data_1IOJ # _entry.id 1IOJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1IOJ pdb_00001ioj 10.2210/pdb1ioj/pdb WWPDB D_1000174223 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-08-12 2 'Structure model' 1 1 2008-03-04 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-03-14 5 'Structure model' 1 4 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Experimental preparation' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' 8 4 'Structure model' 'Source and taxonomy' 9 4 'Structure model' 'Structure summary' 10 5 'Structure model' 'Data collection' 11 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity 2 4 'Structure model' entity_src_gen 3 4 'Structure model' pdbx_database_status 4 4 'Structure model' pdbx_entity_src_syn 5 4 'Structure model' pdbx_nmr_exptl 6 4 'Structure model' pdbx_nmr_exptl_sample 7 4 'Structure model' pdbx_nmr_refine 8 4 'Structure model' pdbx_nmr_sample_details 9 4 'Structure model' pdbx_nmr_software 10 4 'Structure model' pdbx_nmr_spectrometer 11 4 'Structure model' pdbx_struct_assembly 12 4 'Structure model' pdbx_struct_assembly_prop 13 4 'Structure model' pdbx_struct_oper_list 14 5 'Structure model' chem_comp_atom 15 5 'Structure model' chem_comp_bond 16 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity.src_method' 2 4 'Structure model' '_pdbx_database_status.process_site' 3 4 'Structure model' '_pdbx_nmr_refine.details' 4 4 'Structure model' '_pdbx_nmr_spectrometer.field_strength' 5 5 'Structure model' '_database_2.pdbx_DOI' 6 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1IOJ _pdbx_database_status.recvd_initial_deposition_date 1998-05-12 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Rozek, A.' 1 ? 'Sparrow, J.T.' 2 ? 'Weisgraber, K.H.' 3 ? 'Cushley, R.J.' 4 ? # _citation.id primary _citation.title 'Conformation of human apolipoprotein C-I in a lipid-mimetic environment determined by CD and NMR spectroscopy.' _citation.journal_abbrev Biochemistry _citation.journal_volume 38 _citation.page_first 14475 _citation.page_last 14484 _citation.year 1999 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10545169 _citation.pdbx_database_id_DOI 10.1021/bi982966h # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Rozek, A.' 1 ? primary 'Sparrow, J.T.' 2 ? primary 'Weisgraber, K.H.' 3 ? primary 'Cushley, R.J.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description APOC-I _entity.formula_weight 6642.585 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code TPDVSSALDKLKEFGNTLEDKARELISRIKQSELSAKMREWFSETFQKVKEKLKIDS _entity_poly.pdbx_seq_one_letter_code_can TPDVSSALDKLKEFGNTLEDKARELISRIKQSELSAKMREWFSETFQKVKEKLKIDS _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PRO n 1 3 ASP n 1 4 VAL n 1 5 SER n 1 6 SER n 1 7 ALA n 1 8 LEU n 1 9 ASP n 1 10 LYS n 1 11 LEU n 1 12 LYS n 1 13 GLU n 1 14 PHE n 1 15 GLY n 1 16 ASN n 1 17 THR n 1 18 LEU n 1 19 GLU n 1 20 ASP n 1 21 LYS n 1 22 ALA n 1 23 ARG n 1 24 GLU n 1 25 LEU n 1 26 ILE n 1 27 SER n 1 28 ARG n 1 29 ILE n 1 30 LYS n 1 31 GLN n 1 32 SER n 1 33 GLU n 1 34 LEU n 1 35 SER n 1 36 ALA n 1 37 LYS n 1 38 MET n 1 39 ARG n 1 40 GLU n 1 41 TRP n 1 42 PHE n 1 43 SER n 1 44 GLU n 1 45 THR n 1 46 PHE n 1 47 GLN n 1 48 LYS n 1 49 VAL n 1 50 LYS n 1 51 GLU n 1 52 LYS n 1 53 LEU n 1 54 LYS n 1 55 ILE n 1 56 ASP n 1 57 SER n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 ASN 16 16 16 ASN ASN A . n A 1 17 THR 17 17 17 THR THR A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 MET 38 38 38 MET MET A . n A 1 39 ARG 39 39 39 ARG ARG A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 TRP 41 41 41 TRP TRP A . n A 1 42 PHE 42 42 42 PHE PHE A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 SER 57 57 57 SER SER A . n # _cell.entry_id 1IOJ _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IOJ _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 1IOJ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 1IOJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] -1.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1IOJ _struct.title 'HUMAN APOLIPOPROTEIN C-I, NMR, 18 STRUCTURES' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1IOJ _struct_keywords.pdbx_keywords APOLIPOPROTEIN _struct_keywords.text 'APOLIPOPROTEIN, AMPHIPATHIC HELIX, LIPID ASSOCIATION, LCAT ACTIVATION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag Y _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code APOC1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P02654 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MRLFLSLPVLVVVLSIVLEGPAPAQGTPDVSSALDKLKEFGNTLEDKARELISRIKQSELSAKMREWFSETFQKVKEKLK IDS ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1IOJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 57 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02654 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 83 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 57 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 5620 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 8 ? LEU A 11 ? LEU A 8 LEU A 11 1 ? 4 HELX_P HELX_P2 2 PHE A 14 ? ILE A 29 ? PHE A 14 ILE A 29 1 ? 16 HELX_P HELX_P3 3 LYS A 37 ? LYS A 50 ? LYS A 37 LYS A 50 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 123.96 120.30 3.66 0.50 N 2 1 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.14 120.30 3.84 0.50 N 3 1 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.06 120.30 3.76 0.50 N 4 2 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.03 120.30 3.73 0.50 N 5 2 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.06 120.30 3.76 0.50 N 6 2 N A MET 38 ? ? CA A MET 38 ? ? CB A MET 38 ? ? 99.07 110.60 -11.53 1.80 N 7 2 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.25 120.30 3.95 0.50 N 8 3 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.06 120.30 3.76 0.50 N 9 3 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.14 120.30 3.84 0.50 N 10 3 N A GLU 33 ? ? CA A GLU 33 ? ? CB A GLU 33 ? ? 121.68 110.60 11.08 1.80 N 11 3 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 123.98 120.30 3.68 0.50 N 12 4 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.01 120.30 3.71 0.50 N 13 4 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 123.99 120.30 3.69 0.50 N 14 4 N A MET 38 ? ? CA A MET 38 ? ? CB A MET 38 ? ? 98.44 110.60 -12.16 1.80 N 15 4 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.05 120.30 3.75 0.50 N 16 5 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.14 120.30 3.84 0.50 N 17 5 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 123.99 120.30 3.69 0.50 N 18 5 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.06 120.30 3.76 0.50 N 19 6 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.24 120.30 3.94 0.50 N 20 6 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.01 120.30 3.71 0.50 N 21 6 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.05 120.30 3.75 0.50 N 22 7 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.06 120.30 3.76 0.50 N 23 7 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.01 120.30 3.71 0.50 N 24 7 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.18 120.30 3.88 0.50 N 25 8 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.08 120.30 3.78 0.50 N 26 8 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.17 120.30 3.87 0.50 N 27 8 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 123.80 120.30 3.50 0.50 N 28 9 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.00 120.30 3.70 0.50 N 29 9 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.05 120.30 3.75 0.50 N 30 9 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.30 120.30 4.00 0.50 N 31 10 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.02 120.30 3.72 0.50 N 32 10 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.24 120.30 3.94 0.50 N 33 10 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.02 120.30 3.72 0.50 N 34 11 CB A VAL 4 ? ? CA A VAL 4 ? ? C A VAL 4 ? ? 122.96 111.40 11.56 1.90 N 35 11 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 123.96 120.30 3.66 0.50 N 36 11 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.03 120.30 3.73 0.50 N 37 11 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.05 120.30 3.75 0.50 N 38 12 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.29 120.30 3.99 0.50 N 39 12 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.14 120.30 3.84 0.50 N 40 12 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 123.91 120.30 3.61 0.50 N 41 13 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.03 120.30 3.73 0.50 N 42 13 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.31 120.30 4.01 0.50 N 43 13 N A ALA 36 ? ? CA A ALA 36 ? ? CB A ALA 36 ? ? 121.10 110.10 11.00 1.40 N 44 13 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.36 120.30 4.06 0.50 N 45 14 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.06 120.30 3.76 0.50 N 46 14 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.21 120.30 3.91 0.50 N 47 14 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 123.92 120.30 3.62 0.50 N 48 14 N A GLU 40 ? ? CA A GLU 40 ? ? CB A GLU 40 ? ? 121.60 110.60 11.00 1.80 N 49 15 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 123.93 120.30 3.63 0.50 N 50 15 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.12 120.30 3.82 0.50 N 51 15 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.08 120.30 3.78 0.50 N 52 16 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.01 120.30 3.71 0.50 N 53 16 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.06 120.30 3.76 0.50 N 54 16 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.22 120.30 3.92 0.50 N 55 17 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.00 120.30 3.70 0.50 N 56 17 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.07 120.30 3.77 0.50 N 57 17 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.14 120.30 3.84 0.50 N 58 18 NE A ARG 23 ? ? CZ A ARG 23 ? ? NH1 A ARG 23 ? ? 124.04 120.30 3.74 0.50 N 59 18 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.12 120.30 3.82 0.50 N 60 18 CB A LEU 34 ? ? CA A LEU 34 ? ? C A LEU 34 ? ? 125.79 110.20 15.59 1.90 N 61 18 NE A ARG 39 ? ? CZ A ARG 39 ? ? NH1 A ARG 39 ? ? 124.25 120.30 3.95 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 5 ? ? -152.38 73.21 2 1 ALA A 7 ? ? -121.58 -66.32 3 1 GLU A 24 ? ? 169.28 -62.76 4 1 ARG A 28 ? ? 141.66 -53.52 5 1 ILE A 29 ? ? -76.36 -81.65 6 1 SER A 32 ? ? -117.90 -97.41 7 1 SER A 35 ? ? -87.03 -110.03 8 1 ALA A 36 ? ? 70.23 -68.92 9 1 GLU A 44 ? ? 175.10 -63.73 10 1 LEU A 53 ? ? -103.17 -128.48 11 1 LYS A 54 ? ? 59.10 -113.97 12 1 ILE A 55 ? ? -92.18 -67.91 13 1 ASP A 56 ? ? -140.65 -87.18 14 2 VAL A 4 ? ? -128.94 -121.72 15 2 ALA A 7 ? ? -130.80 -56.67 16 2 LYS A 12 ? ? 70.37 -76.00 17 2 LEU A 18 ? ? -98.72 46.10 18 2 GLU A 19 ? ? -117.51 52.18 19 2 ASP A 20 ? ? -171.27 -55.63 20 2 ARG A 23 ? ? -122.33 -60.35 21 2 ILE A 29 ? ? -100.72 -70.44 22 2 LEU A 53 ? ? -100.29 -68.64 23 2 ILE A 55 ? ? 65.33 89.18 24 3 VAL A 4 ? ? -100.56 -148.00 25 3 SER A 6 ? ? -172.90 -70.41 26 3 ALA A 7 ? ? 76.62 -33.45 27 3 ILE A 29 ? ? -68.05 -82.55 28 3 GLN A 31 ? ? 54.14 74.18 29 3 SER A 32 ? ? 71.95 153.54 30 3 GLU A 33 ? ? 127.44 -42.01 31 3 SER A 35 ? ? -79.97 -110.49 32 3 ALA A 36 ? ? 71.18 -66.48 33 3 MET A 38 ? ? -68.95 0.61 34 3 ARG A 39 ? ? -122.57 -63.37 35 3 GLU A 44 ? ? 171.52 -69.46 36 3 PHE A 46 ? ? -91.37 -64.00 37 3 LYS A 54 ? ? 55.92 -173.17 38 3 ILE A 55 ? ? -113.74 -79.17 39 3 ASP A 56 ? ? -87.83 -80.07 40 4 ASP A 3 ? ? 177.22 146.70 41 4 VAL A 4 ? ? -114.94 -129.93 42 4 ALA A 7 ? ? -137.92 -44.39 43 4 LYS A 12 ? ? 68.75 -76.44 44 4 ILE A 29 ? ? -78.49 -93.63 45 4 LYS A 30 ? ? 56.35 2.87 46 4 GLN A 31 ? ? -161.23 -8.02 47 4 GLU A 33 ? ? 69.06 -9.07 48 4 SER A 35 ? ? -161.02 105.57 49 4 LYS A 54 ? ? 91.25 96.98 50 5 ASP A 3 ? ? 71.25 -92.84 51 5 VAL A 4 ? ? -131.73 -60.92 52 5 ALA A 7 ? ? -101.81 -61.93 53 5 LEU A 18 ? ? -80.64 32.60 54 5 GLU A 19 ? ? -91.43 -66.02 55 5 GLU A 33 ? ? 72.54 -23.78 56 5 SER A 35 ? ? -76.29 -112.13 57 5 ALA A 36 ? ? 66.31 -64.60 58 5 ARG A 39 ? ? -135.07 -71.01 59 5 GLN A 47 ? ? 114.31 -54.05 60 5 LYS A 52 ? ? -106.69 62.94 61 5 LYS A 54 ? ? -115.67 -80.49 62 5 ASP A 56 ? ? -151.23 -88.64 63 6 ASP A 3 ? ? 61.91 -96.60 64 6 VAL A 4 ? ? -136.59 -131.12 65 6 SER A 6 ? ? 61.57 60.43 66 6 LEU A 18 ? ? 78.96 -29.46 67 6 GLU A 19 ? ? -91.14 -74.29 68 6 GLU A 24 ? ? 171.83 -60.21 69 6 ILE A 29 ? ? -73.49 -85.96 70 6 SER A 32 ? ? 80.22 136.62 71 6 GLU A 33 ? ? -74.41 24.01 72 6 SER A 35 ? ? -67.06 -160.03 73 6 ALA A 36 ? ? 64.37 -53.16 74 6 ASP A 56 ? ? -142.61 -92.73 75 7 LEU A 25 ? ? -93.38 45.77 76 7 ILE A 26 ? ? -123.62 -54.46 77 7 ARG A 28 ? ? 148.82 -63.61 78 7 ILE A 29 ? ? -74.22 -84.07 79 7 GLU A 33 ? ? 69.30 -38.40 80 7 SER A 35 ? ? -94.19 -126.30 81 7 ALA A 36 ? ? 62.31 -49.41 82 7 GLU A 40 ? ? 151.04 -68.10 83 7 GLU A 44 ? ? 174.02 -64.46 84 7 GLN A 47 ? ? 126.72 -50.73 85 8 VAL A 4 ? ? -84.29 -76.78 86 8 ILE A 29 ? ? -81.22 -93.62 87 8 LYS A 30 ? ? 56.46 -10.48 88 8 GLN A 31 ? ? -147.82 -88.33 89 8 SER A 32 ? ? -163.48 82.91 90 8 GLU A 33 ? ? 34.65 32.02 91 8 GLU A 40 ? ? 103.26 -61.61 92 8 GLN A 47 ? ? 156.67 -61.30 93 8 LEU A 53 ? ? 85.09 -83.45 94 8 LYS A 54 ? ? 75.93 148.16 95 8 ASP A 56 ? ? -73.53 -81.19 96 9 ASP A 3 ? ? 56.89 95.34 97 9 VAL A 4 ? ? -82.64 -83.56 98 9 ASN A 16 ? ? -81.76 -152.34 99 9 THR A 17 ? ? 67.75 -87.20 100 9 ILE A 29 ? ? -71.77 -78.76 101 9 SER A 32 ? ? -137.73 -93.73 102 9 SER A 35 ? ? -84.26 -103.63 103 9 ALA A 36 ? ? 74.78 -68.75 104 9 GLU A 44 ? ? 161.01 -68.51 105 9 GLN A 47 ? ? 157.30 -59.35 106 9 ILE A 55 ? ? 73.87 99.69 107 9 ASP A 56 ? ? -73.17 -70.95 108 10 VAL A 4 ? ? -138.27 -113.29 109 10 SER A 6 ? ? -157.98 -62.83 110 10 LEU A 11 ? ? -135.53 -68.11 111 10 PHE A 14 ? ? -156.80 -52.55 112 10 ILE A 29 ? ? -72.73 -87.59 113 10 LYS A 30 ? ? 52.31 15.21 114 10 GLN A 31 ? ? -149.81 -40.92 115 10 GLU A 33 ? ? 78.33 -21.01 116 10 SER A 35 ? ? -86.59 -108.23 117 10 ALA A 36 ? ? 68.88 -67.52 118 10 GLN A 47 ? ? 161.34 -59.67 119 10 LEU A 53 ? ? -146.58 -36.12 120 10 LYS A 54 ? ? 79.65 -79.52 121 10 ILE A 55 ? ? -133.86 -65.07 122 10 ASP A 56 ? ? -106.76 -90.64 123 11 VAL A 4 ? ? -107.29 -99.41 124 11 ILE A 29 ? ? -68.31 -79.70 125 11 LYS A 30 ? ? 59.20 72.54 126 11 GLN A 31 ? ? 76.37 -26.43 127 11 GLU A 33 ? ? 68.27 -30.23 128 11 SER A 35 ? ? -83.34 -125.19 129 11 ALA A 36 ? ? 66.47 -65.73 130 11 GLU A 40 ? ? 159.05 -66.53 131 11 LEU A 53 ? ? -140.05 -42.10 132 11 ILE A 55 ? ? 80.26 118.38 133 11 ASP A 56 ? ? 76.29 -86.81 134 12 ASP A 3 ? ? 72.62 -93.69 135 12 VAL A 4 ? ? -135.88 -146.61 136 12 SER A 6 ? ? 67.12 68.71 137 12 ALA A 7 ? ? -150.46 -59.78 138 12 PHE A 14 ? ? -156.35 -57.11 139 12 ILE A 29 ? ? -71.29 -74.90 140 12 GLU A 33 ? ? 78.93 -26.22 141 12 GLU A 44 ? ? 164.37 -71.40 142 12 PHE A 46 ? ? -92.10 -62.91 143 12 LYS A 54 ? ? -137.44 -67.10 144 13 VAL A 4 ? ? -134.42 -48.72 145 13 ALA A 7 ? ? -91.18 -62.40 146 13 ILE A 29 ? ? -73.09 -73.91 147 13 LYS A 30 ? ? 61.33 62.59 148 13 ALA A 36 ? ? 112.46 -47.62 149 13 ARG A 39 ? ? -138.82 -56.73 150 13 PHE A 46 ? ? -148.00 -65.19 151 13 LYS A 52 ? ? -114.18 54.31 152 13 ASP A 56 ? ? -115.15 -93.37 153 14 VAL A 4 ? ? -117.89 -79.01 154 14 ALA A 7 ? ? -136.46 -74.29 155 14 LEU A 8 ? ? -100.52 55.38 156 14 ASP A 9 ? ? -106.13 53.15 157 14 LEU A 11 ? ? 34.46 58.40 158 14 ARG A 28 ? ? 153.82 -63.48 159 14 ILE A 29 ? ? -69.34 -84.84 160 14 LYS A 30 ? ? 56.27 11.59 161 14 GLN A 31 ? ? -150.96 -44.91 162 14 GLU A 33 ? ? 76.97 -18.17 163 14 SER A 35 ? ? -85.20 -120.28 164 14 ALA A 36 ? ? 63.70 -47.42 165 14 GLU A 40 ? ? 126.68 -62.63 166 14 LEU A 53 ? ? 98.39 -65.82 167 14 LYS A 54 ? ? 72.75 112.91 168 14 ASP A 56 ? ? -76.35 -76.09 169 15 ILE A 29 ? ? -76.63 -77.55 170 15 GLU A 33 ? ? 82.20 -39.87 171 15 SER A 35 ? ? -81.95 -112.39 172 15 ALA A 36 ? ? 67.05 -67.33 173 15 LYS A 54 ? ? -155.61 -61.77 174 15 ASP A 56 ? ? -96.79 -83.74 175 16 ALA A 7 ? ? 83.73 -45.08 176 16 LEU A 8 ? ? -150.38 -68.31 177 16 LYS A 12 ? ? -119.33 58.55 178 16 GLU A 13 ? ? -177.43 -56.44 179 16 LYS A 30 ? ? -69.64 1.66 180 16 GLN A 47 ? ? 158.25 -59.83 181 16 LYS A 52 ? ? -91.82 -67.69 182 16 ASP A 56 ? ? -78.96 -75.20 183 17 ASP A 3 ? ? -73.06 -76.41 184 17 VAL A 4 ? ? -148.64 -72.52 185 17 ALA A 7 ? ? -91.10 -60.45 186 17 ARG A 28 ? ? -167.15 -41.83 187 17 GLU A 33 ? ? 69.69 -19.22 188 17 ARG A 39 ? ? -136.04 -53.88 189 17 LYS A 54 ? ? 69.75 95.29 190 17 ASP A 56 ? ? -141.38 -93.61 191 18 SER A 5 ? ? 69.36 -11.16 192 18 SER A 6 ? ? -161.42 57.47 193 18 ALA A 7 ? ? -171.27 -68.89 194 18 PHE A 14 ? ? -157.23 -53.18 195 18 SER A 35 ? ? -4.86 121.71 196 18 LEU A 53 ? ? 89.40 -53.52 197 18 LYS A 54 ? ? 75.17 84.66 198 18 ILE A 55 ? ? 71.61 96.10 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 2 LEU A 18 ? ? GLU A 19 ? ? 137.49 2 2 GLU A 33 ? ? LEU A 34 ? ? 149.05 3 4 GLU A 33 ? ? LEU A 34 ? ? 141.07 4 5 GLU A 33 ? ? LEU A 34 ? ? 144.46 5 6 GLY A 15 ? ? ASN A 16 ? ? 141.49 6 6 LEU A 34 ? ? SER A 35 ? ? 148.72 7 6 SER A 35 ? ? ALA A 36 ? ? -149.07 8 7 GLU A 33 ? ? LEU A 34 ? ? 149.44 9 11 GLU A 33 ? ? LEU A 34 ? ? 142.74 10 12 SER A 35 ? ? ALA A 36 ? ? 147.59 11 13 GLU A 33 ? ? LEU A 34 ? ? 146.65 12 13 SER A 35 ? ? ALA A 36 ? ? -144.54 13 17 GLU A 33 ? ? LEU A 34 ? ? 143.35 14 17 SER A 35 ? ? ALA A 36 ? ? 138.60 15 18 LEU A 34 ? ? SER A 35 ? ? -127.19 # _pdbx_nmr_ensemble.entry_id 1IOJ _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 18 _pdbx_nmr_ensemble.conformer_selection_criteria 'SELECTED STRUCTURES HAVE NO HELIX-HELIX CONTACTS <5 ANGSTROMS' # _pdbx_nmr_representative.entry_id 1IOJ _pdbx_nmr_representative.conformer_id 15 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '5.8 mM native apoC-I, 90%H2O/10%D2O, 232 mM SDS-D25' '90% H2O/10% D2O' sample_1 solution 'native apoC-I was isolated from blood plasma' 2 '5 mM selectively 15N-labeled synthetic apoC-I, 90%H2O/10%D2O, 200 mM SDS-D25' '90% H2O/10% D2O' sample_2 solution ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'native apoC-I' 5.8 ? mM 'natural abundance' 1 'synthetic apoC-I' 5 ? mM '[U-15N]' 2 SDS-D25 232 ? mM 'natural abundance' 1 SDS-D25 200 ? mM 'natural abundance' 2 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 323 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 4.8 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K _pdbx_nmr_exptl_sample_conditions.label ? _pdbx_nmr_exptl_sample_conditions.pH_units ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units ? # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 2D-NOESY 1 2 1 2D-TOCSY 2 3 1 DQF-COSY 2 4 1 '2D-15N-FILTERED NOESY' 2 5 1 '2D-15N-FILTERED TOCSY' 2 6 1 '2D 1H-15N HSQC' 2 7 1 3D-NOESY-HSQC 2 8 1 3D-TOCSY-HSQC 2 9 1 2D-NOESY 2 # _pdbx_nmr_details.entry_id 1IOJ _pdbx_nmr_details.text ;USING WATERGATE FOR WATER SUPPRESSION, 2D-TOCSY USING MLEV-17 FOR MIXING, 3D-TOCSY USING DIPSY-2RC FOR MIXING. 15N-FILTERED NOESY AND TOCSY INCLUDE DIFFERENCE (SHOWING ONLY 15N LABELED RESIDUES) AND SUM SPECTRA (SHOWING ONLY UNLABELED RESIDUES). ; # _pdbx_nmr_refine.entry_id 1IOJ _pdbx_nmr_refine.method 'DISTANCE GEOMETRY AND SIMULATED ANNEALING' _pdbx_nmr_refine.details ;THE STRUCTURE OF APOC-I(1-38) IN THE PRESENCE OF SODIUM DODECYL SULFATE WAS REFINED USING 685 NOE-BASED DISTANCE RESTRAINTS. NO DIHEDRAL RESTRAINTS AND NO H-BOND RESTRAINTS WERE USED. THIS ENTRY CONTAINS 18 ACCEPTED OUT OF 50 CALCULATED STRUCTURES. STRUCTURE CALCULATIONS WERE PERFORMED WITH THE PROGRAMS DGII AND DISCOVER INCLUDING DISTANCE GEOMETRY CALCULATIONS, SIMULATED ANNEALING AND ENERGY MINIMIZATION WITH A CONJUGATED GRADIENT. THE CVFF FORCEFIELD WAS USED. ALL FORMAL CHARGES WERE SWITCHED OFF. THE DIELECTRIC CONSTANT WAS SET TO 1. THE LENNARD-JONES POTENTIAL WAS USED FOR NON-BOND INTERACTIONS (CUTOFF 12A). FOR DETAILS ON STRUCTURE CALCULATION, RMSDS AND FINAL ENERGIES PLEASE SEE REFERENCE CITED UNDER "JRNL". ; _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement 'DGII, DISCOVER' DISCOVER 'MOLECULAR SIMULATIONS INC, SAN DIEGO' 1 'structure solution' 'DGII AND DISCOVER' DISCOVER 'MOLECULAR SIMULATIONS INC, SAN DIEGO' 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 ILE N N N N 123 ILE CA C N S 124 ILE C C N N 125 ILE O O N N 126 ILE CB C N S 127 ILE CG1 C N N 128 ILE CG2 C N N 129 ILE CD1 C N N 130 ILE OXT O N N 131 ILE H H N N 132 ILE H2 H N N 133 ILE HA H N N 134 ILE HB H N N 135 ILE HG12 H N N 136 ILE HG13 H N N 137 ILE HG21 H N N 138 ILE HG22 H N N 139 ILE HG23 H N N 140 ILE HD11 H N N 141 ILE HD12 H N N 142 ILE HD13 H N N 143 ILE HXT H N N 144 LEU N N N N 145 LEU CA C N S 146 LEU C C N N 147 LEU O O N N 148 LEU CB C N N 149 LEU CG C N N 150 LEU CD1 C N N 151 LEU CD2 C N N 152 LEU OXT O N N 153 LEU H H N N 154 LEU H2 H N N 155 LEU HA H N N 156 LEU HB2 H N N 157 LEU HB3 H N N 158 LEU HG H N N 159 LEU HD11 H N N 160 LEU HD12 H N N 161 LEU HD13 H N N 162 LEU HD21 H N N 163 LEU HD22 H N N 164 LEU HD23 H N N 165 LEU HXT H N N 166 LYS N N N N 167 LYS CA C N S 168 LYS C C N N 169 LYS O O N N 170 LYS CB C N N 171 LYS CG C N N 172 LYS CD C N N 173 LYS CE C N N 174 LYS NZ N N N 175 LYS OXT O N N 176 LYS H H N N 177 LYS H2 H N N 178 LYS HA H N N 179 LYS HB2 H N N 180 LYS HB3 H N N 181 LYS HG2 H N N 182 LYS HG3 H N N 183 LYS HD2 H N N 184 LYS HD3 H N N 185 LYS HE2 H N N 186 LYS HE3 H N N 187 LYS HZ1 H N N 188 LYS HZ2 H N N 189 LYS HZ3 H N N 190 LYS HXT H N N 191 MET N N N N 192 MET CA C N S 193 MET C C N N 194 MET O O N N 195 MET CB C N N 196 MET CG C N N 197 MET SD S N N 198 MET CE C N N 199 MET OXT O N N 200 MET H H N N 201 MET H2 H N N 202 MET HA H N N 203 MET HB2 H N N 204 MET HB3 H N N 205 MET HG2 H N N 206 MET HG3 H N N 207 MET HE1 H N N 208 MET HE2 H N N 209 MET HE3 H N N 210 MET HXT H N N 211 PHE N N N N 212 PHE CA C N S 213 PHE C C N N 214 PHE O O N N 215 PHE CB C N N 216 PHE CG C Y N 217 PHE CD1 C Y N 218 PHE CD2 C Y N 219 PHE CE1 C Y N 220 PHE CE2 C Y N 221 PHE CZ C Y N 222 PHE OXT O N N 223 PHE H H N N 224 PHE H2 H N N 225 PHE HA H N N 226 PHE HB2 H N N 227 PHE HB3 H N N 228 PHE HD1 H N N 229 PHE HD2 H N N 230 PHE HE1 H N N 231 PHE HE2 H N N 232 PHE HZ H N N 233 PHE HXT H N N 234 PRO N N N N 235 PRO CA C N S 236 PRO C C N N 237 PRO O O N N 238 PRO CB C N N 239 PRO CG C N N 240 PRO CD C N N 241 PRO OXT O N N 242 PRO H H N N 243 PRO HA H N N 244 PRO HB2 H N N 245 PRO HB3 H N N 246 PRO HG2 H N N 247 PRO HG3 H N N 248 PRO HD2 H N N 249 PRO HD3 H N N 250 PRO HXT H N N 251 SER N N N N 252 SER CA C N S 253 SER C C N N 254 SER O O N N 255 SER CB C N N 256 SER OG O N N 257 SER OXT O N N 258 SER H H N N 259 SER H2 H N N 260 SER HA H N N 261 SER HB2 H N N 262 SER HB3 H N N 263 SER HG H N N 264 SER HXT H N N 265 THR N N N N 266 THR CA C N S 267 THR C C N N 268 THR O O N N 269 THR CB C N R 270 THR OG1 O N N 271 THR CG2 C N N 272 THR OXT O N N 273 THR H H N N 274 THR H2 H N N 275 THR HA H N N 276 THR HB H N N 277 THR HG1 H N N 278 THR HG21 H N N 279 THR HG22 H N N 280 THR HG23 H N N 281 THR HXT H N N 282 TRP N N N N 283 TRP CA C N S 284 TRP C C N N 285 TRP O O N N 286 TRP CB C N N 287 TRP CG C Y N 288 TRP CD1 C Y N 289 TRP CD2 C Y N 290 TRP NE1 N Y N 291 TRP CE2 C Y N 292 TRP CE3 C Y N 293 TRP CZ2 C Y N 294 TRP CZ3 C Y N 295 TRP CH2 C Y N 296 TRP OXT O N N 297 TRP H H N N 298 TRP H2 H N N 299 TRP HA H N N 300 TRP HB2 H N N 301 TRP HB3 H N N 302 TRP HD1 H N N 303 TRP HE1 H N N 304 TRP HE3 H N N 305 TRP HZ2 H N N 306 TRP HZ3 H N N 307 TRP HH2 H N N 308 TRP HXT H N N 309 VAL N N N N 310 VAL CA C N S 311 VAL C C N N 312 VAL O O N N 313 VAL CB C N N 314 VAL CG1 C N N 315 VAL CG2 C N N 316 VAL OXT O N N 317 VAL H H N N 318 VAL H2 H N N 319 VAL HA H N N 320 VAL HB H N N 321 VAL HG11 H N N 322 VAL HG12 H N N 323 VAL HG13 H N N 324 VAL HG21 H N N 325 VAL HG22 H N N 326 VAL HG23 H N N 327 VAL HXT H N N 328 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 ILE N CA sing N N 116 ILE N H sing N N 117 ILE N H2 sing N N 118 ILE CA C sing N N 119 ILE CA CB sing N N 120 ILE CA HA sing N N 121 ILE C O doub N N 122 ILE C OXT sing N N 123 ILE CB CG1 sing N N 124 ILE CB CG2 sing N N 125 ILE CB HB sing N N 126 ILE CG1 CD1 sing N N 127 ILE CG1 HG12 sing N N 128 ILE CG1 HG13 sing N N 129 ILE CG2 HG21 sing N N 130 ILE CG2 HG22 sing N N 131 ILE CG2 HG23 sing N N 132 ILE CD1 HD11 sing N N 133 ILE CD1 HD12 sing N N 134 ILE CD1 HD13 sing N N 135 ILE OXT HXT sing N N 136 LEU N CA sing N N 137 LEU N H sing N N 138 LEU N H2 sing N N 139 LEU CA C sing N N 140 LEU CA CB sing N N 141 LEU CA HA sing N N 142 LEU C O doub N N 143 LEU C OXT sing N N 144 LEU CB CG sing N N 145 LEU CB HB2 sing N N 146 LEU CB HB3 sing N N 147 LEU CG CD1 sing N N 148 LEU CG CD2 sing N N 149 LEU CG HG sing N N 150 LEU CD1 HD11 sing N N 151 LEU CD1 HD12 sing N N 152 LEU CD1 HD13 sing N N 153 LEU CD2 HD21 sing N N 154 LEU CD2 HD22 sing N N 155 LEU CD2 HD23 sing N N 156 LEU OXT HXT sing N N 157 LYS N CA sing N N 158 LYS N H sing N N 159 LYS N H2 sing N N 160 LYS CA C sing N N 161 LYS CA CB sing N N 162 LYS CA HA sing N N 163 LYS C O doub N N 164 LYS C OXT sing N N 165 LYS CB CG sing N N 166 LYS CB HB2 sing N N 167 LYS CB HB3 sing N N 168 LYS CG CD sing N N 169 LYS CG HG2 sing N N 170 LYS CG HG3 sing N N 171 LYS CD CE sing N N 172 LYS CD HD2 sing N N 173 LYS CD HD3 sing N N 174 LYS CE NZ sing N N 175 LYS CE HE2 sing N N 176 LYS CE HE3 sing N N 177 LYS NZ HZ1 sing N N 178 LYS NZ HZ2 sing N N 179 LYS NZ HZ3 sing N N 180 LYS OXT HXT sing N N 181 MET N CA sing N N 182 MET N H sing N N 183 MET N H2 sing N N 184 MET CA C sing N N 185 MET CA CB sing N N 186 MET CA HA sing N N 187 MET C O doub N N 188 MET C OXT sing N N 189 MET CB CG sing N N 190 MET CB HB2 sing N N 191 MET CB HB3 sing N N 192 MET CG SD sing N N 193 MET CG HG2 sing N N 194 MET CG HG3 sing N N 195 MET SD CE sing N N 196 MET CE HE1 sing N N 197 MET CE HE2 sing N N 198 MET CE HE3 sing N N 199 MET OXT HXT sing N N 200 PHE N CA sing N N 201 PHE N H sing N N 202 PHE N H2 sing N N 203 PHE CA C sing N N 204 PHE CA CB sing N N 205 PHE CA HA sing N N 206 PHE C O doub N N 207 PHE C OXT sing N N 208 PHE CB CG sing N N 209 PHE CB HB2 sing N N 210 PHE CB HB3 sing N N 211 PHE CG CD1 doub Y N 212 PHE CG CD2 sing Y N 213 PHE CD1 CE1 sing Y N 214 PHE CD1 HD1 sing N N 215 PHE CD2 CE2 doub Y N 216 PHE CD2 HD2 sing N N 217 PHE CE1 CZ doub Y N 218 PHE CE1 HE1 sing N N 219 PHE CE2 CZ sing Y N 220 PHE CE2 HE2 sing N N 221 PHE CZ HZ sing N N 222 PHE OXT HXT sing N N 223 PRO N CA sing N N 224 PRO N CD sing N N 225 PRO N H sing N N 226 PRO CA C sing N N 227 PRO CA CB sing N N 228 PRO CA HA sing N N 229 PRO C O doub N N 230 PRO C OXT sing N N 231 PRO CB CG sing N N 232 PRO CB HB2 sing N N 233 PRO CB HB3 sing N N 234 PRO CG CD sing N N 235 PRO CG HG2 sing N N 236 PRO CG HG3 sing N N 237 PRO CD HD2 sing N N 238 PRO CD HD3 sing N N 239 PRO OXT HXT sing N N 240 SER N CA sing N N 241 SER N H sing N N 242 SER N H2 sing N N 243 SER CA C sing N N 244 SER CA CB sing N N 245 SER CA HA sing N N 246 SER C O doub N N 247 SER C OXT sing N N 248 SER CB OG sing N N 249 SER CB HB2 sing N N 250 SER CB HB3 sing N N 251 SER OG HG sing N N 252 SER OXT HXT sing N N 253 THR N CA sing N N 254 THR N H sing N N 255 THR N H2 sing N N 256 THR CA C sing N N 257 THR CA CB sing N N 258 THR CA HA sing N N 259 THR C O doub N N 260 THR C OXT sing N N 261 THR CB OG1 sing N N 262 THR CB CG2 sing N N 263 THR CB HB sing N N 264 THR OG1 HG1 sing N N 265 THR CG2 HG21 sing N N 266 THR CG2 HG22 sing N N 267 THR CG2 HG23 sing N N 268 THR OXT HXT sing N N 269 TRP N CA sing N N 270 TRP N H sing N N 271 TRP N H2 sing N N 272 TRP CA C sing N N 273 TRP CA CB sing N N 274 TRP CA HA sing N N 275 TRP C O doub N N 276 TRP C OXT sing N N 277 TRP CB CG sing N N 278 TRP CB HB2 sing N N 279 TRP CB HB3 sing N N 280 TRP CG CD1 doub Y N 281 TRP CG CD2 sing Y N 282 TRP CD1 NE1 sing Y N 283 TRP CD1 HD1 sing N N 284 TRP CD2 CE2 doub Y N 285 TRP CD2 CE3 sing Y N 286 TRP NE1 CE2 sing Y N 287 TRP NE1 HE1 sing N N 288 TRP CE2 CZ2 sing Y N 289 TRP CE3 CZ3 doub Y N 290 TRP CE3 HE3 sing N N 291 TRP CZ2 CH2 doub Y N 292 TRP CZ2 HZ2 sing N N 293 TRP CZ3 CH2 sing Y N 294 TRP CZ3 HZ3 sing N N 295 TRP CH2 HH2 sing N N 296 TRP OXT HXT sing N N 297 VAL N CA sing N N 298 VAL N H sing N N 299 VAL N H2 sing N N 300 VAL CA C sing N N 301 VAL CA CB sing N N 302 VAL CA HA sing N N 303 VAL C O doub N N 304 VAL C OXT sing N N 305 VAL CB CG1 sing N N 306 VAL CB CG2 sing N N 307 VAL CB HB sing N N 308 VAL CG1 HG11 sing N N 309 VAL CG1 HG12 sing N N 310 VAL CG1 HG13 sing N N 311 VAL CG2 HG21 sing N N 312 VAL CG2 HG22 sing N N 313 VAL CG2 HG23 sing N N 314 VAL OXT HXT sing N N 315 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model 'AMX 600' _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.type ? # _atom_sites.entry_id 1IOJ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_