data_1LXE # _entry.id 1LXE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1LXE RCSB RCSB016376 WWPDB D_1000016376 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1kwi _pdbx_database_related.details 'monomeric form' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LXE _pdbx_database_status.recvd_initial_deposition_date 2002-06-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sanchez, J.F.' 1 'Hoh, F.' 2 'Strub, M.P.' 3 'Aumelas, A.' 4 'Dumas, C.' 5 # _citation.id primary _citation.title ;Structure of the cathelicidin motif of protegrin-3 precursor: structural insights into the activation mechanism of an antimicrobial protein. ; _citation.journal_abbrev Structure _citation.journal_volume 10 _citation.page_first 1363 _citation.page_last 1370 _citation.year 2002 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12377122 _citation.pdbx_database_id_DOI '10.1016/S0969-2126(02)00859-6' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Sanchez, J.F.' 1 primary 'Hoh, F.' 2 primary 'Strub, M.P.' 3 primary 'Aumelas, A.' 4 primary 'Dumas, C.' 5 # _cell.entry_id 1LXE _cell.length_a 52.172 _cell.length_b 52.172 _cell.length_c 135.483 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LXE _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'protegrin-3 precursor' 11322.741 1 ? ? 'residues 30-130' ? 2 water nat water 18.015 45 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name pg-3 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QALSYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVG TVTLDQIKDPLDITCNEVQGV ; _entity_poly.pdbx_seq_one_letter_code_can ;QALSYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVG TVTLDQIKDPLDITCNEVQGV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ALA n 1 3 LEU n 1 4 SER n 1 5 TYR n 1 6 ARG n 1 7 GLU n 1 8 ALA n 1 9 VAL n 1 10 LEU n 1 11 ARG n 1 12 ALA n 1 13 VAL n 1 14 ASP n 1 15 ARG n 1 16 LEU n 1 17 ASN n 1 18 GLU n 1 19 GLN n 1 20 SER n 1 21 SER n 1 22 GLU n 1 23 ALA n 1 24 ASN n 1 25 LEU n 1 26 TYR n 1 27 ARG n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 LEU n 1 32 ASP n 1 33 GLN n 1 34 PRO n 1 35 PRO n 1 36 LYS n 1 37 ALA n 1 38 ASP n 1 39 GLU n 1 40 ASP n 1 41 PRO n 1 42 GLY n 1 43 THR n 1 44 PRO n 1 45 LYS n 1 46 PRO n 1 47 VAL n 1 48 SER n 1 49 PHE n 1 50 THR n 1 51 VAL n 1 52 LYS n 1 53 GLU n 1 54 THR n 1 55 VAL n 1 56 CYS n 1 57 PRO n 1 58 ARG n 1 59 PRO n 1 60 THR n 1 61 ARG n 1 62 GLN n 1 63 PRO n 1 64 PRO n 1 65 GLU n 1 66 LEU n 1 67 CYS n 1 68 ASP n 1 69 PHE n 1 70 LYS n 1 71 GLU n 1 72 ASN n 1 73 GLY n 1 74 ARG n 1 75 VAL n 1 76 LYS n 1 77 GLN n 1 78 CYS n 1 79 VAL n 1 80 GLY n 1 81 THR n 1 82 VAL n 1 83 THR n 1 84 LEU n 1 85 ASP n 1 86 GLN n 1 87 ILE n 1 88 LYS n 1 89 ASP n 1 90 PRO n 1 91 LEU n 1 92 ASP n 1 93 ILE n 1 94 THR n 1 95 CYS n 1 96 ASN n 1 97 GLU n 1 98 VAL n 1 99 GLN n 1 100 GLY n 1 101 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name pig _entity_src_gen.gene_src_genus Sus _entity_src_gen.pdbx_gene_src_gene pg3 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sus scrofa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9823 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PG3_PIG _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QALSYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTRQPPELCDFKENGRVKQCVG TVTLDQIKDPLDITCNEVQGV ; _struct_ref.pdbx_align_begin 30 _struct_ref.pdbx_db_accession P32196 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1LXE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 101 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P32196 _struct_ref_seq.db_align_beg 30 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 130 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 30 _struct_ref_seq.pdbx_auth_seq_align_end 130 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1LXE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.62 _exptl_crystal.density_Matthews 2.35 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 3.5 _exptl_crystal_grow.pdbx_details 'AMMONIUM SULFATE, SODIUM ACETATE, pH 3.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 291 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2002-01-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1LXE _reflns.observed_criterion_sigma_I 0. _reflns.observed_criterion_sigma_F 0. _reflns.d_resolution_low 27.1 _reflns.d_resolution_high 2.5 _reflns.number_obs 3922 _reflns.number_all 3922 _reflns.percent_possible_obs 91.3 _reflns.pdbx_Rmerge_I_obs 0.092 _reflns.pdbx_Rsym_value 0.092 _reflns.pdbx_netI_over_sigmaI 18.5 _reflns.B_iso_Wilson_estimate 43.8 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.5 _reflns_shell.d_res_low 2.66 _reflns_shell.percent_possible_all 91.3 _reflns_shell.Rmerge_I_obs 0.241 _reflns_shell.pdbx_Rsym_value 0.241 _reflns_shell.meanI_over_sigI_obs 4.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 541 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1LXE _refine.ls_number_reflns_obs 3922 _refine.ls_number_reflns_all 3922 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1799954.70 _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 27.10 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 93.3 _refine.ls_R_factor_obs 0.21501 _refine.ls_R_factor_all 0.21501 _refine.ls_R_factor_R_work 0.215 _refine.ls_R_factor_R_free 0.279 _refine.ls_R_factor_R_free_error 0.014 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.8 _refine.ls_number_reflns_R_free 386 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 33.6 _refine.aniso_B[1][1] 1.32 _refine.aniso_B[2][2] 1.32 _refine.aniso_B[3][3] -2.65 _refine.aniso_B[1][2] 7.71 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.429523 _refine.solvent_model_param_bsol 104.394 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1KWI' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF 1799954.70 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1LXE _refine_analyze.Luzzati_coordinate_error_obs 0.28 _refine_analyze.Luzzati_sigma_a_obs 0.23 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.36 _refine_analyze.Luzzati_sigma_a_free 0.26 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 722 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 45 _refine_hist.number_atoms_total 767 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 27.10 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.0 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.03 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 4.93 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 8.12 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 5.06 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 8.05 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.66 _refine_ls_shell.number_reflns_R_work 541 _refine_ls_shell.R_factor_R_work 0.231 _refine_ls_shell.percent_reflns_obs 91.3 _refine_ls_shell.R_factor_R_free 0.268 _refine_ls_shell.R_factor_R_free_error 0.033 _refine_ls_shell.percent_reflns_R_free 11.0 _refine_ls_shell.number_reflns_R_free 67 _refine_ls_shell.number_reflns_obs 541 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1LXE _struct.title 'CRYSTAL STRUCTURE OF THE CATHELICIDIN MOTIF OF PROTEGRINS' _struct.pdbx_descriptor 'PROTEGRIN 3 PRECURSOR' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LXE _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' _struct_keywords.text 'PROTEGRIN, CATHELICIDIN MOTIF, DISULFIDE, domain swapping, ANTIMICROBIAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ;The second part of the biological assembly is generated by the two fold axis: Rotation : 0.5000 0.8660 0.0 0.8660 -0.5000 0.0 0.0 0.0 -1.0 Translation : -26.086 45.183 -22.580 ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 2 ? GLN A 19 ? ALA A 31 GLN A 48 1 ? 18 HELX_P HELX_P2 2 PRO A 63 ? CYS A 67 ? PRO A 92 CYS A 96 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 56 SG ? ? ? 1_555 A CYS 67 SG ? ? A CYS 85 A CYS 96 1_555 ? ? ? ? ? ? ? 2.033 ? disulf2 disulf ? ? A CYS 78 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 107 A CYS 124 1_555 ? ? ? ? ? ? ? 2.035 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 45 ? LYS A 52 ? LYS A 74 LYS A 81 A 2 VAL A 75 ? VAL A 82 ? VAL A 104 VAL A 111 A 3 ILE A 93 ? GLU A 97 ? ILE A 122 GLU A 126 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 49 ? N PHE A 78 O CYS A 78 ? O CYS A 107 A 2 3 N GLN A 77 ? N GLN A 106 O ASN A 96 ? O ASN A 125 # _database_PDB_matrix.entry_id 1LXE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1LXE _atom_sites.fract_transf_matrix[1][1] 0.019167 _atom_sites.fract_transf_matrix[1][2] 0.011066 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022133 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007381 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 30 ? ? ? A . n A 1 2 ALA 2 31 31 ALA ALA A . n A 1 3 LEU 3 32 32 LEU LEU A . n A 1 4 SER 4 33 33 SER SER A . n A 1 5 TYR 5 34 34 TYR TYR A . n A 1 6 ARG 6 35 35 ARG ARG A . n A 1 7 GLU 7 36 36 GLU GLU A . n A 1 8 ALA 8 37 37 ALA ALA A . n A 1 9 VAL 9 38 38 VAL VAL A . n A 1 10 LEU 10 39 39 LEU LEU A . n A 1 11 ARG 11 40 40 ARG ARG A . n A 1 12 ALA 12 41 41 ALA ALA A . n A 1 13 VAL 13 42 42 VAL VAL A . n A 1 14 ASP 14 43 43 ASP ASP A . n A 1 15 ARG 15 44 44 ARG ARG A . n A 1 16 LEU 16 45 45 LEU LEU A . n A 1 17 ASN 17 46 46 ASN ASN A . n A 1 18 GLU 18 47 47 GLU GLU A . n A 1 19 GLN 19 48 48 GLN GLN A . n A 1 20 SER 20 49 49 SER SER A . n A 1 21 SER 21 50 50 SER SER A . n A 1 22 GLU 22 51 51 GLU GLU A . n A 1 23 ALA 23 52 52 ALA ALA A . n A 1 24 ASN 24 53 53 ASN ASN A . n A 1 25 LEU 25 54 54 LEU LEU A . n A 1 26 TYR 26 55 55 TYR TYR A . n A 1 27 ARG 27 56 56 ARG ARG A . n A 1 28 LEU 28 57 57 LEU LEU A . n A 1 29 LEU 29 58 58 LEU LEU A . n A 1 30 GLU 30 59 59 GLU GLU A . n A 1 31 LEU 31 60 60 LEU LEU A . n A 1 32 ASP 32 61 61 ASP ASP A . n A 1 33 GLN 33 62 62 GLN GLN A . n A 1 34 PRO 34 63 63 PRO PRO A . n A 1 35 PRO 35 64 64 PRO PRO A . n A 1 36 LYS 36 65 65 LYS LYS A . n A 1 37 ALA 37 66 66 ALA ALA A . n A 1 38 ASP 38 67 67 ASP ASP A . n A 1 39 GLU 39 68 68 GLU GLU A . n A 1 40 ASP 40 69 69 ASP ASP A . n A 1 41 PRO 41 70 70 PRO PRO A . n A 1 42 GLY 42 71 71 GLY GLY A . n A 1 43 THR 43 72 72 THR THR A . n A 1 44 PRO 44 73 73 PRO PRO A . n A 1 45 LYS 45 74 74 LYS LYS A . n A 1 46 PRO 46 75 75 PRO PRO A . n A 1 47 VAL 47 76 76 VAL VAL A . n A 1 48 SER 48 77 77 SER SER A . n A 1 49 PHE 49 78 78 PHE PHE A . n A 1 50 THR 50 79 79 THR THR A . n A 1 51 VAL 51 80 80 VAL VAL A . n A 1 52 LYS 52 81 81 LYS LYS A . n A 1 53 GLU 53 82 82 GLU GLU A . n A 1 54 THR 54 83 83 THR THR A . n A 1 55 VAL 55 84 84 VAL VAL A . n A 1 56 CYS 56 85 85 CYS CYS A . n A 1 57 PRO 57 86 86 PRO PRO A . n A 1 58 ARG 58 87 87 ARG ARG A . n A 1 59 PRO 59 88 88 PRO PRO A . n A 1 60 THR 60 89 89 THR THR A . n A 1 61 ARG 61 90 90 ARG ARG A . n A 1 62 GLN 62 91 91 GLN GLN A . n A 1 63 PRO 63 92 92 PRO PRO A . n A 1 64 PRO 64 93 93 PRO PRO A . n A 1 65 GLU 65 94 94 GLU GLU A . n A 1 66 LEU 66 95 95 LEU LEU A . n A 1 67 CYS 67 96 96 CYS CYS A . n A 1 68 ASP 68 97 97 ASP ASP A . n A 1 69 PHE 69 98 98 PHE PHE A . n A 1 70 LYS 70 99 99 LYS LYS A . n A 1 71 GLU 71 100 100 GLU GLU A . n A 1 72 ASN 72 101 101 ASN ASN A . n A 1 73 GLY 73 102 102 GLY GLY A . n A 1 74 ARG 74 103 103 ARG ARG A . n A 1 75 VAL 75 104 104 VAL VAL A . n A 1 76 LYS 76 105 105 LYS LYS A . n A 1 77 GLN 77 106 106 GLN GLN A . n A 1 78 CYS 78 107 107 CYS CYS A . n A 1 79 VAL 79 108 108 VAL VAL A . n A 1 80 GLY 80 109 109 GLY GLY A . n A 1 81 THR 81 110 110 THR THR A . n A 1 82 VAL 82 111 111 VAL VAL A . n A 1 83 THR 83 112 112 THR THR A . n A 1 84 LEU 84 113 113 LEU LEU A . n A 1 85 ASP 85 114 114 ASP ASP A . n A 1 86 GLN 86 115 ? ? ? A . n A 1 87 ILE 87 116 ? ? ? A . n A 1 88 LYS 88 117 ? ? ? A . n A 1 89 ASP 89 118 ? ? ? A . n A 1 90 PRO 90 119 ? ? ? A . n A 1 91 LEU 91 120 ? ? ? A . n A 1 92 ASP 92 121 121 ASP ASP A . n A 1 93 ILE 93 122 122 ILE ILE A . n A 1 94 THR 94 123 123 THR THR A . n A 1 95 CYS 95 124 124 CYS CYS A . n A 1 96 ASN 96 125 125 ASN ASN A . n A 1 97 GLU 97 126 126 GLU GLU A . n A 1 98 VAL 98 127 127 VAL VAL A . n A 1 99 GLN 99 128 128 GLN GLN A . n A 1 100 GLY 100 129 ? ? ? A . n A 1 101 VAL 101 130 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 131 101 HOH HOH A . B 2 HOH 2 132 102 HOH HOH A . B 2 HOH 3 133 103 HOH HOH A . B 2 HOH 4 134 104 HOH HOH A . B 2 HOH 5 135 105 HOH HOH A . B 2 HOH 6 136 106 HOH HOH A . B 2 HOH 7 137 107 HOH HOH A . B 2 HOH 8 138 108 HOH HOH A . B 2 HOH 9 139 109 HOH HOH A . B 2 HOH 10 140 110 HOH HOH A . B 2 HOH 11 141 111 HOH HOH A . B 2 HOH 12 142 112 HOH HOH A . B 2 HOH 13 143 113 HOH HOH A . B 2 HOH 14 144 114 HOH HOH A . B 2 HOH 15 145 115 HOH HOH A . B 2 HOH 16 146 116 HOH HOH A . B 2 HOH 17 147 117 HOH HOH A . B 2 HOH 18 148 118 HOH HOH A . B 2 HOH 19 149 119 HOH HOH A . B 2 HOH 20 150 120 HOH HOH A . B 2 HOH 21 151 121 HOH HOH A . B 2 HOH 22 152 122 HOH HOH A . B 2 HOH 23 153 123 HOH HOH A . B 2 HOH 24 154 124 HOH HOH A . B 2 HOH 25 155 125 HOH HOH A . B 2 HOH 26 156 126 HOH HOH A . B 2 HOH 27 157 127 HOH HOH A . B 2 HOH 28 158 128 HOH HOH A . B 2 HOH 29 159 129 HOH HOH A . B 2 HOH 30 160 130 HOH HOH A . B 2 HOH 31 161 131 HOH HOH A . B 2 HOH 32 162 132 HOH HOH A . B 2 HOH 33 163 133 HOH HOH A . B 2 HOH 34 164 134 HOH HOH A . B 2 HOH 35 165 135 HOH HOH A . B 2 HOH 36 166 136 HOH HOH A . B 2 HOH 37 167 137 HOH HOH A . B 2 HOH 38 168 138 HOH HOH A . B 2 HOH 39 169 139 HOH HOH A . B 2 HOH 40 170 140 HOH HOH A . B 2 HOH 41 171 141 HOH HOH A . B 2 HOH 42 172 142 HOH HOH A . B 2 HOH 43 173 143 HOH HOH A . B 2 HOH 44 174 144 HOH HOH A . B 2 HOH 45 175 145 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4890 ? 1 MORE -32 ? 1 'SSA (A^2)' 12850 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5000000000 0.8660254038 0.0000000000 -26.0860000000 0.8660254038 -0.5000000000 0.0000000000 45.1822773662 0.0000000000 0.0000000000 -1.0000000000 -22.5805000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-10-09 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 AUTOMAR 'data reduction' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 63 ? ? -52.26 106.70 2 1 ASP A 69 ? ? 71.98 57.65 3 1 PRO A 70 ? ? -72.76 -125.66 4 1 GLU A 100 ? ? -38.79 -82.19 5 1 ASN A 101 ? ? -103.30 57.49 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 30 ? A GLN 1 2 1 Y 1 A GLN 115 ? A GLN 86 3 1 Y 1 A ILE 116 ? A ILE 87 4 1 Y 1 A LYS 117 ? A LYS 88 5 1 Y 1 A ASP 118 ? A ASP 89 6 1 Y 1 A PRO 119 ? A PRO 90 7 1 Y 1 A LEU 120 ? A LEU 91 8 1 Y 1 A GLY 129 ? A GLY 100 9 1 Y 1 A VAL 130 ? A VAL 101 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #