data_1L1M # _entry.id 1L1M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1L1M pdb_00001l1m 10.2210/pdb1l1m/pdb RCSB RCSB015560 ? ? WWPDB D_1000015560 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1L1M _pdbx_database_status.recvd_initial_deposition_date 2002-02-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kalodimos, C.G.' 1 'Bonvin, A.M.J.J.' 2 'Salinas, R.K.' 3 'Wechselberger, R.' 4 'Boelens, R.' 5 'Kaptein, R.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Plasticity in protein-DNA recognition: lac repressor interacts with its natural operator 01 through alternative conformations of its DNA-binding domain. ; 'EMBO J.' 21 2866 2876 2002 EMJODG UK 0261-4189 0897 ? 12065400 10.1093/emboj/cdf318 1 'Strong DNA binding by covalently linked dimeric lac headpiece: evidence for the crucial role of the hinge helices' Proc.Natl.Acad.Sci.USA 98 6039 6044 2001 PNASA6 US 0027-8424 0040 ? ? 10.1073/pnas.101129898 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kalodimos, C.G.' 1 ? primary 'Bonvin, A.M.' 2 ? primary 'Salinas, R.K.' 3 ? primary 'Wechselberger, R.' 4 ? primary 'Boelens, R.' 5 ? primary 'Kaptein, R.' 6 ? 1 'Kalodimos, C.G.' 7 ? 1 'Folkers, G.' 8 ? 1 'Boelens, R.' 9 ? 1 'Kaptein, R.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*TP*T)-3'" 7143.645 1 ? ? ? 'Lac operator O1; this is the wild-type operator sequence of the lac operon in E. coli.' 2 polymer syn "5'-D(*AP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3'" 6974.534 1 ? ? ? 'Lac operator O1; this is the wild-type operator sequence of the lac operon in E. coli.' 3 polymer man 'Lactose operon repressor' 6822.755 2 ? V52C 'N-terminal DNA-binding domain, Residues 1-62' ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DG)(DA)(DA)(DT)(DT)(DG)(DT)(DG)(DA)(DG)(DC)(DG)(DG)(DA)(DT)(DA)(DA)(DC)(DA)(DA) (DT)(DT)(DT) ; GAATTGTGAGCGGATAACAATTT C ? 2 polydeoxyribonucleotide no no ;(DA)(DA)(DA)(DT)(DT)(DG)(DT)(DT)(DA)(DT)(DC)(DC)(DG)(DC)(DT)(DC)(DA)(DC)(DA)(DA) (DT)(DT)(DC) ; AAATTGTTATCCGCTCACAATTC D ? 3 'polypeptide(L)' no no MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRCAQQLAGKQSL MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRCAQQLAGKQSL A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DA n 1 3 DA n 1 4 DT n 1 5 DT n 1 6 DG n 1 7 DT n 1 8 DG n 1 9 DA n 1 10 DG n 1 11 DC n 1 12 DG n 1 13 DG n 1 14 DA n 1 15 DT n 1 16 DA n 1 17 DA n 1 18 DC n 1 19 DA n 1 20 DA n 1 21 DT n 1 22 DT n 1 23 DT n 2 1 DA n 2 2 DA n 2 3 DA n 2 4 DT n 2 5 DT n 2 6 DG n 2 7 DT n 2 8 DT n 2 9 DA n 2 10 DT n 2 11 DC n 2 12 DC n 2 13 DG n 2 14 DC n 2 15 DT n 2 16 DC n 2 17 DA n 2 18 DC n 2 19 DA n 2 20 DA n 2 21 DT n 2 22 DT n 2 23 DC n 3 1 MET n 3 2 LYS n 3 3 PRO n 3 4 VAL n 3 5 THR n 3 6 LEU n 3 7 TYR n 3 8 ASP n 3 9 VAL n 3 10 ALA n 3 11 GLU n 3 12 TYR n 3 13 ALA n 3 14 GLY n 3 15 VAL n 3 16 SER n 3 17 TYR n 3 18 GLN n 3 19 THR n 3 20 VAL n 3 21 SER n 3 22 ARG n 3 23 VAL n 3 24 VAL n 3 25 ASN n 3 26 GLN n 3 27 ALA n 3 28 SER n 3 29 HIS n 3 30 VAL n 3 31 SER n 3 32 ALA n 3 33 LYS n 3 34 THR n 3 35 ARG n 3 36 GLU n 3 37 LYS n 3 38 VAL n 3 39 GLU n 3 40 ALA n 3 41 ALA n 3 42 MET n 3 43 ALA n 3 44 GLU n 3 45 LEU n 3 46 ASN n 3 47 TYR n 3 48 ILE n 3 49 PRO n 3 50 ASN n 3 51 ARG n 3 52 CYS n 3 53 ALA n 3 54 GLN n 3 55 GLN n 3 56 LEU n 3 57 ALA n 3 58 GLY n 3 59 LYS n 3 60 GLN n 3 61 SER n 3 62 LEU n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene LACI _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain DH9 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGP1-2,PET-HP62 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP LACI_ECOLI 3 ;MKPVTLYDVAEYAGVSYQTVSRVVNQASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIV AAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSII FSHEDGTRLGVEHLVALGHQQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVPT AMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPSTTIKQDFRLLGQTSVDRLLQLSQGQAVKGNQLLP VSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLESGQ ; 1 P03023 ? 2 PDB 1L1M 1 ? ? 1L1M ? 3 PDB 1L1M 2 ? ? 1L1M ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1L1M A 1 ? 62 ? P03023 1 ? 62 ? 1 62 2 1 1L1M B 1 ? 62 ? P03023 1 ? 62 ? 1 62 3 2 1L1M C 1 ? 23 ? 1L1M 1 ? 23 ? 1 23 4 3 1L1M D 1 ? 23 ? 1L1M 1 ? 23 ? 1 23 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1L1M CYS A 52 ? UNP P03023 VAL 52 'engineered mutation' 52 1 2 1L1M CYS B 52 ? UNP P03023 VAL 52 'engineered mutation' 52 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY 3 1 1 '2D NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 315 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '10mM KPi, 20mM KCl' _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2mM Lac-HP62-V52C U-15N,13C, 10mM KPi, 20mM KCl, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker DRX 750 2 ? Bruker DRX 600 # _pdbx_nmr_refine.entry_id 1L1M _pdbx_nmr_refine.method 'SIMULATED ANNEALING FOLLOWED BY RESTRAINED MDR' _pdbx_nmr_refine.details ;The structure of the complex was calculated as follows. First the structure of the dimeric lac HP62-V52C was calculated using only protein NMR restraints. The 50 best structures were selected and docked onto the natural lac operator B-DNA using simulated annealing. Distance and planarity restraints for the DNA were incorporated in order to keep DNA close to B-DNA but allowing a bend necessary to accommodate the two headpiece molecules on the DNA. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1L1M _pdbx_nmr_details.text ;This structure was determined using standard 2D and 3D homo- and heteronuclearnuclear techniques. 13C-15N labeled protein was used and unlabeled nucleotide. IN ADDITION ISOTOPE FILTER EXPERIMENTS WERE APPLIED TO OBTAIN ADDITIONAL ASSIGNMENTS AND TO ASSIGN INTER-MOLECULAR NOES. FOR FURTHER DETAILS SEE THE REFERENCE DESCRIBING THE STRUCTURES. ; # _pdbx_nmr_ensemble.entry_id 1L1M _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1L1M _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 3.1 collection Bruker 1 NMRPipe 1.0 processing Delaglio 2 NMRView 5.0.4 'data analysis' Johnson 3 CNS 1.1 'structure solution' Brunger 4 CNS 1.1 refinement Brunger 5 # _exptl.entry_id 1L1M _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1L1M _struct.title 'SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1L1M _struct_keywords.pdbx_keywords 'TRANSCRIPTION REGULATOR/DNA' _struct_keywords.text ;TRANSCRIPTION REGULATION, LAC OPERON, LAC REPRESSOR, NATURAL LAC OPERATOR, ASYMMETRIC DNA-BINDING, HTH, TRANSCRIPTION REGULATOR-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 5 ? GLY C 14 ? THR A 5 GLY A 14 1 ? 10 HELX_P HELX_P2 2 SER C 16 ? GLN C 26 ? SER A 16 GLN A 26 1 ? 11 HELX_P HELX_P3 3 SER C 31 ? LEU C 45 ? SER A 31 LEU A 45 1 ? 15 HELX_P HELX_P4 4 ASN C 50 ? GLY C 58 ? ASN A 50 GLY A 58 1 ? 9 HELX_P HELX_P5 5 THR D 5 ? GLY D 14 ? THR B 5 GLY B 14 1 ? 10 HELX_P HELX_P6 6 SER D 16 ? ASN D 25 ? SER B 16 ASN B 25 1 ? 10 HELX_P HELX_P7 7 SER D 31 ? LEU D 45 ? SER B 31 LEU B 45 1 ? 15 HELX_P HELX_P8 8 ASN D 50 ? GLY D 58 ? ASN B 50 GLY B 58 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? C CYS 52 SG ? ? ? 1_555 D CYS 52 SG ? ? A CYS 52 B CYS 52 1_555 ? ? ? ? ? ? ? 2.031 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 23 N3 ? ? C DG 1 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 23 O2 ? ? C DG 1 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 23 N4 ? ? C DG 1 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 22 N3 ? ? C DA 2 D DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 22 O4 ? ? C DA 2 D DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 21 N3 ? ? C DA 3 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 21 O4 ? ? C DA 3 D DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 20 N1 ? ? C DT 4 D DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 20 N6 ? ? C DT 4 D DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 19 N1 ? ? C DT 5 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 19 N6 ? ? C DT 5 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 18 N3 ? ? C DG 6 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 18 O2 ? ? C DG 6 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 18 N4 ? ? C DG 6 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 17 N1 ? ? C DT 7 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 17 N6 ? ? C DT 7 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 16 N3 ? ? C DG 8 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 16 O2 ? ? C DG 8 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 16 N4 ? ? C DG 8 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 15 N3 ? ? C DA 9 D DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 15 O4 ? ? C DA 9 D DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 14 N3 ? ? C DG 10 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 14 O2 ? ? C DG 10 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 14 N4 ? ? C DG 10 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 13 N1 ? ? C DC 11 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 13 O6 ? ? C DC 11 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 13 N2 ? ? C DC 11 D DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 12 N3 ? ? C DG 12 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 12 O2 ? ? C DG 12 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 12 N4 ? ? C DG 12 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 11 N3 ? ? C DG 13 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 11 O2 ? ? C DG 13 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 11 N4 ? ? C DG 13 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 10 N3 ? ? C DA 14 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 10 O4 ? ? C DA 14 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 9 N1 ? ? C DT 15 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 9 N6 ? ? C DT 15 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DA 16 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 16 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DA 16 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 16 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 7 N3 ? ? C DA 17 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 7 O4 ? ? C DA 17 D DT 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 18 N3 ? ? ? 1_555 B DG 6 N1 ? ? C DC 18 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 18 N4 ? ? ? 1_555 B DG 6 O6 ? ? C DC 18 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DC 18 O2 ? ? ? 1_555 B DG 6 N2 ? ? C DC 18 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DA 19 N1 ? ? ? 1_555 B DT 5 N3 ? ? C DA 19 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DA 19 N6 ? ? ? 1_555 B DT 5 O4 ? ? C DA 19 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DA 20 N1 ? ? ? 1_555 B DT 4 N3 ? ? C DA 20 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DA 20 N6 ? ? ? 1_555 B DT 4 O4 ? ? C DA 20 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DT 21 N3 ? ? ? 1_555 B DA 3 N1 ? ? C DT 21 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A DT 21 O4 ? ? ? 1_555 B DA 3 N6 ? ? C DT 21 D DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A DT 22 N3 ? ? ? 1_555 B DA 2 N1 ? ? C DT 22 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A DT 22 O4 ? ? ? 1_555 B DA 2 N6 ? ? C DT 22 D DA 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A DT 23 N3 ? ? ? 1_555 B DA 1 N1 ? ? C DT 23 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A DT 23 O4 ? ? ? 1_555 B DA 1 N6 ? ? C DT 23 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? hydrog ? ? # _database_PDB_matrix.entry_id 1L1M _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1L1M _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G C . n A 1 2 DA 2 2 2 DA A C . n A 1 3 DA 3 3 3 DA A C . n A 1 4 DT 4 4 4 DT T C . n A 1 5 DT 5 5 5 DT T C . n A 1 6 DG 6 6 6 DG G C . n A 1 7 DT 7 7 7 DT T C . n A 1 8 DG 8 8 8 DG G C . n A 1 9 DA 9 9 9 DA A C . n A 1 10 DG 10 10 10 DG G C . n A 1 11 DC 11 11 11 DC C C . n A 1 12 DG 12 12 12 DG G C . n A 1 13 DG 13 13 13 DG G C . n A 1 14 DA 14 14 14 DA A C . n A 1 15 DT 15 15 15 DT T C . n A 1 16 DA 16 16 16 DA A C . n A 1 17 DA 17 17 17 DA A C . n A 1 18 DC 18 18 18 DC C C . n A 1 19 DA 19 19 19 DA A C . n A 1 20 DA 20 20 20 DA A C . n A 1 21 DT 21 21 21 DT T C . n A 1 22 DT 22 22 22 DT T C . n A 1 23 DT 23 23 23 DT T C . n B 2 1 DA 1 1 1 DA A D . n B 2 2 DA 2 2 2 DA A D . n B 2 3 DA 3 3 3 DA A D . n B 2 4 DT 4 4 4 DT T D . n B 2 5 DT 5 5 5 DT T D . n B 2 6 DG 6 6 6 DG G D . n B 2 7 DT 7 7 7 DT T D . n B 2 8 DT 8 8 8 DT T D . n B 2 9 DA 9 9 9 DA A D . n B 2 10 DT 10 10 10 DT T D . n B 2 11 DC 11 11 11 DC C D . n B 2 12 DC 12 12 12 DC C D . n B 2 13 DG 13 13 13 DG G D . n B 2 14 DC 14 14 14 DC C D . n B 2 15 DT 15 15 15 DT T D . n B 2 16 DC 16 16 16 DC C D . n B 2 17 DA 17 17 17 DA A D . n B 2 18 DC 18 18 18 DC C D . n B 2 19 DA 19 19 19 DA A D . n B 2 20 DA 20 20 20 DA A D . n B 2 21 DT 21 21 21 DT T D . n B 2 22 DT 22 22 22 DT T D . n B 2 23 DC 23 23 23 DC C D . n C 3 1 MET 1 1 1 MET MET A . n C 3 2 LYS 2 2 2 LYS LYS A . n C 3 3 PRO 3 3 3 PRO PRO A . n C 3 4 VAL 4 4 4 VAL VAL A . n C 3 5 THR 5 5 5 THR THR A . n C 3 6 LEU 6 6 6 LEU LEU A . n C 3 7 TYR 7 7 7 TYR TYR A . n C 3 8 ASP 8 8 8 ASP ASP A . n C 3 9 VAL 9 9 9 VAL VAL A . n C 3 10 ALA 10 10 10 ALA ALA A . n C 3 11 GLU 11 11 11 GLU GLU A . n C 3 12 TYR 12 12 12 TYR TYR A . n C 3 13 ALA 13 13 13 ALA ALA A . n C 3 14 GLY 14 14 14 GLY GLY A . n C 3 15 VAL 15 15 15 VAL VAL A . n C 3 16 SER 16 16 16 SER SER A . n C 3 17 TYR 17 17 17 TYR TYR A . n C 3 18 GLN 18 18 18 GLN GLN A . n C 3 19 THR 19 19 19 THR THR A . n C 3 20 VAL 20 20 20 VAL VAL A . n C 3 21 SER 21 21 21 SER SER A . n C 3 22 ARG 22 22 22 ARG ARG A . n C 3 23 VAL 23 23 23 VAL VAL A . n C 3 24 VAL 24 24 24 VAL VAL A . n C 3 25 ASN 25 25 25 ASN ASN A . n C 3 26 GLN 26 26 26 GLN GLN A . n C 3 27 ALA 27 27 27 ALA ALA A . n C 3 28 SER 28 28 28 SER SER A . n C 3 29 HIS 29 29 29 HIS HIS A . n C 3 30 VAL 30 30 30 VAL VAL A . n C 3 31 SER 31 31 31 SER SER A . n C 3 32 ALA 32 32 32 ALA ALA A . n C 3 33 LYS 33 33 33 LYS LYS A . n C 3 34 THR 34 34 34 THR THR A . n C 3 35 ARG 35 35 35 ARG ARG A . n C 3 36 GLU 36 36 36 GLU GLU A . n C 3 37 LYS 37 37 37 LYS LYS A . n C 3 38 VAL 38 38 38 VAL VAL A . n C 3 39 GLU 39 39 39 GLU GLU A . n C 3 40 ALA 40 40 40 ALA ALA A . n C 3 41 ALA 41 41 41 ALA ALA A . n C 3 42 MET 42 42 42 MET MET A . n C 3 43 ALA 43 43 43 ALA ALA A . n C 3 44 GLU 44 44 44 GLU GLU A . n C 3 45 LEU 45 45 45 LEU LEU A . n C 3 46 ASN 46 46 46 ASN ASN A . n C 3 47 TYR 47 47 47 TYR TYR A . n C 3 48 ILE 48 48 48 ILE ILE A . n C 3 49 PRO 49 49 49 PRO PRO A . n C 3 50 ASN 50 50 50 ASN ASN A . n C 3 51 ARG 51 51 51 ARG ARG A . n C 3 52 CYS 52 52 52 CYS CYS A . n C 3 53 ALA 53 53 53 ALA ALA A . n C 3 54 GLN 54 54 54 GLN GLN A . n C 3 55 GLN 55 55 55 GLN GLN A . n C 3 56 LEU 56 56 56 LEU LEU A . n C 3 57 ALA 57 57 57 ALA ALA A . n C 3 58 GLY 58 58 58 GLY GLY A . n C 3 59 LYS 59 59 59 LYS LYS A . n C 3 60 GLN 60 60 60 GLN GLN A . n C 3 61 SER 61 61 61 SER SER A . n C 3 62 LEU 62 62 62 LEU LEU A . n D 3 1 MET 1 1 1 MET MET B . n D 3 2 LYS 2 2 2 LYS LYS B . n D 3 3 PRO 3 3 3 PRO PRO B . n D 3 4 VAL 4 4 4 VAL VAL B . n D 3 5 THR 5 5 5 THR THR B . n D 3 6 LEU 6 6 6 LEU LEU B . n D 3 7 TYR 7 7 7 TYR TYR B . n D 3 8 ASP 8 8 8 ASP ASP B . n D 3 9 VAL 9 9 9 VAL VAL B . n D 3 10 ALA 10 10 10 ALA ALA B . n D 3 11 GLU 11 11 11 GLU GLU B . n D 3 12 TYR 12 12 12 TYR TYR B . n D 3 13 ALA 13 13 13 ALA ALA B . n D 3 14 GLY 14 14 14 GLY GLY B . n D 3 15 VAL 15 15 15 VAL VAL B . n D 3 16 SER 16 16 16 SER SER B . n D 3 17 TYR 17 17 17 TYR TYR B . n D 3 18 GLN 18 18 18 GLN GLN B . n D 3 19 THR 19 19 19 THR THR B . n D 3 20 VAL 20 20 20 VAL VAL B . n D 3 21 SER 21 21 21 SER SER B . n D 3 22 ARG 22 22 22 ARG ARG B . n D 3 23 VAL 23 23 23 VAL VAL B . n D 3 24 VAL 24 24 24 VAL VAL B . n D 3 25 ASN 25 25 25 ASN ASN B . n D 3 26 GLN 26 26 26 GLN GLN B . n D 3 27 ALA 27 27 27 ALA ALA B . n D 3 28 SER 28 28 28 SER SER B . n D 3 29 HIS 29 29 29 HIS HIS B . n D 3 30 VAL 30 30 30 VAL VAL B . n D 3 31 SER 31 31 31 SER SER B . n D 3 32 ALA 32 32 32 ALA ALA B . n D 3 33 LYS 33 33 33 LYS LYS B . n D 3 34 THR 34 34 34 THR THR B . n D 3 35 ARG 35 35 35 ARG ARG B . n D 3 36 GLU 36 36 36 GLU GLU B . n D 3 37 LYS 37 37 37 LYS LYS B . n D 3 38 VAL 38 38 38 VAL VAL B . n D 3 39 GLU 39 39 39 GLU GLU B . n D 3 40 ALA 40 40 40 ALA ALA B . n D 3 41 ALA 41 41 41 ALA ALA B . n D 3 42 MET 42 42 42 MET MET B . n D 3 43 ALA 43 43 43 ALA ALA B . n D 3 44 GLU 44 44 44 GLU GLU B . n D 3 45 LEU 45 45 45 LEU LEU B . n D 3 46 ASN 46 46 46 ASN ASN B . n D 3 47 TYR 47 47 47 TYR TYR B . n D 3 48 ILE 48 48 48 ILE ILE B . n D 3 49 PRO 49 49 49 PRO PRO B . n D 3 50 ASN 50 50 50 ASN ASN B . n D 3 51 ARG 51 51 51 ARG ARG B . n D 3 52 CYS 52 52 52 CYS CYS B . n D 3 53 ALA 53 53 53 ALA ALA B . n D 3 54 GLN 54 54 54 GLN GLN B . n D 3 55 GLN 55 55 55 GLN GLN B . n D 3 56 LEU 56 56 56 LEU LEU B . n D 3 57 ALA 57 57 57 ALA ALA B . n D 3 58 GLY 58 58 58 GLY GLY B . n D 3 59 LYS 59 59 59 LYS LYS B . n D 3 60 GLN 60 60 60 GLN GLN B . n D 3 61 SER 61 61 61 SER SER B . n D 3 62 LEU 62 62 62 LEU LEU B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-06-26 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.53 2 1 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.58 3 1 H61 C DA 19 ? ? O4 D DT 5 ? ? 1.60 4 2 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.55 5 2 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.57 6 2 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.59 7 2 H21 C DG 1 ? ? O2 D DC 23 ? ? 1.59 8 2 O2 C DC 18 ? ? H21 D DG 6 ? ? 1.60 9 3 HG A LEU 6 ? ? HB2 A TYR 17 ? ? 1.33 10 3 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.56 11 3 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.56 12 3 H21 C DG 8 ? ? O2 D DC 16 ? ? 1.58 13 3 H21 C DG 1 ? ? O2 D DC 23 ? ? 1.58 14 4 H22 C DG 13 ? ? HB2 B ALA 57 ? ? 1.24 15 4 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.55 16 4 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.57 17 5 H22 C DG 13 ? ? HB1 B ALA 57 ? ? 1.28 18 5 H21 C DG 1 ? ? O2 D DC 23 ? ? 1.54 19 5 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.55 20 5 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.56 21 5 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.59 22 6 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.56 23 6 H21 C DG 8 ? ? O2 D DC 16 ? ? 1.58 24 6 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.59 25 7 HB A VAL 4 ? ? HA A TYR 47 ? ? 1.24 26 7 O2 C DC 18 ? ? H21 D DG 6 ? ? 1.56 27 7 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.56 28 7 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.58 29 8 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.52 30 8 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.55 31 8 N7 C DA 14 ? ? HH B TYR 17 ? ? 1.55 32 8 HG1 B THR 5 ? ? OD2 B ASP 8 ? ? 1.57 33 8 H21 C DG 1 ? ? O2 D DC 23 ? ? 1.59 34 8 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.60 35 9 H22 C DG 13 ? ? HB3 B ALA 57 ? ? 1.22 36 9 HG A LEU 6 ? ? HB2 A TYR 17 ? ? 1.33 37 9 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.58 38 10 HA B ARG 22 ? ? HB2 B GLN 26 ? ? 1.26 39 10 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.52 40 10 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.58 41 10 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.58 42 11 HA B VAL 23 ? ? HA B ALA 27 ? ? 1.29 43 11 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.52 44 11 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.55 45 11 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.58 46 12 HA A GLN 55 ? ? HB2 A LYS 59 ? ? 1.19 47 12 H22 C DG 13 ? ? HB2 B ALA 57 ? ? 1.22 48 12 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.56 49 12 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.58 50 12 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.60 51 13 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.57 52 13 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.58 53 13 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.58 54 14 H22 C DG 13 ? ? HB1 B ALA 57 ? ? 1.27 55 14 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.53 56 14 O2 C DC 18 ? ? H21 D DG 6 ? ? 1.56 57 14 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.56 58 14 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.58 59 14 N7 C DA 14 ? ? HH B TYR 17 ? ? 1.58 60 15 H22 C DG 13 ? ? HB1 B ALA 57 ? ? 1.27 61 15 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.54 62 15 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.55 63 15 N7 C DA 14 ? ? HH B TYR 17 ? ? 1.58 64 15 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.58 65 15 H21 C DG 1 ? ? O2 D DC 23 ? ? 1.58 66 16 HB B VAL 4 ? ? H B ILE 48 ? ? 1.34 67 16 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.56 68 16 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.57 69 16 H61 C DA 19 ? ? O4 D DT 5 ? ? 1.59 70 16 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.59 71 16 H21 C DG 1 ? ? O2 D DC 23 ? ? 1.60 72 17 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.56 73 17 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.57 74 18 HG3 A ARG 22 ? ? HG21 A VAL 30 ? ? 1.34 75 18 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.53 76 18 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.55 77 18 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.58 78 19 "H2'" C DG 13 ? ? HE1 B TYR 7 ? ? 1.33 79 19 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.53 80 19 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.54 81 20 HA B ARG 22 ? ? HB2 B GLN 26 ? ? 1.26 82 20 H21 C DG 13 ? ? O2 D DC 11 ? ? 1.52 83 20 H21 C DG 10 ? ? O2 D DC 14 ? ? 1.58 84 20 H21 C DG 6 ? ? O2 D DC 18 ? ? 1.58 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 16 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 C _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 13 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 C _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 13 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N9 _pdbx_validate_rmsd_angle.auth_asym_id_3 C _pdbx_validate_rmsd_angle.auth_comp_id_3 DG _pdbx_validate_rmsd_angle.auth_seq_id_3 13 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.34 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 2.04 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 15 ? ? -123.56 -166.54 2 1 GLN A 26 ? ? 62.49 64.59 3 1 ALA A 27 ? ? -121.75 -84.22 4 1 ASN A 46 ? ? 63.63 64.98 5 1 LYS A 59 ? ? 69.62 104.62 6 1 ASN B 25 ? ? -123.52 -73.26 7 1 PRO B 49 ? ? -38.67 138.81 8 1 ASN B 50 ? ? -62.59 97.13 9 1 LYS B 59 ? ? -153.77 65.90 10 2 ALA A 27 ? ? -95.15 -137.15 11 2 ASN A 46 ? ? 68.34 63.02 12 2 ASN B 25 ? ? -98.20 -75.08 13 2 ALA B 27 ? ? -50.77 95.20 14 2 SER B 31 ? ? -86.77 41.26 15 2 ALA B 32 ? ? 67.84 -61.45 16 2 ASN B 46 ? ? 67.36 65.73 17 2 ASN B 50 ? ? -58.17 95.73 18 2 LYS B 59 ? ? 62.83 89.50 19 3 VAL A 15 ? ? -124.12 -166.15 20 3 ALA A 27 ? ? -94.14 -141.58 21 3 ASN A 46 ? ? 66.65 64.83 22 3 LYS A 59 ? ? 39.81 -138.83 23 3 LYS B 2 ? ? 62.09 70.56 24 3 ASN B 25 ? ? -64.29 -74.91 25 3 GLN B 26 ? ? -146.35 16.33 26 3 TYR B 47 ? ? -59.27 108.77 27 3 PRO B 49 ? ? -30.44 119.13 28 3 ASN B 50 ? ? -67.19 88.34 29 3 ALA B 57 ? ? -69.64 -80.29 30 3 LYS B 59 ? ? 70.40 120.81 31 4 ALA A 27 ? ? -85.89 30.17 32 4 SER A 28 ? ? 60.59 -172.82 33 4 ASN A 46 ? ? 67.75 63.50 34 4 ASN B 25 ? ? -128.45 -72.18 35 4 PRO B 49 ? ? -28.21 122.51 36 4 ALA B 57 ? ? -73.61 44.12 37 4 SER B 61 ? ? -88.73 41.04 38 5 ALA A 27 ? ? -103.02 -148.58 39 5 ASN A 46 ? ? 64.51 67.18 40 5 GLN A 60 ? ? -66.60 90.94 41 5 ASN B 25 ? ? -72.55 -73.74 42 5 GLN B 26 ? ? -167.23 41.06 43 5 ALA B 27 ? ? 64.61 -117.15 44 5 SER B 28 ? ? 58.94 120.23 45 5 TYR B 47 ? ? -52.66 108.99 46 5 PRO B 49 ? ? -30.86 130.49 47 5 LEU B 56 ? ? -70.63 -70.60 48 6 LYS A 2 ? ? -159.93 81.71 49 6 GLN A 26 ? ? -129.10 -53.38 50 6 SER A 31 ? ? -74.07 -89.14 51 6 ALA A 32 ? ? -160.24 -62.02 52 6 ASN A 46 ? ? 63.48 70.60 53 6 SER A 61 ? ? 66.50 -168.96 54 6 ASN B 25 ? ? -79.08 -85.91 55 6 ALA B 27 ? ? -28.82 96.55 56 6 ASN B 46 ? ? 61.65 63.32 57 6 ASN B 50 ? ? -60.14 99.71 58 6 LYS B 59 ? ? 67.53 162.34 59 7 VAL A 15 ? ? -129.29 -165.54 60 7 ALA A 27 ? ? -106.82 -153.07 61 7 ASN A 46 ? ? 69.50 62.27 62 7 LYS A 59 ? ? 32.95 -106.25 63 7 ASN B 25 ? ? -123.17 -70.55 64 7 PRO B 49 ? ? -39.35 129.66 65 7 ASN B 50 ? ? -54.74 99.73 66 7 GLN B 60 ? ? -100.24 72.33 67 8 LYS A 2 ? ? 70.68 119.19 68 8 GLN A 26 ? ? 62.17 63.40 69 8 ALA A 27 ? ? -106.63 -166.52 70 8 HIS A 29 ? ? 67.99 -60.52 71 8 LYS A 59 ? ? 72.28 106.42 72 8 GLN A 60 ? ? 69.29 109.47 73 8 ASN B 25 ? ? -126.40 -72.34 74 8 PRO B 49 ? ? -35.20 123.05 75 8 ASN B 50 ? ? -55.49 97.45 76 8 ALA B 57 ? ? -71.76 34.45 77 8 SER B 61 ? ? -94.23 57.28 78 9 VAL A 15 ? ? -127.10 -166.48 79 9 ALA A 27 ? ? -91.88 -159.06 80 9 ASN A 46 ? ? 67.42 65.63 81 9 GLN A 60 ? ? 72.69 127.55 82 9 GLN B 26 ? ? -144.38 -109.51 83 9 ALA B 27 ? ? -161.01 22.29 84 9 PRO B 49 ? ? -32.03 127.51 85 9 ASN B 50 ? ? -52.56 99.55 86 9 GLN B 60 ? ? 54.83 -112.98 87 10 VAL A 15 ? ? -118.96 -166.48 88 10 ALA A 27 ? ? -65.56 81.32 89 10 SER A 31 ? ? -70.81 -84.05 90 10 ALA A 32 ? ? -168.02 -54.72 91 10 ASN A 46 ? ? 63.85 67.01 92 10 ASN B 25 ? ? -146.95 -34.47 93 10 SER B 28 ? ? 71.93 179.66 94 10 HIS B 29 ? ? 37.92 36.35 95 10 PRO B 49 ? ? -31.61 131.78 96 10 ASN B 50 ? ? -60.36 84.59 97 10 LYS B 59 ? ? 64.30 92.66 98 11 LYS A 2 ? ? -173.54 -56.53 99 11 SER A 28 ? ? 64.66 -171.52 100 11 LYS A 59 ? ? 69.70 -52.90 101 11 ASN B 25 ? ? -75.47 -80.29 102 11 SER B 31 ? ? -76.69 37.47 103 11 ALA B 32 ? ? 68.11 -57.64 104 11 ASN B 46 ? ? 61.37 67.16 105 11 PRO B 49 ? ? -35.41 130.06 106 11 ASN B 50 ? ? -44.98 108.83 107 12 VAL A 15 ? ? -121.65 -167.63 108 12 ALA A 27 ? ? -116.67 -152.20 109 12 ASN A 46 ? ? 63.97 61.93 110 12 LYS B 2 ? ? 60.30 83.58 111 12 ASN B 25 ? ? -73.13 -86.39 112 12 GLN B 26 ? ? -153.18 44.79 113 12 ALA B 27 ? ? 60.11 -135.54 114 12 SER B 28 ? ? 65.23 137.87 115 12 ASN B 46 ? ? 68.82 61.29 116 12 TYR B 47 ? ? -55.00 108.37 117 12 PRO B 49 ? ? -27.24 126.75 118 12 SER B 61 ? ? 65.49 104.01 119 13 VAL A 15 ? ? -123.71 -164.24 120 13 SER A 28 ? ? 60.76 -174.60 121 13 ASN A 46 ? ? 62.16 66.84 122 13 LYS A 59 ? ? 70.34 -58.70 123 13 ASN B 25 ? ? -77.52 -74.88 124 13 GLN B 26 ? ? -169.03 47.08 125 13 ALA B 27 ? ? 57.87 -129.21 126 13 SER B 28 ? ? 70.74 124.20 127 13 PRO B 49 ? ? -34.27 125.45 128 13 LYS B 59 ? ? 69.15 -73.06 129 13 GLN B 60 ? ? -133.26 -46.04 130 13 SER B 61 ? ? -148.65 -17.93 131 14 VAL A 15 ? ? -124.47 -162.37 132 14 ALA A 27 ? ? -103.72 -155.90 133 14 ASN A 46 ? ? 62.92 67.28 134 14 LYS A 59 ? ? 68.19 112.82 135 14 LYS B 2 ? ? 53.28 75.19 136 14 ASN B 25 ? ? -119.52 -85.16 137 14 ALA B 27 ? ? -68.69 57.25 138 14 PRO B 49 ? ? -33.43 127.88 139 14 ASN B 50 ? ? -55.21 91.67 140 15 ASN A 46 ? ? 59.20 77.06 141 15 GLN A 60 ? ? 62.93 66.80 142 15 ASN B 25 ? ? -77.73 -73.24 143 15 GLN B 26 ? ? -168.27 44.45 144 15 ALA B 27 ? ? 62.03 -130.63 145 15 SER B 28 ? ? 67.31 148.28 146 15 SER B 31 ? ? -84.39 35.74 147 15 ALA B 32 ? ? 69.27 -53.66 148 15 PRO B 49 ? ? -35.84 127.07 149 15 ASN B 50 ? ? -52.76 99.54 150 15 LEU B 56 ? ? -66.46 -70.54 151 16 LYS A 2 ? ? 53.66 71.74 152 16 VAL A 15 ? ? -124.63 -166.52 153 16 GLN A 26 ? ? 57.79 76.13 154 16 SER A 28 ? ? 59.26 -166.09 155 16 ASN A 46 ? ? 67.00 65.92 156 16 GLN A 60 ? ? -93.38 30.57 157 16 LYS B 2 ? ? -160.36 114.07 158 16 ASN B 25 ? ? -80.24 -78.66 159 16 GLN B 26 ? ? -162.03 50.84 160 16 ALA B 27 ? ? 58.09 -126.58 161 16 SER B 28 ? ? 63.52 128.32 162 16 ASN B 46 ? ? 61.29 63.07 163 16 PRO B 49 ? ? -36.60 125.23 164 16 ASN B 50 ? ? -47.37 99.45 165 17 ALA A 27 ? ? -93.90 -144.19 166 17 ASN A 46 ? ? 66.02 69.48 167 17 LYS A 59 ? ? 34.22 -104.40 168 17 SER A 61 ? ? 66.67 -95.75 169 17 LYS B 2 ? ? 59.77 76.60 170 17 ASN B 25 ? ? -122.51 -68.73 171 17 ASN B 46 ? ? 76.78 57.32 172 17 PRO B 49 ? ? -33.52 118.64 173 18 ALA A 27 ? ? -102.79 -144.49 174 18 ASN A 46 ? ? 60.93 62.51 175 18 PRO A 49 ? ? -65.56 95.55 176 18 ASN B 25 ? ? -77.84 -79.78 177 18 GLN B 26 ? ? -152.79 43.31 178 18 ALA B 27 ? ? 52.63 -120.64 179 18 SER B 28 ? ? 67.68 133.62 180 18 HIS B 29 ? ? 67.83 -61.07 181 18 TYR B 47 ? ? -52.60 106.78 182 18 PRO B 49 ? ? -30.40 115.81 183 18 SER B 61 ? ? -164.91 -52.65 184 19 ALA A 27 ? ? -93.81 -155.32 185 19 GLN A 60 ? ? -98.56 39.48 186 19 ASN B 25 ? ? -125.00 -83.87 187 19 HIS B 29 ? ? 69.63 -58.52 188 19 VAL B 30 ? ? -57.58 102.75 189 19 PRO B 49 ? ? -29.71 128.55 190 19 ASN B 50 ? ? -68.52 75.55 191 19 LEU B 56 ? ? -65.97 -70.25 192 19 GLN B 60 ? ? -99.08 57.82 193 20 VAL A 15 ? ? -118.96 -166.48 194 20 ALA A 27 ? ? -65.56 81.32 195 20 SER A 31 ? ? -70.81 -84.05 196 20 ALA A 32 ? ? -168.02 -54.72 197 20 ASN A 46 ? ? 63.85 67.01 198 20 ASN B 25 ? ? -146.95 -34.47 199 20 SER B 28 ? ? 71.93 179.66 200 20 HIS B 29 ? ? 37.92 36.35 201 20 PRO B 49 ? ? -31.61 131.78 202 20 ASN B 50 ? ? -60.36 84.59 203 20 LYS B 59 ? ? 64.30 92.66 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1L1M 'double helix' 1L1M 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 23 1_555 -0.396 -0.195 -0.084 0.122 2.776 0.621 1 C_DG1:DC23_D C 1 ? D 23 ? 19 1 1 A DA 2 1_555 B DT 22 1_555 -0.005 -0.290 -0.120 0.857 0.733 -2.858 2 C_DA2:DT22_D C 2 ? D 22 ? 20 1 1 A DA 3 1_555 B DT 21 1_555 0.126 -0.213 -0.003 -1.446 0.327 0.159 3 C_DA3:DT21_D C 3 ? D 21 ? 20 1 1 A DT 4 1_555 B DA 20 1_555 -0.128 -0.135 -0.050 0.444 2.365 2.221 4 C_DT4:DA20_D C 4 ? D 20 ? 20 1 1 A DT 5 1_555 B DA 19 1_555 -0.189 -0.258 -0.237 1.750 3.877 -4.220 5 C_DT5:DA19_D C 5 ? D 19 ? 20 1 1 A DG 6 1_555 B DC 18 1_555 -0.003 -0.088 -0.114 -0.368 5.025 3.908 6 C_DG6:DC18_D C 6 ? D 18 ? 19 1 1 A DT 7 1_555 B DA 17 1_555 0.019 -0.175 -0.080 0.220 3.478 -0.762 7 C_DT7:DA17_D C 7 ? D 17 ? 20 1 1 A DG 8 1_555 B DC 16 1_555 -0.055 -0.205 -0.308 -0.345 6.469 0.180 8 C_DG8:DC16_D C 8 ? D 16 ? 19 1 1 A DA 9 1_555 B DT 15 1_555 0.232 -0.115 -0.238 -1.395 6.571 -0.616 9 C_DA9:DT15_D C 9 ? D 15 ? 20 1 1 A DG 10 1_555 B DC 14 1_555 -0.816 -0.225 -0.105 1.486 3.889 6.396 10 C_DG10:DC14_D C 10 ? D 14 ? 19 1 1 A DC 11 1_555 B DG 13 1_555 -0.126 -0.092 -0.211 -2.885 7.447 -5.233 11 C_DC11:DG13_D C 11 ? D 13 ? 19 1 1 A DG 12 1_555 B DC 12 1_555 -0.294 -0.260 -0.316 0.738 10.482 -7.950 12 C_DG12:DC12_D C 12 ? D 12 ? 19 1 1 A DG 13 1_555 B DC 11 1_555 -0.151 -0.079 -0.182 -0.579 6.890 4.532 13 C_DG13:DC11_D C 13 ? D 11 ? 19 1 1 A DA 14 1_555 B DT 10 1_555 -0.318 -0.131 -0.205 -3.756 10.646 -5.149 14 C_DA14:DT10_D C 14 ? D 10 ? 20 1 1 A DT 15 1_555 B DA 9 1_555 -0.252 -0.087 0.002 1.028 3.752 -8.185 15 C_DT15:DA9_D C 15 ? D 9 ? 20 1 1 A DA 16 1_555 B DT 8 1_555 0.051 -0.105 0.074 3.049 3.898 -8.769 16 C_DA16:DT8_D C 16 ? D 8 ? 20 1 1 A DA 17 1_555 B DT 7 1_555 0.003 -0.306 -0.402 -3.202 8.362 -4.543 17 C_DA17:DT7_D C 17 ? D 7 ? 20 1 1 A DC 18 1_555 B DG 6 1_555 -0.136 -0.175 0.032 -1.428 4.843 -1.285 18 C_DC18:DG6_D C 18 ? D 6 ? 19 1 1 A DA 19 1_555 B DT 5 1_555 0.208 -0.158 -0.175 -4.780 -0.849 -8.760 19 C_DA19:DT5_D C 19 ? D 5 ? 20 1 1 A DA 20 1_555 B DT 4 1_555 0.183 -0.154 -0.133 -1.132 2.500 0.835 20 C_DA20:DT4_D C 20 ? D 4 ? 20 1 1 A DT 21 1_555 B DA 3 1_555 -0.178 -0.149 -0.006 1.068 0.469 1.399 21 C_DT21:DA3_D C 21 ? D 3 ? 20 1 1 A DT 22 1_555 B DA 2 1_555 0.059 -0.266 -0.084 -0.323 -2.398 -1.278 22 C_DT22:DA2_D C 22 ? D 2 ? 20 1 1 A DT 23 1_555 B DA 1 1_555 -0.008 -0.196 -0.123 -0.012 1.000 -4.572 23 C_DT23:DA1_D C 23 ? D 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 23 1_555 A DA 2 1_555 B DT 22 1_555 -0.321 -0.218 3.067 -0.410 2.885 38.537 -0.661 0.439 3.046 4.364 0.620 38.642 1 CC_DG1DA2:DT22DC23_DD C 1 ? D 23 ? C 2 ? D 22 ? 1 A DA 2 1_555 B DT 22 1_555 A DA 3 1_555 B DT 21 1_555 -0.006 -0.221 3.096 -3.413 2.487 37.543 -0.645 -0.407 3.065 3.849 5.283 37.771 2 CC_DA2DA3:DT21DT22_DD C 2 ? D 22 ? C 3 ? D 21 ? 1 A DA 3 1_555 B DT 21 1_555 A DT 4 1_555 B DA 20 1_555 0.077 -0.575 3.048 -0.410 3.089 33.896 -1.438 -0.192 2.984 5.285 0.701 34.035 3 CC_DA3DT4:DA20DT21_DD C 3 ? D 21 ? C 4 ? D 20 ? 1 A DT 4 1_555 B DA 20 1_555 A DT 5 1_555 B DA 19 1_555 0.008 -0.438 3.161 4.118 10.584 31.956 -2.368 0.616 2.856 18.510 -7.201 33.865 4 CC_DT4DT5:DA19DA20_DD C 4 ? D 20 ? C 5 ? D 19 ? 1 A DT 5 1_555 B DA 19 1_555 A DG 6 1_555 B DC 18 1_555 0.602 -0.357 3.093 -1.588 8.793 35.173 -1.720 -1.174 2.895 14.268 2.577 36.256 5 CC_DT5DG6:DC18DA19_DD C 5 ? D 19 ? C 6 ? D 18 ? 1 A DG 6 1_555 B DC 18 1_555 A DT 7 1_555 B DA 17 1_555 -0.244 -0.359 3.257 1.247 -1.266 36.471 -0.398 0.561 3.258 -2.022 -1.991 36.512 6 CC_DG6DT7:DA17DC18_DD C 6 ? D 18 ? C 7 ? D 17 ? 1 A DT 7 1_555 B DA 17 1_555 A DG 8 1_555 B DC 16 1_555 0.098 -0.381 3.118 1.325 3.922 35.267 -1.169 0.023 3.061 6.446 -2.178 35.501 7 CC_DT7DG8:DC16DA17_DD C 7 ? D 17 ? C 8 ? D 16 ? 1 A DG 8 1_555 B DC 16 1_555 A DA 9 1_555 B DT 15 1_555 0.079 -0.447 3.250 -0.027 3.628 35.705 -1.239 -0.132 3.190 5.898 0.045 35.883 8 CC_DG8DA9:DT15DC16_DD C 8 ? D 16 ? C 9 ? D 15 ? 1 A DA 9 1_555 B DT 15 1_555 A DG 10 1_555 B DC 14 1_555 0.474 -0.428 3.333 -2.676 -2.368 31.802 -0.340 -1.352 3.305 -4.304 4.864 31.997 9 CC_DA9DG10:DC14DT15_DD C 9 ? D 15 ? C 10 ? D 14 ? 1 A DG 10 1_555 B DC 14 1_555 A DC 11 1_555 B DG 13 1_555 -0.886 -0.375 3.163 1.792 7.250 38.922 -1.361 1.507 3.006 10.759 -2.659 39.604 10 CC_DG10DC11:DG13DC14_DD C 10 ? D 14 ? C 11 ? D 13 ? 1 A DC 11 1_555 B DG 13 1_555 A DG 12 1_555 B DC 12 1_555 0.649 2.025 3.547 0.986 35.717 25.116 -2.278 -0.738 3.737 55.976 -1.545 43.438 11 CC_DC11DG12:DC12DG13_DD C 11 ? D 13 ? C 12 ? D 12 ? 1 A DG 12 1_555 B DC 12 1_555 A DG 13 1_555 B DC 11 1_555 0.908 -0.651 3.137 -5.387 12.371 31.791 -2.837 -2.289 2.534 21.418 9.327 34.467 12 CC_DG12DG13:DC11DC12_DD C 12 ? D 12 ? C 13 ? D 11 ? 1 A DG 13 1_555 B DC 11 1_555 A DA 14 1_555 B DT 10 1_555 -0.645 -0.591 3.535 0.085 7.430 33.326 -2.259 1.114 3.328 12.759 -0.146 34.122 13 CC_DG13DA14:DT10DC11_DD C 13 ? D 11 ? C 14 ? D 10 ? 1 A DA 14 1_555 B DT 10 1_555 A DT 15 1_555 B DA 9 1_555 -0.427 -0.261 3.382 -1.793 -6.778 34.653 0.617 0.427 3.388 -11.237 2.973 35.334 14 CC_DA14DT15:DA9DT10_DD C 14 ? D 10 ? C 15 ? D 9 ? 1 A DT 15 1_555 B DA 9 1_555 A DA 16 1_555 B DT 8 1_555 -0.249 -0.222 2.972 -1.340 14.492 34.595 -2.060 0.229 2.679 23.143 2.139 37.445 15 CC_DT15DA16:DT8DA9_DD C 15 ? D 9 ? C 16 ? D 8 ? 1 A DA 16 1_555 B DT 8 1_555 A DA 17 1_555 B DT 7 1_555 0.098 0.009 4.320 -2.525 -4.778 35.294 0.927 -0.642 4.266 -7.823 4.135 35.692 16 CC_DA16DA17:DT7DT8_DD C 16 ? D 8 ? C 17 ? D 7 ? 1 A DA 17 1_555 B DT 7 1_555 A DC 18 1_555 B DG 6 1_555 0.043 -0.271 3.228 -2.490 3.058 35.829 -0.864 -0.417 3.184 4.953 4.033 36.038 17 CC_DA17DC18:DG6DT7_DD C 17 ? D 7 ? C 18 ? D 6 ? 1 A DC 18 1_555 B DG 6 1_555 A DA 19 1_555 B DT 5 1_555 -0.605 0.241 3.236 3.660 12.379 36.865 -1.129 1.347 3.085 18.878 -5.581 38.985 18 CC_DC18DA19:DT5DG6_DD C 18 ? D 6 ? C 19 ? D 5 ? 1 A DA 19 1_555 B DT 5 1_555 A DA 20 1_555 B DT 4 1_555 0.244 0.048 3.525 -8.329 4.541 32.546 -0.701 -1.856 3.339 7.896 14.481 33.865 19 CC_DA19DA20:DT4DT5_DD C 19 ? D 5 ? C 20 ? D 4 ? 1 A DA 20 1_555 B DT 4 1_555 A DT 21 1_555 B DA 3 1_555 -0.066 -0.542 3.143 -0.976 3.065 32.666 -1.461 -0.042 3.082 5.433 1.730 32.820 20 CC_DA20DT21:DA3DT4_DD C 20 ? D 4 ? C 21 ? D 3 ? 1 A DT 21 1_555 B DA 3 1_555 A DT 22 1_555 B DA 2 1_555 -0.115 -0.157 3.086 2.165 -0.017 38.170 -0.238 0.433 3.075 -0.026 -3.307 38.229 21 CC_DT21DT22:DA2DA3_DD C 21 ? D 3 ? C 22 ? D 2 ? 1 A DT 22 1_555 B DA 2 1_555 A DT 23 1_555 B DA 1 1_555 0.080 -0.387 3.047 2.995 6.924 35.591 -1.510 0.256 2.920 11.174 -4.833 36.357 22 CC_DT22DT23:DA1DA2_DD C 22 ? D 2 ? C 23 ? D 1 ? #