data_1IG5 # _entry.id 1IG5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1IG5 pdb_00001ig5 10.2210/pdb1ig5/pdb RCSB RCSB013243 ? ? WWPDB D_1000013243 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-04-25 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.value' 16 5 'Structure model' '_struct_conn.pdbx_dist_value' 17 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 30 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 31 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2001-04-25 _pdbx_database_PDB_obs_spr.pdb_id 1IG5 _pdbx_database_PDB_obs_spr.replace_pdb_id 5ICB _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IG5 _pdbx_database_status.recvd_initial_deposition_date 2001-04-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3icb 'refined structure of vitamin D-dependent calcium-binding protein from bovine intestine' unspecified PDB 4icb 'Proline cis-trans isomers in calbindin D9k observed by X-ray crystallography' unspecified PDB 1IGV 'Bovine Calbindin D9K Binding Mn2+' unspecified PDB 1clb 'Determination of the solution structure of Apo calbindin D9k by NMR spectroscopy' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Andersson, E.M.' 1 'Svensson, L.A.' 2 # _citation.id primary _citation.title 'Structural basis for the negative allostery between Ca(2+)- and Mg(2+)-binding in the intracellular Ca(2+)-receptor calbindin D9k.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 6 _citation.page_first 1139 _citation.page_last 1147 _citation.year 1997 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9194174 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Andersson, M.' 1 ? primary 'Malmendal, A.' 2 ? primary 'Linse, S.' 3 ? primary 'Ivarsson, I.' 4 ? primary 'Forsen, S.' 5 ? primary 'Svensson, L.A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'VITAMIN D-DEPENDENT CALCIUM-BINDING PROTEIN, INTESTINAL' 8510.556 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 50 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CALBINDIN D9K' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code KSPEELKGIFEKYAAKEGDPNQLSKEELKLLLQTEFPSLLKGPSTLDELFEELDKNGDGEVSFEEFQVLVKKISQ _entity_poly.pdbx_seq_one_letter_code_can KSPEELKGIFEKYAAKEGDPNQLSKEELKLLLQTEFPSLLKGPSTLDELFEELDKNGDGEVSFEEFQVLVKKISQ _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 SER n 1 3 PRO n 1 4 GLU n 1 5 GLU n 1 6 LEU n 1 7 LYS n 1 8 GLY n 1 9 ILE n 1 10 PHE n 1 11 GLU n 1 12 LYS n 1 13 TYR n 1 14 ALA n 1 15 ALA n 1 16 LYS n 1 17 GLU n 1 18 GLY n 1 19 ASP n 1 20 PRO n 1 21 ASN n 1 22 GLN n 1 23 LEU n 1 24 SER n 1 25 LYS n 1 26 GLU n 1 27 GLU n 1 28 LEU n 1 29 LYS n 1 30 LEU n 1 31 LEU n 1 32 LEU n 1 33 GLN n 1 34 THR n 1 35 GLU n 1 36 PHE n 1 37 PRO n 1 38 SER n 1 39 LEU n 1 40 LEU n 1 41 LYS n 1 42 GLY n 1 43 PRO n 1 44 SER n 1 45 THR n 1 46 LEU n 1 47 ASP n 1 48 GLU n 1 49 LEU n 1 50 PHE n 1 51 GLU n 1 52 GLU n 1 53 LEU n 1 54 ASP n 1 55 LYS n 1 56 ASN n 1 57 GLY n 1 58 ASP n 1 59 GLY n 1 60 GLU n 1 61 VAL n 1 62 SER n 1 63 PHE n 1 64 GLU n 1 65 GLU n 1 66 PHE n 1 67 GLN n 1 68 VAL n 1 69 LEU n 1 70 VAL n 1 71 LYS n 1 72 LYS n 1 73 ILE n 1 74 SER n 1 75 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name cattle _entity_src_gen.gene_src_genus Bos _entity_src_gen.pdbx_gene_src_gene 'synthetic gene' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain MM294 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name picb1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 ASN 21 21 21 ASN ASN A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 GLN 33 33 33 GLN GLN A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 GLU 51 51 51 GLU ALA A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 VAL 61 61 61 VAL VAL A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 GLN 67 67 67 GLN GLN A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 GLN 75 75 75 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 78 78 MG MG A . C 3 HOH 1 100 100 HOH HOH A . C 3 HOH 2 101 101 HOH HOH A . C 3 HOH 3 102 102 HOH HOH A . C 3 HOH 4 103 103 HOH HOH A . C 3 HOH 5 104 104 HOH HOH A . C 3 HOH 6 105 105 HOH HOH A . C 3 HOH 7 106 106 HOH HOH A . C 3 HOH 8 107 107 HOH HOH A . C 3 HOH 9 108 108 HOH HOH A . C 3 HOH 10 109 109 HOH HOH A . C 3 HOH 11 110 110 HOH HOH A . C 3 HOH 12 111 111 HOH HOH A . C 3 HOH 13 112 112 HOH HOH A . C 3 HOH 14 113 113 HOH HOH A . C 3 HOH 15 114 114 HOH HOH A . C 3 HOH 16 115 115 HOH HOH A . C 3 HOH 17 116 116 HOH HOH A . C 3 HOH 18 117 117 HOH HOH A . C 3 HOH 19 118 118 HOH HOH A . C 3 HOH 20 119 119 HOH HOH A . C 3 HOH 21 120 120 HOH HOH A . C 3 HOH 22 121 121 HOH HOH A . C 3 HOH 23 122 122 HOH HOH A . C 3 HOH 24 123 123 HOH HOH A . C 3 HOH 25 124 124 HOH HOH A . C 3 HOH 26 125 125 HOH HOH A . C 3 HOH 27 126 126 HOH HOH A . C 3 HOH 28 127 127 HOH HOH A . C 3 HOH 29 128 128 HOH HOH A . C 3 HOH 30 129 129 HOH HOH A . C 3 HOH 31 130 130 HOH HOH A . C 3 HOH 32 131 131 HOH HOH A . C 3 HOH 33 132 132 HOH HOH A . C 3 HOH 34 133 133 HOH HOH A . C 3 HOH 35 134 134 HOH HOH A . C 3 HOH 36 135 135 HOH HOH A . C 3 HOH 37 136 136 HOH HOH A . C 3 HOH 38 137 137 HOH HOH A . C 3 HOH 39 138 138 HOH HOH A . C 3 HOH 40 139 139 HOH HOH A . C 3 HOH 41 140 140 HOH HOH A . C 3 HOH 42 141 141 HOH HOH A . C 3 HOH 43 142 142 HOH HOH A . C 3 HOH 44 143 143 HOH HOH A . C 3 HOH 45 144 144 HOH HOH A . C 3 HOH 46 145 145 HOH HOH A . C 3 HOH 47 146 146 HOH HOH A . C 3 HOH 48 147 147 HOH HOH A . C 3 HOH 49 148 148 HOH HOH A . C 3 HOH 50 149 149 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 51 ? CG ? A GLU 51 CG 2 1 Y 1 A GLU 51 ? CD ? A GLU 51 CD 3 1 Y 1 A GLU 51 ? OE1 ? A GLU 51 OE1 4 1 Y 1 A GLU 51 ? OE2 ? A GLU 51 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MLPHARE phasing . ? 1 X-PLOR refinement 3.851 ? 2 XDS 'data reduction' . ? 3 XSCALE 'data scaling' . ? 4 # _cell.entry_id 1IG5 _cell.length_a 33.730 _cell.length_b 33.730 _cell.length_c 129.470 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IG5 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 1IG5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 43. _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.4 _exptl_crystal_grow.pdbx_details '3M ammonium sulphate, 100 mM magnesium chloride, pH 6.4, EVAPORATION, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 295 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS _diffrn_detector.pdbx_collection_date 1994-11-10 _diffrn_detector.details COLLIMATOR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1IG5 _reflns.observed_criterion_sigma_I 0. _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 22.3 _reflns.d_resolution_high 1.50 _reflns.number_obs 11090 _reflns.number_all ? _reflns.percent_possible_obs 81. _reflns.pdbx_Rmerge_I_obs 0.0750000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14. _reflns.B_iso_Wilson_estimate 22.8 _reflns.pdbx_redundancy 4.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.5 _reflns_shell.d_res_low 1.7 _reflns_shell.percent_possible_all 58. _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.2100000 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 2.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1IG5 _refine.ls_number_reflns_obs 8452 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 950202 _refine.pdbx_data_cutoff_low_absF 0.0 _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 66.3 _refine.ls_R_factor_obs 0.1960000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1960000 _refine.ls_R_factor_R_free 0.2850000 _refine.ls_R_factor_R_free_error 0.010 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.4 _refine.ls_number_reflns_R_free 882 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 25.5 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MULTIPLE ISOMORPHOUS REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1IG5 _refine_analyze.Luzzati_coordinate_error_obs 0.22 _refine_analyze.Luzzati_sigma_a_obs 0.19 _refine_analyze.Luzzati_d_res_low_obs 5.0 _refine_analyze.Luzzati_coordinate_error_free 0.29 _refine_analyze.Luzzati_sigma_a_free 0.16 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 596 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 50 _refine_hist.number_atoms_total 647 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.020 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.9 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 21.6 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.75 ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.84 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.92 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 3.35 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 5.27 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.59 _refine_ls_shell.number_reflns_R_work 446 _refine_ls_shell.R_factor_R_work 0.2820000 _refine_ls_shell.percent_reflns_obs 24.0 _refine_ls_shell.R_factor_R_free 0.3370000 _refine_ls_shell.R_factor_R_free_error 0.047 _refine_ls_shell.percent_reflns_R_free 10.4 _refine_ls_shell.number_reflns_R_free 52 _refine_ls_shell.number_reflns_obs 498 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL TOPH19_MOD.SOL 'X-RAY DIFFRACTION' 3 PARAM_MG.ION TOPH19.ION 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1IG5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1IG5 _struct.title 'BOVINE CALBINDIN D9K BINDING MG2+' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IG5 _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.text 'CALCIUM-BINDING PROTEIN, EF-HAND, MAGNESIUM BINDING, METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code S100G_BOVIN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P02633 _struct_ref.pdbx_seq_one_letter_code KSPEELKGIFEKYAAKEGDPNQLSKEELKLLLQTEFPSLLKGPSTLDELFEELDKNGDGEVSFEEFQVLVKKISQ _struct_ref.pdbx_align_begin 4 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1IG5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 75 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02633 _struct_ref_seq.db_align_beg 4 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 78 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 75 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 2 ? ALA A 15 ? SER A 2 ALA A 15 1 ? 14 HELX_P HELX_P2 2 LYS A 25 ? PHE A 36 ? LYS A 25 PHE A 36 1 ? 12 HELX_P HELX_P3 3 PRO A 37 ? LYS A 41 ? PRO A 37 LYS A 41 5 ? 5 HELX_P HELX_P4 4 THR A 45 ? ASP A 54 ? THR A 45 ASP A 54 1 ? 10 HELX_P HELX_P5 5 SER A 62 ? SER A 74 ? SER A 62 SER A 74 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 54 OD1 ? ? ? 1_555 B MG . MG ? ? A ASP 54 A MG 78 1_555 ? ? ? ? ? ? ? 2.062 ? ? metalc2 metalc ? ? A ASN 56 OD1 ? ? ? 1_555 B MG . MG ? ? A ASN 56 A MG 78 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc3 metalc ? ? A ASP 58 OD1 ? ? ? 1_555 B MG . MG ? ? A ASP 58 A MG 78 1_555 ? ? ? ? ? ? ? 2.105 ? ? metalc4 metalc ? ? A GLU 60 O ? ? ? 1_555 B MG . MG ? ? A GLU 60 A MG 78 1_555 ? ? ? ? ? ? ? 1.990 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 78 A HOH 110 1_555 ? ? ? ? ? ? ? 1.964 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 78 A HOH 112 1_555 ? ? ? ? ? ? ? 2.096 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 OD1 ? A ASN 56 ? A ASN 56 ? 1_555 84.4 ? 2 OD1 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 83.5 ? 3 OD1 ? A ASN 56 ? A ASN 56 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 81.5 ? 4 OD1 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? A GLU 60 ? A GLU 60 ? 1_555 91.3 ? 5 OD1 ? A ASN 56 ? A ASN 56 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? A GLU 60 ? A GLU 60 ? 1_555 171.0 ? 6 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? A GLU 60 ? A GLU 60 ? 1_555 90.2 ? 7 OD1 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? C HOH . ? A HOH 110 ? 1_555 98.8 ? 8 OD1 ? A ASN 56 ? A ASN 56 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? C HOH . ? A HOH 110 ? 1_555 93.9 ? 9 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? C HOH . ? A HOH 110 ? 1_555 174.6 ? 10 O ? A GLU 60 ? A GLU 60 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? C HOH . ? A HOH 110 ? 1_555 94.6 ? 11 OD1 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? C HOH . ? A HOH 112 ? 1_555 169.0 ? 12 OD1 ? A ASN 56 ? A ASN 56 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? C HOH . ? A HOH 112 ? 1_555 91.4 ? 13 OD1 ? A ASP 58 ? A ASP 58 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? C HOH . ? A HOH 112 ? 1_555 85.8 ? 14 O ? A GLU 60 ? A GLU 60 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? C HOH . ? A HOH 112 ? 1_555 91.5 ? 15 O ? C HOH . ? A HOH 110 ? 1_555 MG ? B MG . ? A MG 78 ? 1_555 O ? C HOH . ? A HOH 112 ? 1_555 91.6 ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 23 ? SER A 24 ? LEU A 23 SER A 24 A 2 GLU A 60 ? VAL A 61 ? GLU A 60 VAL A 61 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id O _pdbx_struct_sheet_hbond.range_1_label_comp_id LEU _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 23 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id O _pdbx_struct_sheet_hbond.range_1_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 23 _pdbx_struct_sheet_hbond.range_2_label_atom_id N _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 61 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id N _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 61 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details MUM Author ? ? ? ? 4 'MG BINDING EF-HAND LOOP.' AC1 Software A MG 78 ? 7 'BINDING SITE FOR RESIDUE MG A 78' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 MUM 4 ASP A 54 ? ASP A 54 . ? 1_555 ? 2 MUM 4 ASN A 56 ? ASN A 56 . ? 1_555 ? 3 MUM 4 ASP A 58 ? ASP A 58 . ? 1_555 ? 4 MUM 4 GLU A 60 ? GLU A 60 . ? 1_555 ? 5 AC1 7 ASP A 54 ? ASP A 54 . ? 1_555 ? 6 AC1 7 ASN A 56 ? ASN A 56 . ? 1_555 ? 7 AC1 7 ASP A 58 ? ASP A 58 . ? 1_555 ? 8 AC1 7 GLU A 60 ? GLU A 60 . ? 1_555 ? 9 AC1 7 GLN A 75 ? GLN A 75 . ? 6_455 ? 10 AC1 7 HOH C . ? HOH A 110 . ? 1_555 ? 11 AC1 7 HOH C . ? HOH A 112 . ? 1_555 ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASN N N N N 14 ASN CA C N S 15 ASN C C N N 16 ASN O O N N 17 ASN CB C N N 18 ASN CG C N N 19 ASN OD1 O N N 20 ASN ND2 N N N 21 ASN OXT O N N 22 ASN H H N N 23 ASN H2 H N N 24 ASN HA H N N 25 ASN HB2 H N N 26 ASN HB3 H N N 27 ASN HD21 H N N 28 ASN HD22 H N N 29 ASN HXT H N N 30 ASP N N N N 31 ASP CA C N S 32 ASP C C N N 33 ASP O O N N 34 ASP CB C N N 35 ASP CG C N N 36 ASP OD1 O N N 37 ASP OD2 O N N 38 ASP OXT O N N 39 ASP H H N N 40 ASP H2 H N N 41 ASP HA H N N 42 ASP HB2 H N N 43 ASP HB3 H N N 44 ASP HD2 H N N 45 ASP HXT H N N 46 GLN N N N N 47 GLN CA C N S 48 GLN C C N N 49 GLN O O N N 50 GLN CB C N N 51 GLN CG C N N 52 GLN CD C N N 53 GLN OE1 O N N 54 GLN NE2 N N N 55 GLN OXT O N N 56 GLN H H N N 57 GLN H2 H N N 58 GLN HA H N N 59 GLN HB2 H N N 60 GLN HB3 H N N 61 GLN HG2 H N N 62 GLN HG3 H N N 63 GLN HE21 H N N 64 GLN HE22 H N N 65 GLN HXT H N N 66 GLU N N N N 67 GLU CA C N S 68 GLU C C N N 69 GLU O O N N 70 GLU CB C N N 71 GLU CG C N N 72 GLU CD C N N 73 GLU OE1 O N N 74 GLU OE2 O N N 75 GLU OXT O N N 76 GLU H H N N 77 GLU H2 H N N 78 GLU HA H N N 79 GLU HB2 H N N 80 GLU HB3 H N N 81 GLU HG2 H N N 82 GLU HG3 H N N 83 GLU HE2 H N N 84 GLU HXT H N N 85 GLY N N N N 86 GLY CA C N N 87 GLY C C N N 88 GLY O O N N 89 GLY OXT O N N 90 GLY H H N N 91 GLY H2 H N N 92 GLY HA2 H N N 93 GLY HA3 H N N 94 GLY HXT H N N 95 HOH O O N N 96 HOH H1 H N N 97 HOH H2 H N N 98 ILE N N N N 99 ILE CA C N S 100 ILE C C N N 101 ILE O O N N 102 ILE CB C N S 103 ILE CG1 C N N 104 ILE CG2 C N N 105 ILE CD1 C N N 106 ILE OXT O N N 107 ILE H H N N 108 ILE H2 H N N 109 ILE HA H N N 110 ILE HB H N N 111 ILE HG12 H N N 112 ILE HG13 H N N 113 ILE HG21 H N N 114 ILE HG22 H N N 115 ILE HG23 H N N 116 ILE HD11 H N N 117 ILE HD12 H N N 118 ILE HD13 H N N 119 ILE HXT H N N 120 LEU N N N N 121 LEU CA C N S 122 LEU C C N N 123 LEU O O N N 124 LEU CB C N N 125 LEU CG C N N 126 LEU CD1 C N N 127 LEU CD2 C N N 128 LEU OXT O N N 129 LEU H H N N 130 LEU H2 H N N 131 LEU HA H N N 132 LEU HB2 H N N 133 LEU HB3 H N N 134 LEU HG H N N 135 LEU HD11 H N N 136 LEU HD12 H N N 137 LEU HD13 H N N 138 LEU HD21 H N N 139 LEU HD22 H N N 140 LEU HD23 H N N 141 LEU HXT H N N 142 LYS N N N N 143 LYS CA C N S 144 LYS C C N N 145 LYS O O N N 146 LYS CB C N N 147 LYS CG C N N 148 LYS CD C N N 149 LYS CE C N N 150 LYS NZ N N N 151 LYS OXT O N N 152 LYS H H N N 153 LYS H2 H N N 154 LYS HA H N N 155 LYS HB2 H N N 156 LYS HB3 H N N 157 LYS HG2 H N N 158 LYS HG3 H N N 159 LYS HD2 H N N 160 LYS HD3 H N N 161 LYS HE2 H N N 162 LYS HE3 H N N 163 LYS HZ1 H N N 164 LYS HZ2 H N N 165 LYS HZ3 H N N 166 LYS HXT H N N 167 MG MG MG N N 168 PHE N N N N 169 PHE CA C N S 170 PHE C C N N 171 PHE O O N N 172 PHE CB C N N 173 PHE CG C Y N 174 PHE CD1 C Y N 175 PHE CD2 C Y N 176 PHE CE1 C Y N 177 PHE CE2 C Y N 178 PHE CZ C Y N 179 PHE OXT O N N 180 PHE H H N N 181 PHE H2 H N N 182 PHE HA H N N 183 PHE HB2 H N N 184 PHE HB3 H N N 185 PHE HD1 H N N 186 PHE HD2 H N N 187 PHE HE1 H N N 188 PHE HE2 H N N 189 PHE HZ H N N 190 PHE HXT H N N 191 PRO N N N N 192 PRO CA C N S 193 PRO C C N N 194 PRO O O N N 195 PRO CB C N N 196 PRO CG C N N 197 PRO CD C N N 198 PRO OXT O N N 199 PRO H H N N 200 PRO HA H N N 201 PRO HB2 H N N 202 PRO HB3 H N N 203 PRO HG2 H N N 204 PRO HG3 H N N 205 PRO HD2 H N N 206 PRO HD3 H N N 207 PRO HXT H N N 208 SER N N N N 209 SER CA C N S 210 SER C C N N 211 SER O O N N 212 SER CB C N N 213 SER OG O N N 214 SER OXT O N N 215 SER H H N N 216 SER H2 H N N 217 SER HA H N N 218 SER HB2 H N N 219 SER HB3 H N N 220 SER HG H N N 221 SER HXT H N N 222 THR N N N N 223 THR CA C N S 224 THR C C N N 225 THR O O N N 226 THR CB C N R 227 THR OG1 O N N 228 THR CG2 C N N 229 THR OXT O N N 230 THR H H N N 231 THR H2 H N N 232 THR HA H N N 233 THR HB H N N 234 THR HG1 H N N 235 THR HG21 H N N 236 THR HG22 H N N 237 THR HG23 H N N 238 THR HXT H N N 239 TYR N N N N 240 TYR CA C N S 241 TYR C C N N 242 TYR O O N N 243 TYR CB C N N 244 TYR CG C Y N 245 TYR CD1 C Y N 246 TYR CD2 C Y N 247 TYR CE1 C Y N 248 TYR CE2 C Y N 249 TYR CZ C Y N 250 TYR OH O N N 251 TYR OXT O N N 252 TYR H H N N 253 TYR H2 H N N 254 TYR HA H N N 255 TYR HB2 H N N 256 TYR HB3 H N N 257 TYR HD1 H N N 258 TYR HD2 H N N 259 TYR HE1 H N N 260 TYR HE2 H N N 261 TYR HH H N N 262 TYR HXT H N N 263 VAL N N N N 264 VAL CA C N S 265 VAL C C N N 266 VAL O O N N 267 VAL CB C N N 268 VAL CG1 C N N 269 VAL CG2 C N N 270 VAL OXT O N N 271 VAL H H N N 272 VAL H2 H N N 273 VAL HA H N N 274 VAL HB H N N 275 VAL HG11 H N N 276 VAL HG12 H N N 277 VAL HG13 H N N 278 VAL HG21 H N N 279 VAL HG22 H N N 280 VAL HG23 H N N 281 VAL HXT H N N 282 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASN N CA sing N N 13 ASN N H sing N N 14 ASN N H2 sing N N 15 ASN CA C sing N N 16 ASN CA CB sing N N 17 ASN CA HA sing N N 18 ASN C O doub N N 19 ASN C OXT sing N N 20 ASN CB CG sing N N 21 ASN CB HB2 sing N N 22 ASN CB HB3 sing N N 23 ASN CG OD1 doub N N 24 ASN CG ND2 sing N N 25 ASN ND2 HD21 sing N N 26 ASN ND2 HD22 sing N N 27 ASN OXT HXT sing N N 28 ASP N CA sing N N 29 ASP N H sing N N 30 ASP N H2 sing N N 31 ASP CA C sing N N 32 ASP CA CB sing N N 33 ASP CA HA sing N N 34 ASP C O doub N N 35 ASP C OXT sing N N 36 ASP CB CG sing N N 37 ASP CB HB2 sing N N 38 ASP CB HB3 sing N N 39 ASP CG OD1 doub N N 40 ASP CG OD2 sing N N 41 ASP OD2 HD2 sing N N 42 ASP OXT HXT sing N N 43 GLN N CA sing N N 44 GLN N H sing N N 45 GLN N H2 sing N N 46 GLN CA C sing N N 47 GLN CA CB sing N N 48 GLN CA HA sing N N 49 GLN C O doub N N 50 GLN C OXT sing N N 51 GLN CB CG sing N N 52 GLN CB HB2 sing N N 53 GLN CB HB3 sing N N 54 GLN CG CD sing N N 55 GLN CG HG2 sing N N 56 GLN CG HG3 sing N N 57 GLN CD OE1 doub N N 58 GLN CD NE2 sing N N 59 GLN NE2 HE21 sing N N 60 GLN NE2 HE22 sing N N 61 GLN OXT HXT sing N N 62 GLU N CA sing N N 63 GLU N H sing N N 64 GLU N H2 sing N N 65 GLU CA C sing N N 66 GLU CA CB sing N N 67 GLU CA HA sing N N 68 GLU C O doub N N 69 GLU C OXT sing N N 70 GLU CB CG sing N N 71 GLU CB HB2 sing N N 72 GLU CB HB3 sing N N 73 GLU CG CD sing N N 74 GLU CG HG2 sing N N 75 GLU CG HG3 sing N N 76 GLU CD OE1 doub N N 77 GLU CD OE2 sing N N 78 GLU OE2 HE2 sing N N 79 GLU OXT HXT sing N N 80 GLY N CA sing N N 81 GLY N H sing N N 82 GLY N H2 sing N N 83 GLY CA C sing N N 84 GLY CA HA2 sing N N 85 GLY CA HA3 sing N N 86 GLY C O doub N N 87 GLY C OXT sing N N 88 GLY OXT HXT sing N N 89 HOH O H1 sing N N 90 HOH O H2 sing N N 91 ILE N CA sing N N 92 ILE N H sing N N 93 ILE N H2 sing N N 94 ILE CA C sing N N 95 ILE CA CB sing N N 96 ILE CA HA sing N N 97 ILE C O doub N N 98 ILE C OXT sing N N 99 ILE CB CG1 sing N N 100 ILE CB CG2 sing N N 101 ILE CB HB sing N N 102 ILE CG1 CD1 sing N N 103 ILE CG1 HG12 sing N N 104 ILE CG1 HG13 sing N N 105 ILE CG2 HG21 sing N N 106 ILE CG2 HG22 sing N N 107 ILE CG2 HG23 sing N N 108 ILE CD1 HD11 sing N N 109 ILE CD1 HD12 sing N N 110 ILE CD1 HD13 sing N N 111 ILE OXT HXT sing N N 112 LEU N CA sing N N 113 LEU N H sing N N 114 LEU N H2 sing N N 115 LEU CA C sing N N 116 LEU CA CB sing N N 117 LEU CA HA sing N N 118 LEU C O doub N N 119 LEU C OXT sing N N 120 LEU CB CG sing N N 121 LEU CB HB2 sing N N 122 LEU CB HB3 sing N N 123 LEU CG CD1 sing N N 124 LEU CG CD2 sing N N 125 LEU CG HG sing N N 126 LEU CD1 HD11 sing N N 127 LEU CD1 HD12 sing N N 128 LEU CD1 HD13 sing N N 129 LEU CD2 HD21 sing N N 130 LEU CD2 HD22 sing N N 131 LEU CD2 HD23 sing N N 132 LEU OXT HXT sing N N 133 LYS N CA sing N N 134 LYS N H sing N N 135 LYS N H2 sing N N 136 LYS CA C sing N N 137 LYS CA CB sing N N 138 LYS CA HA sing N N 139 LYS C O doub N N 140 LYS C OXT sing N N 141 LYS CB CG sing N N 142 LYS CB HB2 sing N N 143 LYS CB HB3 sing N N 144 LYS CG CD sing N N 145 LYS CG HG2 sing N N 146 LYS CG HG3 sing N N 147 LYS CD CE sing N N 148 LYS CD HD2 sing N N 149 LYS CD HD3 sing N N 150 LYS CE NZ sing N N 151 LYS CE HE2 sing N N 152 LYS CE HE3 sing N N 153 LYS NZ HZ1 sing N N 154 LYS NZ HZ2 sing N N 155 LYS NZ HZ3 sing N N 156 LYS OXT HXT sing N N 157 PHE N CA sing N N 158 PHE N H sing N N 159 PHE N H2 sing N N 160 PHE CA C sing N N 161 PHE CA CB sing N N 162 PHE CA HA sing N N 163 PHE C O doub N N 164 PHE C OXT sing N N 165 PHE CB CG sing N N 166 PHE CB HB2 sing N N 167 PHE CB HB3 sing N N 168 PHE CG CD1 doub Y N 169 PHE CG CD2 sing Y N 170 PHE CD1 CE1 sing Y N 171 PHE CD1 HD1 sing N N 172 PHE CD2 CE2 doub Y N 173 PHE CD2 HD2 sing N N 174 PHE CE1 CZ doub Y N 175 PHE CE1 HE1 sing N N 176 PHE CE2 CZ sing Y N 177 PHE CE2 HE2 sing N N 178 PHE CZ HZ sing N N 179 PHE OXT HXT sing N N 180 PRO N CA sing N N 181 PRO N CD sing N N 182 PRO N H sing N N 183 PRO CA C sing N N 184 PRO CA CB sing N N 185 PRO CA HA sing N N 186 PRO C O doub N N 187 PRO C OXT sing N N 188 PRO CB CG sing N N 189 PRO CB HB2 sing N N 190 PRO CB HB3 sing N N 191 PRO CG CD sing N N 192 PRO CG HG2 sing N N 193 PRO CG HG3 sing N N 194 PRO CD HD2 sing N N 195 PRO CD HD3 sing N N 196 PRO OXT HXT sing N N 197 SER N CA sing N N 198 SER N H sing N N 199 SER N H2 sing N N 200 SER CA C sing N N 201 SER CA CB sing N N 202 SER CA HA sing N N 203 SER C O doub N N 204 SER C OXT sing N N 205 SER CB OG sing N N 206 SER CB HB2 sing N N 207 SER CB HB3 sing N N 208 SER OG HG sing N N 209 SER OXT HXT sing N N 210 THR N CA sing N N 211 THR N H sing N N 212 THR N H2 sing N N 213 THR CA C sing N N 214 THR CA CB sing N N 215 THR CA HA sing N N 216 THR C O doub N N 217 THR C OXT sing N N 218 THR CB OG1 sing N N 219 THR CB CG2 sing N N 220 THR CB HB sing N N 221 THR OG1 HG1 sing N N 222 THR CG2 HG21 sing N N 223 THR CG2 HG22 sing N N 224 THR CG2 HG23 sing N N 225 THR OXT HXT sing N N 226 TYR N CA sing N N 227 TYR N H sing N N 228 TYR N H2 sing N N 229 TYR CA C sing N N 230 TYR CA CB sing N N 231 TYR CA HA sing N N 232 TYR C O doub N N 233 TYR C OXT sing N N 234 TYR CB CG sing N N 235 TYR CB HB2 sing N N 236 TYR CB HB3 sing N N 237 TYR CG CD1 doub Y N 238 TYR CG CD2 sing Y N 239 TYR CD1 CE1 sing Y N 240 TYR CD1 HD1 sing N N 241 TYR CD2 CE2 doub Y N 242 TYR CD2 HD2 sing N N 243 TYR CE1 CZ doub Y N 244 TYR CE1 HE1 sing N N 245 TYR CE2 CZ sing Y N 246 TYR CE2 HE2 sing N N 247 TYR CZ OH sing N N 248 TYR OH HH sing N N 249 TYR OXT HXT sing N N 250 VAL N CA sing N N 251 VAL N H sing N N 252 VAL N H2 sing N N 253 VAL CA C sing N N 254 VAL CA CB sing N N 255 VAL CA HA sing N N 256 VAL C O doub N N 257 VAL C OXT sing N N 258 VAL CB CG1 sing N N 259 VAL CB CG2 sing N N 260 VAL CB HB sing N N 261 VAL CG1 HG11 sing N N 262 VAL CG1 HG12 sing N N 263 VAL CG1 HG13 sing N N 264 VAL CG2 HG21 sing N N 265 VAL CG2 HG22 sing N N 266 VAL CG2 HG23 sing N N 267 VAL OXT HXT sing N N 268 # _atom_sites.entry_id 1IG5 _atom_sites.fract_transf_matrix[1][1] 0.029647 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029647 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007724 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O # loop_