HEADER RNA 27-JUL-01 1JO7 TITLE SOLUTION STRUCTURE OF INFLUENZA A VIRUS PROMOTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: INFLUENZA A VIRUS PROMOTER RNA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: T7 IN VITRO TRANSCRIPTION KEYWDS RNA PANHANDLE, AAU AC MISMATCH, BENDING, INTERNAL LOOP, UUCG, RNA EXPDTA SOLUTION NMR NUMMDL 32 AUTHOR S.-H.BAE,H.-K.CHEONG,J.-H.LEE,C.CHEONG,M.KAINOSHO,B.-S.CHOI REVDAT 4 23-FEB-22 1JO7 1 REMARK REVDAT 3 24-FEB-09 1JO7 1 VERSN REVDAT 2 01-APR-03 1JO7 1 JRNL REVDAT 1 19-SEP-01 1JO7 0 JRNL AUTH S.H.BAE,H.K.CHEONG,J.H.LEE,C.CHEONG,M.KAINOSHO,B.S.CHOI JRNL TITL STRUCTURAL FEATURES OF AN INFLUENZA VIRUS PROMOTER AND THEIR JRNL TITL 2 IMPLICATIONS FOR VIRAL RNA SYNTHESIS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 98 10602 2001 JRNL REFN ISSN 0027-8424 JRNL PMID 11553808 JRNL DOI 10.1073/PNAS.191268798 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 98, X-PLOR 3.1, CNS 1.0 REMARK 3 AUTHORS : BRUKER INC. (XWINNMR), BRUNGER ET AL. (X-PLOR), REMARK 3 BRUNGER ET AL. (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE REFINED USING REMARK 3 RESIDUAL DIPOLAR COUPLING CONSTRAINTS REMARK 4 REMARK 4 1JO7 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-AUG-01. REMARK 100 THE DEPOSITION ID IS D_1000013997. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 294; 277 REMARK 210 PH : 6.5; 6.5 REMARK 210 IONIC STRENGTH : 10MM SODIUM PHOSPHATE; 10MM REMARK 210 SODIUM PHOSPHATE REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 2MM UNLABELED; 0.4MM 13C/15N REMARK 210 LABELED; 0.4MM 13C/15N LABELED REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ; 400 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY 3.95 REMARK 210 METHOD USED : DISTANCE GEOMETRY & SIMULATED REMARK 210 ANNEALING + SUSCEPTIBILITY REMARK 210 ANISOTROPY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 32 REMARK 210 CONFORMERS, SELECTION CRITERIA : THE SUBMITTED CONFORMER MODELS REMARK 210 ARE THE 32 STRUCTURES WITH REMARK 210 LOWEST ENERGY AND ACCEPTABLE REMARK 210 COVALENT GEOMETRY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING STANDARD 2D AND 3D REMARK 210 TECHNIQUES REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL DBREF 1JO7 A 1 31 PDB 1JO7 1JO7 1 31 SEQRES 1 A 31 A G U A G A A A C A A G G SEQRES 2 A 31 C U U C G G C C U G C U U SEQRES 3 A 31 U U G C U CRYST1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1