HEADER TRANSFERASE 07-SEP-01 1JXI TITLE 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE PHOSPHATE KINASE FROM TITLE 2 SALMONELLA TYPHIMURIUM COMPLEXED WITH 4-AMINO-5-HYDROXYMETHYL-2- TITLE 3 METHYLPYRIMIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOMETHYLPYRIMIDINE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HMP-PHOSPHATE KINASE; COMPND 5 EC: 2.7.4.7; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHIMURIUM; SOURCE 3 ORGANISM_TAXID: 602; SOURCE 4 GENE: THID; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS THID, RIBOKINASE FAMILY, KINASE, PHOSPHORYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.CHENG,E.M.BENNETT,T.P.BEGLEY,S.E.EALICK REVDAT 4 03-APR-24 1JXI 1 REMARK REVDAT 3 07-FEB-24 1JXI 1 REMARK SEQADV REVDAT 2 24-FEB-09 1JXI 1 VERSN REVDAT 1 27-FEB-02 1JXI 0 JRNL AUTH G.CHENG,E.M.BENNETT,T.P.BEGLEY,S.E.EALICK JRNL TITL CRYSTAL STRUCTURE OF JRNL TITL 2 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE PHOSPHATE KINASE JRNL TITL 3 FROM SALMONELLA TYPHIMURIUM AT 2.3 A RESOLUTION. JRNL REF STRUCTURE V. 10 225 2002 JRNL REFN ISSN 0969-2126 JRNL PMID 11839308 JRNL DOI 10.1016/S0969-2126(02)00708-6 REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.64 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 17178 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1692 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3804 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.04300 REMARK 3 B22 (A**2) : -8.04300 REMARK 3 B33 (A**2) : 16.08600 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.270 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.870 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : HMP.PARAM REMARK 3 PARAMETER FILE 4 : WATER.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1JXI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-01. REMARK 100 THE DEPOSITION ID IS D_1000014300. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JUN-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.909 REMARK 200 MONOCHROMATOR : SI CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20166 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MGSO4, MES, PH 7.2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 91.74500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.87500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.87500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.87250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.87500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.87500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 137.61750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.87500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.87500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.87250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.87500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.87500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 137.61750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 91.74500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18990 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 TYR A -6 REMARK 465 HIS A -5 REMARK 465 ILE A -4 REMARK 465 GLN A -3 REMARK 465 GLY A -2 REMARK 465 ARG A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 178 REMARK 465 HIS A 179 REMARK 465 LEU A 180 REMARK 465 GLU A 181 REMARK 465 ASP A 182 REMARK 465 ALA A 183 REMARK 465 GLN A 184 REMARK 465 SER A 185 REMARK 465 PRO A 186 REMARK 465 SER A 199 REMARK 465 ALA A 200 REMARK 465 PRO A 201 REMARK 465 MET B -21 REMARK 465 GLY B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 TYR B -6 REMARK 465 HIS B -5 REMARK 465 ILE B -4 REMARK 465 GLN B -3 REMARK 465 GLY B -2 REMARK 465 ARG B -1 REMARK 465 HIS B 0 REMARK 465 GLY B 178 REMARK 465 HIS B 179 REMARK 465 LEU B 180 REMARK 465 GLU B 181 REMARK 465 ASP B 182 REMARK 465 ALA B 183 REMARK 465 GLN B 184 REMARK 465 SER B 185 REMARK 465 PRO B 186 REMARK 465 SER B 199 REMARK 465 ALA B 200 REMARK 465 PRO B 201 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 SER A 112 OG REMARK 470 ASP A 114 CG OD1 OD2 REMARK 470 ARG A 202 CG CD NE CZ NH1 NH2 REMARK 470 VAL A 203 CG1 CG2 REMARK 470 ASN A 204 CG OD1 ND2 REMARK 470 LYS B 111 CG CD CE NZ REMARK 470 SER B 112 OG REMARK 470 ASP B 114 CG OD1 OD2 REMARK 470 ARG B 202 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 203 CG1 CG2 REMARK 470 ASN B 204 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 18 -166.03 -129.37 REMARK 500 ASP A 70 -37.03 -139.97 REMARK 500 ALA A 82 -68.69 64.91 REMARK 500 LEU A 109 -135.25 -166.41 REMARK 500 ALA A 110 146.11 -173.49 REMARK 500 ASP A 114 119.67 163.27 REMARK 500 PRO A 115 83.56 -63.97 REMARK 500 LEU A 116 35.01 -69.34 REMARK 500 PRO A 131 2.10 -67.43 REMARK 500 GLU A 251 60.31 -118.97 REMARK 500 ALA B 18 -165.32 -128.10 REMARK 500 ASP B 70 -36.65 -140.75 REMARK 500 ALA B 82 -69.14 64.74 REMARK 500 LEU B 109 -134.96 -166.08 REMARK 500 ALA B 110 145.98 -173.72 REMARK 500 ASP B 114 119.48 163.26 REMARK 500 PRO B 115 83.63 -63.73 REMARK 500 LEU B 116 35.13 -69.23 REMARK 500 PRO B 131 1.98 -65.83 REMARK 500 GLU B 251 59.86 -119.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HMH A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HMH B 2002 DBREF 1JXI A 1 266 UNP P55882 THID_SALTY 1 266 DBREF 1JXI B 1 266 UNP P55882 THID_SALTY 1 266 SEQADV 1JXI MET A -21 UNP P55882 EXPRESSION TAG SEQADV 1JXI GLY A -20 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -19 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -18 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -17 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -16 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -15 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -14 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -13 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -12 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -11 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -10 UNP P55882 EXPRESSION TAG SEQADV 1JXI SER A -9 UNP P55882 EXPRESSION TAG SEQADV 1JXI SER A -8 UNP P55882 EXPRESSION TAG SEQADV 1JXI GLY A -7 UNP P55882 EXPRESSION TAG SEQADV 1JXI TYR A -6 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A -5 UNP P55882 EXPRESSION TAG SEQADV 1JXI ILE A -4 UNP P55882 EXPRESSION TAG SEQADV 1JXI GLN A -3 UNP P55882 EXPRESSION TAG SEQADV 1JXI GLY A -2 UNP P55882 EXPRESSION TAG SEQADV 1JXI ARG A -1 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS A 0 UNP P55882 EXPRESSION TAG SEQADV 1JXI MET B -21 UNP P55882 EXPRESSION TAG SEQADV 1JXI GLY B -20 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -19 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -18 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -17 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -16 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -15 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -14 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -13 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -12 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -11 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -10 UNP P55882 EXPRESSION TAG SEQADV 1JXI SER B -9 UNP P55882 EXPRESSION TAG SEQADV 1JXI SER B -8 UNP P55882 EXPRESSION TAG SEQADV 1JXI GLY B -7 UNP P55882 EXPRESSION TAG SEQADV 1JXI TYR B -6 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B -5 UNP P55882 EXPRESSION TAG SEQADV 1JXI ILE B -4 UNP P55882 EXPRESSION TAG SEQADV 1JXI GLN B -3 UNP P55882 EXPRESSION TAG SEQADV 1JXI GLY B -2 UNP P55882 EXPRESSION TAG SEQADV 1JXI ARG B -1 UNP P55882 EXPRESSION TAG SEQADV 1JXI HIS B 0 UNP P55882 EXPRESSION TAG SEQRES 1 A 288 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SER SEQRES 2 A 288 SER GLY TYR HIS ILE GLN GLY ARG HIS MET GLN ARG ILE SEQRES 3 A 288 ASN ALA LEU THR ILE ALA GLY THR ASP PRO SER GLY GLY SEQRES 4 A 288 ALA GLY ILE GLN ALA ASP LEU LYS THR PHE SER ALA LEU SEQRES 5 A 288 GLY ALA TYR GLY CYS SER VAL ILE THR ALA LEU VAL ALA SEQRES 6 A 288 GLU ASN THR CYS GLY VAL GLN SER VAL TYR ARG ILE GLU SEQRES 7 A 288 PRO ASP PHE VAL ALA ALA GLN LEU ASP SER VAL PHE SER SEQRES 8 A 288 ASP VAL ARG ILE ASP THR THR LYS ILE GLY MET LEU ALA SEQRES 9 A 288 GLU THR ASP ILE VAL GLU ALA VAL ALA GLU ARG LEU GLN SEQRES 10 A 288 ARG HIS HIS VAL ARG ASN VAL VAL LEU ASP THR VAL MET SEQRES 11 A 288 LEU ALA LYS SER GLY ASP PRO LEU LEU SER PRO SER ALA SEQRES 12 A 288 ILE GLU THR LEU ARG VAL ARG LEU LEU PRO GLN VAL SER SEQRES 13 A 288 LEU ILE THR PRO ASN LEU PRO GLU ALA ALA ALA LEU LEU SEQRES 14 A 288 ASP ALA PRO HIS ALA ARG THR GLU GLN GLU MET LEU ALA SEQRES 15 A 288 GLN GLY ARG ALA LEU LEU ALA MET GLY CYS GLU ALA VAL SEQRES 16 A 288 LEU MET LYS GLY GLY HIS LEU GLU ASP ALA GLN SER PRO SEQRES 17 A 288 ASP TRP LEU PHE THR ARG GLU GLY GLU GLN ARG PHE SER SEQRES 18 A 288 ALA PRO ARG VAL ASN THR LYS ASN THR HIS GLY THR GLY SEQRES 19 A 288 CYS THR LEU SER ALA ALA LEU ALA ALA LEU ARG PRO ARG SEQRES 20 A 288 HIS ARG SER TRP GLY GLU THR VAL ASN GLU ALA LYS ALA SEQRES 21 A 288 TRP LEU SER ALA ALA LEU ALA GLN ALA ASP THR LEU GLU SEQRES 22 A 288 VAL GLY LYS GLY ILE GLY PRO VAL HIS HIS PHE HIS ALA SEQRES 23 A 288 TRP TRP SEQRES 1 B 288 MET GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS SER SEQRES 2 B 288 SER GLY TYR HIS ILE GLN GLY ARG HIS MET GLN ARG ILE SEQRES 3 B 288 ASN ALA LEU THR ILE ALA GLY THR ASP PRO SER GLY GLY SEQRES 4 B 288 ALA GLY ILE GLN ALA ASP LEU LYS THR PHE SER ALA LEU SEQRES 5 B 288 GLY ALA TYR GLY CYS SER VAL ILE THR ALA LEU VAL ALA SEQRES 6 B 288 GLU ASN THR CYS GLY VAL GLN SER VAL TYR ARG ILE GLU SEQRES 7 B 288 PRO ASP PHE VAL ALA ALA GLN LEU ASP SER VAL PHE SER SEQRES 8 B 288 ASP VAL ARG ILE ASP THR THR LYS ILE GLY MET LEU ALA SEQRES 9 B 288 GLU THR ASP ILE VAL GLU ALA VAL ALA GLU ARG LEU GLN SEQRES 10 B 288 ARG HIS HIS VAL ARG ASN VAL VAL LEU ASP THR VAL MET SEQRES 11 B 288 LEU ALA LYS SER GLY ASP PRO LEU LEU SER PRO SER ALA SEQRES 12 B 288 ILE GLU THR LEU ARG VAL ARG LEU LEU PRO GLN VAL SER SEQRES 13 B 288 LEU ILE THR PRO ASN LEU PRO GLU ALA ALA ALA LEU LEU SEQRES 14 B 288 ASP ALA PRO HIS ALA ARG THR GLU GLN GLU MET LEU ALA SEQRES 15 B 288 GLN GLY ARG ALA LEU LEU ALA MET GLY CYS GLU ALA VAL SEQRES 16 B 288 LEU MET LYS GLY GLY HIS LEU GLU ASP ALA GLN SER PRO SEQRES 17 B 288 ASP TRP LEU PHE THR ARG GLU GLY GLU GLN ARG PHE SER SEQRES 18 B 288 ALA PRO ARG VAL ASN THR LYS ASN THR HIS GLY THR GLY SEQRES 19 B 288 CYS THR LEU SER ALA ALA LEU ALA ALA LEU ARG PRO ARG SEQRES 20 B 288 HIS ARG SER TRP GLY GLU THR VAL ASN GLU ALA LYS ALA SEQRES 21 B 288 TRP LEU SER ALA ALA LEU ALA GLN ALA ASP THR LEU GLU SEQRES 22 B 288 VAL GLY LYS GLY ILE GLY PRO VAL HIS HIS PHE HIS ALA SEQRES 23 B 288 TRP TRP HET SO4 A2003 5 HET SO4 A2005 5 HET HMH A2001 10 HET SO4 B2004 5 HET SO4 B2006 5 HET HMH B2002 10 HETNAM SO4 SULFATE ION HETNAM HMH 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE FORMUL 3 SO4 4(O4 S 2-) FORMUL 5 HMH 2(C6 H9 N3 O) FORMUL 9 HOH *74(H2 O) HELIX 1 1 ALA A 18 LEU A 30 1 13 HELIX 2 2 GLU A 56 SER A 69 1 14 HELIX 3 3 GLU A 83 HIS A 97 1 15 HELIX 4 4 SER A 118 LEU A 129 1 12 HELIX 5 5 LEU A 130 VAL A 133 5 4 HELIX 6 6 ASN A 139 ASP A 148 1 10 HELIX 7 7 THR A 154 MET A 168 1 15 HELIX 8 8 GLY A 210 ARG A 223 1 14 HELIX 9 9 PRO A 224 HIS A 226 5 3 HELIX 10 10 SER A 228 ALA A 245 1 18 HELIX 11 11 GLN A 246 LEU A 250 5 5 HELIX 12 12 ALA B 18 LEU B 30 1 13 HELIX 13 13 GLU B 56 SER B 69 1 14 HELIX 14 14 GLU B 83 HIS B 97 1 15 HELIX 15 15 SER B 118 LEU B 129 1 12 HELIX 16 16 LEU B 130 VAL B 133 5 4 HELIX 17 17 ASN B 139 ASP B 148 1 10 HELIX 18 18 THR B 154 MET B 168 1 15 HELIX 19 19 GLY B 210 ARG B 223 1 14 HELIX 20 20 PRO B 224 HIS B 226 5 3 HELIX 21 21 SER B 228 ALA B 245 1 18 HELIX 22 22 GLN B 246 LEU B 250 5 5 SHEET 1 A 9 GLY A 48 ARG A 54 0 SHEET 2 A 9 TYR A 33 ASN A 45 -1 N LEU A 41 O TYR A 53 SHEET 3 A 9 ASN A 5 GLY A 11 1 N THR A 8 O VAL A 37 SHEET 4 A 9 THR A 75 ILE A 78 1 O LYS A 77 N LEU A 7 SHEET 5 A 9 VAL A 102 ASP A 105 1 O VAL A 103 N THR A 76 SHEET 6 A 9 LEU A 135 THR A 137 1 O LEU A 135 N LEU A 104 SHEET 7 A 9 ALA A 172 MET A 175 1 O LEU A 174 N ILE A 136 SHEET 8 A 9 TRP A 188 PHE A 190 -1 O PHE A 190 N VAL A 173 SHEET 9 A 9 GLU A 195 ARG A 197 -1 O GLN A 196 N LEU A 189 SHEET 1 B 9 GLY B 48 ARG B 54 0 SHEET 2 B 9 TYR B 33 ASN B 45 -1 N LEU B 41 O TYR B 53 SHEET 3 B 9 ASN B 5 GLY B 11 1 N THR B 8 O VAL B 37 SHEET 4 B 9 THR B 75 ILE B 78 1 O THR B 75 N LEU B 7 SHEET 5 B 9 VAL B 102 ASP B 105 1 O VAL B 103 N THR B 76 SHEET 6 B 9 LEU B 135 THR B 137 1 O LEU B 135 N LEU B 104 SHEET 7 B 9 ALA B 172 MET B 175 1 O LEU B 174 N ILE B 136 SHEET 8 B 9 TRP B 188 PHE B 190 -1 O PHE B 190 N VAL B 173 SHEET 9 B 9 GLU B 195 ARG B 197 -1 O GLN B 196 N LEU B 189 SITE 1 AC1 6 ASP A 105 THR A 106 GLU A 142 LYS A 176 SITE 2 AC1 6 GLY A 212 SO4 A2005 SITE 1 AC2 6 ASP B 105 THR B 106 GLU B 142 LYS B 176 SITE 2 AC2 6 GLY B 212 SO4 B2006 SITE 1 AC3 5 THR A 208 HIS A 209 GLY A 210 HMH A2001 SITE 2 AC3 5 SO4 A2003 SITE 1 AC4 6 THR B 208 GLY B 210 THR B 211 GLY B 212 SITE 2 AC4 6 HMH B2002 SO4 B2004 SITE 1 AC5 7 GLY A 11 THR A 12 GLU A 44 LYS A 111 SITE 2 AC5 7 CYS A 213 SO4 A2005 HOH A2023 SITE 1 AC6 7 GLY B 11 THR B 12 GLU B 44 MET B 80 SITE 2 AC6 7 CYS B 213 SO4 B2006 HOH B2014 CRYST1 77.750 77.750 183.490 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012862 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012862 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005450 0.00000