data_1JC9 # _entry.id 1JC9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1JC9 RCSB RCSB013614 WWPDB D_1000013614 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1TL2 ;Tachylectin-2: spcific GlcNAc/GalNAc-binding lectin involved in the innate immunity host defense of the Japanese horseshoe crab Tachypleus tridentatus ; unspecified PDB 1AOC 'Coagulogen, the clotting protein from the Japanese horseshoe crab Tachypleus tridentatus' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1JC9 _pdbx_database_status.recvd_initial_deposition_date 2001-06-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kairies, N.' 1 'Beisel, H.-G.' 2 'Fuentes-Prior, P.' 3 'Tsuda, R.' 4 'Muta, T.' 5 'Iwanaga, S.' 6 'Bode, W.' 7 'Huber, R.' 8 'Kawabata, S.' 9 # _citation.id primary _citation.title ;The 2.0-A crystal structure of tachylectin 5A provides evidence for the common origin of the innate immunity and the blood coagulation systems. ; _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 98 _citation.page_first 13519 _citation.page_last 13524 _citation.year 2001 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11707569 _citation.pdbx_database_id_DOI 10.1073/pnas.201523798 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kairies, N.' 1 ? primary 'Beisel, H.G.' 2 ? primary 'Fuentes-Prior, P.' 3 ? primary 'Tsuda, R.' 4 ? primary 'Muta, T.' 5 ? primary 'Iwanaga, S.' 6 ? primary 'Bode, W.' 7 ? primary 'Huber, R.' 8 ? primary 'Kawabata, S.' 9 ? # _cell.entry_id 1JC9 _cell.length_a 108.934 _cell.length_b 108.934 _cell.length_c 64.059 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JC9 _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat techylectin-5A 31223.488 1 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 water nat water 18.015 179 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QNKELCDVTSSTGLLDSIKVMASHVKEQLKDKGTSEVAQPIVSPDPTDCADILLNGYRSSGGYRIWPKSWMTVGTLNVYC DMETDGGGWTVIQRRGNYGNPSDYFYKPWKNYKLGFGNIEKDFWLGNDRIFALTNQRNYMIRFDLKDKENDTRYAIYQDF WIENEDYLYCLHIGNYSGDAGNSFGRHNGHNFSTIDKDHDTHETHCAQTYKGGWWYDRCHESNLNGLYLNGEHNSYADGI EWRAWKGYHYSLPQVEMKIRPVEFNIIGN ; _entity_poly.pdbx_seq_one_letter_code_can ;QNKELCDVTSSTGLLDSIKVMASHVKEQLKDKGTSEVAQPIVSPDPTDCADILLNGYRSSGGYRIWPKSWMTVGTLNVYC DMETDGGGWTVIQRRGNYGNPSDYFYKPWKNYKLGFGNIEKDFWLGNDRIFALTNQRNYMIRFDLKDKENDTRYAIYQDF WIENEDYLYCLHIGNYSGDAGNSFGRHNGHNFSTIDKDHDTHETHCAQTYKGGWWYDRCHESNLNGLYLNGEHNSYADGI EWRAWKGYHYSLPQVEMKIRPVEFNIIGN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ASN n 1 3 LYS n 1 4 GLU n 1 5 LEU n 1 6 CYS n 1 7 ASP n 1 8 VAL n 1 9 THR n 1 10 SER n 1 11 SER n 1 12 THR n 1 13 GLY n 1 14 LEU n 1 15 LEU n 1 16 ASP n 1 17 SER n 1 18 ILE n 1 19 LYS n 1 20 VAL n 1 21 MET n 1 22 ALA n 1 23 SER n 1 24 HIS n 1 25 VAL n 1 26 LYS n 1 27 GLU n 1 28 GLN n 1 29 LEU n 1 30 LYS n 1 31 ASP n 1 32 LYS n 1 33 GLY n 1 34 THR n 1 35 SER n 1 36 GLU n 1 37 VAL n 1 38 ALA n 1 39 GLN n 1 40 PRO n 1 41 ILE n 1 42 VAL n 1 43 SER n 1 44 PRO n 1 45 ASP n 1 46 PRO n 1 47 THR n 1 48 ASP n 1 49 CYS n 1 50 ALA n 1 51 ASP n 1 52 ILE n 1 53 LEU n 1 54 LEU n 1 55 ASN n 1 56 GLY n 1 57 TYR n 1 58 ARG n 1 59 SER n 1 60 SER n 1 61 GLY n 1 62 GLY n 1 63 TYR n 1 64 ARG n 1 65 ILE n 1 66 TRP n 1 67 PRO n 1 68 LYS n 1 69 SER n 1 70 TRP n 1 71 MET n 1 72 THR n 1 73 VAL n 1 74 GLY n 1 75 THR n 1 76 LEU n 1 77 ASN n 1 78 VAL n 1 79 TYR n 1 80 CYS n 1 81 ASP n 1 82 MET n 1 83 GLU n 1 84 THR n 1 85 ASP n 1 86 GLY n 1 87 GLY n 1 88 GLY n 1 89 TRP n 1 90 THR n 1 91 VAL n 1 92 ILE n 1 93 GLN n 1 94 ARG n 1 95 ARG n 1 96 GLY n 1 97 ASN n 1 98 TYR n 1 99 GLY n 1 100 ASN n 1 101 PRO n 1 102 SER n 1 103 ASP n 1 104 TYR n 1 105 PHE n 1 106 TYR n 1 107 LYS n 1 108 PRO n 1 109 TRP n 1 110 LYS n 1 111 ASN n 1 112 TYR n 1 113 LYS n 1 114 LEU n 1 115 GLY n 1 116 PHE n 1 117 GLY n 1 118 ASN n 1 119 ILE n 1 120 GLU n 1 121 LYS n 1 122 ASP n 1 123 PHE n 1 124 TRP n 1 125 LEU n 1 126 GLY n 1 127 ASN n 1 128 ASP n 1 129 ARG n 1 130 ILE n 1 131 PHE n 1 132 ALA n 1 133 LEU n 1 134 THR n 1 135 ASN n 1 136 GLN n 1 137 ARG n 1 138 ASN n 1 139 TYR n 1 140 MET n 1 141 ILE n 1 142 ARG n 1 143 PHE n 1 144 ASP n 1 145 LEU n 1 146 LYS n 1 147 ASP n 1 148 LYS n 1 149 GLU n 1 150 ASN n 1 151 ASP n 1 152 THR n 1 153 ARG n 1 154 TYR n 1 155 ALA n 1 156 ILE n 1 157 TYR n 1 158 GLN n 1 159 ASP n 1 160 PHE n 1 161 TRP n 1 162 ILE n 1 163 GLU n 1 164 ASN n 1 165 GLU n 1 166 ASP n 1 167 TYR n 1 168 LEU n 1 169 TYR n 1 170 CYS n 1 171 LEU n 1 172 HIS n 1 173 ILE n 1 174 GLY n 1 175 ASN n 1 176 TYR n 1 177 SER n 1 178 GLY n 1 179 ASP n 1 180 ALA n 1 181 GLY n 1 182 ASN n 1 183 SER n 1 184 PHE n 1 185 GLY n 1 186 ARG n 1 187 HIS n 1 188 ASN n 1 189 GLY n 1 190 HIS n 1 191 ASN n 1 192 PHE n 1 193 SER n 1 194 THR n 1 195 ILE n 1 196 ASP n 1 197 LYS n 1 198 ASP n 1 199 HIS n 1 200 ASP n 1 201 THR n 1 202 HIS n 1 203 GLU n 1 204 THR n 1 205 HIS n 1 206 CYS n 1 207 ALA n 1 208 GLN n 1 209 THR n 1 210 TYR n 1 211 LYS n 1 212 GLY n 1 213 GLY n 1 214 TRP n 1 215 TRP n 1 216 TYR n 1 217 ASP n 1 218 ARG n 1 219 CYS n 1 220 HIS n 1 221 GLU n 1 222 SER n 1 223 ASN n 1 224 LEU n 1 225 ASN n 1 226 GLY n 1 227 LEU n 1 228 TYR n 1 229 LEU n 1 230 ASN n 1 231 GLY n 1 232 GLU n 1 233 HIS n 1 234 ASN n 1 235 SER n 1 236 TYR n 1 237 ALA n 1 238 ASP n 1 239 GLY n 1 240 ILE n 1 241 GLU n 1 242 TRP n 1 243 ARG n 1 244 ALA n 1 245 TRP n 1 246 LYS n 1 247 GLY n 1 248 TYR n 1 249 HIS n 1 250 TYR n 1 251 SER n 1 252 LEU n 1 253 PRO n 1 254 GLN n 1 255 VAL n 1 256 GLU n 1 257 MET n 1 258 LYS n 1 259 ILE n 1 260 ARG n 1 261 PRO n 1 262 VAL n 1 263 GLU n 1 264 PHE n 1 265 ASN n 1 266 ILE n 1 267 ILE n 1 268 GLY n 1 269 ASN n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Tachypleus tridentatus' _entity_src_nat.pdbx_ncbi_taxonomy_id 6853 _entity_src_nat.genus Tachypleus _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9U8W8_TACTR _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QNKELCDVTSSTGLLDSIKVMASHVKEQLKDKGTSEVAQPIVSPDPTDCADILLNGYRSSGGYRIWPKSWMTVGTLNVYC DMETDGGGWTVIQRRGNYGNPSDYFYKPWKNYKLGFGNIEKDFWLGNDRIFALTNQRNYMIRFDLKDKENDTRYAIYQDF WIENEDYLYCLHIGNYSGDAGNSFGRHNGHNFSTIDKDHDTHETHCAQTYKGGWWYDRCHESNLNGLYLNGEHNSYADGI EWRAWKGYHYSLPQVEMKIRPVEFNIIGN ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_accession Q9U8W8 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1JC9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 269 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9U8W8 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 292 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 269 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1JC9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.04 _exptl_crystal.density_percent_sol 59.57 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PEG 8000, HEPES, Ethylene glycol, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 289.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 289.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2000-08-21 _diffrn_detector.details MIRROR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1JC9 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 15.25 _reflns.d_resolution_high 2.01 _reflns.number_obs 48257 _reflns.number_all 49191 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs 0.107 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 4.3 _reflns.B_iso_Wilson_estimate 25.240 _reflns.pdbx_redundancy 6.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.01 _reflns_shell.d_res_low 2.13 _reflns_shell.percent_possible_all 94.6 _reflns_shell.Rmerge_I_obs 0.344 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 5.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1JC9 _refine.ls_number_reflns_obs 48257 _refine.ls_number_reflns_all 48257 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 15.25 _refine.ls_d_res_high 2.01 _refine.ls_percent_reflns_obs 98.1 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.183 _refine.ls_R_factor_R_free 0.198 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 2412 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 27.95 _refine.aniso_B[1][1] 1.35 _refine.aniso_B[2][2] 1.35 _refine.aniso_B[3][3] -2.70 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details '44 residues N-terminal and 5 residues C-terminal could not be resolved due to badly defined electron density.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1JC9 _refine_analyze.Luzzati_coordinate_error_obs 0.22 _refine_analyze.Luzzati_sigma_a_obs 6.29 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.24 _refine_analyze.Luzzati_sigma_a_free 0.29 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1839 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 16 _refine_hist.number_atoms_solvent 179 _refine_hist.number_atoms_total 2034 _refine_hist.d_res_high 2.01 _refine_hist.d_res_low 15.25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.3 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.70 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.41 ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.01 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.01 _refine_ls_shell.d_res_low 2.13 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.27 _refine_ls_shell.percent_reflns_obs 90.8 _refine_ls_shell.R_factor_R_free 0.291 _refine_ls_shell.R_factor_R_free_error 0.017 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 423 _refine_ls_shell.number_reflns_obs 8473 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1JC9 _struct.title 'TACHYLECTIN 5A FROM TACHYPLEUS TRIDENTATUS (JAPANESE HORSESHOE CRAB)' _struct.pdbx_descriptor 'TACHYLECTIN 5A' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1JC9 _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text 'lectin, fibrinogen related, SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 48 ? ASN A 55 ? ASP A 48 ASN A 55 1 ? 8 HELX_P HELX_P2 2 SER A 69 ? GLY A 74 ? SER A 69 GLY A 74 1 ? 6 HELX_P HELX_P3 3 GLU A 83 ? GLY A 87 ? GLU A 83 GLY A 87 5 ? 5 HELX_P HELX_P4 4 PRO A 108 ? GLY A 115 ? PRO A 108 GLY A 115 1 ? 8 HELX_P HELX_P5 5 GLY A 126 ? ARG A 137 ? GLY A 126 ARG A 137 1 ? 12 HELX_P HELX_P6 6 ASN A 164 ? LEU A 168 ? ASN A 164 LEU A 168 5 ? 5 HELX_P HELX_P7 7 PHE A 184 ? ASN A 188 ? PHE A 184 ASN A 188 5 ? 5 HELX_P HELX_P8 8 HIS A 205 ? LYS A 211 ? HIS A 205 LYS A 211 1 ? 7 HELX_P HELX_P9 9 TRP A 242 ? GLY A 247 ? TRP A 242 GLY A 247 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 49 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 49 A CYS 80 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf2 disulf ? ? A CYS 206 SG ? ? ? 1_555 A CYS 219 SG ? ? A CYS 206 A CYS 219 1_555 ? ? ? ? ? ? ? 2.027 ? ? metalc1 metalc ? ? A ASP 198 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 198 A CA 301 1_555 ? ? ? ? ? ? ? 2.303 ? ? metalc2 metalc ? ? A ASP 198 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 198 A CA 301 1_555 ? ? ? ? ? ? ? 2.568 ? ? metalc3 metalc ? ? A ASP 200 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 200 A CA 301 1_555 ? ? ? ? ? ? ? 3.304 ? ? metalc4 metalc ? ? A ASP 200 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 200 A CA 301 1_555 ? ? ? ? ? ? ? 2.366 ? ? metalc5 metalc ? ? A HIS 202 O ? ? ? 1_555 C CA . CA ? ? A HIS 202 A CA 301 1_555 ? ? ? ? ? ? ? 2.481 ? ? metalc6 metalc ? ? A THR 204 O ? ? ? 1_555 C CA . CA ? ? A THR 204 A CA 301 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc7 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 301 A HOH 341 1_555 ? ? ? ? ? ? ? 2.598 ? ? metalc8 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 301 A HOH 362 1_555 ? ? ? ? ? ? ? 2.300 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 218 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 218 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 CYS _struct_mon_prot_cis.pdbx_label_seq_id_2 219 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 CYS _struct_mon_prot_cis.pdbx_auth_seq_id_2 219 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.76 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 13 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? anti-parallel A 12 13 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 61 ? ILE A 65 ? GLY A 61 ILE A 65 A 2 LEU A 76 ? ASP A 81 ? LEU A 76 ASP A 81 A 3 TRP A 89 ? ARG A 95 ? TRP A 89 ARG A 95 A 4 PHE A 123 ? TRP A 124 ? PHE A 123 TRP A 124 A 5 PHE A 116 ? GLY A 117 ? PHE A 116 GLY A 117 A 6 PHE A 123 ? TRP A 124 ? PHE A 123 TRP A 124 A 7 TRP A 89 ? ARG A 95 ? TRP A 89 ARG A 95 A 8 GLN A 254 ? PRO A 261 ? GLN A 254 PRO A 261 A 9 TYR A 139 ? LYS A 146 ? TYR A 139 LYS A 146 A 10 THR A 152 ? ILE A 162 ? THR A 152 ILE A 162 A 11 LEU A 171 ? HIS A 172 ? LEU A 171 HIS A 172 A 12 THR A 152 ? ILE A 162 ? THR A 152 ILE A 162 A 13 TYR A 176 ? GLY A 178 ? TYR A 176 GLY A 178 B 1 GLY A 231 ? GLU A 232 ? GLY A 231 GLU A 232 B 2 TYR A 250 ? SER A 251 ? TYR A 250 SER A 251 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 65 ? N ILE A 65 O LEU A 76 ? O LEU A 76 A 2 3 N ASP A 81 ? N ASP A 81 O TRP A 89 ? O TRP A 89 A 3 4 N ARG A 94 ? N ARG A 94 O PHE A 123 ? O PHE A 123 A 4 5 N TRP A 124 ? N TRP A 124 O PHE A 116 ? O PHE A 116 A 5 6 O PHE A 116 ? O PHE A 116 N TRP A 124 ? N TRP A 124 A 6 7 O PHE A 123 ? O PHE A 123 N ARG A 94 ? N ARG A 94 A 7 8 N ARG A 95 ? N ARG A 95 O VAL A 255 ? O VAL A 255 A 8 9 O ARG A 260 ? O ARG A 260 N MET A 140 ? N MET A 140 A 9 10 N LEU A 145 ? N LEU A 145 O ARG A 153 ? O ARG A 153 A 10 11 O TRP A 161 ? O TRP A 161 N HIS A 172 ? N HIS A 172 A 11 12 O HIS A 172 ? O HIS A 172 N TRP A 161 ? N TRP A 161 A 12 13 N ILE A 156 ? N ILE A 156 O SER A 177 ? O SER A 177 B 1 2 O GLY A 231 ? O GLY A 231 N SER A 251 ? N SER A 251 # _database_PDB_matrix.entry_id 1JC9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1JC9 _atom_sites.fract_transf_matrix[1][1] 0.009180 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009180 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015611 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 ? ? ? A . n A 1 2 ASN 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 GLU 4 4 ? ? ? A . n A 1 5 LEU 5 5 ? ? ? A . n A 1 6 CYS 6 6 ? ? ? A . n A 1 7 ASP 7 7 ? ? ? A . n A 1 8 VAL 8 8 ? ? ? A . n A 1 9 THR 9 9 ? ? ? A . n A 1 10 SER 10 10 ? ? ? A . n A 1 11 SER 11 11 ? ? ? A . n A 1 12 THR 12 12 ? ? ? A . n A 1 13 GLY 13 13 ? ? ? A . n A 1 14 LEU 14 14 ? ? ? A . n A 1 15 LEU 15 15 ? ? ? A . n A 1 16 ASP 16 16 ? ? ? A . n A 1 17 SER 17 17 ? ? ? A . n A 1 18 ILE 18 18 ? ? ? A . n A 1 19 LYS 19 19 ? ? ? A . n A 1 20 VAL 20 20 ? ? ? A . n A 1 21 MET 21 21 ? ? ? A . n A 1 22 ALA 22 22 ? ? ? A . n A 1 23 SER 23 23 ? ? ? A . n A 1 24 HIS 24 24 ? ? ? A . n A 1 25 VAL 25 25 ? ? ? A . n A 1 26 LYS 26 26 ? ? ? A . n A 1 27 GLU 27 27 ? ? ? A . n A 1 28 GLN 28 28 ? ? ? A . n A 1 29 LEU 29 29 ? ? ? A . n A 1 30 LYS 30 30 ? ? ? A . n A 1 31 ASP 31 31 ? ? ? A . n A 1 32 LYS 32 32 ? ? ? A . n A 1 33 GLY 33 33 ? ? ? A . n A 1 34 THR 34 34 ? ? ? A . n A 1 35 SER 35 35 ? ? ? A . n A 1 36 GLU 36 36 ? ? ? A . n A 1 37 VAL 37 37 ? ? ? A . n A 1 38 ALA 38 38 ? ? ? A . n A 1 39 GLN 39 39 ? ? ? A . n A 1 40 PRO 40 40 ? ? ? A . n A 1 41 ILE 41 41 ? ? ? A . n A 1 42 VAL 42 42 ? ? ? A . n A 1 43 SER 43 43 ? ? ? A . n A 1 44 PRO 44 44 ? ? ? A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 CYS 49 49 49 CYS CYS A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ASN 55 55 55 ASN ASN A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 TRP 66 66 66 TRP TRP A . n A 1 67 PRO 67 67 67 PRO PRO A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 TRP 70 70 70 TRP TRP A . n A 1 71 MET 71 71 71 MET MET A . n A 1 72 THR 72 72 72 THR THR A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 MET 82 82 82 MET MET A . n A 1 83 GLU 83 83 83 GLU GLU A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 GLY 88 88 88 GLY GLY A . n A 1 89 TRP 89 89 89 TRP TRP A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 VAL 91 91 91 VAL VAL A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ASN 97 97 97 ASN ASN A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 ASN 100 100 100 ASN ASN A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 TYR 104 104 104 TYR TYR A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 TYR 106 106 106 TYR TYR A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 TRP 109 109 109 TRP TRP A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 TYR 112 112 112 TYR TYR A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 LYS 121 121 121 LYS LYS A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 PHE 123 123 123 PHE PHE A . n A 1 124 TRP 124 124 124 TRP TRP A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 ASN 127 127 127 ASN ASN A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 ARG 129 129 129 ARG ARG A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 PHE 131 131 131 PHE PHE A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 THR 134 134 134 THR THR A . n A 1 135 ASN 135 135 135 ASN ASN A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ASN 138 138 138 ASN ASN A . n A 1 139 TYR 139 139 139 TYR TYR A . n A 1 140 MET 140 140 140 MET MET A . n A 1 141 ILE 141 141 141 ILE ILE A . n A 1 142 ARG 142 142 142 ARG ARG A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 LYS 146 146 146 LYS LYS A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 GLU 149 149 149 GLU GLU A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 ARG 153 153 153 ARG ARG A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 TYR 157 157 157 TYR TYR A . n A 1 158 GLN 158 158 158 GLN GLN A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 PHE 160 160 160 PHE PHE A . n A 1 161 TRP 161 161 161 TRP TRP A . n A 1 162 ILE 162 162 162 ILE ILE A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 TYR 169 169 169 TYR TYR A . n A 1 170 CYS 170 170 170 CYS CYS A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 HIS 172 172 172 HIS HIS A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 GLY 174 174 174 GLY GLY A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 TYR 176 176 176 TYR TYR A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 ASN 182 182 182 ASN ASN A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 PHE 184 184 184 PHE PHE A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 HIS 187 187 187 HIS HIS A . n A 1 188 ASN 188 188 188 ASN ASN A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 HIS 190 190 190 HIS HIS A . n A 1 191 ASN 191 191 191 ASN ASN A . n A 1 192 PHE 192 192 192 PHE PHE A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 THR 194 194 194 THR THR A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 ASP 196 196 196 ASP ASP A . n A 1 197 LYS 197 197 197 LYS LYS A . n A 1 198 ASP 198 198 198 ASP ASP A . n A 1 199 HIS 199 199 199 HIS HIS A . n A 1 200 ASP 200 200 200 ASP ASP A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 HIS 202 202 202 HIS HIS A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 THR 204 204 204 THR THR A . n A 1 205 HIS 205 205 205 HIS HIS A . n A 1 206 CYS 206 206 206 CYS CYS A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 GLN 208 208 208 GLN GLN A . n A 1 209 THR 209 209 209 THR THR A . n A 1 210 TYR 210 210 210 TYR TYR A . n A 1 211 LYS 211 211 211 LYS LYS A . n A 1 212 GLY 212 212 212 GLY GLY A . n A 1 213 GLY 213 213 213 GLY GLY A . n A 1 214 TRP 214 214 214 TRP TRP A . n A 1 215 TRP 215 215 215 TRP TRP A . n A 1 216 TYR 216 216 216 TYR TYR A . n A 1 217 ASP 217 217 217 ASP ASP A . n A 1 218 ARG 218 218 218 ARG ARG A . n A 1 219 CYS 219 219 219 CYS CYS A . n A 1 220 HIS 220 220 220 HIS HIS A . n A 1 221 GLU 221 221 221 GLU GLU A . n A 1 222 SER 222 222 222 SER SER A . n A 1 223 ASN 223 223 223 ASN ASN A . n A 1 224 LEU 224 224 224 LEU LEU A . n A 1 225 ASN 225 225 225 ASN ASN A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 LEU 227 227 227 LEU LEU A . n A 1 228 TYR 228 228 228 TYR TYR A . n A 1 229 LEU 229 229 229 LEU LEU A . n A 1 230 ASN 230 230 230 ASN ASN A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 HIS 233 233 233 HIS HIS A . n A 1 234 ASN 234 234 234 ASN ASN A . n A 1 235 SER 235 235 235 SER SER A . n A 1 236 TYR 236 236 236 TYR TYR A . n A 1 237 ALA 237 237 237 ALA ALA A . n A 1 238 ASP 238 238 238 ASP ASP A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 ILE 240 240 240 ILE ILE A . n A 1 241 GLU 241 241 241 GLU GLU A . n A 1 242 TRP 242 242 242 TRP TRP A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 ALA 244 244 244 ALA ALA A . n A 1 245 TRP 245 245 245 TRP TRP A . n A 1 246 LYS 246 246 246 LYS LYS A . n A 1 247 GLY 247 247 247 GLY GLY A . n A 1 248 TYR 248 248 248 TYR TYR A . n A 1 249 HIS 249 249 249 HIS HIS A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 SER 251 251 251 SER SER A . n A 1 252 LEU 252 252 252 LEU LEU A . n A 1 253 PRO 253 253 253 PRO PRO A . n A 1 254 GLN 254 254 254 GLN GLN A . n A 1 255 VAL 255 255 255 VAL VAL A . n A 1 256 GLU 256 256 256 GLU GLU A . n A 1 257 MET 257 257 257 MET MET A . n A 1 258 LYS 258 258 258 LYS LYS A . n A 1 259 ILE 259 259 259 ILE ILE A . n A 1 260 ARG 260 260 260 ARG ARG A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 VAL 262 262 262 VAL VAL A . n A 1 263 GLU 263 263 263 GLU GLU A . n A 1 264 PHE 264 264 264 PHE PHE A . n A 1 265 ASN 265 265 ? ? ? A . n A 1 266 ILE 266 266 ? ? ? A . n A 1 267 ILE 267 267 ? ? ? A . n A 1 268 GLY 268 268 ? ? ? A . n A 1 269 ASN 269 269 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 270 180 NAG NAG A . C 3 CA 1 301 1 CA CA A . D 4 HOH 1 302 1 HOH HOH A . D 4 HOH 2 303 2 HOH HOH A . D 4 HOH 3 304 3 HOH HOH A . D 4 HOH 4 305 4 HOH HOH A . D 4 HOH 5 306 5 HOH HOH A . D 4 HOH 6 307 6 HOH HOH A . D 4 HOH 7 308 7 HOH HOH A . D 4 HOH 8 309 8 HOH HOH A . D 4 HOH 9 310 9 HOH HOH A . D 4 HOH 10 311 10 HOH HOH A . D 4 HOH 11 312 11 HOH HOH A . D 4 HOH 12 313 12 HOH HOH A . D 4 HOH 13 314 13 HOH HOH A . D 4 HOH 14 315 14 HOH HOH A . D 4 HOH 15 316 15 HOH HOH A . D 4 HOH 16 317 16 HOH HOH A . D 4 HOH 17 318 17 HOH HOH A . D 4 HOH 18 319 18 HOH HOH A . D 4 HOH 19 320 19 HOH HOH A . D 4 HOH 20 321 20 HOH HOH A . D 4 HOH 21 322 21 HOH HOH A . D 4 HOH 22 323 22 HOH HOH A . D 4 HOH 23 324 23 HOH HOH A . D 4 HOH 24 325 24 HOH HOH A . D 4 HOH 25 326 25 HOH HOH A . D 4 HOH 26 327 26 HOH HOH A . D 4 HOH 27 328 27 HOH HOH A . D 4 HOH 28 329 28 HOH HOH A . D 4 HOH 29 330 29 HOH HOH A . D 4 HOH 30 331 30 HOH HOH A . D 4 HOH 31 332 31 HOH HOH A . D 4 HOH 32 333 32 HOH HOH A . D 4 HOH 33 334 33 HOH HOH A . D 4 HOH 34 335 34 HOH HOH A . D 4 HOH 35 336 35 HOH HOH A . D 4 HOH 36 337 36 HOH HOH A . D 4 HOH 37 338 37 HOH HOH A . D 4 HOH 38 339 38 HOH HOH A . D 4 HOH 39 340 39 HOH HOH A . D 4 HOH 40 341 40 HOH HOH A . D 4 HOH 41 342 41 HOH HOH A . D 4 HOH 42 343 42 HOH HOH A . D 4 HOH 43 344 43 HOH HOH A . D 4 HOH 44 345 44 HOH HOH A . D 4 HOH 45 346 45 HOH HOH A . D 4 HOH 46 347 46 HOH HOH A . D 4 HOH 47 348 47 HOH HOH A . D 4 HOH 48 349 48 HOH HOH A . D 4 HOH 49 350 49 HOH HOH A . D 4 HOH 50 351 50 HOH HOH A . D 4 HOH 51 352 51 HOH HOH A . D 4 HOH 52 353 52 HOH HOH A . D 4 HOH 53 354 53 HOH HOH A . D 4 HOH 54 355 54 HOH HOH A . D 4 HOH 55 356 55 HOH HOH A . D 4 HOH 56 357 56 HOH HOH A . D 4 HOH 57 358 57 HOH HOH A . D 4 HOH 58 359 58 HOH HOH A . D 4 HOH 59 360 59 HOH HOH A . D 4 HOH 60 361 60 HOH HOH A . D 4 HOH 61 362 61 HOH HOH A . D 4 HOH 62 363 62 HOH HOH A . D 4 HOH 63 364 63 HOH HOH A . D 4 HOH 64 365 64 HOH HOH A . D 4 HOH 65 366 65 HOH HOH A . D 4 HOH 66 367 66 HOH HOH A . D 4 HOH 67 368 67 HOH HOH A . D 4 HOH 68 369 68 HOH HOH A . D 4 HOH 69 370 69 HOH HOH A . D 4 HOH 70 371 70 HOH HOH A . D 4 HOH 71 372 71 HOH HOH A . D 4 HOH 72 373 72 HOH HOH A . D 4 HOH 73 374 73 HOH HOH A . D 4 HOH 74 375 74 HOH HOH A . D 4 HOH 75 376 75 HOH HOH A . D 4 HOH 76 377 76 HOH HOH A . D 4 HOH 77 378 77 HOH HOH A . D 4 HOH 78 379 78 HOH HOH A . D 4 HOH 79 380 79 HOH HOH A . D 4 HOH 80 381 80 HOH HOH A . D 4 HOH 81 382 81 HOH HOH A . D 4 HOH 82 383 82 HOH HOH A . D 4 HOH 83 384 83 HOH HOH A . D 4 HOH 84 385 84 HOH HOH A . D 4 HOH 85 386 85 HOH HOH A . D 4 HOH 86 387 86 HOH HOH A . D 4 HOH 87 388 87 HOH HOH A . D 4 HOH 88 389 88 HOH HOH A . D 4 HOH 89 390 89 HOH HOH A . D 4 HOH 90 391 90 HOH HOH A . D 4 HOH 91 392 91 HOH HOH A . D 4 HOH 92 393 92 HOH HOH A . D 4 HOH 93 394 93 HOH HOH A . D 4 HOH 94 395 94 HOH HOH A . D 4 HOH 95 396 95 HOH HOH A . D 4 HOH 96 397 96 HOH HOH A . D 4 HOH 97 398 97 HOH HOH A . D 4 HOH 98 399 98 HOH HOH A . D 4 HOH 99 400 99 HOH HOH A . D 4 HOH 100 401 100 HOH HOH A . D 4 HOH 101 402 101 HOH HOH A . D 4 HOH 102 403 102 HOH HOH A . D 4 HOH 103 404 103 HOH HOH A . D 4 HOH 104 405 104 HOH HOH A . D 4 HOH 105 406 105 HOH HOH A . D 4 HOH 106 407 106 HOH HOH A . D 4 HOH 107 408 107 HOH HOH A . D 4 HOH 108 409 108 HOH HOH A . D 4 HOH 109 410 109 HOH HOH A . D 4 HOH 110 411 110 HOH HOH A . D 4 HOH 111 412 111 HOH HOH A . D 4 HOH 112 413 112 HOH HOH A . D 4 HOH 113 414 113 HOH HOH A . D 4 HOH 114 415 114 HOH HOH A . D 4 HOH 115 416 115 HOH HOH A . D 4 HOH 116 417 116 HOH HOH A . D 4 HOH 117 418 117 HOH HOH A . D 4 HOH 118 419 118 HOH HOH A . D 4 HOH 119 420 119 HOH HOH A . D 4 HOH 120 421 120 HOH HOH A . D 4 HOH 121 422 121 HOH HOH A . D 4 HOH 122 423 122 HOH HOH A . D 4 HOH 123 424 123 HOH HOH A . D 4 HOH 124 425 124 HOH HOH A . D 4 HOH 125 426 125 HOH HOH A . D 4 HOH 126 427 126 HOH HOH A . D 4 HOH 127 428 127 HOH HOH A . D 4 HOH 128 429 128 HOH HOH A . D 4 HOH 129 430 129 HOH HOH A . D 4 HOH 130 431 130 HOH HOH A . D 4 HOH 131 432 131 HOH HOH A . D 4 HOH 132 433 132 HOH HOH A . D 4 HOH 133 434 133 HOH HOH A . D 4 HOH 134 435 134 HOH HOH A . D 4 HOH 135 436 135 HOH HOH A . D 4 HOH 136 437 136 HOH HOH A . D 4 HOH 137 438 137 HOH HOH A . D 4 HOH 138 439 138 HOH HOH A . D 4 HOH 139 440 139 HOH HOH A . D 4 HOH 140 441 140 HOH HOH A . D 4 HOH 141 442 141 HOH HOH A . D 4 HOH 142 443 142 HOH HOH A . D 4 HOH 143 444 143 HOH HOH A . D 4 HOH 144 445 144 HOH HOH A . D 4 HOH 145 446 145 HOH HOH A . D 4 HOH 146 447 146 HOH HOH A . D 4 HOH 147 448 147 HOH HOH A . D 4 HOH 148 449 148 HOH HOH A . D 4 HOH 149 450 149 HOH HOH A . D 4 HOH 150 451 150 HOH HOH A . D 4 HOH 151 452 151 HOH HOH A . D 4 HOH 152 453 152 HOH HOH A . D 4 HOH 153 454 153 HOH HOH A . D 4 HOH 154 455 154 HOH HOH A . D 4 HOH 155 456 155 HOH HOH A . D 4 HOH 156 457 156 HOH HOH A . D 4 HOH 157 458 157 HOH HOH A . D 4 HOH 158 459 158 HOH HOH A . D 4 HOH 159 460 159 HOH HOH A . D 4 HOH 160 461 160 HOH HOH A . D 4 HOH 161 462 161 HOH HOH A . D 4 HOH 162 463 162 HOH HOH A . D 4 HOH 163 464 163 HOH HOH A . D 4 HOH 164 465 164 HOH HOH A . D 4 HOH 165 466 165 HOH HOH A . D 4 HOH 166 467 166 HOH HOH A . D 4 HOH 167 468 167 HOH HOH A . D 4 HOH 168 469 168 HOH HOH A . D 4 HOH 169 470 169 HOH HOH A . D 4 HOH 170 471 170 HOH HOH A . D 4 HOH 171 472 171 HOH HOH A . D 4 HOH 172 473 172 HOH HOH A . D 4 HOH 173 474 173 HOH HOH A . D 4 HOH 174 475 174 HOH HOH A . D 4 HOH 175 476 175 HOH HOH A . D 4 HOH 176 477 176 HOH HOH A . D 4 HOH 177 478 177 HOH HOH A . D 4 HOH 178 479 178 HOH HOH A . D 4 HOH 179 480 179 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 OD1 ? A ASP 198 ? A ASP 198 ? 1_555 53.1 ? 2 OD2 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 81.1 ? 3 OD1 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 63.8 ? 4 OD2 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 120.0 ? 5 OD1 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 80.7 ? 6 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 41.7 ? 7 OD2 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? A HIS 202 ? A HIS 202 ? 1_555 156.2 ? 8 OD1 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? A HIS 202 ? A HIS 202 ? 1_555 149.3 ? 9 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? A HIS 202 ? A HIS 202 ? 1_555 114.2 ? 10 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? A HIS 202 ? A HIS 202 ? 1_555 80.7 ? 11 OD2 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? A THR 204 ? A THR 204 ? 1_555 82.7 ? 12 OD1 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? A THR 204 ? A THR 204 ? 1_555 123.4 ? 13 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? A THR 204 ? A THR 204 ? 1_555 77.5 ? 14 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? A THR 204 ? A THR 204 ? 1_555 97.2 ? 15 O ? A HIS 202 ? A HIS 202 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? A THR 204 ? A THR 204 ? 1_555 83.2 ? 16 OD2 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 341 ? 1_555 81.4 ? 17 OD1 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 341 ? 1_555 111.0 ? 18 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 341 ? 1_555 160.6 ? 19 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 341 ? 1_555 157.6 ? 20 O ? A HIS 202 ? A HIS 202 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 341 ? 1_555 80.1 ? 21 O ? A THR 204 ? A THR 204 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 341 ? 1_555 92.0 ? 22 OD2 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 362 ? 1_555 114.2 ? 23 OD1 ? A ASP 198 ? A ASP 198 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 362 ? 1_555 74.6 ? 24 OD1 ? A ASP 200 ? A ASP 200 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 362 ? 1_555 111.0 ? 25 OD2 ? A ASP 200 ? A ASP 200 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 362 ? 1_555 81.0 ? 26 O ? A HIS 202 ? A HIS 202 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 362 ? 1_555 78.5 ? 27 O ? A THR 204 ? A THR 204 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 362 ? 1_555 161.6 ? 28 O ? D HOH . ? A HOH 341 ? 1_555 CA ? C CA . ? A CA 301 ? 1_555 O ? D HOH . ? A HOH 362 ? 1_555 83.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-11-28 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity 3 4 'Structure model' pdbx_chem_comp_identifier 4 4 'Structure model' pdbx_entity_nonpoly 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.type' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_entity_nonpoly.name' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 SCALA 'data scaling' . ? 2 CCP4 'model building' . ? 3 CNS refinement 1.0 ? 4 CCP4 'data scaling' '(SCALA)' ? 5 CCP4 phasing . ? 6 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ;BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN(S). UNDER PHYSIOLOGICAL CONDITIONS TL5A FORMS HEXAMERIC OR OCTAMERIC ARRANGEMENTS, BUT THE PACKING DOES NOT ALLOW CREATION OF HEXAMERIC OR OCTAMERIC OLIGOMERIZATION. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 85 ? ? 38.12 51.72 2 1 LYS A 121 ? ? -126.04 -134.73 3 1 ARG A 137 ? ? -174.01 -176.72 4 1 ASP A 217 ? ? -111.38 -91.45 5 1 ARG A 218 ? ? -149.58 51.23 6 1 ASN A 223 ? ? -147.03 54.43 7 1 ASN A 230 ? ? 47.70 76.33 8 1 ALA A 237 ? ? 44.28 27.60 9 1 GLU A 263 ? ? -83.08 31.67 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 1 ? A GLN 1 2 1 Y 1 A ASN 2 ? A ASN 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A GLU 4 ? A GLU 4 5 1 Y 1 A LEU 5 ? A LEU 5 6 1 Y 1 A CYS 6 ? A CYS 6 7 1 Y 1 A ASP 7 ? A ASP 7 8 1 Y 1 A VAL 8 ? A VAL 8 9 1 Y 1 A THR 9 ? A THR 9 10 1 Y 1 A SER 10 ? A SER 10 11 1 Y 1 A SER 11 ? A SER 11 12 1 Y 1 A THR 12 ? A THR 12 13 1 Y 1 A GLY 13 ? A GLY 13 14 1 Y 1 A LEU 14 ? A LEU 14 15 1 Y 1 A LEU 15 ? A LEU 15 16 1 Y 1 A ASP 16 ? A ASP 16 17 1 Y 1 A SER 17 ? A SER 17 18 1 Y 1 A ILE 18 ? A ILE 18 19 1 Y 1 A LYS 19 ? A LYS 19 20 1 Y 1 A VAL 20 ? A VAL 20 21 1 Y 1 A MET 21 ? A MET 21 22 1 Y 1 A ALA 22 ? A ALA 22 23 1 Y 1 A SER 23 ? A SER 23 24 1 Y 1 A HIS 24 ? A HIS 24 25 1 Y 1 A VAL 25 ? A VAL 25 26 1 Y 1 A LYS 26 ? A LYS 26 27 1 Y 1 A GLU 27 ? A GLU 27 28 1 Y 1 A GLN 28 ? A GLN 28 29 1 Y 1 A LEU 29 ? A LEU 29 30 1 Y 1 A LYS 30 ? A LYS 30 31 1 Y 1 A ASP 31 ? A ASP 31 32 1 Y 1 A LYS 32 ? A LYS 32 33 1 Y 1 A GLY 33 ? A GLY 33 34 1 Y 1 A THR 34 ? A THR 34 35 1 Y 1 A SER 35 ? A SER 35 36 1 Y 1 A GLU 36 ? A GLU 36 37 1 Y 1 A VAL 37 ? A VAL 37 38 1 Y 1 A ALA 38 ? A ALA 38 39 1 Y 1 A GLN 39 ? A GLN 39 40 1 Y 1 A PRO 40 ? A PRO 40 41 1 Y 1 A ILE 41 ? A ILE 41 42 1 Y 1 A VAL 42 ? A VAL 42 43 1 Y 1 A SER 43 ? A SER 43 44 1 Y 1 A PRO 44 ? A PRO 44 45 1 Y 1 A ASN 265 ? A ASN 265 46 1 Y 1 A ILE 266 ? A ILE 266 47 1 Y 1 A ILE 267 ? A ILE 267 48 1 Y 1 A GLY 268 ? A GLY 268 49 1 Y 1 A ASN 269 ? A ASN 269 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 'CALCIUM ION' CA 4 water HOH #