data_1HLV # _entry.id 1HLV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1HLV pdb_00001hlv 10.2210/pdb1hlv/pdb NDB PD0192 ? ? RCSB RCSB012438 ? ? WWPDB D_1000012438 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-01-11 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1HLV _pdbx_database_status.recvd_initial_deposition_date 2000-12-04 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1BW6 'Solution structure of CENP-B(1-56)' unspecified PDB 1IGN ;Crystal structure of the DNA-binding domain of yeast RAP1 in complex with telomeric DNA. ; unspecified PDB 6PAX 'Crystal Structure of the Human Pax-6 Paired Domain-DNA Complex' unspecified TargetDB trt001000209.1 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tanaka, Y.' 1 'Nureki, O.' 2 'Kurumizaka, H.' 3 'Fukai, S.' 4 'Kawaguchi, S.' 5 'Ikuta, M.' 6 'Iwahara, J.' 7 'Okazaki, T.' 8 'Yokoyama, S.' 9 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 10 # _citation.id primary _citation.title 'Crystal structure of the CENP-B protein-DNA complex: the DNA-binding domains of CENP-B induce kinks in the CENP-B box DNA.' _citation.journal_abbrev 'EMBO J.' _citation.journal_volume 20 _citation.page_first 6612 _citation.page_last 6618 _citation.year 2001 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11726497 _citation.pdbx_database_id_DOI 10.1093/emboj/20.23.6612 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tanaka, Y.' 1 ? primary 'Nureki, O.' 2 ? primary 'Kurumizaka, H.' 3 ? primary 'Fukai, S.' 4 ? primary 'Kawaguchi, S.' 5 ? primary 'Ikuta, M.' 6 ? primary 'Iwahara, J.' 7 ? primary 'Okazaki, T.' 8 ? primary 'Yokoyama, S.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'CENP-B BOX DNA' 6494.195 1 ? ? ? ? 2 polymer syn 'CENP-B BOX DNA' 6392.151 1 ? ? ? ? 3 polymer man 'MAJOR CENTROMERE AUTOANTIGEN B' 15169.706 1 ? ? 'DNA BINDING DOMAIN' ? 4 water nat water 18.015 98 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name CENP-B # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DG)(DC)(DC)(DT)(DT)(DC)(DG)(DT)(DT)(DG)(DG)(DA)(DA)(DA)(DC)(DG)(DG)(DG)(DA)(DT) (DT) ; GCCTTCGTTGGAAACGGGATT B ? 2 polydeoxyribonucleotide no no ;(DA)(DA)(DT)(DC)(DC)(DC)(DG)(DT)(DT)(DT)(DC)(DC)(DA)(DA)(DC)(DG)(DA)(DA)(DG)(DG) (DC) ; AATCCCGTTTCCAACGAAGGC C ? 3 'polypeptide(L)' no no ;MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSPYDKLEGL LIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRRRS ; ;MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSPYDKLEGL LIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRRRS ; A trt001000209.1 # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DC n 1 4 DT n 1 5 DT n 1 6 DC n 1 7 DG n 1 8 DT n 1 9 DT n 1 10 DG n 1 11 DG n 1 12 DA n 1 13 DA n 1 14 DA n 1 15 DC n 1 16 DG n 1 17 DG n 1 18 DG n 1 19 DA n 1 20 DT n 1 21 DT n 2 1 DA n 2 2 DA n 2 3 DT n 2 4 DC n 2 5 DC n 2 6 DC n 2 7 DG n 2 8 DT n 2 9 DT n 2 10 DT n 2 11 DC n 2 12 DC n 2 13 DA n 2 14 DA n 2 15 DC n 2 16 DG n 2 17 DA n 2 18 DA n 2 19 DG n 2 20 DG n 2 21 DC n 3 1 MET n 3 2 GLY n 3 3 PRO n 3 4 LYS n 3 5 ARG n 3 6 ARG n 3 7 GLN n 3 8 LEU n 3 9 THR n 3 10 PHE n 3 11 ARG n 3 12 GLU n 3 13 LYS n 3 14 SER n 3 15 ARG n 3 16 ILE n 3 17 ILE n 3 18 GLN n 3 19 GLU n 3 20 VAL n 3 21 GLU n 3 22 GLU n 3 23 ASN n 3 24 PRO n 3 25 ASP n 3 26 LEU n 3 27 ARG n 3 28 LYS n 3 29 GLY n 3 30 GLU n 3 31 ILE n 3 32 ALA n 3 33 ARG n 3 34 ARG n 3 35 PHE n 3 36 ASN n 3 37 ILE n 3 38 PRO n 3 39 PRO n 3 40 SER n 3 41 THR n 3 42 LEU n 3 43 SER n 3 44 THR n 3 45 ILE n 3 46 LEU n 3 47 LYS n 3 48 ASN n 3 49 LYS n 3 50 ARG n 3 51 ALA n 3 52 ILE n 3 53 LEU n 3 54 ALA n 3 55 SER n 3 56 GLU n 3 57 ARG n 3 58 LYS n 3 59 TYR n 3 60 GLY n 3 61 VAL n 3 62 ALA n 3 63 SER n 3 64 THR n 3 65 CYS n 3 66 ARG n 3 67 LYS n 3 68 THR n 3 69 ASN n 3 70 LYS n 3 71 LEU n 3 72 SER n 3 73 PRO n 3 74 TYR n 3 75 ASP n 3 76 LYS n 3 77 LEU n 3 78 GLU n 3 79 GLY n 3 80 LEU n 3 81 LEU n 3 82 ILE n 3 83 ALA n 3 84 TRP n 3 85 PHE n 3 86 GLN n 3 87 GLN n 3 88 ILE n 3 89 ARG n 3 90 ALA n 3 91 ALA n 3 92 GLY n 3 93 LEU n 3 94 PRO n 3 95 VAL n 3 96 LYS n 3 97 GLY n 3 98 ILE n 3 99 ILE n 3 100 LEU n 3 101 LYS n 3 102 GLU n 3 103 LYS n 3 104 ALA n 3 105 LEU n 3 106 ARG n 3 107 ILE n 3 108 ALA n 3 109 GLU n 3 110 GLU n 3 111 LEU n 3 112 GLY n 3 113 MET n 3 114 ASP n 3 115 ASP n 3 116 PHE n 3 117 THR n 3 118 ALA n 3 119 SER n 3 120 ASN n 3 121 GLY n 3 122 TRP n 3 123 LEU n 3 124 ASP n 3 125 ARG n 3 126 PHE n 3 127 ARG n 3 128 ARG n 3 129 ARG n 3 130 ARG n 3 131 SER n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene CENP-B _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'JM109(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET15D _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'This sequence occurs naturally in humans.' 2 1 sample ? ? ? ? ? 'This sequence occurs naturally in humans.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG GUA B . n A 1 2 DC 2 2 2 DC CYT B . n A 1 3 DC 3 3 3 DC CYT B . n A 1 4 DT 4 4 4 DT THY B . n A 1 5 DT 5 5 5 DT THY B . n A 1 6 DC 6 6 6 DC CYT B . n A 1 7 DG 7 7 7 DG GUA B . n A 1 8 DT 8 8 8 DT THY B . n A 1 9 DT 9 9 9 DT THY B . n A 1 10 DG 10 10 10 DG GUA B . n A 1 11 DG 11 11 11 DG GUA B . n A 1 12 DA 12 12 12 DA ADE B . n A 1 13 DA 13 13 13 DA ADE B . n A 1 14 DA 14 14 14 DA ADE B . n A 1 15 DC 15 15 15 DC CYT B . n A 1 16 DG 16 16 16 DG GUA B . n A 1 17 DG 17 17 17 DG GUA B . n A 1 18 DG 18 18 18 DG GUA B . n A 1 19 DA 19 19 19 DA ADE B . n A 1 20 DT 20 20 20 DT THY B . n A 1 21 DT 21 21 21 DT THY B . n B 2 1 DA 1 1 1 DA ADE C . n B 2 2 DA 2 2 2 DA ADE C . n B 2 3 DT 3 3 3 DT THY C . n B 2 4 DC 4 4 4 DC CYT C . n B 2 5 DC 5 5 5 DC CYT C . n B 2 6 DC 6 6 6 DC CYT C . n B 2 7 DG 7 7 7 DG GUA C . n B 2 8 DT 8 8 8 DT THY C . n B 2 9 DT 9 9 9 DT THY C . n B 2 10 DT 10 10 10 DT THY C . n B 2 11 DC 11 11 11 DC CYT C . n B 2 12 DC 12 12 12 DC CYT C . n B 2 13 DA 13 13 13 DA ADE C . n B 2 14 DA 14 14 14 DA ADE C . n B 2 15 DC 15 15 15 DC CYT C . n B 2 16 DG 16 16 16 DG GUA C . n B 2 17 DA 17 17 17 DA ADE C . n B 2 18 DA 18 18 18 DA ADE C . n B 2 19 DG 19 19 19 DG GUA C . n B 2 20 DG 20 20 20 DG GUA C . n B 2 21 DC 21 21 21 DC CYT C . n C 3 1 MET 1 1 1 MET MET A . n C 3 2 GLY 2 2 2 GLY GLY A . n C 3 3 PRO 3 3 3 PRO PRO A . n C 3 4 LYS 4 4 4 LYS LYS A . n C 3 5 ARG 5 5 5 ARG ARG A . n C 3 6 ARG 6 6 6 ARG ARG A . n C 3 7 GLN 7 7 7 GLN GLN A . n C 3 8 LEU 8 8 8 LEU LEU A . n C 3 9 THR 9 9 9 THR THR A . n C 3 10 PHE 10 10 10 PHE PHE A . n C 3 11 ARG 11 11 11 ARG ARG A . n C 3 12 GLU 12 12 12 GLU GLU A . n C 3 13 LYS 13 13 13 LYS LYS A . n C 3 14 SER 14 14 14 SER SER A . n C 3 15 ARG 15 15 15 ARG ARG A . n C 3 16 ILE 16 16 16 ILE ILE A . n C 3 17 ILE 17 17 17 ILE ILE A . n C 3 18 GLN 18 18 18 GLN GLN A . n C 3 19 GLU 19 19 19 GLU GLU A . n C 3 20 VAL 20 20 20 VAL VAL A . n C 3 21 GLU 21 21 21 GLU GLU A . n C 3 22 GLU 22 22 22 GLU GLU A . n C 3 23 ASN 23 23 23 ASN ASN A . n C 3 24 PRO 24 24 24 PRO PRO A . n C 3 25 ASP 25 25 25 ASP ASP A . n C 3 26 LEU 26 26 26 LEU LEU A . n C 3 27 ARG 27 27 27 ARG ARG A . n C 3 28 LYS 28 28 28 LYS LYS A . n C 3 29 GLY 29 29 29 GLY GLY A . n C 3 30 GLU 30 30 30 GLU GLU A . n C 3 31 ILE 31 31 31 ILE ILE A . n C 3 32 ALA 32 32 32 ALA ALA A . n C 3 33 ARG 33 33 33 ARG ARG A . n C 3 34 ARG 34 34 34 ARG ARG A . n C 3 35 PHE 35 35 35 PHE PHE A . n C 3 36 ASN 36 36 36 ASN ASN A . n C 3 37 ILE 37 37 37 ILE ILE A . n C 3 38 PRO 38 38 38 PRO PRO A . n C 3 39 PRO 39 39 39 PRO PRO A . n C 3 40 SER 40 40 40 SER SER A . n C 3 41 THR 41 41 41 THR THR A . n C 3 42 LEU 42 42 42 LEU LEU A . n C 3 43 SER 43 43 43 SER SER A . n C 3 44 THR 44 44 44 THR THR A . n C 3 45 ILE 45 45 45 ILE ILE A . n C 3 46 LEU 46 46 46 LEU LEU A . n C 3 47 LYS 47 47 47 LYS LYS A . n C 3 48 ASN 48 48 48 ASN ASN A . n C 3 49 LYS 49 49 49 LYS LYS A . n C 3 50 ARG 50 50 50 ARG ARG A . n C 3 51 ALA 51 51 51 ALA ALA A . n C 3 52 ILE 52 52 52 ILE ILE A . n C 3 53 LEU 53 53 53 LEU LEU A . n C 3 54 ALA 54 54 54 ALA ALA A . n C 3 55 SER 55 55 55 SER SER A . n C 3 56 GLU 56 56 56 GLU GLU A . n C 3 57 ARG 57 57 57 ARG ARG A . n C 3 58 LYS 58 58 58 LYS LYS A . n C 3 59 TYR 59 59 59 TYR TYR A . n C 3 60 GLY 60 60 60 GLY GLY A . n C 3 61 VAL 61 61 61 VAL VAL A . n C 3 62 ALA 62 62 62 ALA ALA A . n C 3 63 SER 63 63 63 SER SER A . n C 3 64 THR 64 64 64 THR THR A . n C 3 65 CYS 65 65 65 CYS CYS A . n C 3 66 ARG 66 66 66 ARG ARG A . n C 3 67 LYS 67 67 67 LYS LYS A . n C 3 68 THR 68 68 68 THR THR A . n C 3 69 ASN 69 69 69 ASN ASN A . n C 3 70 LYS 70 70 70 LYS LYS A . n C 3 71 LEU 71 71 71 LEU LEU A . n C 3 72 SER 72 72 72 SER SER A . n C 3 73 PRO 73 73 73 PRO PRO A . n C 3 74 TYR 74 74 74 TYR TYR A . n C 3 75 ASP 75 75 75 ASP ASP A . n C 3 76 LYS 76 76 76 LYS LYS A . n C 3 77 LEU 77 77 77 LEU LEU A . n C 3 78 GLU 78 78 78 GLU GLU A . n C 3 79 GLY 79 79 79 GLY GLY A . n C 3 80 LEU 80 80 80 LEU LEU A . n C 3 81 LEU 81 81 81 LEU LEU A . n C 3 82 ILE 82 82 82 ILE ILE A . n C 3 83 ALA 83 83 83 ALA ALA A . n C 3 84 TRP 84 84 84 TRP TRP A . n C 3 85 PHE 85 85 85 PHE PHE A . n C 3 86 GLN 86 86 86 GLN GLN A . n C 3 87 GLN 87 87 87 GLN GLN A . n C 3 88 ILE 88 88 88 ILE ILE A . n C 3 89 ARG 89 89 89 ARG ARG A . n C 3 90 ALA 90 90 90 ALA ALA A . n C 3 91 ALA 91 91 91 ALA ALA A . n C 3 92 GLY 92 92 92 GLY GLY A . n C 3 93 LEU 93 93 93 LEU LEU A . n C 3 94 PRO 94 94 94 PRO PRO A . n C 3 95 VAL 95 95 95 VAL VAL A . n C 3 96 LYS 96 96 96 LYS LYS A . n C 3 97 GLY 97 97 97 GLY GLY A . n C 3 98 ILE 98 98 98 ILE ILE A . n C 3 99 ILE 99 99 99 ILE ILE A . n C 3 100 LEU 100 100 100 LEU LEU A . n C 3 101 LYS 101 101 101 LYS LYS A . n C 3 102 GLU 102 102 102 GLU GLU A . n C 3 103 LYS 103 103 103 LYS LYS A . n C 3 104 ALA 104 104 104 ALA ALA A . n C 3 105 LEU 105 105 105 LEU LEU A . n C 3 106 ARG 106 106 106 ARG ARG A . n C 3 107 ILE 107 107 107 ILE ILE A . n C 3 108 ALA 108 108 108 ALA ALA A . n C 3 109 GLU 109 109 109 GLU GLU A . n C 3 110 GLU 110 110 110 GLU GLU A . n C 3 111 LEU 111 111 111 LEU LEU A . n C 3 112 GLY 112 112 112 GLY GLY A . n C 3 113 MET 113 113 113 MET MET A . n C 3 114 ASP 114 114 114 ASP ASP A . n C 3 115 ASP 115 115 115 ASP ASP A . n C 3 116 PHE 116 116 116 PHE PHE A . n C 3 117 THR 117 117 117 THR THR A . n C 3 118 ALA 118 118 118 ALA ALA A . n C 3 119 SER 119 119 119 SER SER A . n C 3 120 ASN 120 120 120 ASN ASN A . n C 3 121 GLY 121 121 121 GLY GLY A . n C 3 122 TRP 122 122 122 TRP TRP A . n C 3 123 LEU 123 123 123 LEU LEU A . n C 3 124 ASP 124 124 124 ASP ASP A . n C 3 125 ARG 125 125 125 ARG ARG A . n C 3 126 PHE 126 126 126 PHE PHE A . n C 3 127 ARG 127 127 127 ARG ARG A . n C 3 128 ARG 128 128 128 ARG ARG A . n C 3 129 ARG 129 129 129 ARG ARG A . n C 3 130 ARG 130 130 130 ARG ARG A . n C 3 131 SER 131 131 131 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 22 4 HOH TIP B . D 4 HOH 2 23 6 HOH TIP B . D 4 HOH 3 24 7 HOH TIP B . D 4 HOH 4 25 13 HOH TIP B . D 4 HOH 5 26 14 HOH TIP B . D 4 HOH 6 27 20 HOH TIP B . D 4 HOH 7 28 22 HOH TIP B . D 4 HOH 8 29 24 HOH TIP B . D 4 HOH 9 30 29 HOH TIP B . D 4 HOH 10 31 32 HOH TIP B . D 4 HOH 11 32 33 HOH TIP B . D 4 HOH 12 33 36 HOH TIP B . D 4 HOH 13 34 40 HOH TIP B . D 4 HOH 14 35 45 HOH TIP B . D 4 HOH 15 36 50 HOH TIP B . D 4 HOH 16 37 51 HOH TIP B . D 4 HOH 17 38 63 HOH TIP B . D 4 HOH 18 39 65 HOH TIP B . D 4 HOH 19 40 68 HOH TIP B . D 4 HOH 20 41 69 HOH TIP B . D 4 HOH 21 42 75 HOH TIP B . D 4 HOH 22 43 76 HOH TIP B . D 4 HOH 23 44 77 HOH TIP B . D 4 HOH 24 45 79 HOH TIP B . D 4 HOH 25 46 80 HOH TIP B . D 4 HOH 26 47 81 HOH TIP B . D 4 HOH 27 48 84 HOH TIP B . D 4 HOH 28 49 85 HOH TIP B . D 4 HOH 29 50 91 HOH TIP B . D 4 HOH 30 51 96 HOH TIP B . E 4 HOH 1 22 8 HOH TIP C . E 4 HOH 2 23 12 HOH TIP C . E 4 HOH 3 24 16 HOH TIP C . E 4 HOH 4 25 18 HOH TIP C . E 4 HOH 5 26 21 HOH TIP C . E 4 HOH 6 27 23 HOH TIP C . E 4 HOH 7 28 25 HOH TIP C . E 4 HOH 8 29 31 HOH TIP C . E 4 HOH 9 30 34 HOH TIP C . E 4 HOH 10 31 38 HOH TIP C . E 4 HOH 11 32 43 HOH TIP C . E 4 HOH 12 33 46 HOH TIP C . E 4 HOH 13 34 49 HOH TIP C . E 4 HOH 14 35 53 HOH TIP C . E 4 HOH 15 36 58 HOH TIP C . E 4 HOH 16 37 60 HOH TIP C . E 4 HOH 17 38 62 HOH TIP C . E 4 HOH 18 39 70 HOH TIP C . E 4 HOH 19 40 71 HOH TIP C . E 4 HOH 20 41 72 HOH TIP C . E 4 HOH 21 42 86 HOH TIP C . E 4 HOH 22 43 93 HOH TIP C . E 4 HOH 23 44 94 HOH TIP C . E 4 HOH 24 45 95 HOH TIP C . F 4 HOH 1 132 1 HOH TIP A . F 4 HOH 2 133 2 HOH TIP A . F 4 HOH 3 134 3 HOH TIP A . F 4 HOH 4 135 5 HOH TIP A . F 4 HOH 5 136 9 HOH TIP A . F 4 HOH 6 137 10 HOH TIP A . F 4 HOH 7 138 11 HOH TIP A . F 4 HOH 8 139 15 HOH TIP A . F 4 HOH 9 140 17 HOH TIP A . F 4 HOH 10 141 19 HOH TIP A . F 4 HOH 11 142 26 HOH TIP A . F 4 HOH 12 143 27 HOH TIP A . F 4 HOH 13 144 28 HOH TIP A . F 4 HOH 14 145 30 HOH TIP A . F 4 HOH 15 146 35 HOH TIP A . F 4 HOH 16 147 37 HOH TIP A . F 4 HOH 17 148 39 HOH TIP A . F 4 HOH 18 149 41 HOH TIP A . F 4 HOH 19 150 42 HOH TIP A . F 4 HOH 20 151 44 HOH TIP A . F 4 HOH 21 152 47 HOH TIP A . F 4 HOH 22 153 48 HOH TIP A . F 4 HOH 23 154 52 HOH TIP A . F 4 HOH 24 155 54 HOH TIP A . F 4 HOH 25 156 55 HOH TIP A . F 4 HOH 26 157 56 HOH TIP A . F 4 HOH 27 158 57 HOH TIP A . F 4 HOH 28 159 59 HOH TIP A . F 4 HOH 29 160 61 HOH TIP A . F 4 HOH 30 161 64 HOH TIP A . F 4 HOH 31 162 66 HOH TIP A . F 4 HOH 32 163 67 HOH TIP A . F 4 HOH 33 164 73 HOH TIP A . F 4 HOH 34 165 74 HOH TIP A . F 4 HOH 35 166 78 HOH TIP A . F 4 HOH 36 167 82 HOH TIP A . F 4 HOH 37 168 83 HOH TIP A . F 4 HOH 38 169 87 HOH TIP A . F 4 HOH 39 170 88 HOH TIP A . F 4 HOH 40 171 89 HOH TIP A . F 4 HOH 41 172 90 HOH TIP A . F 4 HOH 42 173 92 HOH TIP A . F 4 HOH 43 174 97 HOH TIP A . F 4 HOH 44 175 98 HOH TIP A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # _cell.entry_id 1HLV _cell.length_a 83.374 _cell.length_b 83.374 _cell.length_c 139.021 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1HLV _symmetry.space_group_name_H-M 'P 31 1 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 151 # _exptl.entry_id 1HLV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.88 _exptl_crystal.density_percent_sol 74.80 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'MPD, potassium cacodylate, magnesium chloride, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MPD ? ? ? 1 2 1 'potassium cacodylate' ? ? ? 1 3 1 MgCl2 ? ? ? 1 4 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1999-12-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44B2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 # _reflns.entry_id 1HLV _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 40 _reflns.d_resolution_high 2.5 _reflns.number_obs 19313 _reflns.number_all 19313 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.0450000 _reflns.pdbx_Rsym_value 0.0450000 _reflns.pdbx_netI_over_sigmaI 13.9 _reflns.B_iso_Wilson_estimate 58.195 _reflns.pdbx_redundancy 20.9 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 99.80 _reflns_shell.Rmerge_I_obs 0.2160000 _reflns_shell.pdbx_Rsym_value 0.2160000 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1HLV _refine.ls_number_reflns_obs 19313 _refine.ls_number_reflns_all 19313 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 30 _refine.ls_d_res_high 2.5 _refine.ls_percent_reflns_obs 99.5 _refine.ls_R_factor_obs 0.2219000 _refine.ls_R_factor_all 0.2219000 _refine.ls_R_factor_R_work 0.2219000 _refine.ls_R_factor_R_free 0.2599000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 940 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 45.8703 _refine.aniso_B[1][1] -5.82 _refine.aniso_B[2][2] -5.820 _refine.aniso_B[3][3] 11.639 _refine.aniso_B[1][2] -4.385 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1HLV _refine_analyze.Luzzati_coordinate_error_obs 0.35 _refine_analyze.Luzzati_sigma_a_obs 0.36 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.41 _refine_analyze.Luzzati_sigma_a_free 0.39 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1066 _refine_hist.pdbx_number_atoms_nucleic_acid 855 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 98 _refine_hist.number_atoms_total 2019 _refine_hist.d_res_high 2.5 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.07324 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.005558 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 18.42049 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.27355 ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all . 2.5 2.59 . 0.3484000 0.976 0.3931000 . . 87 . 'X-RAY DIFFRACTION' . . . 2.59 2.69 . 0.3204000 0.998 0.3440000 . . 104 . 'X-RAY DIFFRACTION' . . . 2.69 2.82 . 0.2793000 0.9953 0.3053000 . . 86 . 'X-RAY DIFFRACTION' . . . 2.82 2.96 . 0.3077000 0.9985 0.3659000 . . 97 . 'X-RAY DIFFRACTION' . . . 2.96 3.15 . 0.2693000 0.999 0.3268000 . . 85 . 'X-RAY DIFFRACTION' . . . 3.15 3.39 . 0.2201000 0.9985 0.2568000 . . 105 . 'X-RAY DIFFRACTION' . . . 3.39 3.73 . 0.2454000 1.000 0.2872000 . . 95 . 'X-RAY DIFFRACTION' . . . 3.73 4.27 . 0.2013000 1.000 0.2163000 . . 97 . 'X-RAY DIFFRACTION' . . . 4.27 5.38 . 0.1788000 0.9994 0.2383000 . . 86 . 'X-RAY DIFFRACTION' . . . 5.38 30.0 . 0.1723000 0.9896 0.2027000 . . 98 . 'X-RAY DIFFRACTION' . . # _database_PDB_matrix.entry_id 1HLV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1HLV _struct.title 'CRYSTAL STRUCTURE OF CENP-B(1-129) COMPLEXED WITH THE CENP-B BOX DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1HLV _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text ;HELIX-TURN-HELIX, PROTEIN-DNA COMPLEX, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, DNA BINDING PROTEIN-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP CENPB_HUMAN 3 ;MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSPYDKLEGL LIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWLDRFRRR ; 1 P07199 ? 2 PDB 1HLV 1 ? ? 1HLV ? 3 PDB 1HLV 2 ? ? 1HLV ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1HLV A 1 ? 129 ? P07199 1 ? 129 ? 1 129 2 2 1HLV B 1 ? 21 ? 1HLV 1 ? 21 ? 1 21 3 3 1HLV C 1 ? 21 ? 1HLV 1 ? 21 ? 1 21 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1HLV ARG A 130 ? UNP P07199 ? ? 'cloning artifact' 130 1 1 1HLV SER A 131 ? UNP P07199 ? ? 'cloning artifact' 131 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 9 ? ASN C 23 ? THR A 9 ASN A 23 1 ? 15 HELX_P HELX_P2 2 ARG C 27 ? ASN C 36 ? ARG A 27 ASN A 36 1 ? 10 HELX_P HELX_P3 3 PRO C 38 ? ASN C 48 ? PRO A 38 ASN A 48 1 ? 11 HELX_P HELX_P4 4 ASN C 48 ? GLY C 60 ? ASN A 48 GLY A 60 1 ? 13 HELX_P HELX_P5 5 VAL C 61 ? CYS C 65 ? VAL A 61 CYS A 65 5 ? 5 HELX_P HELX_P6 6 TYR C 74 ? ARG C 89 ? TYR A 74 ARG A 89 1 ? 16 HELX_P HELX_P7 7 ALA C 90 ? GLY C 92 ? ALA A 90 GLY A 92 5 ? 3 HELX_P HELX_P8 8 LYS C 96 ? GLY C 112 ? LYS A 96 GLY A 112 1 ? 17 HELX_P HELX_P9 9 SER C 119 ? ARG C 130 ? SER A 119 ARG A 130 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 21 N3 ? ? B DG 1 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 21 O2 ? ? B DG 1 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 21 N4 ? ? B DG 1 C DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 20 N1 ? ? B DC 2 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 20 O6 ? ? B DC 2 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 20 N2 ? ? B DC 2 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 19 N1 ? ? B DC 3 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 19 O6 ? ? B DC 3 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 19 N2 ? ? B DC 3 C DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 18 N1 ? ? B DT 4 C DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 18 N6 ? ? B DT 4 C DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 17 N1 ? ? B DT 5 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 17 N6 ? ? B DT 5 C DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 16 N1 ? ? B DC 6 C DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 16 O6 ? ? B DC 6 C DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 16 N2 ? ? B DC 6 C DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 15 N3 ? ? B DG 7 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 15 O2 ? ? B DG 7 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 15 N4 ? ? B DG 7 C DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 14 N1 ? ? B DT 8 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 14 N6 ? ? B DT 8 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 13 N1 ? ? B DT 9 C DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 13 N6 ? ? B DT 9 C DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 12 N3 ? ? B DG 10 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 12 O2 ? ? B DG 10 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 12 N4 ? ? B DG 10 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 11 N3 ? ? B DG 11 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 11 O2 ? ? B DG 11 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 11 N4 ? ? B DG 11 C DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 10 N3 ? ? B DA 12 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 10 O4 ? ? B DA 12 C DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 9 N3 ? ? B DA 13 C DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 9 O4 ? ? B DA 13 C DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 8 N3 ? ? B DA 14 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 8 O4 ? ? B DA 14 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 15 N3 ? ? ? 1_555 B DG 7 N1 ? ? B DC 15 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 15 N4 ? ? ? 1_555 B DG 7 O6 ? ? B DC 15 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 15 O2 ? ? ? 1_555 B DG 7 N2 ? ? B DC 15 C DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 6 N3 ? ? B DG 16 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 6 O2 ? ? B DG 16 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 6 N4 ? ? B DG 16 C DC 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 17 N1 ? ? ? 1_555 B DC 5 N3 ? ? B DG 17 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 17 N2 ? ? ? 1_555 B DC 5 O2 ? ? B DG 17 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DG 17 O6 ? ? ? 1_555 B DC 5 N4 ? ? B DG 17 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 18 N1 ? ? ? 1_555 B DC 4 N3 ? ? B DG 18 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DG 18 N2 ? ? ? 1_555 B DC 4 O2 ? ? B DG 18 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DG 18 O6 ? ? ? 1_555 B DC 4 N4 ? ? B DG 18 C DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DA 19 N1 ? ? ? 1_555 B DT 3 N3 ? ? B DA 19 C DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DA 19 N6 ? ? ? 1_555 B DT 3 O4 ? ? B DA 19 C DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DT 20 N3 ? ? ? 1_555 B DA 2 N1 ? ? B DT 20 C DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DT 20 O4 ? ? ? 1_555 B DA 2 N6 ? ? B DT 20 C DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DT 21 N3 ? ? ? 1_555 B DA 1 N1 ? ? B DT 21 C DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DT 21 O4 ? ? ? 1_555 B DA 1 N6 ? ? B DT 21 C DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 69 ? ? -90.35 41.50 2 1 SER A 119 ? ? -46.69 155.89 3 1 ARG A 129 ? ? -67.15 -82.01 4 1 ARG A 130 ? ? -57.97 -7.33 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG B 10 ? ? 0.057 'SIDE CHAIN' 2 1 DA C 14 ? ? 0.073 'SIDE CHAIN' # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HOH O O N N 280 HOH H1 H N N 281 HOH H2 H N N 282 ILE N N N N 283 ILE CA C N S 284 ILE C C N N 285 ILE O O N N 286 ILE CB C N S 287 ILE CG1 C N N 288 ILE CG2 C N N 289 ILE CD1 C N N 290 ILE OXT O N N 291 ILE H H N N 292 ILE H2 H N N 293 ILE HA H N N 294 ILE HB H N N 295 ILE HG12 H N N 296 ILE HG13 H N N 297 ILE HG21 H N N 298 ILE HG22 H N N 299 ILE HG23 H N N 300 ILE HD11 H N N 301 ILE HD12 H N N 302 ILE HD13 H N N 303 ILE HXT H N N 304 LEU N N N N 305 LEU CA C N S 306 LEU C C N N 307 LEU O O N N 308 LEU CB C N N 309 LEU CG C N N 310 LEU CD1 C N N 311 LEU CD2 C N N 312 LEU OXT O N N 313 LEU H H N N 314 LEU H2 H N N 315 LEU HA H N N 316 LEU HB2 H N N 317 LEU HB3 H N N 318 LEU HG H N N 319 LEU HD11 H N N 320 LEU HD12 H N N 321 LEU HD13 H N N 322 LEU HD21 H N N 323 LEU HD22 H N N 324 LEU HD23 H N N 325 LEU HXT H N N 326 LYS N N N N 327 LYS CA C N S 328 LYS C C N N 329 LYS O O N N 330 LYS CB C N N 331 LYS CG C N N 332 LYS CD C N N 333 LYS CE C N N 334 LYS NZ N N N 335 LYS OXT O N N 336 LYS H H N N 337 LYS H2 H N N 338 LYS HA H N N 339 LYS HB2 H N N 340 LYS HB3 H N N 341 LYS HG2 H N N 342 LYS HG3 H N N 343 LYS HD2 H N N 344 LYS HD3 H N N 345 LYS HE2 H N N 346 LYS HE3 H N N 347 LYS HZ1 H N N 348 LYS HZ2 H N N 349 LYS HZ3 H N N 350 LYS HXT H N N 351 MET N N N N 352 MET CA C N S 353 MET C C N N 354 MET O O N N 355 MET CB C N N 356 MET CG C N N 357 MET SD S N N 358 MET CE C N N 359 MET OXT O N N 360 MET H H N N 361 MET H2 H N N 362 MET HA H N N 363 MET HB2 H N N 364 MET HB3 H N N 365 MET HG2 H N N 366 MET HG3 H N N 367 MET HE1 H N N 368 MET HE2 H N N 369 MET HE3 H N N 370 MET HXT H N N 371 PHE N N N N 372 PHE CA C N S 373 PHE C C N N 374 PHE O O N N 375 PHE CB C N N 376 PHE CG C Y N 377 PHE CD1 C Y N 378 PHE CD2 C Y N 379 PHE CE1 C Y N 380 PHE CE2 C Y N 381 PHE CZ C Y N 382 PHE OXT O N N 383 PHE H H N N 384 PHE H2 H N N 385 PHE HA H N N 386 PHE HB2 H N N 387 PHE HB3 H N N 388 PHE HD1 H N N 389 PHE HD2 H N N 390 PHE HE1 H N N 391 PHE HE2 H N N 392 PHE HZ H N N 393 PHE HXT H N N 394 PRO N N N N 395 PRO CA C N S 396 PRO C C N N 397 PRO O O N N 398 PRO CB C N N 399 PRO CG C N N 400 PRO CD C N N 401 PRO OXT O N N 402 PRO H H N N 403 PRO HA H N N 404 PRO HB2 H N N 405 PRO HB3 H N N 406 PRO HG2 H N N 407 PRO HG3 H N N 408 PRO HD2 H N N 409 PRO HD3 H N N 410 PRO HXT H N N 411 SER N N N N 412 SER CA C N S 413 SER C C N N 414 SER O O N N 415 SER CB C N N 416 SER OG O N N 417 SER OXT O N N 418 SER H H N N 419 SER H2 H N N 420 SER HA H N N 421 SER HB2 H N N 422 SER HB3 H N N 423 SER HG H N N 424 SER HXT H N N 425 THR N N N N 426 THR CA C N S 427 THR C C N N 428 THR O O N N 429 THR CB C N R 430 THR OG1 O N N 431 THR CG2 C N N 432 THR OXT O N N 433 THR H H N N 434 THR H2 H N N 435 THR HA H N N 436 THR HB H N N 437 THR HG1 H N N 438 THR HG21 H N N 439 THR HG22 H N N 440 THR HG23 H N N 441 THR HXT H N N 442 TRP N N N N 443 TRP CA C N S 444 TRP C C N N 445 TRP O O N N 446 TRP CB C N N 447 TRP CG C Y N 448 TRP CD1 C Y N 449 TRP CD2 C Y N 450 TRP NE1 N Y N 451 TRP CE2 C Y N 452 TRP CE3 C Y N 453 TRP CZ2 C Y N 454 TRP CZ3 C Y N 455 TRP CH2 C Y N 456 TRP OXT O N N 457 TRP H H N N 458 TRP H2 H N N 459 TRP HA H N N 460 TRP HB2 H N N 461 TRP HB3 H N N 462 TRP HD1 H N N 463 TRP HE1 H N N 464 TRP HE3 H N N 465 TRP HZ2 H N N 466 TRP HZ3 H N N 467 TRP HH2 H N N 468 TRP HXT H N N 469 TYR N N N N 470 TYR CA C N S 471 TYR C C N N 472 TYR O O N N 473 TYR CB C N N 474 TYR CG C Y N 475 TYR CD1 C Y N 476 TYR CD2 C Y N 477 TYR CE1 C Y N 478 TYR CE2 C Y N 479 TYR CZ C Y N 480 TYR OH O N N 481 TYR OXT O N N 482 TYR H H N N 483 TYR H2 H N N 484 TYR HA H N N 485 TYR HB2 H N N 486 TYR HB3 H N N 487 TYR HD1 H N N 488 TYR HD2 H N N 489 TYR HE1 H N N 490 TYR HE2 H N N 491 TYR HH H N N 492 TYR HXT H N N 493 VAL N N N N 494 VAL CA C N S 495 VAL C C N N 496 VAL O O N N 497 VAL CB C N N 498 VAL CG1 C N N 499 VAL CG2 C N N 500 VAL OXT O N N 501 VAL H H N N 502 VAL H2 H N N 503 VAL HA H N N 504 VAL HB H N N 505 VAL HG11 H N N 506 VAL HG12 H N N 507 VAL HG13 H N N 508 VAL HG21 H N N 509 VAL HG22 H N N 510 VAL HG23 H N N 511 VAL HXT H N N 512 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HOH O H1 sing N N 278 HOH O H2 sing N N 279 ILE N CA sing N N 280 ILE N H sing N N 281 ILE N H2 sing N N 282 ILE CA C sing N N 283 ILE CA CB sing N N 284 ILE CA HA sing N N 285 ILE C O doub N N 286 ILE C OXT sing N N 287 ILE CB CG1 sing N N 288 ILE CB CG2 sing N N 289 ILE CB HB sing N N 290 ILE CG1 CD1 sing N N 291 ILE CG1 HG12 sing N N 292 ILE CG1 HG13 sing N N 293 ILE CG2 HG21 sing N N 294 ILE CG2 HG22 sing N N 295 ILE CG2 HG23 sing N N 296 ILE CD1 HD11 sing N N 297 ILE CD1 HD12 sing N N 298 ILE CD1 HD13 sing N N 299 ILE OXT HXT sing N N 300 LEU N CA sing N N 301 LEU N H sing N N 302 LEU N H2 sing N N 303 LEU CA C sing N N 304 LEU CA CB sing N N 305 LEU CA HA sing N N 306 LEU C O doub N N 307 LEU C OXT sing N N 308 LEU CB CG sing N N 309 LEU CB HB2 sing N N 310 LEU CB HB3 sing N N 311 LEU CG CD1 sing N N 312 LEU CG CD2 sing N N 313 LEU CG HG sing N N 314 LEU CD1 HD11 sing N N 315 LEU CD1 HD12 sing N N 316 LEU CD1 HD13 sing N N 317 LEU CD2 HD21 sing N N 318 LEU CD2 HD22 sing N N 319 LEU CD2 HD23 sing N N 320 LEU OXT HXT sing N N 321 LYS N CA sing N N 322 LYS N H sing N N 323 LYS N H2 sing N N 324 LYS CA C sing N N 325 LYS CA CB sing N N 326 LYS CA HA sing N N 327 LYS C O doub N N 328 LYS C OXT sing N N 329 LYS CB CG sing N N 330 LYS CB HB2 sing N N 331 LYS CB HB3 sing N N 332 LYS CG CD sing N N 333 LYS CG HG2 sing N N 334 LYS CG HG3 sing N N 335 LYS CD CE sing N N 336 LYS CD HD2 sing N N 337 LYS CD HD3 sing N N 338 LYS CE NZ sing N N 339 LYS CE HE2 sing N N 340 LYS CE HE3 sing N N 341 LYS NZ HZ1 sing N N 342 LYS NZ HZ2 sing N N 343 LYS NZ HZ3 sing N N 344 LYS OXT HXT sing N N 345 MET N CA sing N N 346 MET N H sing N N 347 MET N H2 sing N N 348 MET CA C sing N N 349 MET CA CB sing N N 350 MET CA HA sing N N 351 MET C O doub N N 352 MET C OXT sing N N 353 MET CB CG sing N N 354 MET CB HB2 sing N N 355 MET CB HB3 sing N N 356 MET CG SD sing N N 357 MET CG HG2 sing N N 358 MET CG HG3 sing N N 359 MET SD CE sing N N 360 MET CE HE1 sing N N 361 MET CE HE2 sing N N 362 MET CE HE3 sing N N 363 MET OXT HXT sing N N 364 PHE N CA sing N N 365 PHE N H sing N N 366 PHE N H2 sing N N 367 PHE CA C sing N N 368 PHE CA CB sing N N 369 PHE CA HA sing N N 370 PHE C O doub N N 371 PHE C OXT sing N N 372 PHE CB CG sing N N 373 PHE CB HB2 sing N N 374 PHE CB HB3 sing N N 375 PHE CG CD1 doub Y N 376 PHE CG CD2 sing Y N 377 PHE CD1 CE1 sing Y N 378 PHE CD1 HD1 sing N N 379 PHE CD2 CE2 doub Y N 380 PHE CD2 HD2 sing N N 381 PHE CE1 CZ doub Y N 382 PHE CE1 HE1 sing N N 383 PHE CE2 CZ sing Y N 384 PHE CE2 HE2 sing N N 385 PHE CZ HZ sing N N 386 PHE OXT HXT sing N N 387 PRO N CA sing N N 388 PRO N CD sing N N 389 PRO N H sing N N 390 PRO CA C sing N N 391 PRO CA CB sing N N 392 PRO CA HA sing N N 393 PRO C O doub N N 394 PRO C OXT sing N N 395 PRO CB CG sing N N 396 PRO CB HB2 sing N N 397 PRO CB HB3 sing N N 398 PRO CG CD sing N N 399 PRO CG HG2 sing N N 400 PRO CG HG3 sing N N 401 PRO CD HD2 sing N N 402 PRO CD HD3 sing N N 403 PRO OXT HXT sing N N 404 SER N CA sing N N 405 SER N H sing N N 406 SER N H2 sing N N 407 SER CA C sing N N 408 SER CA CB sing N N 409 SER CA HA sing N N 410 SER C O doub N N 411 SER C OXT sing N N 412 SER CB OG sing N N 413 SER CB HB2 sing N N 414 SER CB HB3 sing N N 415 SER OG HG sing N N 416 SER OXT HXT sing N N 417 THR N CA sing N N 418 THR N H sing N N 419 THR N H2 sing N N 420 THR CA C sing N N 421 THR CA CB sing N N 422 THR CA HA sing N N 423 THR C O doub N N 424 THR C OXT sing N N 425 THR CB OG1 sing N N 426 THR CB CG2 sing N N 427 THR CB HB sing N N 428 THR OG1 HG1 sing N N 429 THR CG2 HG21 sing N N 430 THR CG2 HG22 sing N N 431 THR CG2 HG23 sing N N 432 THR OXT HXT sing N N 433 TRP N CA sing N N 434 TRP N H sing N N 435 TRP N H2 sing N N 436 TRP CA C sing N N 437 TRP CA CB sing N N 438 TRP CA HA sing N N 439 TRP C O doub N N 440 TRP C OXT sing N N 441 TRP CB CG sing N N 442 TRP CB HB2 sing N N 443 TRP CB HB3 sing N N 444 TRP CG CD1 doub Y N 445 TRP CG CD2 sing Y N 446 TRP CD1 NE1 sing Y N 447 TRP CD1 HD1 sing N N 448 TRP CD2 CE2 doub Y N 449 TRP CD2 CE3 sing Y N 450 TRP NE1 CE2 sing Y N 451 TRP NE1 HE1 sing N N 452 TRP CE2 CZ2 sing Y N 453 TRP CE3 CZ3 doub Y N 454 TRP CE3 HE3 sing N N 455 TRP CZ2 CH2 doub Y N 456 TRP CZ2 HZ2 sing N N 457 TRP CZ3 CH2 sing Y N 458 TRP CZ3 HZ3 sing N N 459 TRP CH2 HH2 sing N N 460 TRP OXT HXT sing N N 461 TYR N CA sing N N 462 TYR N H sing N N 463 TYR N H2 sing N N 464 TYR CA C sing N N 465 TYR CA CB sing N N 466 TYR CA HA sing N N 467 TYR C O doub N N 468 TYR C OXT sing N N 469 TYR CB CG sing N N 470 TYR CB HB2 sing N N 471 TYR CB HB3 sing N N 472 TYR CG CD1 doub Y N 473 TYR CG CD2 sing Y N 474 TYR CD1 CE1 sing Y N 475 TYR CD1 HD1 sing N N 476 TYR CD2 CE2 doub Y N 477 TYR CD2 HD2 sing N N 478 TYR CE1 CZ doub Y N 479 TYR CE1 HE1 sing N N 480 TYR CE2 CZ sing Y N 481 TYR CE2 HE2 sing N N 482 TYR CZ OH sing N N 483 TYR OH HH sing N N 484 TYR OXT HXT sing N N 485 VAL N CA sing N N 486 VAL N H sing N N 487 VAL N H2 sing N N 488 VAL CA C sing N N 489 VAL CA CB sing N N 490 VAL CA HA sing N N 491 VAL C O doub N N 492 VAL C OXT sing N N 493 VAL CB CG1 sing N N 494 VAL CB CG2 sing N N 495 VAL CB HB sing N N 496 VAL CG1 HG11 sing N N 497 VAL CG1 HG12 sing N N 498 VAL CG1 HG13 sing N N 499 VAL CG2 HG21 sing N N 500 VAL CG2 HG22 sing N N 501 VAL CG2 HG23 sing N N 502 VAL OXT HXT sing N N 503 # _ndb_struct_conf_na.entry_id 1HLV _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 21 1_555 0.243 -0.002 -0.027 -1.860 -3.827 1.229 1 B_DG1:DC21_C B 1 ? C 21 ? 19 1 1 A DC 2 1_555 B DG 20 1_555 0.213 -0.004 0.377 -3.219 -6.262 -3.607 2 B_DC2:DG20_C B 2 ? C 20 ? 19 1 1 A DC 3 1_555 B DG 19 1_555 -0.156 0.003 0.183 1.752 -4.512 -0.611 3 B_DC3:DG19_C B 3 ? C 19 ? 19 1 1 A DT 4 1_555 B DA 18 1_555 -0.622 -0.288 0.076 1.313 -10.697 -3.581 4 B_DT4:DA18_C B 4 ? C 18 ? 20 1 1 A DT 5 1_555 B DA 17 1_555 -0.481 -0.157 -0.053 1.788 -15.926 -6.774 5 B_DT5:DA17_C B 5 ? C 17 ? 20 1 1 A DC 6 1_555 B DG 16 1_555 0.167 -0.243 0.114 -6.416 -9.697 -0.798 6 B_DC6:DG16_C B 6 ? C 16 ? 19 1 1 A DG 7 1_555 B DC 15 1_555 -0.035 -0.057 -0.216 -11.960 -6.879 1.847 7 B_DG7:DC15_C B 7 ? C 15 ? 19 1 1 A DT 8 1_555 B DA 14 1_555 -0.150 -0.117 0.020 -1.289 -8.979 1.368 8 B_DT8:DA14_C B 8 ? C 14 ? 20 1 1 A DT 9 1_555 B DA 13 1_555 -0.042 -0.266 -0.151 7.016 -2.675 2.558 9 B_DT9:DA13_C B 9 ? C 13 ? 20 1 1 A DG 10 1_555 B DC 12 1_555 0.116 -0.011 0.520 8.114 -12.878 1.201 10 B_DG10:DC12_C B 10 ? C 12 ? 19 1 1 A DG 11 1_555 B DC 11 1_555 -0.212 -0.145 -0.056 5.623 2.063 -0.844 11 B_DG11:DC11_C B 11 ? C 11 ? 19 1 1 A DA 12 1_555 B DT 10 1_555 -0.171 0.004 -0.087 9.183 -11.571 -3.639 12 B_DA12:DT10_C B 12 ? C 10 ? 20 1 1 A DA 13 1_555 B DT 9 1_555 0.417 -0.023 -0.090 9.068 -9.801 0.249 13 B_DA13:DT9_C B 13 ? C 9 ? 20 1 1 A DA 14 1_555 B DT 8 1_555 -0.081 -0.049 -0.387 -7.521 -16.198 9.099 14 B_DA14:DT8_C B 14 ? C 8 ? 20 1 1 A DC 15 1_555 B DG 7 1_555 0.113 -0.028 -0.011 -10.523 -7.365 0.545 15 B_DC15:DG7_C B 15 ? C 7 ? 19 1 1 A DG 16 1_555 B DC 6 1_555 -0.438 -0.210 -0.017 4.010 0.793 -1.479 16 B_DG16:DC6_C B 16 ? C 6 ? 19 1 1 A DG 17 1_555 B DC 5 1_555 0.012 -0.031 0.408 23.658 1.974 -1.351 17 B_DG17:DC5_C B 17 ? C 5 ? 19 1 1 A DG 18 1_555 B DC 4 1_555 -0.346 -0.001 0.431 14.953 -17.576 -1.470 18 B_DG18:DC4_C B 18 ? C 4 ? 19 1 1 A DA 19 1_555 B DT 3 1_555 -0.268 -0.115 0.441 1.097 -17.945 8.928 19 B_DA19:DT3_C B 19 ? C 3 ? 20 1 1 A DT 20 1_555 B DA 2 1_555 0.234 0.070 0.504 -5.282 -21.094 4.412 20 B_DT20:DA2_C B 20 ? C 2 ? 20 1 1 A DT 21 1_555 B DA 1 1_555 -0.275 0.083 0.065 -11.641 -22.066 -2.472 21 B_DT21:DA1_C B 21 ? C 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 21 1_555 A DC 2 1_555 B DG 20 1_555 -0.739 -0.355 3.317 -2.936 0.252 35.974 -0.610 0.769 3.362 0.407 4.744 36.091 1 BB_DG1DC2:DG20DC21_CC B 1 ? C 21 ? B 2 ? C 20 ? 1 A DC 2 1_555 B DG 20 1_555 A DC 3 1_555 B DG 19 1_555 0.808 -0.172 3.167 3.371 3.048 32.871 -0.802 -0.862 3.203 5.354 -5.922 33.175 2 BB_DC2DC3:DG19DG20_CC B 2 ? C 20 ? B 3 ? C 19 ? 1 A DC 3 1_555 B DG 19 1_555 A DT 4 1_555 B DA 18 1_555 -0.469 -0.303 3.270 0.701 1.597 28.166 -0.992 1.124 3.236 3.277 -1.438 28.218 3 BB_DC3DT4:DA18DG19_CC B 3 ? C 19 ? B 4 ? C 18 ? 1 A DT 4 1_555 B DA 18 1_555 A DT 5 1_555 B DA 17 1_555 -0.588 -0.282 3.214 -0.880 2.081 36.311 -0.736 0.822 3.206 3.336 1.410 36.379 4 BB_DT4DT5:DA17DA18_CC B 4 ? C 18 ? B 5 ? C 17 ? 1 A DT 5 1_555 B DA 17 1_555 A DC 6 1_555 B DG 16 1_555 0.455 0.684 3.496 0.595 1.819 44.940 0.719 -0.537 3.525 2.378 -0.778 44.978 5 BB_DT5DC6:DG16DA17_CC B 5 ? C 17 ? B 6 ? C 16 ? 1 A DC 6 1_555 B DG 16 1_555 A DG 7 1_555 B DC 15 1_555 1.016 1.093 3.366 4.243 6.712 36.036 0.749 -0.987 3.597 10.690 -6.759 36.872 6 BB_DC6DG7:DC15DG16_CC B 6 ? C 16 ? B 7 ? C 15 ? 1 A DG 7 1_555 B DC 15 1_555 A DT 8 1_555 B DA 14 1_555 -0.279 0.672 3.135 -1.248 1.614 31.959 0.938 0.288 3.173 2.928 2.263 32.022 7 BB_DG7DT8:DA14DC15_CC B 7 ? C 15 ? B 8 ? C 14 ? 1 A DT 8 1_555 B DA 14 1_555 A DT 9 1_555 B DA 13 1_555 1.550 0.773 3.142 4.744 4.150 35.660 0.658 -1.825 3.380 6.713 -7.673 36.195 8 BB_DT8DT9:DA13DA14_CC B 8 ? C 14 ? B 9 ? C 13 ? 1 A DT 9 1_555 B DA 13 1_555 A DG 10 1_555 B DC 12 1_555 -0.996 0.890 3.355 -5.953 -3.792 42.389 1.605 0.749 3.370 -5.201 8.164 42.946 9 BB_DT9DG10:DC12DA13_CC B 9 ? C 13 ? B 10 ? C 12 ? 1 A DG 10 1_555 B DC 12 1_555 A DG 11 1_555 B DC 11 1_555 1.367 0.498 3.513 5.047 -6.245 35.024 1.782 -1.430 3.531 -10.211 -8.253 35.904 10 BB_DG10DG11:DC11DC12_CC B 10 ? C 12 ? B 11 ? C 11 ? 1 A DG 11 1_555 B DC 11 1_555 A DA 12 1_555 B DT 10 1_555 -1.200 0.489 3.289 -1.629 0.528 37.958 0.683 1.633 3.342 0.812 2.504 37.995 11 BB_DG11DA12:DT10DC11_CC B 11 ? C 11 ? B 12 ? C 10 ? 1 A DA 12 1_555 B DT 10 1_555 A DA 13 1_555 B DT 9 1_555 0.638 -0.352 3.310 -0.623 1.793 32.187 -0.955 -1.261 3.273 3.231 1.123 32.242 12 BB_DA12DA13:DT9DT10_CC B 12 ? C 10 ? B 13 ? C 9 ? 1 A DA 13 1_555 B DT 9 1_555 A DA 14 1_555 B DT 8 1_555 -0.185 -0.144 3.588 -4.060 -2.549 40.033 0.108 -0.237 3.591 -3.707 5.905 40.307 13 BB_DA13DA14:DT8DT9_CC B 13 ? C 9 ? B 14 ? C 8 ? 1 A DA 14 1_555 B DT 8 1_555 A DC 15 1_555 B DG 7 1_555 -0.820 -1.034 3.321 -4.368 7.646 30.594 -3.280 0.700 3.064 14.127 8.070 31.807 14 BB_DA14DC15:DG7DT8_CC B 14 ? C 8 ? B 15 ? C 7 ? 1 A DC 15 1_555 B DG 7 1_555 A DG 16 1_555 B DC 6 1_555 0.363 1.114 3.213 6.191 6.201 31.624 0.879 0.450 3.374 11.114 -11.097 32.785 15 BB_DC15DG16:DC6DG7_CC B 15 ? C 7 ? B 16 ? C 6 ? 1 A DG 16 1_555 B DC 6 1_555 A DG 17 1_555 B DC 5 1_555 0.440 0.576 2.931 -2.644 12.204 23.068 -1.822 -1.642 2.807 28.035 6.075 26.191 16 BB_DG16DG17:DC5DC6_CC B 16 ? C 6 ? B 17 ? C 5 ? 1 A DG 17 1_555 B DC 5 1_555 A DG 18 1_555 B DC 4 1_555 -0.361 0.124 3.578 1.004 -0.079 37.044 0.207 0.714 3.567 -0.124 -1.579 37.058 17 BB_DG17DG18:DC4DC5_CC B 17 ? C 5 ? B 18 ? C 4 ? 1 A DG 18 1_555 B DC 4 1_555 A DA 19 1_555 B DT 3 1_555 0.315 -0.475 3.477 -1.547 -0.135 39.927 -0.679 -0.650 3.465 -0.198 2.264 39.956 18 BB_DG18DA19:DT3DC4_CC B 18 ? C 4 ? B 19 ? C 3 ? 1 A DA 19 1_555 B DT 3 1_555 A DT 20 1_555 B DA 2 1_555 -0.313 -0.611 3.281 -1.265 1.797 36.243 -1.232 0.326 3.257 2.886 2.032 36.307 19 BB_DA19DT20:DA2DT3_CC B 19 ? C 3 ? B 20 ? C 2 ? 1 A DT 20 1_555 B DA 2 1_555 A DT 21 1_555 B DA 1 1_555 -0.670 -0.061 3.162 1.476 2.022 34.655 -0.399 1.339 3.123 3.390 -2.474 34.742 20 BB_DT20DT21:DA1DA2_CC B 20 ? C 2 ? B 21 ? C 1 ? # _atom_sites.entry_id 1HLV _atom_sites.fract_transf_matrix[1][1] 0.011994 _atom_sites.fract_transf_matrix[1][2] 0.006925 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013850 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007193 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_