HEADER CHAPERONE 03-JUL-02 1J5U TITLE CRYSTAL STRUCTURE OF AN ARCHEASE, POSSIBLE CHAPERONE (TM1083) FROM TITLE 2 THERMOTOGA MARITIMA AT 2.0 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARCHEASE, POSSIBLE CHAPERONE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: TM1083; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ARCHEASE, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, KEYWDS 2 JCSG, PROTEIN STRUCTURE INITIATIVE, PSI, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 10 27-DEC-23 1J5U 1 REMARK LINK REVDAT 9 18-JUL-18 1J5U 1 REMARK REVDAT 8 04-OCT-17 1J5U 1 REMARK REVDAT 7 28-JUL-10 1J5U 1 HEADER TITLE KEYWDS REVDAT 6 24-FEB-09 1J5U 1 VERSN REVDAT 5 28-MAR-06 1J5U 1 AUTHOR JRNL REVDAT 4 18-JAN-05 1J5U 1 AUTHOR KEYWDS REMARK REVDAT 3 10-AUG-04 1J5U 1 TITLE JRNL KEYWDS COMPND REVDAT 2 08-JUL-03 1J5U 1 REMARK REVDAT 1 31-JUL-02 1J5U 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF ARCHEASE, POSSIBLE CHAPERONE (TM1083) JRNL TITL 2 FROM THERMOTOGA MARITIMA AT 2.0 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : STANDARD CNS DICTIONARY/ENGH AND HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 13430 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 674 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 13 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 930 REMARK 3 BIN R VALUE (WORKING SET) : 0.2102 REMARK 3 BIN FREE R VALUE : 0.2482 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 40 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1065 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.93 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 6.00 REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.540 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.413 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.005 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.682 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.827 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : BULK SOLVENT CORRECTION REMARK 3 KSOL : 0.36 REMARK 3 BSOL : 36.80 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SOME DENSITY PRESENT FOR THE FIRST 3 REMARK 3 RESIDUES IN THE HISTIDINE TAG, BUT TOO WEAK TO INTERPRET. THE REMARK 3 PACKING OF THE HISTIDINE TAG HAS DISRUPTED THE CONFORMATION OF REMARK 3 THE FIRST 7 RESIDUES AT THE N TERMINUS. REMARK 4 REMARK 4 1J5U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUL-02. REMARK 100 THE DEPOSITION ID IS D_1000001649. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 4.60 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.925223, 0.978645, 0.979029 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM, CCP4 REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13851 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 35.176 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07100 REMARK 200 FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.27700 REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE, CCP4, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.14 M CACL2; 14 % ISOPROP; 0.07 M REMARK 280 ACETATE PH 4.6, 30 % GLYCEROL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 NANODROP, TEMPERATURE 293K, PH 4.60 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+1/4,X+3/4,-Z+3/4 REMARK 290 14555 -Y+1/4,-X+1/4,-Z+1/4 REMARK 290 15555 Y+3/4,-X+3/4,Z+1/4 REMARK 290 16555 -Y+3/4,X+1/4,Z+3/4 REMARK 290 17555 X+1/4,Z+3/4,-Y+3/4 REMARK 290 18555 -X+3/4,Z+1/4,Y+3/4 REMARK 290 19555 -X+1/4,-Z+1/4,-Y+1/4 REMARK 290 20555 X+3/4,-Z+3/4,Y+1/4 REMARK 290 21555 Z+1/4,Y+3/4,-X+3/4 REMARK 290 22555 Z+3/4,-Y+3/4,X+1/4 REMARK 290 23555 -Z+3/4,Y+1/4,X+3/4 REMARK 290 24555 -Z+1/4,-Y+1/4,-X+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 52.64000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.64000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.64000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.64000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 52.64000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.64000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 52.64000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 52.64000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 52.64000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 52.64000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 52.64000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 52.64000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 52.64000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 52.64000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 52.64000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 52.64000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 52.64000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 52.64000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 26.32000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 78.96000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 78.96000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 26.32000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 26.32000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 26.32000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 78.96000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 78.96000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 26.32000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 78.96000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 26.32000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 78.96000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 26.32000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 78.96000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 78.96000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 78.96000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 26.32000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 78.96000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 26.32000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 26.32000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 26.32000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 78.96000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 78.96000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 26.32000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 26.32000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 78.96000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 78.96000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 78.96000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 78.96000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 26.32000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 78.96000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 26.32000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 78.96000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 26.32000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 26.32000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 26.32000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 ASP A -2 REMARK 465 LYS A -1 REMARK 465 ILE A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 81 -51.78 -124.85 REMARK 500 LEU A 112 12.72 58.86 REMARK 500 LYS A 114 113.34 -161.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 CALCIUM ION ASSIGNED BASED ON ELECTRON REMARK 600 DENSITY AND COORDINATION. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 13 O REMARK 620 2 ASP A 16 OD2 81.4 REMARK 620 3 ASP A 129 OD1 80.7 76.7 REMARK 620 4 THR A 130 OXT 158.9 80.8 84.1 REMARK 620 5 HOH A 308 O 78.1 74.9 146.6 108.0 REMARK 620 6 HOH A 358 O 87.6 142.0 65.6 99.5 138.0 REMARK 620 7 HOH A 378 O 69.7 148.7 109.1 129.7 87.3 50.7 REMARK 620 8 HOH A 408 O 132.4 119.5 142.4 67.3 68.8 94.7 75.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 282950 RELATED DB: TARGETDB DBREF 1J5U A 7 130 UNP Q9X0H1 Q9X0H1_THEMA 1 124 SEQRES 1 A 136 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 136 ARG LYS PRO ILE GLU HIS THR ALA ASP ILE ALA TYR GLU SEQRES 3 A 136 ILE SER GLY ASN SER TYR GLU GLU LEU LEU GLU GLU ALA SEQRES 4 A 136 ARG ASN ILE LEU LEU GLU GLU GLU GLY ILE VAL LEU ASP SEQRES 5 A 136 THR GLU GLU LYS GLU LYS MSE TYR PRO LEU GLU GLU THR SEQRES 6 A 136 GLU ASP ALA PHE PHE ASP THR VAL ASN ASP TRP ILE LEU SEQRES 7 A 136 GLU ILE SER LYS GLY TRP ALA PRO TRP ARG ILE LYS ARG SEQRES 8 A 136 GLU GLY ASN GLU LEU LYS VAL THR PHE ARG LYS ILE ARG SEQRES 9 A 136 LYS LYS GLU GLY THR GLU ILE LYS ALA LEU THR TYR HIS SEQRES 10 A 136 LEU LEU LYS PHE GLU ARG ASP GLY ASP VAL LEU LYS THR SEQRES 11 A 136 LYS VAL VAL PHE ASP THR MODRES 1J5U MSE A 7 MET SELENOMETHIONINE MODRES 1J5U MSE A 53 MET SELENOMETHIONINE HET MSE A 7 8 HET MSE A 53 8 HET CA A 301 1 HETNAM MSE SELENOMETHIONINE HETNAM CA CALCIUM ION FORMUL 1 MSE 2(C5 H11 N O2 SE) FORMUL 2 CA CA 2+ FORMUL 3 HOH *118(H2 O) HELIX 1 1 SER A 25 GLY A 42 1 18 HELIX 2 2 THR A 59 LYS A 76 1 18 SHEET 1 A 3 ILE A 17 GLY A 23 0 SHEET 2 A 3 VAL A 121 ASP A 129 -1 O LEU A 122 N GLY A 23 SHEET 3 A 3 ALA A 107 LEU A 108 -1 N ALA A 107 O ASP A 129 SHEET 1 B 3 ILE A 17 GLY A 23 0 SHEET 2 B 3 VAL A 121 ASP A 129 -1 O LEU A 122 N GLY A 23 SHEET 3 B 3 GLU A 116 ASP A 118 -1 N GLU A 116 O LYS A 123 SHEET 1 C 3 VAL A 44 PRO A 55 0 SHEET 2 C 3 GLU A 89 LYS A 99 -1 O PHE A 94 N LYS A 50 SHEET 3 C 3 TRP A 78 GLU A 86 -1 N LYS A 84 O LYS A 91 LINK C HIS A 6 N MSE A 7 1555 1555 1.33 LINK C MSE A 7 N ARG A 8 1555 1555 1.32 LINK C LYS A 52 N MSE A 53 1555 1555 1.33 LINK C MSE A 53 N TYR A 54 1555 1555 1.32 LINK O HIS A 13 CA CA A 301 1555 1555 2.46 LINK OD2 ASP A 16 CA CA A 301 1555 1555 2.47 LINK OD1 ASP A 129 CA CA A 301 1555 1555 2.40 LINK OXT THR A 130 CA CA A 301 1555 1555 2.52 LINK CA CA A 301 O HOH A 308 1555 1555 2.75 LINK CA CA A 301 O HOH A 358 1555 1555 3.24 LINK CA CA A 301 O HOH A 378 1555 1555 2.79 LINK CA CA A 301 O HOH A 408 1555 1555 2.88 SITE 1 AC1 7 HIS A 13 ASP A 16 ASP A 129 THR A 130 SITE 2 AC1 7 HOH A 308 HOH A 378 HOH A 408 CRYST1 105.280 105.280 105.280 90.00 90.00 90.00 P 43 3 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009498 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009498 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009498 0.00000