 VAL VAL H . n C 3 164 ASN 164 159 159 ASN ASN H . n C 3 165 LEU 165 160 160 LEU LEU H . n C 3 166 PRO 166 161 161 PRO PRO H . n C 3 167 ILE 167 162 162 ILE ILE H . n C 3 168 VAL 168 163 163 VAL VAL H . n C 3 169 GLU 169 164 164 GLU GLU H . n C 3 170 ARG 170 165 165 ARG ARG H . n C 3 171 PRO 171 166 166 PRO PRO H . n C 3 172 VAL 172 167 167 VAL VAL H . n C 3 173 CYS 173 168 168 CYS CYS H . n C 3 174 LYS 174 169 169 LYS LYS H . n C 3 175 ASP 175 170 170 ASP ASP H . n C 3 176 SER 176 171 171 SER SER H . n C 3 177 THR 177 172 172 THR THR H . n C 3 178 ARG 178 173 173 ARG ARG H . n C 3 179 ILE 179 174 174 ILE ILE H . n C 3 180 ARG 180 175 175 ARG ARG H . n C 3 181 ILE 181 176 176 ILE ILE H . n C 3 182 THR 182 177 177 THR THR H . n C 3 183 ASP 183 178 178 ASP ASP H . n C 3 184 ASN 184 179 179 ASN ASN H . n C 3 185 MET 185 180 180 MET MET H . n C 3 186 PHE 186 181 181 PHE PHE H . n C 3 187 CYS 187 182 182 CYS CYS H . n C 3 188 ALA 188 183 183 ALA ALA H . n C 3 189 GLY 189 184 184 GLY GLY H . n C 3 190 TYR 190 184 184 TYR TYR H A n C 3 191 LYS 191 185 185 LYS LYS H . n C 3 192 PRO 192 186 186 PRO PRO H . n C 3 193 ASP 193 186 186 ASP ASP H A n C 3 194 GLU 194 186 186 GLU GLU H B n C 3 195 GLY 195 186 186 GLY GLY H C n C 3 196 LYS 196 186 186 LYS LYS H D n C 3 197 ARG 197 187 187 ARG ARG H . n C 3 198 GLY 198 188 188 GLY GLY H . n C 3 199 ASP 199 189 189 ASP ASP H . n C 3 200 ALA 200 190 190 ALA ALA H . n C 3 201 CYS 201 191 191 CYS CYS H . n C 3 202 GLU 202 192 192 GLU GLU H . n C 3 203 GLY 203 193 193 GLY GLY H . n C 3 204 ASP 204 194 194 ASP ASP H . n C 3 205 SER 205 195 195 SER SER H . n C 3 206 GLY 206 196 196 GLY GLY H . n C 3 207 GLY 207 197 197 GLY GLY H . n C 3 208 PRO 208 198 198 PRO PRO H . n C 3 209 PHE 209 199 199 PHE PHE H . n C 3 210 VAL 210 200 200 VAL VAL H . n C 3 211 MET 211 201 201 MET MET H . n C 3 212 LYS 212 202 202 LYS LYS H . n C 3 213 SER 213 203 203 SER SER H . n C 3 214 PRO 214 204 204 PRO PRO H . n C 3 215 PHE 215 204 204 PHE PHE H A n C 3 216 ASN 216 204 204 ASN ASN H B n C 3 217 ASN 217 205 205 ASN ASN H . n C 3 218 ARG 218 206 206 ARG ARG H . n C 3 219 TRP 219 207 207 TRP TRP H . n C 3 220 TYR 220 208 208 TYR TYR H . n C 3 221 GLN 221 209 209 GLN GLN H . n C 3 222 MET 222 210 210 MET MET H . n C 3 223 GLY 223 211 211 GLY GLY H . n C 3 224 ILE 224 212 212 ILE ILE H . n C 3 225 VAL 225 213 213 VAL VAL H . n C 3 226 SER 226 214 214 SER SER H . n C 3 227 TRP 227 215 215 TRP TRP H . n C 3 228 GLY 228 216 216 GLY GLY H . n C 3 229 GLU 229 217 217 GLU GLU H . n C 3 230 GLY 230 219 219 GLY GLY H . n C 3 231 CYS 231 220 220 CYS CYS H . n C 3 232 ASP 232 221 221 ASP ASP H . n C 3 233 ARG 233 221 221 ARG ARG H A n C 3 234 ASP 234 222 222 ASP ASP H . n C 3 235 GLY 235 223 223 GLY GLY H . n C 3 236 LYS 236 224 224 LYS LYS H . n C 3 237 TYR 237 225 225 TYR TYR H . n C 3 238 GLY 238 226 226 GLY GLY H . n C 3 239 PHE 239 227 227 PHE PHE H . n C 3 240 TYR 240 228 228 TYR TYR H . n C 3 241 THR 241 229 229 THR THR H . n C 3 242 HIS 242 230 230 HIS HIS H . n C 3 243 VAL 243 231 231 VAL VAL H . n C 3 244 PHE 244 232 232 PHE PHE H . n C 3 245 ARG 245 233 233 ARG ARG H . n C 3 246 LEU 246 234 234 LEU LEU H . n C 3 247 LYS 247 235 235 LYS LYS H . n C 3 248 LYS 248 236 236 LYS LYS H . n C 3 249 TRP 249 237 237 TRP TRP H . n C 3 250 ILE 250 238 238 ILE ILE H . n C 3 251 GLN 251 239 239 GLN GLN H . n C 3 252 LYS 252 240 240 LYS LYS H . n C 3 253 VAL 253 241 241 VAL VAL H . n C 3 254 ILE 254 242 242 ILE ILE H . n C 3 255 ASP 255 243 243 ASP ASP H . n C 3 256 GLN 256 244 244 GLN GLN H . n C 3 257 PHE 257 245 245 PHE PHE H . n C 3 258 GLY 258 246 246 GLY GLY H . n C 3 259 GLU 259 247 247 GLU GLU H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 0G6 1 297 297 0G6 DPN H . E 5 HOH 1 575 575 HOH HOH D . E 5 HOH 2 626 626 HOH HOH D . E 5 HOH 3 627 627 HOH HOH D . E 5 HOH 4 631 631 HOH HOH D . E 5 HOH 5 638 638 HOH HOH D . E 5 HOH 6 649 649 HOH HOH D . E 5 HOH 7 656 656 HOH HOH D . E 5 HOH 8 663 663 HOH HOH D . E 5 HOH 9 666 666 HOH HOH D . E 5 HOH 10 672 672 HOH HOH D . E 5 HOH 11 673 673 HOH HOH D . E 5 HOH 12 679 679 HOH HOH D . E 5 HOH 13 681 681 HOH HOH D . E 5 HOH 14 688 688 HOH HOH D . E 5 HOH 15 698 698 HOH HOH D . E 5 HOH 16 702 702 HOH HOH D . F 5 HOH 1 516 516 HOH HOH L . F 5 HOH 2 528 528 HOH HOH L . F 5 HOH 3 569 569 HOH HOH L . F 5 HOH 4 609 609 HOH HOH L . F 5 HOH 5 624 624 HOH HOH L . F 5 HOH 6 632 632 HOH HOH L . F 5 HOH 7 635 635 HOH HOH L . F 5 HOH 8 660 660 HOH HOH L . F 5 HOH 9 668 668 HOH HOH L . F 5 HOH 10 687 687 HOH HOH L . G 5 HOH 1 503 503 HOH HOH H . G 5 HOH 2 507 507 HOH HOH H . G 5 HOH 3 509 509 HOH HOH H . G 5 HOH 4 510 510 HOH HOH H . G 5 HOH 5 511 511 HOH HOH H . G 5 HOH 6 512 512 HOH HOH H . G 5 HOH 7 514 514 HOH HOH H . G 5 HOH 8 515 515 HOH HOH H . G 5 HOH 9 519 519 HOH HOH H . G 5 HOH 10 520 520 HOH HOH H . G 5 HOH 11 524 524 HOH HOH H . G 5 HOH 12 525 525 HOH HOH H . G 5 HOH 13 527 527 HOH HOH H . G 5 HOH 14 529 529 HOH HOH H . G 5 HOH 15 531 531 HOH HOH H . G 5 HOH 16 534 534 HOH HOH H . G 5 HOH 17 535 535 HOH HOH H . G 5 HOH 18 536 536 HOH HOH H . G 5 HOH 19 537 537 HOH HOH H . G 5 HOH 20 539 539 HOH HOH H . G 5 HOH 21 540 540 HOH HOH H . G 5 HOH 22 541 541 HOH HOH H . G 5 HOH 23 542 542 HOH HOH H . G 5 HOH 24 543 543 HOH HOH H . G 5 HOH 25 544 544 HOH HOH H . G 5 HOH 26 549 549 HOH HOH H . G 5 HOH 27 550 550 HOH HOH H . G 5 HOH 28 552 552 HOH HOH H . G 5 HOH 29 554 554 HOH HOH H . G 5 HOH 30 556 556 HOH HOH H . G 5 HOH 31 559 559 HOH HOH H . G 5 HOH 32 560 560 HOH HOH H . G 5 HOH 33 561 561 HOH HOH H . G 5 HOH 34 562 562 HOH HOH H . G 5 HOH 35 564 564 HOH HOH H . G 5 HOH 36 567 567 HOH HOH H . G 5 HOH 37 570 570 HOH HOH H . G 5 HOH 38 574 574 HOH HOH H . G 5 HOH 39 577 577 HOH HOH H . G 5 HOH 40 579 579 HOH HOH H . G 5 HOH 41 581 581 HOH HOH H . G 5 HOH 42 582 582 HOH HOH H . G 5 HOH 43 585 585 HOH HOH H . G 5 HOH 44 586 586 HOH HOH H . G 5 HOH 45 587 587 HOH HOH H . G 5 HOH 46 589 589 HOH HOH H . G 5 HOH 47 590 590 HOH HOH H . G 5 HOH 48 594 594 HOH HOH H . G 5 HOH 49 596 596 HOH HOH H . G 5 HOH 50 597 597 HOH HOH H . G 5 HOH 51 598 598 HOH HOH H . G 5 HOH 52 599 599 HOH HOH H . G 5 HOH 53 600 600 HOH HOH H . G 5 HOH 54 601 601 HOH HOH H . G 5 HOH 55 602 602 HOH HOH H . G 5 HOH 56 603 603 HOH HOH H . G 5 HOH 57 604 604 HOH HOH H . G 5 HOH 58 606 606 HOH HOH H . G 5 HOH 59 607 607 HOH HOH H . G 5 HOH 60 608 608 HOH HOH H . G 5 HOH 61 610 610 HOH HOH H . G 5 HOH 62 611 611 HOH HOH H . G 5 HOH 63 619 619 HOH HOH H . G 5 HOH 64 621 621 HOH HOH H . G 5 HOH 65 622 622 HOH HOH H . G 5 HOH 66 623 623 HOH HOH H . G 5 HOH 67 625 625 HOH HOH H . G 5 HOH 68 628 628 HOH HOH H . G 5 HOH 69 629 629 HOH HOH H . G 5 HOH 70 630 630 HOH HOH H . G 5 HOH 71 633 633 HOH HOH H . G 5 HOH 72 634 634 HOH HOH H . G 5 HOH 73 636 636 HOH HOH H . G 5 HOH 74 637 637 HOH HOH H . G 5 HOH 75 639 639 HOH HOH H . G 5 HOH 76 640 640 HOH HOH H . G 5 HOH 77 641 641 HOH HOH H . G 5 HOH 78 642 642 HOH HOH H . G 5 HOH 79 643 643 HOH HOH H . G 5 HOH 80 644 644 HOH HOH H . G 5 HOH 81 645 645 HOH HOH H . G 5 HOH 82 646 646 HOH HOH H . G 5 HOH 83 647 647 HOH HOH H . G 5 HOH 84 648 648 HOH HOH H . G 5 HOH 85 650 650 HOH HOH H . G 5 HOH 86 651 651 HOH HOH H . G 5 HOH 87 652 652 HOH HOH H . G 5 HOH 88 653 653 HOH HOH H . G 5 HOH 89 655 655 HOH HOH H . G 5 HOH 90 657 657 HOH HOH H . G 5 HOH 91 658 658 HOH HOH H . G 5 HOH 92 659 659 HOH HOH H . G 5 HOH 93 661 661 HOH HOH H . G 5 HOH 94 662 662 HOH HOH H . G 5 HOH 95 664 664 HOH HOH H . G 5 HOH 96 665 665 HOH HOH H . G 5 HOH 97 667 667 HOH HOH H . G 5 HOH 98 669 669 HOH HOH H . G 5 HOH 99 670 670 HOH HOH H . G 5 HOH 100 671 671 HOH HOH H . G 5 HOH 101 674 674 HOH HOH H . G 5 HOH 102 675 675 HOH HOH H . G 5 HOH 103 676 676 HOH HOH H . G 5 HOH 104 677 677 HOH HOH H . G 5 HOH 105 678 678 HOH HOH H . G 5 HOH 106 680 680 HOH HOH H . G 5 HOH 107 682 682 HOH HOH H . G 5 HOH 108 683 683 HOH HOH H . G 5 HOH 109 684 684 HOH HOH H . G 5 HOH 110 685 685 HOH HOH H . G 5 HOH 111 686 686 HOH HOH H . G 5 HOH 112 689 689 HOH HOH H . G 5 HOH 113 690 690 HOH HOH H . G 5 HOH 114 691 691 HOH HOH H . G 5 HOH 115 692 692 HOH HOH H . G 5 HOH 116 693 693 HOH HOH H . G 5 HOH 117 694 694 HOH HOH H . G 5 HOH 118 695 695 HOH HOH H . G 5 HOH 119 696 696 HOH HOH H . G 5 HOH 120 697 697 HOH HOH H . G 5 HOH 121 699 699 HOH HOH H . G 5 HOH 122 700 700 HOH HOH H . G 5 HOH 123 701 701 HOH HOH H . G 5 HOH 124 703 703 HOH HOH H . G 5 HOH 125 704 704 HOH HOH H . # _pdbx_molecule_features.prd_id PRD_000020 _pdbx_molecule_features.name D-Phe-Pro-Arg-CH2Cl _pdbx_molecule_features.type Peptide-like _pdbx_molecule_features.class Inhibitor _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000020 _pdbx_molecule.asym_id D # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1996-04-03 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2013-02-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal NUCLIN refinement . ? 1 PROLSQ refinement . ? 2 # _pdbx_entry_details.entry_id 1HAP _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;THE INHIBITOR IS BOUND TO THE ACTIVE SITE OF THE ENZYME. THE UNBOUND FORM OF THE INHIBITOR IS D-PHE-PRO-ARG-CHLOROMETHYLKETONE. UPON REACTION WITH PROTEIN IT FORMS TWO COVALENT BONDS: 1) A COVALENT BOND TO SER 195 FORMING A HEMIKETAL AR7 AND 2) A COVALENT BOND TO NE2 OF HIS 57 ; _pdbx_entry_details.sequence_details ;CHYMOTRYPSIN NUMBERING SYSTEM IS USED FOR THROMBIN, BASED ON THE TOPOLOGICAL ALIGNMENT WITH THE STRUCTURE OF CHYMOTRYPSIN (BODE, W., ET AL., 1989, EMBO J. 8, 3467 - 3475). ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 C7 D DT 407 ? ? CG2 H ILE 24 ? ? 0.93 2 1 "O4'" D DG 408 ? ? NH2 H ARG 75 ? ? 1.24 3 1 "C4'" D DG 408 ? ? NH2 H ARG 75 ? ? 1.49 4 1 "C2'" D DG 408 ? ? NH2 H ARG 75 ? ? 1.62 5 1 "C1'" D DG 408 ? ? NH2 H ARG 75 ? ? 1.66 6 1 C8 D DG 408 ? ? NE H ARG 75 ? ? 1.71 7 1 C7 D DT 407 ? ? CB H ILE 24 ? ? 1.74 8 1 OG H SER 195 ? ? O2 H 0G6 297 ? ? 1.89 9 1 OE2 L GLU 8 ? ? NZ H LYS 202 ? ? 1.90 10 1 C5 D DT 407 ? ? CG2 H ILE 24 ? ? 1.92 11 1 "C3'" D DG 408 ? ? NH2 H ARG 75 ? ? 1.95 12 1 N2 D DG 402 ? ? N7 D DG 405 ? ? 1.96 13 1 "C5'" D DG 408 ? ? NH1 H ARG 75 ? ? 1.97 14 1 "C5'" D DG 408 ? ? NH2 H ARG 75 ? ? 2.01 15 1 O6 D DG 402 ? ? N1 D DG 414 ? ? 2.04 16 1 CB H SER 195 ? ? O2 H 0G6 297 ? ? 2.04 17 1 OD2 H ASP 49 ? ? OE2 H GLU 247 ? ? 2.05 18 1 NE1 H TRP 51 ? ? N H GLU 247 ? ? 2.05 19 1 "O5'" D DT 407 ? ? O4 D DT 409 ? ? 2.05 20 1 O H MET 84 ? ? N H LYS 109 ? ? 2.07 21 1 "O4'" D DT 407 ? ? N3 D DT 409 ? ? 2.09 22 1 "O4'" D DG 408 ? ? CZ H ARG 75 ? ? 2.10 23 1 OG1 H THR 172 ? ? N H ILE 174 ? ? 2.15 24 1 N H CYS 191 ? ? OD2 H ASP 194 ? ? 2.18 25 1 N H HIS 71 ? ? OE2 H GLU 77 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OP2 D DT 413 ? ? 1_555 NH1 H ARG 101 ? ? 2_564 1.15 2 1 P D DT 413 ? ? 1_555 NH1 H ARG 101 ? ? 2_564 1.50 3 1 "C5'" D DT 413 ? ? 1_555 NE H ARG 101 ? ? 2_564 1.58 4 1 "O5'" D DT 413 ? ? 1_555 NH1 H ARG 101 ? ? 2_564 1.72 5 1 "C5'" D DT 413 ? ? 1_555 CZ H ARG 101 ? ? 2_564 1.80 6 1 "C5'" D DT 413 ? ? 1_555 CD H ARG 101 ? ? 2_564 1.84 7 1 "O5'" D DT 413 ? ? 1_555 CZ H ARG 101 ? ? 2_564 2.08 8 1 "C5'" D DT 413 ? ? 1_555 NH1 H ARG 101 ? ? 2_564 2.15 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 401 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 401 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.491 _pdbx_validate_rmsd_bond.bond_target_value 1.420 _pdbx_validate_rmsd_bond.bond_deviation 0.071 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.011 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" D DG 401 ? ? "C5'" D DG 401 ? ? "C4'" D DG 401 ? ? 128.33 111.00 17.33 2.50 N 2 1 "O4'" D DG 401 ? ? "C4'" D DG 401 ? ? "C3'" D DG 401 ? ? 99.57 104.50 -4.93 0.40 N 3 1 "O5'" D DG 402 ? ? "C5'" D DG 402 ? ? "C4'" D DG 402 ? ? 99.58 109.40 -9.82 0.80 N 4 1 P D DG 402 ? ? "O5'" D DG 402 ? ? "C5'" D DG 402 ? ? 109.71 120.90 -11.19 1.60 N 5 1 "C1'" D DG 402 ? ? "O4'" D DG 402 ? ? "C4'" D DG 402 ? ? 103.82 110.10 -6.28 1.00 N 6 1 C5 D DG 402 ? ? C6 D DG 402 ? ? N1 D DG 402 ? ? 114.95 111.50 3.45 0.50 N 7 1 P D DT 403 ? ? "O5'" D DT 403 ? ? "C5'" D DT 403 ? ? 130.53 120.90 9.63 1.60 N 8 1 "C4'" D DT 403 ? ? "C3'" D DT 403 ? ? "O3'" D DT 403 ? ? 125.82 112.30 13.52 2.00 N 9 1 "C4'" D DT 403 ? ? "C3'" D DT 403 ? ? "C2'" D DT 403 ? ? 97.41 102.20 -4.79 0.70 N 10 1 "O4'" D DT 403 ? ? "C1'" D DT 403 ? ? N1 D DT 403 ? ? 110.76 108.30 2.46 0.30 N 11 1 C2 D DT 403 ? ? N3 D DT 403 ? ? C4 D DT 403 ? ? 122.61 127.20 -4.59 0.60 N 12 1 N3 D DT 403 ? ? C4 D DT 403 ? ? C5 D DT 403 ? ? 118.88 115.20 3.68 0.60 N 13 1 "C3'" D DT 403 ? ? "O3'" D DT 403 ? ? P D DT 404 ? ? 128.17 119.70 8.47 1.20 Y 14 1 "O3'" D DT 403 ? ? P D DT 404 ? ? "O5'" D DT 404 ? ? 120.16 104.00 16.16 1.90 Y 15 1 "C5'" D DT 404 ? ? "C4'" D DT 404 ? ? "C3'" D DT 404 ? ? 131.94 115.70 16.24 1.20 N 16 1 "C5'" D DT 404 ? ? "C4'" D DT 404 ? ? "O4'" D DT 404 ? ? 92.20 109.30 -17.10 1.90 N 17 1 "C1'" D DT 404 ? ? "O4'" D DT 404 ? ? "C4'" D DT 404 ? ? 103.46 110.10 -6.64 1.00 N 18 1 "C4'" D DT 404 ? ? "C3'" D DT 404 ? ? "O3'" D DT 404 ? ? 125.50 112.30 13.20 2.00 N 19 1 "O4'" D DT 404 ? ? "C1'" D DT 404 ? ? N1 D DT 404 ? ? 111.74 108.30 3.44 0.30 N 20 1 C2 D DT 404 ? ? N3 D DT 404 ? ? C4 D DT 404 ? ? 121.58 127.20 -5.62 0.60 N 21 1 N3 D DT 404 ? ? C4 D DT 404 ? ? C5 D DT 404 ? ? 120.04 115.20 4.84 0.60 N 22 1 N3 D DT 404 ? ? C2 D DT 404 ? ? O2 D DT 404 ? ? 116.04 122.30 -6.26 0.60 N 23 1 N3 D DT 404 ? ? C4 D DT 404 ? ? O4 D DT 404 ? ? 115.53 119.90 -4.37 0.60 N 24 1 "C3'" D DT 404 ? ? "O3'" D DT 404 ? ? P D DG 405 ? ? 151.78 119.70 32.08 1.20 Y 25 1 "O3'" D DT 404 ? ? P D DG 405 ? ? OP2 D DG 405 ? ? 117.82 110.50 7.32 1.10 Y 26 1 OP1 D DG 405 ? ? P D DG 405 ? ? OP2 D DG 405 ? ? 109.38 119.60 -10.22 1.50 N 27 1 "C3'" D DG 405 ? ? "C2'" D DG 405 ? ? "C1'" D DG 405 ? ? 95.67 102.40 -6.73 0.80 N 28 1 "C3'" D DG 405 ? ? "O3'" D DG 405 ? ? P D DG 406 ? ? 142.72 119.70 23.02 1.20 Y 29 1 OP1 D DG 406 ? ? P D DG 406 ? ? OP2 D DG 406 ? ? 108.99 119.60 -10.61 1.50 N 30 1 "C3'" D DG 406 ? ? "C2'" D DG 406 ? ? "C1'" D DG 406 ? ? 93.61 102.40 -8.79 0.80 N 31 1 "O4'" D DG 406 ? ? "C1'" D DG 406 ? ? N9 D DG 406 ? ? 120.02 108.30 11.72 0.30 N 32 1 C5 D DG 406 ? ? C6 D DG 406 ? ? N1 D DG 406 ? ? 114.55 111.50 3.05 0.50 N 33 1 "C3'" D DT 407 ? ? "C2'" D DT 407 ? ? "C1'" D DT 407 ? ? 95.82 102.40 -6.58 0.80 N 34 1 "O4'" D DT 407 ? ? "C1'" D DT 407 ? ? N1 D DT 407 ? ? 115.55 108.30 7.25 0.30 N 35 1 C2 D DT 407 ? ? N3 D DT 407 ? ? C4 D DT 407 ? ? 122.42 127.20 -4.78 0.60 N 36 1 N3 D DT 407 ? ? C4 D DT 407 ? ? C5 D DT 407 ? ? 118.91 115.20 3.71 0.60 N 37 1 "C3'" D DG 408 ? ? "C2'" D DG 408 ? ? "C1'" D DG 408 ? ? 97.23 102.40 -5.17 0.80 N 38 1 "O4'" D DG 408 ? ? "C1'" D DG 408 ? ? N9 D DG 408 ? ? 115.04 108.30 6.74 0.30 N 39 1 "C3'" D DG 408 ? ? "O3'" D DG 408 ? ? P D DT 409 ? ? 129.82 119.70 10.12 1.20 Y 40 1 OP1 D DT 409 ? ? P D DT 409 ? ? OP2 D DT 409 ? ? 107.29 119.60 -12.31 1.50 N 41 1 "O4'" D DT 409 ? ? "C1'" D DT 409 ? ? N1 D DT 409 ? ? 112.43 108.30 4.13 0.30 N 42 1 N1 D DT 409 ? ? C2 D DT 409 ? ? N3 D DT 409 ? ? 118.38 114.60 3.78 0.60 N 43 1 C2 D DT 409 ? ? N3 D DT 409 ? ? C4 D DT 409 ? ? 122.08 127.20 -5.12 0.60 N 44 1 N3 D DT 409 ? ? C4 D DT 409 ? ? O4 D DT 409 ? ? 115.22 119.90 -4.68 0.60 N 45 1 "C3'" D DT 409 ? ? "O3'" D DT 409 ? ? P D DG 410 ? ? 128.50 119.70 8.80 1.20 Y 46 1 "O5'" D DG 410 ? ? "C5'" D DG 410 ? ? "C4'" D DG 410 ? ? 100.02 109.40 -9.38 0.80 N 47 1 "O5'" D DG 411 ? ? P D DG 411 ? ? OP1 D DG 411 ? ? 118.64 110.70 7.94 1.20 N 48 1 "O5'" D DG 411 ? ? "C5'" D DG 411 ? ? "C4'" D DG 411 ? ? 103.22 109.40 -6.18 0.80 N 49 1 "C1'" D DG 411 ? ? "O4'" D DG 411 ? ? "C4'" D DG 411 ? ? 102.83 110.10 -7.27 1.00 N 50 1 "C3'" D DG 411 ? ? "C2'" D DG 411 ? ? "C1'" D DG 411 ? ? 93.41 102.40 -8.99 0.80 N 51 1 "O4'" D DG 411 ? ? "C1'" D DG 411 ? ? "C2'" D DG 411 ? ? 99.61 105.90 -6.29 0.80 N 52 1 "O4'" D DG 411 ? ? "C1'" D DG 411 ? ? N9 D DG 411 ? ? 117.30 108.30 9.00 0.30 N 53 1 OP1 D DT 412 ? ? P D DT 412 ? ? OP2 D DT 412 ? ? 110.58 119.60 -9.02 1.50 N 54 1 "O4'" D DT 412 ? ? "C1'" D DT 412 ? ? N1 D DT 412 ? ? 114.02 108.30 5.72 0.30 N 55 1 C2 D DT 412 ? ? N3 D DT 412 ? ? C4 D DT 412 ? ? 122.53 127.20 -4.67 0.60 N 56 1 N3 D DT 412 ? ? C4 D DT 412 ? ? C5 D DT 412 ? ? 119.00 115.20 3.80 0.60 N 57 1 "C3'" D DT 412 ? ? "O3'" D DT 412 ? ? P D DT 413 ? ? 132.37 119.70 12.67 1.20 Y 58 1 P D DT 413 ? ? "O5'" D DT 413 ? ? "C5'" D DT 413 ? ? 135.25 120.90 14.35 1.60 N 59 1 "O4'" D DT 413 ? ? "C1'" D DT 413 ? ? N1 D DT 413 ? ? 115.59 108.30 7.29 0.30 N 60 1 N1 D DT 413 ? ? C2 D DT 413 ? ? N3 D DT 413 ? ? 118.52 114.60 3.92 0.60 N 61 1 C2 D DT 413 ? ? N3 D DT 413 ? ? C4 D DT 413 ? ? 121.48 127.20 -5.72 0.60 N 62 1 N3 D DT 413 ? ? C4 D DT 413 ? ? C5 D DT 413 ? ? 119.61 115.20 4.41 0.60 N 63 1 OP1 D DG 414 ? ? P D DG 414 ? ? OP2 D DG 414 ? ? 107.66 119.60 -11.94 1.50 N 64 1 P D DG 414 ? ? "O5'" D DG 414 ? ? "C5'" D DG 414 ? ? 140.39 120.90 19.49 1.60 N 65 1 "C4'" D DG 414 ? ? "C3'" D DG 414 ? ? "C2'" D DG 414 ? ? 97.86 102.20 -4.34 0.70 N 66 1 "O4'" D DG 414 ? ? "C1'" D DG 414 ? ? N9 D DG 414 ? ? 111.97 108.30 3.67 0.30 N 67 1 C5 D DG 414 ? ? C6 D DG 414 ? ? N1 D DG 414 ? ? 114.57 111.50 3.07 0.50 N 68 1 "O3'" D DG 414 ? ? P D DG 415 ? ? "O5'" D DG 415 ? ? 116.28 104.00 12.28 1.90 Y 69 1 P D DG 415 ? ? "O5'" D DG 415 ? ? "C5'" D DG 415 ? ? 135.94 120.90 15.04 1.60 N 70 1 "O4'" D DG 415 ? ? "C1'" D DG 415 ? ? N9 D DG 415 ? ? 115.52 108.30 7.22 0.30 N 71 1 N1 D DG 415 ? ? C6 D DG 415 ? ? O6 D DG 415 ? ? 115.38 119.90 -4.52 0.60 N 72 1 CB L ASP 1 A ? CG L ASP 1 A ? OD2 L ASP 1 A ? 109.54 118.30 -8.76 0.90 N 73 1 OE1 L GLU 13 ? ? CD L GLU 13 ? ? OE2 L GLU 13 ? ? 135.01 123.30 11.71 1.20 N 74 1 N L THR 14 B ? CA L THR 14 B ? CB L THR 14 B ? 98.53 110.30 -11.77 1.90 N 75 1 OE1 L GLU 14 C ? CD L GLU 14 C ? OE2 L GLU 14 C ? 136.41 123.30 13.11 1.20 N 76 1 CB L LEU 14 G ? CA L LEU 14 G ? C L LEU 14 G ? 126.96 110.20 16.76 1.90 N 77 1 N L SER 14 I ? CA L SER 14 I ? CB L SER 14 I ? 97.33 110.50 -13.17 1.50 N 78 1 C H VAL 17 ? ? N H GLU 18 ? ? CA H GLU 18 ? ? 137.32 121.70 15.62 2.50 Y 79 1 N H GLU 18 ? ? CA H GLU 18 ? ? CB H GLU 18 ? ? 123.24 110.60 12.64 1.80 N 80 1 CB H ASP 21 ? ? CG H ASP 21 ? ? OD2 H ASP 21 ? ? 109.58 118.30 -8.72 0.90 N 81 1 CA H GLU 23 ? ? CB H GLU 23 ? ? CG H GLU 23 ? ? 127.45 113.40 14.05 2.20 N 82 1 O H VAL 31 ? ? C H VAL 31 ? ? N H MET 32 ? ? 134.16 122.70 11.46 1.60 Y 83 1 CB H LEU 33 ? ? CA H LEU 33 ? ? C H LEU 33 ? ? 124.23 110.20 14.03 1.90 N 84 1 CD H ARG 35 ? ? NE H ARG 35 ? ? CZ H ARG 35 ? ? 139.45 123.60 15.85 1.40 N 85 1 NE H ARG 35 ? ? CZ H ARG 35 ? ? NH1 H ARG 35 ? ? 124.94 120.30 4.64 0.50 N 86 1 NE H ARG 35 ? ? CZ H ARG 35 ? ? NH2 H ARG 35 ? ? 116.74 120.30 -3.56 0.50 N 87 1 CB H LEU 41 ? ? CA H LEU 41 ? ? C H LEU 41 ? ? 124.16 110.20 13.96 1.90 N 88 1 CB H ALA 55 ? ? CA H ALA 55 ? ? C H ALA 55 ? ? 120.51 110.10 10.41 1.50 N 89 1 N H ALA 55 ? ? CA H ALA 55 ? ? CB H ALA 55 ? ? 100.87 110.10 -9.23 1.40 N 90 1 CG H GLU 61 ? ? CD H GLU 61 ? ? OE1 H GLU 61 ? ? 131.17 118.30 12.87 2.00 N 91 1 CB H ASP 63 ? ? CG H ASP 63 ? ? OD2 H ASP 63 ? ? 124.28 118.30 5.98 0.90 N 92 1 CA H LEU 65 ? ? CB H LEU 65 ? ? CG H LEU 65 ? ? 131.09 115.30 15.79 2.30 N 93 1 NE H ARG 73 ? ? CZ H ARG 73 ? ? NH2 H ARG 73 ? ? 123.81 120.30 3.51 0.50 N 94 1 CB H THR 74 ? ? CA H THR 74 ? ? C H THR 74 ? ? 95.39 111.60 -16.21 2.70 N 95 1 NE H ARG 77 A ? CZ H ARG 77 A ? NH1 H ARG 77 A ? 124.20 120.30 3.90 0.50 N 96 1 OE1 H GLU 80 ? ? CD H GLU 80 ? ? OE2 H GLU 80 ? ? 132.92 123.30 9.62 1.20 N 97 1 C H SER 83 ? ? N H MET 84 ? ? CA H MET 84 ? ? 137.55 121.70 15.85 2.50 Y 98 1 CB H TYR 89 ? ? CG H TYR 89 ? ? CD1 H TYR 89 ? ? 117.11 121.00 -3.89 0.60 N 99 1 NE H ARG 93 ? ? CZ H ARG 93 ? ? NH2 H ARG 93 ? ? 124.62 120.30 4.32 0.50 N 100 1 NE H ARG 97 ? ? CZ H ARG 97 ? ? NH2 H ARG 97 ? ? 123.62 120.30 3.32 0.50 N 101 1 NE H ARG 101 ? ? CZ H ARG 101 ? ? NH2 H ARG 101 ? ? 123.91 120.30 3.61 0.50 N 102 1 O H ARG 101 ? ? C H ARG 101 ? ? N H ASP 102 ? ? 132.66 122.70 9.96 1.60 Y 103 1 CB H ASP 116 ? ? CG H ASP 116 ? ? OD2 H ASP 116 ? ? 124.36 118.30 6.06 0.90 N 104 1 O H CYS 122 ? ? C H CYS 122 ? ? N H LEU 123 ? ? 132.58 122.70 9.88 1.60 Y 105 1 CA H ARG 137 ? ? CB H ARG 137 ? ? CG H ARG 137 ? ? 126.86 113.40 13.46 2.20 N 106 1 CD H ARG 137 ? ? NE H ARG 137 ? ? CZ H ARG 137 ? ? 135.09 123.60 11.49 1.40 N 107 1 NE H ARG 137 ? ? CZ H ARG 137 ? ? NH1 H ARG 137 ? ? 129.00 120.30 8.70 0.50 N 108 1 CB H LEU 144 ? ? CA H LEU 144 ? ? C H LEU 144 ? ? 122.87 110.20 12.67 1.90 N 109 1 N H GLN 151 ? ? CA H GLN 151 ? ? CB H GLN 151 ? ? 122.11 110.60 11.51 1.80 N 110 1 O H GLN 156 ? ? C H GLN 156 ? ? N H VAL 157 ? ? 133.05 122.70 10.35 1.60 Y 111 1 O H LEU 160 ? ? C H LEU 160 ? ? N H PRO 161 ? ? 135.50 121.10 14.40 1.90 Y 112 1 NE H ARG 165 ? ? CZ H ARG 165 ? ? NH1 H ARG 165 ? ? 124.10 120.30 3.80 0.50 N 113 1 NE H ARG 165 ? ? CZ H ARG 165 ? ? NH2 H ARG 165 ? ? 115.60 120.30 -4.70 0.50 N 114 1 CA H ASP 170 ? ? CB H ASP 170 ? ? CG H ASP 170 ? ? 98.45 113.40 -14.95 2.20 N 115 1 NE H ARG 173 ? ? CZ H ARG 173 ? ? NH1 H ARG 173 ? ? 116.48 120.30 -3.82 0.50 N 116 1 NE H ARG 175 ? ? CZ H ARG 175 ? ? NH2 H ARG 175 ? ? 123.49 120.30 3.19 0.50 N 117 1 CA H CYS 182 ? ? CB H CYS 182 ? ? SG H CYS 182 ? ? 130.19 114.20 15.99 1.10 N 118 1 C H PRO 186 ? ? N H ASP 186 A ? CA H ASP 186 A ? 137.30 121.70 15.60 2.50 Y 119 1 CB H ASP 194 ? ? CG H ASP 194 ? ? OD1 H ASP 194 ? ? 106.49 118.30 -11.81 0.90 N 120 1 CB H ASP 194 ? ? CG H ASP 194 ? ? OD2 H ASP 194 ? ? 127.15 118.30 8.85 0.90 N 121 1 CB H PHE 204 A ? CG H PHE 204 A ? CD1 H PHE 204 A ? 115.64 120.80 -5.16 0.70 N 122 1 CD H ARG 206 ? ? NE H ARG 206 ? ? CZ H ARG 206 ? ? 134.20 123.60 10.60 1.40 N 123 1 NH1 H ARG 206 ? ? CZ H ARG 206 ? ? NH2 H ARG 206 ? ? 112.15 119.40 -7.25 1.10 N 124 1 NE H ARG 206 ? ? CZ H ARG 206 ? ? NH1 H ARG 206 ? ? 124.23 120.30 3.93 0.50 N 125 1 NE H ARG 206 ? ? CZ H ARG 206 ? ? NH2 H ARG 206 ? ? 123.32 120.30 3.02 0.50 N 126 1 O H TRP 207 ? ? C H TRP 207 ? ? N H TYR 208 ? ? 133.13 122.70 10.43 1.60 Y 127 1 C H TRP 215 ? ? N H GLY 216 ? ? CA H GLY 216 ? ? 135.57 122.30 13.27 2.10 Y 128 1 O H ARG 221 A ? C H ARG 221 A ? N H ASP 222 ? ? 135.78 122.70 13.08 1.60 Y 129 1 CB H ASP 222 ? ? CG H ASP 222 ? ? OD1 H ASP 222 ? ? 125.50 118.30 7.20 0.90 N 130 1 CB H PHE 232 ? ? CA H PHE 232 ? ? C H PHE 232 ? ? 98.40 110.40 -12.00 2.00 N 131 1 O H ILE 242 ? ? C H ILE 242 ? ? N H ASP 243 ? ? 133.75 122.70 11.05 1.60 Y 132 1 OE1 H GLU 247 ? ? CD H GLU 247 ? ? OE2 H GLU 247 ? ? 114.42 123.30 -8.88 1.20 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP L 1 A ? -104.07 62.21 2 1 PHE L 7 ? ? -122.38 -75.02 3 1 TYR L 14 J ? -49.63 -9.08 4 1 SER H 27 ? ? -158.27 78.97 5 1 LYS H 36 ? ? -78.43 -70.74 6 1 GLN H 38 ? ? -61.17 91.17 7 1 SER H 48 ? ? 177.48 155.74 8 1 ASP H 49 ? ? -39.91 -15.11 9 1 ARG H 50 ? ? -134.79 -34.60 10 1 HIS H 57 ? ? -54.53 -3.77 11 1 ASP H 60 E ? 86.13 17.88 12 1 ASN H 60 G ? -157.25 75.06 13 1 GLU H 61 ? ? -29.36 -32.20 14 1 HIS H 71 ? ? -153.24 -74.99 15 1 GLU H 77 ? ? -58.61 85.68 16 1 ARG H 77 A ? -29.50 -42.84 17 1 ILE H 79 ? ? -120.90 -50.35 18 1 ARG H 93 ? ? -79.23 22.36 19 1 GLU H 97 A ? -90.62 -61.77 20 1 ASN H 98 ? ? -159.20 11.06 21 1 ARG H 101 ? ? 39.85 60.36 22 1 LYS H 109 ? ? -63.15 -71.73 23 1 LEU H 130 ? ? -67.55 92.30 24 1 TRP H 141 ? ? -81.27 47.85 25 1 ARG H 165 ? ? -26.18 -51.07 26 1 GLU H 186 B ? -49.43 -2.81 27 1 LYS H 186 D ? -172.42 143.94 28 1 ASP H 189 ? ? 178.39 164.07 29 1 GLU H 192 ? ? -52.11 103.58 30 1 SER H 195 ? ? -29.62 135.50 31 1 PRO H 204 ? ? -97.66 34.81 32 1 ASN H 204 B ? -141.96 -6.51 33 1 SER H 214 ? ? -124.73 -56.11 34 1 TRP H 215 ? ? -163.18 -156.89 35 1 ASP H 221 ? ? 71.22 52.05 36 1 HIS H 230 ? ? -67.12 83.27 37 1 PHE H 232 ? ? -33.90 -76.94 38 1 ARG H 233 ? ? -27.72 -29.86 39 1 ASP H 243 ? ? -92.94 37.02 40 1 GLN H 244 ? ? -149.12 -32.32 41 1 PHE H 245 ? ? -170.95 25.80 # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 PHE H 60 H ? 13.06 2 1 ASN H 78 ? ? -12.66 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG D 401 ? ? 0.057 'SIDE CHAIN' 2 1 ARG L 14 D ? 0.123 'SIDE CHAIN' # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C2 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id H _pdbx_validate_chiral.auth_comp_id 0G6 _pdbx_validate_chiral.auth_seq_id 297 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 L THR -5 ? B THR 1 2 1 Y 1 L PHE -4 ? B PHE 2 3 1 Y 1 L GLY -3 ? B GLY 3 4 1 Y 1 L SER -2 ? B SER 4 5 1 Y 1 L GLY -1 ? B GLY 5 6 1 Y 1 L GLU 0 ? B GLU 6 7 1 Y 1 L ASP 15 ? B ASP 34 8 1 Y 1 L GLY 16 ? B GLY 35 9 1 Y 1 L ARG 17 ? B ARG 36 10 1 Y 1 H THR 148 A C THR 149 11 1 Y 1 H ALA 148 B C ALA 150 12 1 Y 1 H ASN 148 C C ASN 151 13 1 Y 1 H VAL 148 D C VAL 152 14 1 Y 1 H GLY 148 E C GLY 153 15 1 Y 1 H LYS 148 F C LYS 154 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1HAP 'hairpin loop' 1HAP 'quadruple helix' # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide' 0G6 5 water HOH #