HEADER HYDROLASE 29-NOV-00 1HF4 TITLE STRUCTURAL EFFECTS OF MONOVALENT ANIONS ON POLYMORPHIC LYSOZYME TITLE 2 CRYSTALS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HEN (GALLUS GALLUS) EGG-WHITE LYSOZYME, MUCOPEPTIDE, N- COMPND 5 ACETYLMURAMYL HYDROLASE; COMPND 6 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 TISSUE: EGG WHITE; SOURCE 6 CELLULAR_LOCATION: CYTOPLASM (WHITE) KEYWDS HYDROLASE, HYDROLASE (O-GLYCOSYL) EXPDTA X-RAY DIFFRACTION AUTHOR M.C.VANEY,I.BROUTIN,M.RIES-KAUTT,A.DUCRUIX REVDAT 6 13-DEC-23 1HF4 1 REMARK LINK REVDAT 5 06-MAR-19 1HF4 1 REMARK REVDAT 4 24-FEB-09 1HF4 1 VERSN REVDAT 3 18-JUL-03 1HF4 1 REMARK REVDAT 2 27-NOV-01 1HF4 1 JRNL REVDAT 1 07-JAN-01 1HF4 0 JRNL AUTH M.C.VANEY,I.BROUTIN,P.RETAILLEAU,A.DOUANGAMATH,S.LAFONT, JRNL AUTH 2 C.HAMIAUX,T.PRANGE,A.DUCRUIX,M.RIES-KAUTT JRNL TITL STRUCTURAL EFFECTS OF MONOVALENT ANIONS ON POLYMORPHIC JRNL TITL 2 LYSOZYME CRYSTALS JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 57 929 2001 JRNL REFN ISSN 0907-4449 JRNL PMID 11418760 JRNL DOI 10.1107/S0907444901004504 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH Z.DAUTER,M.DAUTER,K.R.RAJASHANKAR REMARK 1 TITL NOVEL APPROACH TO PHASING PROTEINS: DERIVATIZATION BY SHORT REMARK 1 TITL 2 CRYO-SOAKING WITH HALIDES REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 56 232 2000 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 10666615 REMARK 1 DOI 10.1107/S0907444999016352 REMARK 1 REFERENCE 2 REMARK 1 AUTH Z.DAUTER,M.DAUTER REMARK 1 TITL ANOMALOUS SIGNAL OF SOLVENT BROMIDES USED FOR PHASING OF REMARK 1 TITL 2 LYSOZYME REMARK 1 REF J.MOL.BIOL. V. 289 93 1999 REMARK 1 REFN ISSN 0022-2836 REMARK 1 PMID 10339408 REMARK 1 DOI 10.1006/JMBI.1999.2744 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.A.WALSH,T.R.SCHNEIDER,L.C.SIEKER,Z.DAUTER,V.S.LAMZIN, REMARK 1 AUTH 2 K.S.WILSON REMARK 1 TITL REFINEMENT OF TRICLINIC HEN EGG-WHITE LYSOZYME AT ATOMIC REMARK 1 TITL 2 RESOLUTION REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 522 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 9761848 REMARK 1 DOI 10.1107/S0907444997013656 REMARK 1 REFERENCE 4 REMARK 1 AUTH L.K.STEINRAUF REMARK 1 TITL STRUCTURES OF MONOCLINIC LYSOZYME IODIDE AT 1.6 A AND OF REMARK 1 TITL 2 TRICLINIC LYSOZYME NITRATE AT 1.1 A. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 767 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 9757091 REMARK 1 DOI 10.1107/S0907444997016922 REMARK 1 REFERENCE 5 REMARK 1 AUTH K.LIM,A.NADARAJAH,E.L.FORSYTHE,M.L.PUSEY REMARK 1 TITL LOCATIONS OF BROMIDE IONS IN TETRAGONAL LYSOZYME CRYSTALS REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 54 899 1998 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 9757106 REMARK 1 DOI 10.1107/S0907444998002844 REMARK 1 REFERENCE 6 REMARK 1 AUTH M.C.VANEY,S.MAIGNAN,M.RIES-KAUTT,A.DUCRUIX REMARK 1 TITL HIGH-RESOLUTION STRUCTURE (1.33 A) OF A HEW LYSOZYME REMARK 1 TITL 2 TETRAGONAL CRYSTAL GROWN IN THE APCF APPARATUS. DATA AND REMARK 1 TITL 3 STRUCTURAL COMPARISON WITH A CRYSTAL GROWN UNDER REMARK 1 TITL 4 MICROGRAVITY FROM SPACEHAB-01 MISSION. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 52 505 1996 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 15299672 REMARK 1 DOI 10.1107/S090744499501674X REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.853 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 31225 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3499 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.52 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3549 REMARK 3 BIN R VALUE (WORKING SET) : 0.3400 REMARK 3 BIN FREE R VALUE : 0.3900 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 11.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 403 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2002 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 251 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.350 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.140 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.500 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.730 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.210 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.700 ; 2.500 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : PARAM11.WAT REMARK 3 PARAMETER FILE 3 : PARAMETER.ELEMENTS REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH11.WAT REMARK 3 TOPOLOGY FILE 3 : TOPOLOGY.ELEMENTS REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE LOOP ARG73-ASN74 OF CHAIN B WAS REMARK 3 MODELED WITH ALTERNATE POSITIONS. IN CONTACT WITH THESE TWO REMARK 3 LOOPS CONFORMATIONS, TWO SODIUM IONS NA+ WERE REFINED WITH REMARK 3 ALTERNATE POSITIONS. ATOM OCCUPANCIES WERE REFINED FOR NA+ 350 REMARK 3 AND SOME NITRATE IONS: NO3-807 AND NO3-808, BUT NO ALTERNATE REMARK 3 POSITIONS WERE MODELLED. ALTHOUGH THERE ARE SOME BUMPS BETWEEN REMARK 3 ATOMS OF THE STRUCTURE, THESE ATOMS ARE CLEARLY DEFINED INTO THE REMARK 3 ELECTRON DENSITIES. REMARK 4 REMARK 4 1HF4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-NOV-00. REMARK 100 THE DEPOSITION ID IS D_1290005550. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JAN-96 REMARK 200 TEMPERATURE (KELVIN) : 293.0 REMARK 200 PH : 4.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LURE REMARK 200 BEAMLINE : DW32 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AGROVATA, ROTAVATA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35206 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 10.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.12000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.16000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.853 REMARK 200 STARTING MODEL: 5LYM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 24.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS OF NITRATE-LYSOZYME WERE REMARK 280 GROWN UNDER A MICRO GRAVITY ENVIRONMENT DURING THE USML-2 REMARK 280 MISSION LAUNCHED ON OCTOBER 1995 (SHUTTLE COLUMBIA). THE REMARK 280 CRYSTALLIZATION SETUP WAS THE APCF DEVELOPPED BY EUROPEAN SPACE REMARK 280 AGENCY. PROTEIN CONCENTRATION 10 MG/ML IN 50 MM SODIUM ACETATE REMARK 280 BUFFER AT PH 4.5. GRADIENT CONCENTRATION APPLIED FROM 0 TO FINAL REMARK 280 290 MM AT 293K, PH 4.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.36500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL_UNIT: MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 5 NE - CZ - NH2 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 5 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 128 56.76 39.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 150 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 60 O REMARK 620 2 ARG A 73 O 113.8 REMARK 620 3 HOH A2065 O 158.5 87.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 150 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 60 O REMARK 620 2 CYS B 64 O 82.3 REMARK 620 3 ARG B 73 O 113.2 100.5 REMARK 620 4 HOH B2072 O 86.4 78.0 160.1 REMARK 620 5 HOH B2076 O 145.2 113.0 95.2 67.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NO3 B 805 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 193L RELATED DB: PDB REMARK 900 THE 1.33 A STRUCTURE OF TETRAGONAL HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 194L RELATED DB: PDB REMARK 900 THE 1.40 A STRUCTURE OF SPACEHAB-01 HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1A2Y RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME, D18A MUTANT, IN COMPLEX WITH MOUSE REMARK 900 MONOCLONAL ANTIBODY D1.3 REMARK 900 RELATED ID: 1AKI RELATED DB: PDB REMARK 900 THE STRUCTURE OF THE ORTHORHOMBIC FORM OF HEN EGG-WHITE LYSOZYME AT REMARK 900 1.5 ANGSTROMS RESOLUTION REMARK 900 RELATED ID: 1AT5 RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME WITH A SUCCINIMIDE RESIDUE REMARK 900 RELATED ID: 1AT6 RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME WITH A ISOASPARTATE RESIDUE REMARK 900 RELATED ID: 1AZF RELATED DB: PDB REMARK 900 CHICKEN EGG WHITE LYSOZYME CRYSTAL GROWN IN BROMIDE SOLUTION REMARK 900 RELATED ID: 1B0D RELATED DB: PDB REMARK 900 STRUCTURAL EFFECTS OF MONOVALENT ANIONS ON POLYMORPHIC LYSOZYME REMARK 900 CRYSTALS REMARK 900 RELATED ID: 1B2K RELATED DB: PDB REMARK 900 STRUCTURAL EFFECTS OF MONOVALENT ANIONS ON POLYMORPHIC LYSOZYME REMARK 900 CRYSTALS REMARK 900 RELATED ID: 1BGI RELATED DB: PDB REMARK 900 ORTHORHOMBIC LYSOZYME CRYSTALLIZED AT HIGH TEMPERATURE (310K) REMARK 900 RELATED ID: 1BHZ RELATED DB: PDB REMARK 900 LOW TEMPERATURE MIDDLE RESOLUTION STRUCTURE OF HEN EGG WHITE REMARK 900 LYSOZYME FROM MASC DATA REMARK 900 RELATED ID: 1BVK RELATED DB: PDB REMARK 900 HUMANIZED ANTI-LYSOZYME FV COMPLEXED WITH LYSOZYME REMARK 900 RELATED ID: 1BVX RELATED DB: PDB REMARK 900 THE 1.8 A STRUCTURE OF GEL GROWN TETRAGONAL HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1BWH RELATED DB: PDB REMARK 900 THE 1.8 A STRUCTURE OF GROUND CONTROL GROWN TETRAGONAL HEN EGG REMARK 900 WHITE LYSOZYME REMARK 900 RELATED ID: 1BWI RELATED DB: PDB REMARK 900 THE 1.8 A STRUCTURE OF MICROBATCH OIL DROP GROWN TETRAGONAL HEN EGG REMARK 900 WHITE LYSOZYME REMARK 900 RELATED ID: 1BWJ RELATED DB: PDB REMARK 900 THE 1.8 A STRUCTURE OF MICROGRAVITY GROWN TETRAGONAL HEN EGG WHITE REMARK 900 LYSOZYME REMARK 900 RELATED ID: 1C08 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HYHEL-10 FV-HEN LYSOZYME COMPLEX REMARK 900 RELATED ID: 1C10 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HEW LYSOZYME UNDER PRESSURE OF XENON (8 BAR) REMARK 900 RELATED ID: 1DPW RELATED DB: PDB REMARK 900 STRUCTURE OF HEN EGG-WHITE LYSOZYME IN COMPLEX WITH MPD REMARK 900 RELATED ID: 1DPX RELATED DB: PDB REMARK 900 STRUCTURE OF HEN EGG-WHITE LYSOZYME REMARK 900 RELATED ID: 1DQJ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE ANTI-LYSOZYME ANTIBODY HYHEL-63 COMPLEXED REMARK 900 WITH HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1E8L RELATED DB: PDB REMARK 900 NMR SOLUTION STRUCTURE OF HEN LYSOZYME REMARK 900 RELATED ID: 1F0W RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ORTHORHOMBIC LYSOZYME GROWN AT PH 6.5 REMARK 900 RELATED ID: 1F10 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ORTHORHOMBIC LYSOZYME GROWN AT PH 6.5 AT 88% REMARK 900 RELATIVE HUMIDITY REMARK 900 RELATED ID: 1F3J RELATED DB: PDB REMARK 900 HISTOCOMPATIBILITY ANTIGEN I-AG7 REMARK 900 RELATED ID: 1FLQ RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FORGLYCINE REMARK 900 RELATED ID: 1FLU RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FORGLYCINE REMARK 900 RELATED ID: 1FLW RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FORGLYCINE REMARK 900 RELATED ID: 1FLY RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FORGLYCINE REMARK 900 RELATED ID: 1FN5 RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FORGLYCINE REMARK 900 RELATED ID: 1HSW RELATED DB: PDB REMARK 900 LYSOZYME (MUCOPEPTIDE N-ACETYLMURAMYL HYDROLASE) REMARK 900 RELATED ID: 1HSX RELATED DB: PDB REMARK 900 LYSOZYME GROWN AT BASIC PH AND ITS LOW HUMIDITY VARIANT REMARK 900 RELATED ID: 1JPO RELATED DB: PDB REMARK 900 LOW TEMPERATURE ORTHORHOMBIC LYSOZYME REMARK 900 RELATED ID: 1KIP RELATED DB: PDB REMARK 900 FV MUTANT Y(B 32)A (VH DOMAIN) OF MOUSE MONOCLONAL ANTIBODY D1.3 REMARK 900 COMPLEXED WITH HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1KIQ RELATED DB: PDB REMARK 900 FV MUTANT Y(B 101)F (VH DOMAIN) OF MOUSE MONOCLONAL ANTIBODY D1.3 REMARK 900 COMPLEXED WITH HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1KIR RELATED DB: PDB REMARK 900 FV MUTANT Y(A 50)S (VL DOMAIN) OF MOUSE MONOCLONAL ANTIBODY D1.3 REMARK 900 COMPLEXED WITH HEN EGG WHITE LYSOZYME REMARK 900 RELATED ID: 1KXW RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1KXX RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1KXY RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1LCN RELATED DB: PDB REMARK 900 MONOCLINIC HEN EGG WHITE LYSOZYME, THIOCYANATE COMPLEX REMARK 900 RELATED ID: 1LKR RELATED DB: PDB REMARK 900 MONOCLINIC HEN EGG WHITE LYSOZYME IODIDE REMARK 900 RELATED ID: 1LKS RELATED DB: PDB REMARK 900 HEN EGG WHITE LYSOZYME NITRATE REMARK 900 RELATED ID: 1LPI RELATED DB: PDB REMARK 900 HEW LYSOZYME: TRP...NA CATION-PI INTERACTION REMARK 900 RELATED ID: 1LYO RELATED DB: PDB REMARK 900 CROSS-LINKED LYSOZYME CRYSTAL IN NEAT WATER REMARK 900 RELATED ID: 1LZ8 RELATED DB: PDB REMARK 900 LYSOZYME PHASED ON ANOMALOUS SIGNAL OF SULFURS AND CHLORINES REMARK 900 RELATED ID: 1LZN RELATED DB: PDB REMARK 900 NEUTRON STRUCTURE OF HEN EGG-WHITE LYSOZYME REMARK 900 RELATED ID: 1MEL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A CAMEL SINGLE-DOMAIN VH ANTIBODY FRAGMENT IN REMARK 900 COMPLEX WITH LYSOZYME REMARK 900 RELATED ID: 1QTK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HEW LYSOZYME UNDER PRESSURE OF KRYPTON (55 BAR) REMARK 900 RELATED ID: 1RFP RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UCO RELATED DB: PDB REMARK 900 HEN EGG-WHITE LYSOZYME, LOW HUMIDITY FORM REMARK 900 RELATED ID: 1UIA RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIB RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIC RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UID RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIE RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIF RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIG RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1UIH RELATED DB: PDB REMARK 900 ANALYSIS OF THE STABILIZATION OF HEN LYSOZYME WITH THE HELIX DIPOLE REMARK 900 AND CHARGED SIDE CHAINS REMARK 900 RELATED ID: 1XEI RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURES OF LYSOZYME AT VERY LOW LEVELS OF HYDRATION REMARK 900 RELATED ID: 1XEJ RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURES OF LYSOZYME AT VERY LOW LEVELS OF HYDRATION REMARK 900 RELATED ID: 1XEK RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURES OF LYSOZYME AT VERY LOW LEVELS OF HYDRATION REMARK 900 RELATED ID: 2LYO RELATED DB: PDB REMARK 900 CROSS-LINKED CHICKEN LYSOZYME CRYSTAL IN 90% ACETONITRILE-WATER REMARK 900 RELATED ID: 3LYO RELATED DB: PDB REMARK 900 CROSS-LINKED CHICKEN LYSOZYME CRYSTAL IN 95% ACETONITRILE-WATER REMARK 900 RELATED ID: 3LZT RELATED DB: PDB REMARK 900 REFINEMENT OF TRICLINIC LYSOZYME AT ATOMIC RESOLUTION REMARK 900 RELATED ID: 4LYO RELATED DB: PDB REMARK 900 CROSS-LINKED CHICKEN LYSOZYME CRYSTAL IN NEAT ACETONITRILE, THEN REMARK 900 BACK-SOAKED IN WATER REMARK 900 RELATED ID: 4LZT RELATED DB: PDB REMARK 900 ATOMIC RESOLUTION REFINEMENT OF TRICLINIC HEW LYSOZYME AT 295K DBREF 1HF4 A 1 129 UNP P00698 LYC_CHICK 19 147 DBREF 1HF4 B 1 129 UNP P00698 LYC_CHICK 19 147 SEQRES 1 A 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 A 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 A 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 A 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 A 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 A 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 A 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 A 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 A 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 A 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU SEQRES 1 B 129 LYS VAL PHE GLY ARG CYS GLU LEU ALA ALA ALA MET LYS SEQRES 2 B 129 ARG HIS GLY LEU ASP ASN TYR ARG GLY TYR SER LEU GLY SEQRES 3 B 129 ASN TRP VAL CYS ALA ALA LYS PHE GLU SER ASN PHE ASN SEQRES 4 B 129 THR GLN ALA THR ASN ARG ASN THR ASP GLY SER THR ASP SEQRES 5 B 129 TYR GLY ILE LEU GLN ILE ASN SER ARG TRP TRP CYS ASN SEQRES 6 B 129 ASP GLY ARG THR PRO GLY SER ARG ASN LEU CYS ASN ILE SEQRES 7 B 129 PRO CYS SER ALA LEU LEU SER SER ASP ILE THR ALA SER SEQRES 8 B 129 VAL ASN CYS ALA LYS LYS ILE VAL SER ASP GLY ASN GLY SEQRES 9 B 129 MET ASN ALA TRP VAL ALA TRP ARG ASN ARG CYS LYS GLY SEQRES 10 B 129 THR ASP VAL GLN ALA TRP ILE ARG GLY CYS ARG LEU HET NA A 150 1 HET NO3 A 801 4 HET NO3 A 802 4 HET NO3 A 803 4 HET NA B 150 2 HET NO3 B 801 4 HET NO3 B 802 4 HET NO3 B 803 4 HET NO3 B 804 4 HET NO3 B 805 4 HETNAM NA SODIUM ION HETNAM NO3 NITRATE ION FORMUL 3 NA 2(NA 1+) FORMUL 4 NO3 8(N O3 1-) FORMUL 13 HOH *251(H2 O) HELIX 1 1 GLY A 4 HIS A 15 1 12 HELIX 2 2 SER A 24 ASN A 37 1 14 HELIX 3 3 CYS A 80 SER A 85 5 6 HELIX 4 4 ILE A 88 SER A 100 1 13 HELIX 5 5 ASN A 103 ALA A 107 5 5 HELIX 6 6 TRP A 108 CYS A 115 1 8 HELIX 7 7 ASP A 119 ARG A 125 5 7 HELIX 8 8 GLY B 4 HIS B 15 1 12 HELIX 9 9 SER B 24 ASN B 37 1 14 HELIX 10 10 CYS B 80 SER B 85 5 6 HELIX 11 11 ILE B 88 VAL B 99 1 12 HELIX 12 12 ASN B 103 ALA B 107 5 5 HELIX 13 13 TRP B 108 CYS B 115 1 8 HELIX 14 14 ASP B 119 ARG B 125 5 7 SHEET 1 AA 3 THR A 43 ARG A 45 0 SHEET 2 AA 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SHEET 1 BA 3 THR B 43 ARG B 45 0 SHEET 2 BA 3 THR B 51 TYR B 53 -1 O ASP B 52 N ASN B 44 SHEET 3 BA 3 ILE B 58 ASN B 59 -1 O ILE B 58 N TYR B 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.04 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.03 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.03 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.03 SSBOND 5 CYS B 6 CYS B 127 1555 1555 2.03 SSBOND 6 CYS B 30 CYS B 115 1555 1555 2.03 SSBOND 7 CYS B 64 CYS B 80 1555 1555 2.02 SSBOND 8 CYS B 76 CYS B 94 1555 1555 2.02 LINK O SER A 60 NA A NA A 150 1555 1555 2.37 LINK O ARG A 73 NA A NA A 150 1555 1555 2.38 LINK NA A NA A 150 O HOH A2065 1555 1555 2.28 LINK O SER B 60 NA A NA B 150 1555 1555 2.22 LINK O CYS B 64 NA A NA B 150 1555 1555 2.43 LINK O AARG B 73 NA A NA B 150 1555 1555 2.20 LINK NA A NA B 150 O HOH B2072 1555 1555 2.55 LINK NA A NA B 150 O HOH B2076 1555 1555 2.51 SITE 1 AC1 6 SER A 60 CYS A 64 SER A 72 ARG A 73 SITE 2 AC1 6 HOH A2058 HOH A2065 SITE 1 AC2 7 SER B 60 CYS B 64 ARG B 73 ASN B 74 SITE 2 AC2 7 HOH B2069 HOH B2072 HOH B2076 SITE 1 AC3 9 ASN A 65 ASN A 74 ASN A 77 ILE A 78 SITE 2 AC3 9 PRO A 79 HOH A2119 ARG B 112 LYS B 116 SITE 3 AC3 9 HOH B2109 SITE 1 AC4 5 LYS A 1 GLN A 41 SER A 86 HOH A2120 SITE 2 AC4 5 HOH A2121 SITE 1 AC5 7 PHE A 3 ALA A 11 ARG A 14 HIS A 15 SITE 2 AC5 7 SER A 86 ASP A 87 ILE A 88 SITE 1 AC6 7 ARG A 112 LYS A 116 ASN B 65 ASN B 74 SITE 2 AC6 7 ASN B 77 ILE B 78 PRO B 79 SITE 1 AC7 3 GLY B 126 HOH B2126 HOH B2127 SITE 1 AC8 8 ARG A 21 GLY A 22 ASN B 65 ASP B 66 SITE 2 AC8 8 PRO B 79 CYS B 80 SER B 81 HOH B2128 SITE 1 AC9 10 PHE B 3 ALA B 11 ARG B 14 HIS B 15 SITE 2 AC9 10 SER B 86 ASP B 87 ILE B 88 THR B 89 SITE 3 AC9 10 HOH B2084 HOH B2129 SITE 1 BC1 5 ARG B 45 ASN B 46 THR B 47 GLY B 49 SITE 2 BC1 5 HOH B2130 CRYST1 27.940 62.730 60.250 90.00 90.76 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.035791 0.000000 0.000475 0.00000 SCALE2 0.000000 0.015941 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016599 0.00000