data_1I5K # _entry.id 1I5K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1I5K pdb_00001i5k 10.2210/pdb1i5k/pdb RCSB RCSB012931 ? ? WWPDB D_1000012931 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1I5K _pdbx_database_status.recvd_initial_deposition_date 2001-02-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rios-Steiner, J.L.' 1 'Schenone, M.' 2 'Mochalkin, I.' 3 'Tulinsky, A.' 4 'Castellino, F.J.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Structure and binding determinants of the recombinant kringle-2 domain of human plasminogen to an internal peptide from a group A Streptococcal surface protein. ; J.Mol.Biol. 308 705 719 2001 JMOBAK UK 0022-2836 0070 ? 11350170 10.1006/jmbi.2001.4646 1 'Structure and ligand binding determinants of the recombinant kringle 5 domain of human plasminogen.' Biochemistry 37 3258 3271 1998 BICHAW US 0006-2960 0033 ? ? 10.1021/bi972284e 2 'The refined structure of the epsilon-aminocaproic acid complex of human plasminogen kringle 4.' Biochemistry 30 10589 10594 1991 BICHAW US 0006-2960 0033 ? ? ? 3 'Kringle 2 mediates high affinity binding of plasminogen to an internal sequence in streptococcal surface protein PAM.' J.Biol.Chem. 273 24420 24424 1998 JBCHA3 US 0021-9258 0071 ? ? 10.1074/jbc.273.38.24420 4 ;Enhancement trough mutagenesis of the binding of the isolated kringle 2 domain of human plasminogen to omega-amino acid ligands and to an internal sequence of a Streptococcal surface protein. ; J.Biol.Chem. 274 22380 22386 1999 JBCHA3 US 0021-9258 0071 ? ? 10.1074/jbc.274.32.22380 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rios-Steiner, J.L.' 1 ? primary 'Schenone, M.' 2 ? primary 'Mochalkin, I.' 3 ? primary 'Tulinsky, A.' 4 ? primary 'Castellino, F.J.' 5 ? 1 'Chang, Y.' 6 ? 1 'Mochalkin, I.' 7 ? 1 'McCance, S.G.' 8 ? 1 'Cheng, B.' 9 ? 1 'Tulinsky, A.' 10 ? 1 'Castellino, F.J.' 11 ? 2 'Wu, T.P.' 12 ? 2 'Padmanabhan, K.' 13 ? 2 'Tulinsky, A.' 14 ? 2 'Mulichak, A.M.' 15 ? 3 'Wistedt, A.C.' 16 ? 3 'Kotarsky, H.' 17 ? 3 'Marti, D.' 18 ? 3 'Ringdahl, U.' 19 ? 3 'Castellino, F.J.' 20 ? 3 'Schaller, J.' 21 ? 3 'Sjobring, U.' 22 ? 4 'Nilsen, S.L.' 23 ? 4 'Prorok, M.' 24 ? 4 'Castellino, F.J.' 25 ? # _cell.entry_id 1I5K _cell.length_a 91.98 _cell.length_b 91.98 _cell.length_c 151.779 _cell.angle_alpha 90.0 _cell.angle_beta 90.0 _cell.angle_gamma 120.0 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1I5K _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man PLASMINOGEN 9774.923 2 3.4.21.7 C4G/E56D/L72Y 'MODIFIED RECOMBINANT KRINGLE-2 DOMAIN' ? 2 polymer syn 'M PROTEIN' 3635.021 2 ? ? 'VEK-30 (30 RESIDUE INTERNAL PEPTIDE)' ? 3 water nat water 18.015 133 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;FSEECMHGSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNPDRDLRPWCFTTDPNKRWEYCDIP RCAA ; ;FSEECMHGSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNPDRDLRPWCFTTDPNKRWEYCDIP RCAA ; A,B ? 2 'polypeptide(L)' no no VEKLTADAELQRLKNERHEEAELERLKSEY VEKLTADAELQRLKNERHEEAELERLKSEY C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 SER n 1 3 GLU n 1 4 GLU n 1 5 CYS n 1 6 MET n 1 7 HIS n 1 8 GLY n 1 9 SER n 1 10 GLY n 1 11 GLU n 1 12 ASN n 1 13 TYR n 1 14 ASP n 1 15 GLY n 1 16 LYS n 1 17 ILE n 1 18 SER n 1 19 LYS n 1 20 THR n 1 21 MET n 1 22 SER n 1 23 GLY n 1 24 LEU n 1 25 GLU n 1 26 CYS n 1 27 GLN n 1 28 ALA n 1 29 TRP n 1 30 ASP n 1 31 SER n 1 32 GLN n 1 33 SER n 1 34 PRO n 1 35 HIS n 1 36 ALA n 1 37 HIS n 1 38 GLY n 1 39 TYR n 1 40 ILE n 1 41 PRO n 1 42 SER n 1 43 LYS n 1 44 PHE n 1 45 PRO n 1 46 ASN n 1 47 LYS n 1 48 ASN n 1 49 LEU n 1 50 LYS n 1 51 LYS n 1 52 ASN n 1 53 TYR n 1 54 CYS n 1 55 ARG n 1 56 ASN n 1 57 PRO n 1 58 ASP n 1 59 ARG n 1 60 ASP n 1 61 LEU n 1 62 ARG n 1 63 PRO n 1 64 TRP n 1 65 CYS n 1 66 PHE n 1 67 THR n 1 68 THR n 1 69 ASP n 1 70 PRO n 1 71 ASN n 1 72 LYS n 1 73 ARG n 1 74 TRP n 1 75 GLU n 1 76 TYR n 1 77 CYS n 1 78 ASP n 1 79 ILE n 1 80 PRO n 1 81 ARG n 1 82 CYS n 1 83 ALA n 1 84 ALA n 2 1 VAL n 2 2 GLU n 2 3 LYS n 2 4 LEU n 2 5 THR n 2 6 ALA n 2 7 ASP n 2 8 ALA n 2 9 GLU n 2 10 LEU n 2 11 GLN n 2 12 ARG n 2 13 LEU n 2 14 LYS n 2 15 ASN n 2 16 GLU n 2 17 ARG n 2 18 HIS n 2 19 GLU n 2 20 GLU n 2 21 ALA n 2 22 GLU n 2 23 LEU n 2 24 GLU n 2 25 ARG n 2 26 LEU n 2 27 LYS n 2 28 SER n 2 29 GLU n 2 30 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus Pichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'VEK-30 was synthesized by automated solid phase peptide synthesis' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP PLMN_HUMAN P00747 1 183 ? ? 2 UNP PAM_STRPY P49054 2 85 ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1I5K A 4 ? 84 ? P00747 183 ? 262 ? 0 80 2 1 1I5K B 4 ? 84 ? P00747 183 ? 262 ? 100 180 3 2 1I5K C 1 ? 30 ? P49054 85 ? 113 ? 301 330 4 2 1I5K D 1 ? 30 ? P49054 85 ? 113 ? 401 430 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1I5K PHE A 1 ? UNP P00747 ? ? 'cloning artifact' -3 1 1 1I5K SER A 2 ? UNP P00747 ? ? 'cloning artifact' -2 2 1 1I5K GLU A 3 ? UNP P00747 ? ? 'cloning artifact' -1 3 1 1I5K GLY A 8 ? UNP P00747 CYS 188 'engineered mutation' 4 4 1 1I5K ASP A 60 ? UNP P00747 GLU 240 'engineered mutation' 56 5 1 1I5K TYR A 76 ? UNP P00747 LEU 256 'engineered mutation' 72 6 1 1I5K ALA A 83 ? UNP P00747 THR 263 conflict 79 7 1 1I5K ALA A 84 ? UNP P00747 THR 264 conflict 80 8 2 1I5K PHE B 1 ? UNP P00747 ? ? 'cloning artifact' 97 9 2 1I5K SER B 2 ? UNP P00747 ? ? 'cloning artifact' 98 10 2 1I5K GLU B 3 ? UNP P00747 ? ? 'cloning artifact' 99 11 2 1I5K GLY B 8 ? UNP P00747 CYS 188 'engineered mutation' 104 12 2 1I5K ASP B 60 ? UNP P00747 GLU 240 'engineered mutation' 156 13 2 1I5K TYR B 76 ? UNP P00747 LEU 256 'engineered mutation' 172 14 2 1I5K ALA B 83 ? UNP P00747 THR 263 conflict 179 15 2 1I5K ALA B 84 ? UNP P00747 THR 264 conflict 180 16 3 1I5K TYR C 30 ? UNP P49054 ARG 114 conflict 330 17 4 1I5K TYR D 30 ? UNP P49054 ARG 114 conflict 430 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1I5K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.45 _exptl_crystal.density_percent_sol 64.38 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '23%(w/v) PEG 3350, 0.1 M Mes, 0.2 M Li2SO4, 2mM CaCl2, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2000-03-28 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Sagitally focused Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.039 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.039 # _reflns.entry_id 1I5K _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 2.7 _reflns.number_obs 73280 _reflns.number_all 74852 _reflns.percent_possible_obs 97.9 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20 _reflns.B_iso_Wilson_estimate 28 _reflns.pdbx_redundancy 6.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.80 _reflns_shell.percent_possible_all 84.3 _reflns_shell.Rmerge_I_obs 0.55 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy 4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 11063 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1I5K _refine.ls_number_reflns_obs 8667 _refine.ls_number_reflns_all 9144 _refine.pdbx_ls_sigma_I 3.0 _refine.pdbx_ls_sigma_F 1.5 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.7 _refine.ls_percent_reflns_obs 87.2 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.195 _refine.ls_R_factor_R_free 0.262 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 477 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'Using K4 Pg (PDB entry 1PK4)' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1737 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 133 _refine_hist.number_atoms_total 1870 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.02 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 2.0 ? ? ? 'X-RAY DIFFRACTION' ? 'B rmsd for bonded main chain' 1.2 ? ? ? 'X-RAY DIFFRACTION' ? 'B rmsd for side chain atoms' 1.8 ? ? ? 'X-RAY DIFFRACTION' ? 'B rmsd for angle main chain' 2.1 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1I5K _struct.title ;STRUCTURE AND BINDING DETERMINANTS OF THE RECOMBINANT KRINGLE-2 DOMAIN OF HUMAN PLASMINOGEN TO AN INTERNAL PEPTIDE FROM A GROUP A STREPTOCOCCAL SURFACE PROTEIN ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1I5K _struct_keywords.pdbx_keywords 'BLOOD CLOTTING' _struct_keywords.text 'Human Plasminogen Kringle-2, Kringles, VEK-30, BLOOD CLOTTING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # _struct_biol.id 1 _struct_biol.details ;The assembly in the assymetric unit constitutes a dimer of the monomeric complex of a Kringle-2:vek30 complex. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 44 ? ASN A 48 ? PHE A 40 ASN A 44 5 ? 5 HELX_P HELX_P2 2 ILE B 40 ? PHE B 44 ? ILE B 136 PHE B 140 5 ? 5 HELX_P HELX_P3 3 PHE B 44 ? ASN B 48 ? PHE B 140 ASN B 144 5 ? 5 HELX_P HELX_P4 4 THR C 5 ? LYS C 27 ? THR C 305 LYS C 327 1 ? 23 HELX_P HELX_P5 5 THR D 5 ? LYS D 27 ? THR D 405 LYS D 427 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 82 SG ? ? A CYS 1 A CYS 78 1_555 ? ? ? ? ? ? ? 2.015 ? ? disulf2 disulf ? ? A CYS 26 SG ? ? ? 1_555 A CYS 65 SG ? ? A CYS 22 A CYS 61 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf3 disulf ? ? A CYS 54 SG ? ? ? 1_555 A CYS 77 SG ? ? A CYS 50 A CYS 73 1_555 ? ? ? ? ? ? ? 2.050 ? ? disulf4 disulf ? ? B CYS 5 SG ? ? ? 1_555 B CYS 82 SG ? ? B CYS 101 B CYS 178 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf5 disulf ? ? B CYS 26 SG ? ? ? 1_555 B CYS 65 SG ? ? B CYS 122 B CYS 161 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf6 disulf ? ? B CYS 54 SG ? ? ? 1_555 B CYS 77 SG ? ? B CYS 150 B CYS 173 1_555 ? ? ? ? ? ? ? 2.036 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 33 A . ? SER 29 A PRO 34 A ? PRO 30 A 1 1.06 2 SER 33 B . ? SER 129 B PRO 34 B ? PRO 130 B 1 0.96 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 26 ? GLN A 27 ? CYS A 22 GLN A 23 A 2 TRP A 64 ? THR A 67 ? TRP A 60 THR A 63 A 3 TRP A 74 ? TYR A 76 ? TRP A 70 TYR A 72 B 1 TRP B 64 ? PHE B 66 ? TRP B 160 PHE B 162 B 2 TRP B 74 ? TYR B 76 ? TRP B 170 TYR B 172 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 27 ? N GLN A 23 O PHE A 66 ? O PHE A 62 A 2 3 N CYS A 65 ? N CYS A 61 O GLU A 75 ? O GLU A 71 B 1 2 O CYS B 65 ? O CYS B 161 N GLU B 75 ? N GLU B 171 # _database_PDB_matrix.entry_id 1I5K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1I5K _atom_sites.fract_transf_matrix[1][1] 0.010872 _atom_sites.fract_transf_matrix[1][2] 0.006277 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012554 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006589 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 -3 ? ? ? A . n A 1 2 SER 2 -2 ? ? ? A . n A 1 3 GLU 3 -1 ? ? ? A . n A 1 4 GLU 4 0 0 GLU GLU A . n A 1 5 CYS 5 1 1 CYS CYS A . n A 1 6 MET 6 2 2 MET MET A . n A 1 7 HIS 7 3 3 HIS HIS A . n A 1 8 GLY 8 4 4 GLY GLY A . n A 1 9 SER 9 5 5 SER SER A . n A 1 10 GLY 10 6 6 GLY GLY A . n A 1 11 GLU 11 7 7 GLU GLU A . n A 1 12 ASN 12 8 8 ASN ASN A . n A 1 13 TYR 13 9 9 TYR TYR A . n A 1 14 ASP 14 10 10 ASP ASP A . n A 1 15 GLY 15 11 11 GLY GLY A . n A 1 16 LYS 16 12 12 LYS LYS A . n A 1 17 ILE 17 13 13 ILE ILE A . n A 1 18 SER 18 14 14 SER SER A . n A 1 19 LYS 19 15 15 LYS LYS A . n A 1 20 THR 20 16 16 THR THR A . n A 1 21 MET 21 17 17 MET MET A . n A 1 22 SER 22 18 18 SER SER A . n A 1 23 GLY 23 19 19 GLY GLY A . n A 1 24 LEU 24 20 20 LEU LEU A . n A 1 25 GLU 25 21 21 GLU GLU A . n A 1 26 CYS 26 22 22 CYS CYS A . n A 1 27 GLN 27 23 23 GLN GLN A . n A 1 28 ALA 28 24 24 ALA ALA A . n A 1 29 TRP 29 25 25 TRP TRP A . n A 1 30 ASP 30 26 26 ASP ASP A . n A 1 31 SER 31 27 27 SER SER A . n A 1 32 GLN 32 28 28 GLN GLN A . n A 1 33 SER 33 29 29 SER SER A . n A 1 34 PRO 34 30 30 PRO PRO A . n A 1 35 HIS 35 31 31 HIS HIS A . n A 1 36 ALA 36 32 32 ALA ALA A . n A 1 37 HIS 37 33 33 HIS HIS A . n A 1 38 GLY 38 34 34 GLY GLY A . n A 1 39 TYR 39 35 35 TYR TYR A . n A 1 40 ILE 40 36 36 ILE ILE A . n A 1 41 PRO 41 37 37 PRO PRO A . n A 1 42 SER 42 38 38 SER SER A . n A 1 43 LYS 43 39 39 LYS LYS A . n A 1 44 PHE 44 40 40 PHE PHE A . n A 1 45 PRO 45 41 41 PRO PRO A . n A 1 46 ASN 46 42 42 ASN ASN A . n A 1 47 LYS 47 43 43 LYS LYS A . n A 1 48 ASN 48 44 44 ASN ASN A . n A 1 49 LEU 49 45 45 LEU LEU A . n A 1 50 LYS 50 46 46 LYS LYS A . n A 1 51 LYS 51 47 47 LYS LYS A . n A 1 52 ASN 52 48 48 ASN ASN A . n A 1 53 TYR 53 49 49 TYR TYR A . n A 1 54 CYS 54 50 50 CYS CYS A . n A 1 55 ARG 55 51 51 ARG ARG A . n A 1 56 ASN 56 52 52 ASN ASN A . n A 1 57 PRO 57 53 53 PRO PRO A . n A 1 58 ASP 58 54 54 ASP ASP A . n A 1 59 ARG 59 55 55 ARG ARG A . n A 1 60 ASP 60 56 56 ASP ASP A . n A 1 61 LEU 61 57 57 LEU LEU A . n A 1 62 ARG 62 58 58 ARG ARG A . n A 1 63 PRO 63 59 59 PRO PRO A . n A 1 64 TRP 64 60 60 TRP TRP A . n A 1 65 CYS 65 61 61 CYS CYS A . n A 1 66 PHE 66 62 62 PHE PHE A . n A 1 67 THR 67 63 63 THR THR A . n A 1 68 THR 68 64 64 THR THR A . n A 1 69 ASP 69 65 65 ASP ASP A . n A 1 70 PRO 70 66 66 PRO PRO A . n A 1 71 ASN 71 67 67 ASN ASN A . n A 1 72 LYS 72 68 68 LYS LYS A . n A 1 73 ARG 73 69 69 ARG ARG A . n A 1 74 TRP 74 70 70 TRP TRP A . n A 1 75 GLU 75 71 71 GLU GLU A . n A 1 76 TYR 76 72 72 TYR TYR A . n A 1 77 CYS 77 73 73 CYS CYS A . n A 1 78 ASP 78 74 74 ASP ASP A . n A 1 79 ILE 79 75 75 ILE ILE A . n A 1 80 PRO 80 76 76 PRO PRO A . n A 1 81 ARG 81 77 77 ARG ARG A . n A 1 82 CYS 82 78 78 CYS CYS A . n A 1 83 ALA 83 79 ? ? ? A . n A 1 84 ALA 84 80 ? ? ? A . n B 1 1 PHE 1 97 ? ? ? B . n B 1 2 SER 2 98 ? ? ? B . n B 1 3 GLU 3 99 99 GLU ALA B . n B 1 4 GLU 4 100 100 GLU GLU B . n B 1 5 CYS 5 101 101 CYS CYS B . n B 1 6 MET 6 102 102 MET MET B . n B 1 7 HIS 7 103 103 HIS HIS B . n B 1 8 GLY 8 104 104 GLY GLY B . n B 1 9 SER 9 105 105 SER SER B . n B 1 10 GLY 10 106 106 GLY GLY B . n B 1 11 GLU 11 107 107 GLU GLU B . n B 1 12 ASN 12 108 108 ASN ASN B . n B 1 13 TYR 13 109 109 TYR TYR B . n B 1 14 ASP 14 110 110 ASP ASP B . n B 1 15 GLY 15 111 111 GLY GLY B . n B 1 16 LYS 16 112 112 LYS LYS B . n B 1 17 ILE 17 113 113 ILE ILE B . n B 1 18 SER 18 114 114 SER SER B . n B 1 19 LYS 19 115 115 LYS LYS B . n B 1 20 THR 20 116 116 THR THR B . n B 1 21 MET 21 117 117 MET MET B . n B 1 22 SER 22 118 118 SER SER B . n B 1 23 GLY 23 119 119 GLY GLY B . n B 1 24 LEU 24 120 120 LEU LEU B . n B 1 25 GLU 25 121 121 GLU GLU B . n B 1 26 CYS 26 122 122 CYS CYS B . n B 1 27 GLN 27 123 123 GLN GLN B . n B 1 28 ALA 28 124 124 ALA ALA B . n B 1 29 TRP 29 125 125 TRP TRP B . n B 1 30 ASP 30 126 126 ASP ASP B . n B 1 31 SER 31 127 127 SER SER B . n B 1 32 GLN 32 128 128 GLN GLN B . n B 1 33 SER 33 129 129 SER SER B . n B 1 34 PRO 34 130 130 PRO PRO B . n B 1 35 HIS 35 131 131 HIS HIS B . n B 1 36 ALA 36 132 132 ALA ALA B . n B 1 37 HIS 37 133 133 HIS HIS B . n B 1 38 GLY 38 134 134 GLY GLY B . n B 1 39 TYR 39 135 135 TYR TYR B . n B 1 40 ILE 40 136 136 ILE ILE B . n B 1 41 PRO 41 137 137 PRO PRO B . n B 1 42 SER 42 138 138 SER SER B . n B 1 43 LYS 43 139 139 LYS LYS B . n B 1 44 PHE 44 140 140 PHE PHE B . n B 1 45 PRO 45 141 141 PRO PRO B . n B 1 46 ASN 46 142 142 ASN ASN B . n B 1 47 LYS 47 143 143 LYS LYS B . n B 1 48 ASN 48 144 144 ASN ASN B . n B 1 49 LEU 49 145 145 LEU LEU B . n B 1 50 LYS 50 146 146 LYS LYS B . n B 1 51 LYS 51 147 147 LYS LYS B . n B 1 52 ASN 52 148 148 ASN ASN B . n B 1 53 TYR 53 149 149 TYR TYR B . n B 1 54 CYS 54 150 150 CYS CYS B . n B 1 55 ARG 55 151 151 ARG ARG B . n B 1 56 ASN 56 152 152 ASN ASN B . n B 1 57 PRO 57 153 153 PRO PRO B . n B 1 58 ASP 58 154 154 ASP ASP B . n B 1 59 ARG 59 155 155 ARG ARG B . n B 1 60 ASP 60 156 156 ASP ASP B . n B 1 61 LEU 61 157 157 LEU LEU B . n B 1 62 ARG 62 158 158 ARG ARG B . n B 1 63 PRO 63 159 159 PRO PRO B . n B 1 64 TRP 64 160 160 TRP TRP B . n B 1 65 CYS 65 161 161 CYS CYS B . n B 1 66 PHE 66 162 162 PHE PHE B . n B 1 67 THR 67 163 163 THR THR B . n B 1 68 THR 68 164 164 THR THR B . n B 1 69 ASP 69 165 165 ASP ASP B . n B 1 70 PRO 70 166 166 PRO PRO B . n B 1 71 ASN 71 167 167 ASN ASN B . n B 1 72 LYS 72 168 168 LYS LYS B . n B 1 73 ARG 73 169 169 ARG ARG B . n B 1 74 TRP 74 170 170 TRP TRP B . n B 1 75 GLU 75 171 171 GLU GLU B . n B 1 76 TYR 76 172 172 TYR TYR B . n B 1 77 CYS 77 173 173 CYS CYS B . n B 1 78 ASP 78 174 174 ASP ASP B . n B 1 79 ILE 79 175 175 ILE ILE B . n B 1 80 PRO 80 176 176 PRO PRO B . n B 1 81 ARG 81 177 177 ARG ARG B . n B 1 82 CYS 82 178 178 CYS CYS B . n B 1 83 ALA 83 179 ? ? ? B . n B 1 84 ALA 84 180 ? ? ? B . n C 2 1 VAL 1 301 ? ? ? C . n C 2 2 GLU 2 302 302 GLU GLU C . n C 2 3 LYS 3 303 303 LYS LYS C . n C 2 4 LEU 4 304 304 LEU LEU C . n C 2 5 THR 5 305 305 THR THR C . n C 2 6 ALA 6 306 306 ALA ALA C . n C 2 7 ASP 7 307 307 ASP ASP C . n C 2 8 ALA 8 308 308 ALA ALA C . n C 2 9 GLU 9 309 309 GLU GLU C . n C 2 10 LEU 10 310 310 LEU LEU C . n C 2 11 GLN 11 311 311 GLN GLN C . n C 2 12 ARG 12 312 312 ARG ARG C . n C 2 13 LEU 13 313 313 LEU LEU C . n C 2 14 LYS 14 314 314 LYS LYS C . n C 2 15 ASN 15 315 315 ASN ASN C . n C 2 16 GLU 16 316 316 GLU GLU C . n C 2 17 ARG 17 317 317 ARG ARG C . n C 2 18 HIS 18 318 318 HIS HIS C . n C 2 19 GLU 19 319 319 GLU GLU C . n C 2 20 GLU 20 320 320 GLU GLU C . n C 2 21 ALA 21 321 321 ALA ALA C . n C 2 22 GLU 22 322 322 GLU GLU C . n C 2 23 LEU 23 323 323 LEU LEU C . n C 2 24 GLU 24 324 324 GLU GLU C . n C 2 25 ARG 25 325 325 ARG ARG C . n C 2 26 LEU 26 326 326 LEU LEU C . n C 2 27 LYS 27 327 327 LYS LYS C . n C 2 28 SER 28 328 ? ? ? C . n C 2 29 GLU 29 329 ? ? ? C . n C 2 30 TYR 30 330 ? ? ? C . n D 2 1 VAL 1 401 ? ? ? D . n D 2 2 GLU 2 402 402 GLU GLU D . n D 2 3 LYS 3 403 403 LYS LYS D . n D 2 4 LEU 4 404 404 LEU LEU D . n D 2 5 THR 5 405 405 THR THR D . n D 2 6 ALA 6 406 406 ALA ALA D . n D 2 7 ASP 7 407 407 ASP ASP D . n D 2 8 ALA 8 408 408 ALA ALA D . n D 2 9 GLU 9 409 409 GLU GLU D . n D 2 10 LEU 10 410 410 LEU LEU D . n D 2 11 GLN 11 411 411 GLN GLN D . n D 2 12 ARG 12 412 412 ARG ARG D . n D 2 13 LEU 13 413 413 LEU LEU D . n D 2 14 LYS 14 414 414 LYS LYS D . n D 2 15 ASN 15 415 415 ASN ASN D . n D 2 16 GLU 16 416 416 GLU GLU D . n D 2 17 ARG 17 417 417 ARG ARG D . n D 2 18 HIS 18 418 418 HIS HIS D . n D 2 19 GLU 19 419 419 GLU GLU D . n D 2 20 GLU 20 420 420 GLU GLU D . n D 2 21 ALA 21 421 421 ALA ALA D . n D 2 22 GLU 22 422 422 GLU GLU D . n D 2 23 LEU 23 423 423 LEU LEU D . n D 2 24 GLU 24 424 424 GLU GLU D . n D 2 25 ARG 25 425 425 ARG ARG D . n D 2 26 LEU 26 426 426 LEU LEU D . n D 2 27 LYS 27 427 427 LYS LYS D . n D 2 28 SER 28 428 ? ? ? D . n D 2 29 GLU 29 429 ? ? ? D . n D 2 30 TYR 30 430 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 500 500 HOH WAT A . E 3 HOH 2 501 501 HOH WAT A . E 3 HOH 3 506 506 HOH WAT A . E 3 HOH 4 509 509 HOH WAT A . E 3 HOH 5 512 512 HOH WAT A . E 3 HOH 6 513 513 HOH WAT A . E 3 HOH 7 515 515 HOH WAT A . E 3 HOH 8 516 516 HOH WAT A . E 3 HOH 9 518 518 HOH WAT A . E 3 HOH 10 521 521 HOH WAT A . E 3 HOH 11 528 528 HOH WAT A . E 3 HOH 12 529 529 HOH WAT A . E 3 HOH 13 534 534 HOH WAT A . E 3 HOH 14 535 535 HOH WAT A . E 3 HOH 15 542 542 HOH WAT A . E 3 HOH 16 544 544 HOH WAT A . E 3 HOH 17 547 547 HOH WAT A . E 3 HOH 18 549 549 HOH WAT A . E 3 HOH 19 550 550 HOH WAT A . E 3 HOH 20 558 558 HOH WAT A . E 3 HOH 21 561 561 HOH WAT A . E 3 HOH 22 563 563 HOH WAT A . E 3 HOH 23 568 568 HOH WAT A . E 3 HOH 24 570 570 HOH WAT A . E 3 HOH 25 572 572 HOH WAT A . E 3 HOH 26 575 575 HOH WAT A . E 3 HOH 27 577 577 HOH WAT A . E 3 HOH 28 580 580 HOH WAT A . E 3 HOH 29 581 581 HOH WAT A . E 3 HOH 30 582 582 HOH WAT A . E 3 HOH 31 584 584 HOH WAT A . E 3 HOH 32 586 586 HOH WAT A . E 3 HOH 33 588 588 HOH WAT A . E 3 HOH 34 591 591 HOH WAT A . E 3 HOH 35 592 592 HOH WAT A . E 3 HOH 36 595 595 HOH WAT A . E 3 HOH 37 596 596 HOH WAT A . E 3 HOH 38 599 599 HOH WAT A . E 3 HOH 39 600 600 HOH WAT A . E 3 HOH 40 603 603 HOH WAT A . E 3 HOH 41 604 604 HOH WAT A . E 3 HOH 42 605 605 HOH WAT A . E 3 HOH 43 606 606 HOH WAT A . E 3 HOH 44 609 609 HOH WAT A . E 3 HOH 45 610 610 HOH WAT A . E 3 HOH 46 616 616 HOH WAT A . E 3 HOH 47 626 626 HOH WAT A . E 3 HOH 48 627 627 HOH WAT A . E 3 HOH 49 631 631 HOH WAT A . E 3 HOH 50 632 632 HOH WAT A . F 3 HOH 1 502 502 HOH WAT B . F 3 HOH 2 503 503 HOH WAT B . F 3 HOH 3 504 504 HOH WAT B . F 3 HOH 4 508 508 HOH WAT B . F 3 HOH 5 520 520 HOH WAT B . F 3 HOH 6 524 524 HOH WAT B . F 3 HOH 7 527 527 HOH WAT B . F 3 HOH 8 530 530 HOH WAT B . F 3 HOH 9 531 531 HOH WAT B . F 3 HOH 10 533 533 HOH WAT B . F 3 HOH 11 536 536 HOH WAT B . F 3 HOH 12 537 537 HOH WAT B . F 3 HOH 13 539 539 HOH WAT B . F 3 HOH 14 540 540 HOH WAT B . F 3 HOH 15 541 541 HOH WAT B . F 3 HOH 16 545 545 HOH WAT B . F 3 HOH 17 551 551 HOH WAT B . F 3 HOH 18 553 553 HOH WAT B . F 3 HOH 19 555 555 HOH WAT B . F 3 HOH 20 560 560 HOH WAT B . F 3 HOH 21 562 562 HOH WAT B . F 3 HOH 22 566 566 HOH WAT B . F 3 HOH 23 567 567 HOH WAT B . F 3 HOH 24 573 573 HOH WAT B . F 3 HOH 25 579 579 HOH WAT B . F 3 HOH 26 583 583 HOH WAT B . F 3 HOH 27 587 587 HOH WAT B . F 3 HOH 28 589 589 HOH WAT B . F 3 HOH 29 597 597 HOH WAT B . F 3 HOH 30 598 598 HOH WAT B . F 3 HOH 31 601 601 HOH WAT B . F 3 HOH 32 608 608 HOH WAT B . F 3 HOH 33 612 612 HOH WAT B . F 3 HOH 34 614 614 HOH WAT B . F 3 HOH 35 615 615 HOH WAT B . F 3 HOH 36 618 618 HOH WAT B . F 3 HOH 37 619 619 HOH WAT B . F 3 HOH 38 628 628 HOH WAT B . F 3 HOH 39 629 629 HOH WAT B . G 3 HOH 1 514 514 HOH WAT C . G 3 HOH 2 522 522 HOH WAT C . G 3 HOH 3 523 523 HOH WAT C . G 3 HOH 4 543 543 HOH WAT C . G 3 HOH 5 546 546 HOH WAT C . G 3 HOH 6 548 548 HOH WAT C . G 3 HOH 7 554 554 HOH WAT C . G 3 HOH 8 564 564 HOH WAT C . G 3 HOH 9 569 569 HOH WAT C . G 3 HOH 10 571 571 HOH WAT C . G 3 HOH 11 574 574 HOH WAT C . G 3 HOH 12 593 593 HOH WAT C . G 3 HOH 13 602 602 HOH WAT C . G 3 HOH 14 607 607 HOH WAT C . G 3 HOH 15 613 613 HOH WAT C . G 3 HOH 16 617 617 HOH WAT C . G 3 HOH 17 622 622 HOH WAT C . G 3 HOH 18 625 625 HOH WAT C . H 3 HOH 1 505 505 HOH WAT D . H 3 HOH 2 507 507 HOH WAT D . H 3 HOH 3 510 510 HOH WAT D . H 3 HOH 4 511 511 HOH WAT D . H 3 HOH 5 517 517 HOH WAT D . H 3 HOH 6 519 519 HOH WAT D . H 3 HOH 7 525 525 HOH WAT D . H 3 HOH 8 526 526 HOH WAT D . H 3 HOH 9 532 532 HOH WAT D . H 3 HOH 10 538 538 HOH WAT D . H 3 HOH 11 552 552 HOH WAT D . H 3 HOH 12 556 556 HOH WAT D . H 3 HOH 13 557 557 HOH WAT D . H 3 HOH 14 559 559 HOH WAT D . H 3 HOH 15 565 565 HOH WAT D . H 3 HOH 16 576 576 HOH WAT D . H 3 HOH 17 578 578 HOH WAT D . H 3 HOH 18 585 585 HOH WAT D . H 3 HOH 19 590 590 HOH WAT D . H 3 HOH 20 594 594 HOH WAT D . H 3 HOH 21 611 611 HOH WAT D . H 3 HOH 22 620 620 HOH WAT D . H 3 HOH 23 621 621 HOH WAT D . H 3 HOH 24 623 623 HOH WAT D . H 3 HOH 25 624 624 HOH WAT D . H 3 HOH 26 630 630 HOH WAT D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 609 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id E _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-08-01 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 1 4 2021-10-27 6 'Structure model' 1 5 2023-08-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 5 'Structure model' 'Database references' 5 6 'Structure model' 'Data collection' 6 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' database_2 2 5 'Structure model' struct_ref_seq_dif 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.0 ? 4 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 C _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 554 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 C _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 554 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 12_555 _pdbx_validate_symm_contact.dist 1.81 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CG _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 GLU _pdbx_validate_rmsd_bond.auth_seq_id_1 424 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 GLU _pdbx_validate_rmsd_bond.auth_seq_id_2 424 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.606 _pdbx_validate_rmsd_bond.bond_target_value 1.515 _pdbx_validate_rmsd_bond.bond_deviation 0.091 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.015 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 155 ? ? CZ B ARG 155 ? ? NH1 B ARG 155 ? ? 117.10 120.30 -3.20 0.50 N 2 1 CA B CYS 161 ? ? CB B CYS 161 ? ? SG B CYS 161 ? ? 121.14 114.20 6.94 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS A 3 ? ? -65.08 -80.18 2 1 MET A 17 ? ? -58.46 -1.67 3 1 TYR A 35 ? ? -99.66 48.76 4 1 LYS A 47 ? ? 24.74 -119.86 5 1 LYS B 147 ? ? 40.89 -108.20 6 1 ASN B 148 ? ? -142.17 31.49 7 1 LEU C 304 ? ? -101.75 52.01 8 1 GLU D 424 ? ? -38.59 -79.31 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id HIS _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 3 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.104 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 99 ? CG ? B GLU 3 CG 2 1 Y 1 B GLU 99 ? CD ? B GLU 3 CD 3 1 Y 1 B GLU 99 ? OE1 ? B GLU 3 OE1 4 1 Y 1 B GLU 99 ? OE2 ? B GLU 3 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PHE -3 ? A PHE 1 2 1 Y 1 A SER -2 ? A SER 2 3 1 Y 1 A GLU -1 ? A GLU 3 4 1 Y 1 A ALA 79 ? A ALA 83 5 1 Y 1 A ALA 80 ? A ALA 84 6 1 Y 1 B PHE 97 ? B PHE 1 7 1 Y 1 B SER 98 ? B SER 2 8 1 Y 1 B ALA 179 ? B ALA 83 9 1 Y 1 B ALA 180 ? B ALA 84 10 1 Y 1 C VAL 301 ? C VAL 1 11 1 Y 1 C SER 328 ? C SER 28 12 1 Y 1 C GLU 329 ? C GLU 29 13 1 Y 1 C TYR 330 ? C TYR 30 14 1 Y 1 D VAL 401 ? D VAL 1 15 1 Y 1 D SER 428 ? D SER 28 16 1 Y 1 D GLU 429 ? D GLU 29 17 1 Y 1 D TYR 430 ? D TYR 30 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PK4 _pdbx_initial_refinement_model.details 'Using K4 Pg (PDB entry 1PK4)' #