data_1NAE # _entry.id 1NAE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1NAE pdb_00001nae 10.2210/pdb1nae/pdb RCSB RCSB017716 ? ? WWPDB D_1000017716 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NAE _pdbx_database_status.recvd_initial_deposition_date 2002-11-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Boraston, A.B.' 1 'Notenboom, V.' 2 'Warren, R.A.J.' 3 'Kilburn, D.G.' 4 'Rose, D.R.' 5 'Davies, G.' 6 # _citation.id primary _citation.title ;Structure and ligand binding of carbohydrate-binding module CsCBM6-3 reveals similarities with fucose-specific lectins and "galactose-binding" domains ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 327 _citation.page_first 659 _citation.page_last 669 _citation.year 2003 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12634060 _citation.pdbx_database_id_DOI '10.1016/S0022-2836(03)00152-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Boraston, A.B.' 1 ? primary 'Notenboom, V.' 2 ? primary 'Warren, R.A.J.' 3 ? primary 'Kilburn, D.G.' 4 ? primary 'Rose, D.R.' 5 ? primary 'Davies, G.' 6 ? # _cell.entry_id 1NAE _cell.length_a 29.648 _cell.length_b 49.746 _cell.length_c 36.082 _cell.angle_alpha 90.00 _cell.angle_beta 93.18 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NAE _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'putative xylanase' 17405.947 1 ? ? 'C-terminal carbohydrate-binding module' ? 2 branched man 'beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose' 414.360 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 water nat water 18.015 178 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 4beta-beta-xylotriose # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MGSSHHHHHHSSGLVPRGSHMASTPANVNSGPTSPVGGTRSAFSNIQAEDYDSSYGPNLQIFSLPGGGSAIGYIENGYST TYKNIDFGDGATSVTARVATQNATTIQVRLGSPSGTLLGTIYVGSTGSFDTYRDVSATISNTAGVKDIVLVFSGPVNVDW FVFSKSGT ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSSHHHHHHSSGLVPRGSHMASTPANVNSGPTSPVGGTRSAFSNIQAEDYDSSYGPNLQIFSLPGGGSAIGYIENGYST TYKNIDFGDGATSVTARVATQNATTIQVRLGSPSGTLLGTIYVGSTGSFDTYRDVSATISNTAGVKDIVLVFSGPVNVDW FVFSKSGT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 ALA n 1 23 SER n 1 24 THR n 1 25 PRO n 1 26 ALA n 1 27 ASN n 1 28 VAL n 1 29 ASN n 1 30 SER n 1 31 GLY n 1 32 PRO n 1 33 THR n 1 34 SER n 1 35 PRO n 1 36 VAL n 1 37 GLY n 1 38 GLY n 1 39 THR n 1 40 ARG n 1 41 SER n 1 42 ALA n 1 43 PHE n 1 44 SER n 1 45 ASN n 1 46 ILE n 1 47 GLN n 1 48 ALA n 1 49 GLU n 1 50 ASP n 1 51 TYR n 1 52 ASP n 1 53 SER n 1 54 SER n 1 55 TYR n 1 56 GLY n 1 57 PRO n 1 58 ASN n 1 59 LEU n 1 60 GLN n 1 61 ILE n 1 62 PHE n 1 63 SER n 1 64 LEU n 1 65 PRO n 1 66 GLY n 1 67 GLY n 1 68 GLY n 1 69 SER n 1 70 ALA n 1 71 ILE n 1 72 GLY n 1 73 TYR n 1 74 ILE n 1 75 GLU n 1 76 ASN n 1 77 GLY n 1 78 TYR n 1 79 SER n 1 80 THR n 1 81 THR n 1 82 TYR n 1 83 LYS n 1 84 ASN n 1 85 ILE n 1 86 ASP n 1 87 PHE n 1 88 GLY n 1 89 ASP n 1 90 GLY n 1 91 ALA n 1 92 THR n 1 93 SER n 1 94 VAL n 1 95 THR n 1 96 ALA n 1 97 ARG n 1 98 VAL n 1 99 ALA n 1 100 THR n 1 101 GLN n 1 102 ASN n 1 103 ALA n 1 104 THR n 1 105 THR n 1 106 ILE n 1 107 GLN n 1 108 VAL n 1 109 ARG n 1 110 LEU n 1 111 GLY n 1 112 SER n 1 113 PRO n 1 114 SER n 1 115 GLY n 1 116 THR n 1 117 LEU n 1 118 LEU n 1 119 GLY n 1 120 THR n 1 121 ILE n 1 122 TYR n 1 123 VAL n 1 124 GLY n 1 125 SER n 1 126 THR n 1 127 GLY n 1 128 SER n 1 129 PHE n 1 130 ASP n 1 131 THR n 1 132 TYR n 1 133 ARG n 1 134 ASP n 1 135 VAL n 1 136 SER n 1 137 ALA n 1 138 THR n 1 139 ILE n 1 140 SER n 1 141 ASN n 1 142 THR n 1 143 ALA n 1 144 GLY n 1 145 VAL n 1 146 LYS n 1 147 ASP n 1 148 ILE n 1 149 VAL n 1 150 LEU n 1 151 VAL n 1 152 PHE n 1 153 SER n 1 154 GLY n 1 155 PRO n 1 156 VAL n 1 157 ASN n 1 158 VAL n 1 159 ASP n 1 160 TRP n 1 161 PHE n 1 162 VAL n 1 163 PHE n 1 164 SER n 1 165 LYS n 1 166 SER n 1 167 GLY n 1 168 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Clostridium _entity_src_gen.pdbx_gene_src_gene 'putative xylanase' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium stercorarium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1510 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21/DE3 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AAL14106 _struct_ref.pdbx_db_accession 16076818 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TPANVNSGPTSPVGGTRSAFSNIQAEDYDSSYGPNLQIFSLPGGGSAIGYIENGYSTTYKNIDFGDGATSVTARVATQNA TTIQVRLGSPSGTLLGTIYVGSTGSFDTYRDVSATISNTAGVKDIVLVFSGPVNVDWFVFSKSGT ; _struct_ref.pdbx_align_begin 273 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1NAE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 24 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 168 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 16076818 _struct_ref_seq.db_align_beg 273 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 417 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 7 _struct_ref_seq.pdbx_auth_seq_align_end 151 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1NAE MET A 1 ? GB 16076818 ? ? 'expression tag' -16 1 1 1NAE GLY A 2 ? GB 16076818 ? ? 'expression tag' -15 2 1 1NAE SER A 3 ? GB 16076818 ? ? 'expression tag' -14 3 1 1NAE SER A 4 ? GB 16076818 ? ? 'expression tag' -13 4 1 1NAE HIS A 5 ? GB 16076818 ? ? 'expression tag' -12 5 1 1NAE HIS A 6 ? GB 16076818 ? ? 'expression tag' -11 6 1 1NAE HIS A 7 ? GB 16076818 ? ? 'expression tag' -10 7 1 1NAE HIS A 8 ? GB 16076818 ? ? 'expression tag' -9 8 1 1NAE HIS A 9 ? GB 16076818 ? ? 'expression tag' -8 9 1 1NAE HIS A 10 ? GB 16076818 ? ? 'expression tag' -7 10 1 1NAE SER A 11 ? GB 16076818 ? ? 'expression tag' -6 11 1 1NAE SER A 12 ? GB 16076818 ? ? 'expression tag' -5 12 1 1NAE GLY A 13 ? GB 16076818 ? ? 'expression tag' -4 13 1 1NAE LEU A 14 ? GB 16076818 ? ? 'expression tag' -3 14 1 1NAE VAL A 15 ? GB 16076818 ? ? 'expression tag' -2 15 1 1NAE PRO A 16 ? GB 16076818 ? ? 'expression tag' -1 16 1 1NAE ARG A 17 ? GB 16076818 ? ? 'expression tag' 0 17 1 1NAE GLY A 18 ? GB 16076818 ? ? 'expression tag' 1 18 1 1NAE SER A 19 ? GB 16076818 ? ? 'expression tag' 2 19 1 1NAE HIS A 20 ? GB 16076818 ? ? 'expression tag' 3 20 1 1NAE MET A 21 ? GB 16076818 ? ? 'expression tag' 4 21 1 1NAE ALA A 22 ? GB 16076818 ? ? 'expression tag' 5 22 1 1NAE SER A 23 ? GB 16076818 ? ? 'expression tag' 6 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 XYP 'D-saccharide, beta linking' . beta-D-xylopyranose 'beta-D-xylose; D-xylose; xylose' 'C5 H10 O5' 150.130 # _exptl.entry_id 1NAE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.63 _exptl_crystal.density_percent_sol 24.09 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '26%PEG 4K, 0.1 M sodium acetate, pH 4.6, 0.2 M ammonium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2002-07-12 _diffrn_detector.details 'long mirror focused' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 # _reflns.entry_id 1NAE _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.05 _reflns.d_resolution_low 36.04 _reflns.number_all 6680 _reflns.number_obs 6382 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value 0.07 _reflns.pdbx_netI_over_sigmaI 12.4 _reflns.B_iso_Wilson_estimate 20.33 _reflns.pdbx_redundancy 2.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.12 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.186 _reflns_shell.pdbx_Rsym_value 0.186 _reflns_shell.meanI_over_sigI_obs 5.4 _reflns_shell.pdbx_redundancy 2.2 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 649 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1NAE _refine.ls_number_reflns_obs 5544 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 36.04 _refine.ls_d_res_high 2.05 _refine.ls_percent_reflns_obs 87.34 _refine.ls_R_factor_obs 0.13748 _refine.ls_R_factor_all 0.13748 _refine.ls_R_factor_R_work 0.1345 _refine.ls_R_factor_R_free 0.19487 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 279 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.970 _refine.correlation_coeff_Fo_to_Fc_free 0.946 _refine.B_iso_mean 19.907 _refine.aniso_B[1][1] 0.87 _refine.aniso_B[2][2] -0.04 _refine.aniso_B[3][3] -0.84 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.10 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1gmm _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free 0.194 _refine.overall_SU_B 4.630 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML 0.126 _refine.pdbx_overall_ESU_R 0.334 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 952 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 181 _refine_hist.number_atoms_total 1162 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 36.04 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.021 ? 1001 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.528 1.966 ? 1367 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.150 5.000 ? 128 'X-RAY DIFFRACTION' ? r_chiral_restr 0.103 0.200 ? 164 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 747 'X-RAY DIFFRACTION' ? r_nbd_refined 0.210 0.200 ? 443 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.144 0.200 ? 141 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.099 0.200 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.223 0.200 ? 43 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.214 0.200 ? 31 'X-RAY DIFFRACTION' ? r_mcbond_it 0.771 1.500 ? 631 'X-RAY DIFFRACTION' ? r_mcangle_it 1.353 2.000 ? 1015 'X-RAY DIFFRACTION' ? r_scbond_it 2.276 3.000 ? 370 'X-RAY DIFFRACTION' ? r_scangle_it 3.132 4.500 ? 352 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.050 _refine_ls_shell.d_res_low 2.103 _refine_ls_shell.number_reflns_R_work 416 _refine_ls_shell.R_factor_R_work 0.167 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.295 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 28 _refine_ls_shell.number_reflns_obs 648 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1NAE _struct.title 'Structure of CsCBM6-3 from Clostridium stercorarium in complex with xylotriose' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NAE _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'carbohydrate-binding module, beta-sandwich, xylan, xylooligosaccharide, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B XYP . O4 ? ? ? 1_555 B XYP . C1 ? ? B XYP 1 B XYP 2 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale2 covale both ? B XYP . O4 ? ? ? 1_555 B XYP . C1 ? ? B XYP 2 B XYP 3 1_555 ? ? ? ? ? ? ? 1.438 ? ? metalc1 metalc ? ? A GLN 47 OE1 ? ? ? 1_555 C CA . CA ? ? A GLN 30 A CA 900 1_555 ? ? ? ? ? ? ? 2.249 ? ? metalc2 metalc ? ? A GLU 49 OE1 ? ? ? 1_555 C CA . CA ? ? A GLU 32 A CA 900 1_555 ? ? ? ? ? ? ? 2.515 ? ? metalc3 metalc ? ? A GLU 49 OE2 ? ? ? 1_555 C CA . CA ? ? A GLU 32 A CA 900 1_555 ? ? ? ? ? ? ? 2.830 ? ? metalc4 metalc ? ? A SER 69 O ? ? ? 1_555 C CA . CA ? ? A SER 52 A CA 900 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc5 metalc ? ? A ASP 159 OD1 ? ? ? 1_555 C CA . CA ? ? A ASP 142 A CA 900 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc6 metalc ? ? A ASP 159 O ? ? ? 1_555 C CA . CA ? ? A ASP 142 A CA 900 1_555 ? ? ? ? ? ? ? 2.385 ? ? metalc7 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 900 A HOH 992 1_555 ? ? ? ? ? ? ? 2.965 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 4 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 117 ? VAL A 123 ? LEU A 100 VAL A 106 A 2 THR A 104 ? LEU A 110 ? THR A 87 LEU A 93 A 3 VAL A 145 ? PHE A 152 ? VAL A 128 PHE A 135 A 4 SER A 79 ? ASP A 86 ? SER A 62 ASP A 69 A 5 ARG A 40 ? SER A 41 ? ARG A 23 SER A 24 B 1 LEU A 117 ? VAL A 123 ? LEU A 100 VAL A 106 B 2 THR A 104 ? LEU A 110 ? THR A 87 LEU A 93 B 3 VAL A 145 ? PHE A 152 ? VAL A 128 PHE A 135 B 4 SER A 79 ? ASP A 86 ? SER A 62 ASP A 69 B 5 SER A 53 ? TYR A 55 ? SER A 36 TYR A 38 C 1 ILE A 46 ? GLN A 47 ? ILE A 29 GLN A 30 C 2 ASN A 157 ? SER A 164 ? ASN A 140 SER A 147 C 3 ALA A 91 ? ALA A 99 ? ALA A 74 ALA A 82 C 4 ARG A 133 ? THR A 142 ? ARG A 116 THR A 125 D 1 GLN A 60 ? SER A 63 ? GLN A 43 SER A 46 D 2 SER A 69 ? GLY A 72 ? SER A 52 GLY A 55 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 121 ? O ILE A 104 N ILE A 106 ? N ILE A 89 A 2 3 N ARG A 109 ? N ARG A 92 O VAL A 149 ? O VAL A 132 A 3 4 O LYS A 146 ? O LYS A 129 N ILE A 85 ? N ILE A 68 A 4 5 O ASP A 86 ? O ASP A 69 N ARG A 40 ? N ARG A 23 B 1 2 O ILE A 121 ? O ILE A 104 N ILE A 106 ? N ILE A 89 B 2 3 N ARG A 109 ? N ARG A 92 O VAL A 149 ? O VAL A 132 B 3 4 O LYS A 146 ? O LYS A 129 N ILE A 85 ? N ILE A 68 B 4 5 O THR A 81 ? O THR A 64 N SER A 53 ? N SER A 36 C 1 2 N ILE A 46 ? N ILE A 29 O PHE A 161 ? O PHE A 144 C 2 3 O TRP A 160 ? O TRP A 143 N ARG A 97 ? N ARG A 80 C 3 4 N ALA A 96 ? N ALA A 79 O VAL A 135 ? O VAL A 118 D 1 2 N GLN A 60 ? N GLN A 43 O GLY A 72 ? O GLY A 55 # _database_PDB_matrix.entry_id 1NAE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NAE _atom_sites.fract_transf_matrix[1][1] 0.033729 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001874 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020102 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027757 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -16 ? ? ? A . n A 1 2 GLY 2 -15 ? ? ? A . n A 1 3 SER 3 -14 ? ? ? A . n A 1 4 SER 4 -13 ? ? ? A . n A 1 5 HIS 5 -12 ? ? ? A . n A 1 6 HIS 6 -11 ? ? ? A . n A 1 7 HIS 7 -10 ? ? ? A . n A 1 8 HIS 8 -9 ? ? ? A . n A 1 9 HIS 9 -8 ? ? ? A . n A 1 10 HIS 10 -7 ? ? ? A . n A 1 11 SER 11 -6 ? ? ? A . n A 1 12 SER 12 -5 ? ? ? A . n A 1 13 GLY 13 -4 ? ? ? A . n A 1 14 LEU 14 -3 ? ? ? A . n A 1 15 VAL 15 -2 ? ? ? A . n A 1 16 PRO 16 -1 ? ? ? A . n A 1 17 ARG 17 0 ? ? ? A . n A 1 18 GLY 18 1 ? ? ? A . n A 1 19 SER 19 2 ? ? ? A . n A 1 20 HIS 20 3 ? ? ? A . n A 1 21 MET 21 4 ? ? ? A . n A 1 22 ALA 22 5 ? ? ? A . n A 1 23 SER 23 6 ? ? ? A . n A 1 24 THR 24 7 ? ? ? A . n A 1 25 PRO 25 8 ? ? ? A . n A 1 26 ALA 26 9 ? ? ? A . n A 1 27 ASN 27 10 ? ? ? A . n A 1 28 VAL 28 11 ? ? ? A . n A 1 29 ASN 29 12 ? ? ? A . n A 1 30 SER 30 13 ? ? ? A . n A 1 31 GLY 31 14 ? ? ? A . n A 1 32 PRO 32 15 ? ? ? A . n A 1 33 THR 33 16 ? ? ? A . n A 1 34 SER 34 17 ? ? ? A . n A 1 35 PRO 35 18 ? ? ? A . n A 1 36 VAL 36 19 ? ? ? A . n A 1 37 GLY 37 20 20 GLY GLY A . n A 1 38 GLY 38 21 21 GLY GLY A . n A 1 39 THR 39 22 22 THR THR A . n A 1 40 ARG 40 23 23 ARG ARG A . n A 1 41 SER 41 24 24 SER SER A . n A 1 42 ALA 42 25 25 ALA ALA A . n A 1 43 PHE 43 26 26 PHE PHE A . n A 1 44 SER 44 27 27 SER SER A . n A 1 45 ASN 45 28 28 ASN ASN A . n A 1 46 ILE 46 29 29 ILE ILE A . n A 1 47 GLN 47 30 30 GLN GLN A . n A 1 48 ALA 48 31 31 ALA ALA A . n A 1 49 GLU 49 32 32 GLU GLU A . n A 1 50 ASP 50 33 33 ASP ASP A . n A 1 51 TYR 51 34 34 TYR TYR A . n A 1 52 ASP 52 35 35 ASP ASP A . n A 1 53 SER 53 36 36 SER SER A . n A 1 54 SER 54 37 37 SER SER A . n A 1 55 TYR 55 38 38 TYR TYR A . n A 1 56 GLY 56 39 39 GLY GLY A . n A 1 57 PRO 57 40 40 PRO PRO A . n A 1 58 ASN 58 41 41 ASN ASN A . n A 1 59 LEU 59 42 42 LEU LEU A . n A 1 60 GLN 60 43 43 GLN GLN A . n A 1 61 ILE 61 44 44 ILE ILE A . n A 1 62 PHE 62 45 45 PHE PHE A . n A 1 63 SER 63 46 46 SER SER A . n A 1 64 LEU 64 47 47 LEU LEU A . n A 1 65 PRO 65 48 48 PRO PRO A . n A 1 66 GLY 66 49 49 GLY GLY A . n A 1 67 GLY 67 50 50 GLY GLY A . n A 1 68 GLY 68 51 51 GLY GLY A . n A 1 69 SER 69 52 52 SER SER A . n A 1 70 ALA 70 53 53 ALA ALA A . n A 1 71 ILE 71 54 54 ILE ILE A . n A 1 72 GLY 72 55 55 GLY GLY A . n A 1 73 TYR 73 56 56 TYR TYR A . n A 1 74 ILE 74 57 57 ILE ILE A . n A 1 75 GLU 75 58 58 GLU GLU A . n A 1 76 ASN 76 59 59 ASN ASN A . n A 1 77 GLY 77 60 60 GLY GLY A . n A 1 78 TYR 78 61 61 TYR TYR A . n A 1 79 SER 79 62 62 SER SER A . n A 1 80 THR 80 63 63 THR THR A . n A 1 81 THR 81 64 64 THR THR A . n A 1 82 TYR 82 65 65 TYR TYR A . n A 1 83 LYS 83 66 66 LYS LYS A . n A 1 84 ASN 84 67 67 ASN ASN A . n A 1 85 ILE 85 68 68 ILE ILE A . n A 1 86 ASP 86 69 69 ASP ASP A . n A 1 87 PHE 87 70 70 PHE PHE A . n A 1 88 GLY 88 71 71 GLY GLY A . n A 1 89 ASP 89 72 72 ASP ASP A . n A 1 90 GLY 90 73 73 GLY GLY A . n A 1 91 ALA 91 74 74 ALA ALA A . n A 1 92 THR 92 75 75 THR THR A . n A 1 93 SER 93 76 76 SER SER A . n A 1 94 VAL 94 77 77 VAL VAL A . n A 1 95 THR 95 78 78 THR THR A . n A 1 96 ALA 96 79 79 ALA ALA A . n A 1 97 ARG 97 80 80 ARG ARG A . n A 1 98 VAL 98 81 81 VAL VAL A . n A 1 99 ALA 99 82 82 ALA ALA A . n A 1 100 THR 100 83 83 THR THR A . n A 1 101 GLN 101 84 84 GLN GLN A . n A 1 102 ASN 102 85 85 ASN ASN A . n A 1 103 ALA 103 86 86 ALA ALA A . n A 1 104 THR 104 87 87 THR THR A . n A 1 105 THR 105 88 88 THR THR A . n A 1 106 ILE 106 89 89 ILE ILE A . n A 1 107 GLN 107 90 90 GLN GLN A . n A 1 108 VAL 108 91 91 VAL VAL A . n A 1 109 ARG 109 92 92 ARG ARG A . n A 1 110 LEU 110 93 93 LEU LEU A . n A 1 111 GLY 111 94 94 GLY GLY A . n A 1 112 SER 112 95 95 SER SER A . n A 1 113 PRO 113 96 96 PRO PRO A . n A 1 114 SER 114 97 97 SER SER A . n A 1 115 GLY 115 98 98 GLY GLY A . n A 1 116 THR 116 99 99 THR THR A . n A 1 117 LEU 117 100 100 LEU LEU A . n A 1 118 LEU 118 101 101 LEU LEU A . n A 1 119 GLY 119 102 102 GLY GLY A . n A 1 120 THR 120 103 103 THR THR A . n A 1 121 ILE 121 104 104 ILE ILE A . n A 1 122 TYR 122 105 105 TYR TYR A . n A 1 123 VAL 123 106 106 VAL VAL A . n A 1 124 GLY 124 107 107 GLY GLY A . n A 1 125 SER 125 108 108 SER SER A . n A 1 126 THR 126 109 109 THR THR A . n A 1 127 GLY 127 110 110 GLY GLY A . n A 1 128 SER 128 111 111 SER SER A . n A 1 129 PHE 129 112 112 PHE PHE A . n A 1 130 ASP 130 113 113 ASP ASP A . n A 1 131 THR 131 114 114 THR THR A . n A 1 132 TYR 132 115 115 TYR TYR A . n A 1 133 ARG 133 116 116 ARG ARG A . n A 1 134 ASP 134 117 117 ASP ASP A . n A 1 135 VAL 135 118 118 VAL VAL A . n A 1 136 SER 136 119 119 SER SER A . n A 1 137 ALA 137 120 120 ALA ALA A . n A 1 138 THR 138 121 121 THR THR A . n A 1 139 ILE 139 122 122 ILE ILE A . n A 1 140 SER 140 123 123 SER SER A . n A 1 141 ASN 141 124 124 ASN ASN A . n A 1 142 THR 142 125 125 THR THR A . n A 1 143 ALA 143 126 126 ALA ALA A . n A 1 144 GLY 144 127 127 GLY GLY A . n A 1 145 VAL 145 128 128 VAL VAL A . n A 1 146 LYS 146 129 129 LYS LYS A . n A 1 147 ASP 147 130 130 ASP ASP A . n A 1 148 ILE 148 131 131 ILE ILE A . n A 1 149 VAL 149 132 132 VAL VAL A . n A 1 150 LEU 150 133 133 LEU LEU A . n A 1 151 VAL 151 134 134 VAL VAL A . n A 1 152 PHE 152 135 135 PHE PHE A . n A 1 153 SER 153 136 136 SER SER A . n A 1 154 GLY 154 137 137 GLY GLY A . n A 1 155 PRO 155 138 138 PRO PRO A . n A 1 156 VAL 156 139 139 VAL VAL A . n A 1 157 ASN 157 140 140 ASN ASN A . n A 1 158 VAL 158 141 141 VAL VAL A . n A 1 159 ASP 159 142 142 ASP ASP A . n A 1 160 TRP 160 143 143 TRP TRP A . n A 1 161 PHE 161 144 144 PHE PHE A . n A 1 162 VAL 162 145 145 VAL VAL A . n A 1 163 PHE 163 146 146 PHE PHE A . n A 1 164 SER 164 147 147 SER SER A . n A 1 165 LYS 165 148 148 LYS LYS A . n A 1 166 SER 166 149 ? ? ? A . n A 1 167 GLY 167 150 ? ? ? A . n A 1 168 THR 168 151 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA 1 900 900 CA CA A . D 4 HOH 1 901 1 HOH HOH A . D 4 HOH 2 902 2 HOH HOH A . D 4 HOH 3 903 3 HOH HOH A . D 4 HOH 4 904 4 HOH HOH A . D 4 HOH 5 905 5 HOH HOH A . D 4 HOH 6 906 6 HOH HOH A . D 4 HOH 7 907 7 HOH HOH A . D 4 HOH 8 908 8 HOH HOH A . D 4 HOH 9 909 9 HOH HOH A . D 4 HOH 10 910 10 HOH HOH A . D 4 HOH 11 911 11 HOH HOH A . D 4 HOH 12 912 12 HOH HOH A . D 4 HOH 13 913 13 HOH HOH A . D 4 HOH 14 914 14 HOH HOH A . D 4 HOH 15 915 15 HOH HOH A . D 4 HOH 16 916 16 HOH HOH A . D 4 HOH 17 917 17 HOH HOH A . D 4 HOH 18 918 18 HOH HOH A . D 4 HOH 19 919 19 HOH HOH A . D 4 HOH 20 920 20 HOH HOH A . D 4 HOH 21 921 21 HOH HOH A . D 4 HOH 22 922 22 HOH HOH A . D 4 HOH 23 923 23 HOH HOH A . D 4 HOH 24 924 24 HOH HOH A . D 4 HOH 25 925 25 HOH HOH A . D 4 HOH 26 926 26 HOH HOH A . D 4 HOH 27 927 27 HOH HOH A . D 4 HOH 28 928 28 HOH HOH A . D 4 HOH 29 929 29 HOH HOH A . D 4 HOH 30 930 30 HOH HOH A . D 4 HOH 31 931 31 HOH HOH A . D 4 HOH 32 932 32 HOH HOH A . D 4 HOH 33 933 33 HOH HOH A . D 4 HOH 34 934 34 HOH HOH A . D 4 HOH 35 935 35 HOH HOH A . D 4 HOH 36 936 36 HOH HOH A . D 4 HOH 37 937 37 HOH HOH A . D 4 HOH 38 938 38 HOH HOH A . D 4 HOH 39 939 39 HOH HOH A . D 4 HOH 40 940 40 HOH HOH A . D 4 HOH 41 941 41 HOH HOH A . D 4 HOH 42 942 42 HOH HOH A . D 4 HOH 43 943 43 HOH HOH A . D 4 HOH 44 944 44 HOH HOH A . D 4 HOH 45 945 45 HOH HOH A . D 4 HOH 46 946 46 HOH HOH A . D 4 HOH 47 947 47 HOH HOH A . D 4 HOH 48 948 48 HOH HOH A . D 4 HOH 49 949 49 HOH HOH A . D 4 HOH 50 950 50 HOH HOH A . D 4 HOH 51 951 51 HOH HOH A . D 4 HOH 52 952 52 HOH HOH A . D 4 HOH 53 953 54 HOH HOH A . D 4 HOH 54 954 55 HOH HOH A . D 4 HOH 55 955 56 HOH HOH A . D 4 HOH 56 956 57 HOH HOH A . D 4 HOH 57 957 58 HOH HOH A . D 4 HOH 58 958 59 HOH HOH A . D 4 HOH 59 959 60 HOH HOH A . D 4 HOH 60 960 61 HOH HOH A . D 4 HOH 61 961 62 HOH HOH A . D 4 HOH 62 962 63 HOH HOH A . D 4 HOH 63 963 64 HOH HOH A . D 4 HOH 64 964 65 HOH HOH A . D 4 HOH 65 965 66 HOH HOH A . D 4 HOH 66 966 67 HOH HOH A . D 4 HOH 67 967 68 HOH HOH A . D 4 HOH 68 968 69 HOH HOH A . D 4 HOH 69 969 70 HOH HOH A . D 4 HOH 70 970 71 HOH HOH A . D 4 HOH 71 971 72 HOH HOH A . D 4 HOH 72 972 73 HOH HOH A . D 4 HOH 73 973 75 HOH HOH A . D 4 HOH 74 974 76 HOH HOH A . D 4 HOH 75 975 77 HOH HOH A . D 4 HOH 76 976 78 HOH HOH A . D 4 HOH 77 977 79 HOH HOH A . D 4 HOH 78 978 80 HOH HOH A . D 4 HOH 79 979 81 HOH HOH A . D 4 HOH 80 980 82 HOH HOH A . D 4 HOH 81 981 83 HOH HOH A . D 4 HOH 82 982 84 HOH HOH A . D 4 HOH 83 983 85 HOH HOH A . D 4 HOH 84 984 86 HOH HOH A . D 4 HOH 85 985 87 HOH HOH A . D 4 HOH 86 986 88 HOH HOH A . D 4 HOH 87 987 89 HOH HOH A . D 4 HOH 88 988 90 HOH HOH A . D 4 HOH 89 989 91 HOH HOH A . D 4 HOH 90 990 92 HOH HOH A . D 4 HOH 91 991 93 HOH HOH A . D 4 HOH 92 992 94 HOH HOH A . D 4 HOH 93 993 95 HOH HOH A . D 4 HOH 94 994 96 HOH HOH A . D 4 HOH 95 995 97 HOH HOH A . D 4 HOH 96 996 98 HOH HOH A . D 4 HOH 97 997 99 HOH HOH A . D 4 HOH 98 998 100 HOH HOH A . D 4 HOH 99 999 101 HOH HOH A . D 4 HOH 100 1000 103 HOH HOH A . D 4 HOH 101 1001 104 HOH HOH A . D 4 HOH 102 1002 105 HOH HOH A . D 4 HOH 103 1003 106 HOH HOH A . D 4 HOH 104 1004 107 HOH HOH A . D 4 HOH 105 1005 110 HOH HOH A . D 4 HOH 106 1006 111 HOH HOH A . D 4 HOH 107 1007 112 HOH HOH A . D 4 HOH 108 1008 113 HOH HOH A . D 4 HOH 109 1009 114 HOH HOH A . D 4 HOH 110 1010 115 HOH HOH A . D 4 HOH 111 1011 116 HOH HOH A . D 4 HOH 112 1012 117 HOH HOH A . D 4 HOH 113 1013 118 HOH HOH A . D 4 HOH 114 1014 119 HOH HOH A . D 4 HOH 115 1015 120 HOH HOH A . D 4 HOH 116 1016 121 HOH HOH A . D 4 HOH 117 1017 122 HOH HOH A . D 4 HOH 118 1018 123 HOH HOH A . D 4 HOH 119 1019 126 HOH HOH A . D 4 HOH 120 1020 127 HOH HOH A . D 4 HOH 121 1021 128 HOH HOH A . D 4 HOH 122 1022 129 HOH HOH A . D 4 HOH 123 1023 130 HOH HOH A . D 4 HOH 124 1024 131 HOH HOH A . D 4 HOH 125 1025 132 HOH HOH A . D 4 HOH 126 1026 133 HOH HOH A . D 4 HOH 127 1027 134 HOH HOH A . D 4 HOH 128 1028 135 HOH HOH A . D 4 HOH 129 1029 136 HOH HOH A . D 4 HOH 130 1030 137 HOH HOH A . D 4 HOH 131 1031 139 HOH HOH A . D 4 HOH 132 1032 140 HOH HOH A . D 4 HOH 133 1033 141 HOH HOH A . D 4 HOH 134 1034 142 HOH HOH A . D 4 HOH 135 1035 143 HOH HOH A . D 4 HOH 136 1036 144 HOH HOH A . D 4 HOH 137 1037 145 HOH HOH A . D 4 HOH 138 1038 147 HOH HOH A . D 4 HOH 139 1039 148 HOH HOH A . D 4 HOH 140 1040 149 HOH HOH A . D 4 HOH 141 1041 152 HOH HOH A . D 4 HOH 142 1042 153 HOH HOH A . D 4 HOH 143 1043 154 HOH HOH A . D 4 HOH 144 1044 156 HOH HOH A . D 4 HOH 145 1045 157 HOH HOH A . D 4 HOH 146 1046 158 HOH HOH A . D 4 HOH 147 1047 159 HOH HOH A . D 4 HOH 148 1048 160 HOH HOH A . D 4 HOH 149 1049 161 HOH HOH A . D 4 HOH 150 1050 162 HOH HOH A . D 4 HOH 151 1051 164 HOH HOH A . D 4 HOH 152 1052 165 HOH HOH A . D 4 HOH 153 1053 166 HOH HOH A . D 4 HOH 154 1054 167 HOH HOH A . D 4 HOH 155 1055 169 HOH HOH A . D 4 HOH 156 1056 170 HOH HOH A . D 4 HOH 157 1057 173 HOH HOH A . D 4 HOH 158 1058 174 HOH HOH A . D 4 HOH 159 1059 176 HOH HOH A . D 4 HOH 160 1060 177 HOH HOH A . D 4 HOH 161 1061 178 HOH HOH A . D 4 HOH 162 1062 180 HOH HOH A . D 4 HOH 163 1063 181 HOH HOH A . D 4 HOH 164 1064 182 HOH HOH A . D 4 HOH 165 1065 184 HOH HOH A . D 4 HOH 166 1066 186 HOH HOH A . D 4 HOH 167 1067 187 HOH HOH A . D 4 HOH 168 1068 189 HOH HOH A . D 4 HOH 169 1069 190 HOH HOH A . D 4 HOH 170 1070 193 HOH HOH A . D 4 HOH 171 1071 194 HOH HOH A . D 4 HOH 172 1072 195 HOH HOH A . D 4 HOH 173 1073 197 HOH HOH A . D 4 HOH 174 1074 199 HOH HOH A . D 4 HOH 175 1075 203 HOH HOH A . D 4 HOH 176 1076 205 HOH HOH A . D 4 HOH 177 1077 208 HOH HOH A . D 4 HOH 178 1078 209 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_900117 _pdbx_molecule_features.name 4beta-beta-xylotriose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Metabolism _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900117 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLN 47 ? A GLN 30 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 OE1 ? A GLU 49 ? A GLU 32 ? 1_555 104.0 ? 2 OE1 ? A GLN 47 ? A GLN 30 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 OE2 ? A GLU 49 ? A GLU 32 ? 1_555 88.5 ? 3 OE1 ? A GLU 49 ? A GLU 32 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 OE2 ? A GLU 49 ? A GLU 32 ? 1_555 47.6 ? 4 OE1 ? A GLN 47 ? A GLN 30 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? A SER 69 ? A SER 52 ? 1_555 150.1 ? 5 OE1 ? A GLU 49 ? A GLU 32 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? A SER 69 ? A SER 52 ? 1_555 86.3 ? 6 OE2 ? A GLU 49 ? A GLU 32 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? A SER 69 ? A SER 52 ? 1_555 77.9 ? 7 OE1 ? A GLN 47 ? A GLN 30 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 OD1 ? A ASP 159 ? A ASP 142 ? 1_555 94.9 ? 8 OE1 ? A GLU 49 ? A GLU 32 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 OD1 ? A ASP 159 ? A ASP 142 ? 1_555 154.9 ? 9 OE2 ? A GLU 49 ? A GLU 32 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 OD1 ? A ASP 159 ? A ASP 142 ? 1_555 151.0 ? 10 O ? A SER 69 ? A SER 52 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 OD1 ? A ASP 159 ? A ASP 142 ? 1_555 85.2 ? 11 OE1 ? A GLN 47 ? A GLN 30 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? A ASP 159 ? A ASP 142 ? 1_555 87.9 ? 12 OE1 ? A GLU 49 ? A GLU 32 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? A ASP 159 ? A ASP 142 ? 1_555 85.2 ? 13 OE2 ? A GLU 49 ? A GLU 32 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? A ASP 159 ? A ASP 142 ? 1_555 129.8 ? 14 O ? A SER 69 ? A SER 52 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? A ASP 159 ? A ASP 142 ? 1_555 121.3 ? 15 OD1 ? A ASP 159 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? A ASP 159 ? A ASP 142 ? 1_555 79.2 ? 16 OE1 ? A GLN 47 ? A GLN 30 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? D HOH . ? A HOH 992 ? 1_555 66.9 ? 17 OE1 ? A GLU 49 ? A GLU 32 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? D HOH . ? A HOH 992 ? 1_555 108.6 ? 18 OE2 ? A GLU 49 ? A GLU 32 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? D HOH . ? A HOH 992 ? 1_555 61.2 ? 19 O ? A SER 69 ? A SER 52 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? D HOH . ? A HOH 992 ? 1_555 83.3 ? 20 OD1 ? A ASP 159 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? D HOH . ? A HOH 992 ? 1_555 93.8 ? 21 O ? A ASP 159 ? A ASP 142 ? 1_555 CA ? C CA . ? A CA 900 ? 1_555 O ? D HOH . ? A HOH 992 ? 1_555 153.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-03-18 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-08-16 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Refinement description' 12 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' entity_name_com 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_molecule_features 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' pdbx_struct_assembly_gen 15 4 'Structure model' pdbx_struct_conn_angle 16 4 'Structure model' struct_asym 17 4 'Structure model' struct_conn 18 4 'Structure model' struct_ref_seq_dif 19 4 'Structure model' struct_site 20 4 'Structure model' struct_site_gen 21 5 'Structure model' chem_comp 22 5 'Structure model' chem_comp_atom 23 5 'Structure model' chem_comp_bond 24 5 'Structure model' database_2 25 5 'Structure model' pdbx_initial_refinement_model 26 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_seq_id' 8 4 'Structure model' '_atom_site.label_asym_id' 9 4 'Structure model' '_atom_site.label_atom_id' 10 4 'Structure model' '_atom_site.type_symbol' 11 4 'Structure model' '_chem_comp.name' 12 4 'Structure model' '_chem_comp.type' 13 4 'Structure model' '_entity.formula_weight' 14 4 'Structure model' '_entity.pdbx_description' 15 4 'Structure model' '_entity.pdbx_number_of_molecules' 16 4 'Structure model' '_entity.type' 17 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 31 4 'Structure model' '_pdbx_struct_conn_angle.value' 32 4 'Structure model' '_struct_conn.pdbx_dist_value' 33 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 34 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 35 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 36 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 37 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 38 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 39 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 40 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 41 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 42 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 43 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 44 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 45 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 46 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 47 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 48 4 'Structure model' '_struct_ref_seq_dif.details' 49 5 'Structure model' '_chem_comp.pdbx_synonyms' 50 5 'Structure model' '_database_2.pdbx_DOI' 51 5 'Structure model' '_database_2.pdbx_database_accession' 52 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 REFMAC refinement 5.1.24 ? 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 35 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 35 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 35 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.72 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.42 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 22 ? ? -167.24 119.09 2 1 ASP A 33 ? ? -94.86 34.92 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -16 ? A MET 1 2 1 Y 1 A GLY -15 ? A GLY 2 3 1 Y 1 A SER -14 ? A SER 3 4 1 Y 1 A SER -13 ? A SER 4 5 1 Y 1 A HIS -12 ? A HIS 5 6 1 Y 1 A HIS -11 ? A HIS 6 7 1 Y 1 A HIS -10 ? A HIS 7 8 1 Y 1 A HIS -9 ? A HIS 8 9 1 Y 1 A HIS -8 ? A HIS 9 10 1 Y 1 A HIS -7 ? A HIS 10 11 1 Y 1 A SER -6 ? A SER 11 12 1 Y 1 A SER -5 ? A SER 12 13 1 Y 1 A GLY -4 ? A GLY 13 14 1 Y 1 A LEU -3 ? A LEU 14 15 1 Y 1 A VAL -2 ? A VAL 15 16 1 Y 1 A PRO -1 ? A PRO 16 17 1 Y 1 A ARG 0 ? A ARG 17 18 1 Y 1 A GLY 1 ? A GLY 18 19 1 Y 1 A SER 2 ? A SER 19 20 1 Y 1 A HIS 3 ? A HIS 20 21 1 Y 1 A MET 4 ? A MET 21 22 1 Y 1 A ALA 5 ? A ALA 22 23 1 Y 1 A SER 6 ? A SER 23 24 1 Y 1 A THR 7 ? A THR 24 25 1 Y 1 A PRO 8 ? A PRO 25 26 1 Y 1 A ALA 9 ? A ALA 26 27 1 Y 1 A ASN 10 ? A ASN 27 28 1 Y 1 A VAL 11 ? A VAL 28 29 1 Y 1 A ASN 12 ? A ASN 29 30 1 Y 1 A SER 13 ? A SER 30 31 1 Y 1 A GLY 14 ? A GLY 31 32 1 Y 1 A PRO 15 ? A PRO 32 33 1 Y 1 A THR 16 ? A THR 33 34 1 Y 1 A SER 17 ? A SER 34 35 1 Y 1 A PRO 18 ? A PRO 35 36 1 Y 1 A VAL 19 ? A VAL 36 37 1 Y 1 A SER 149 ? A SER 166 38 1 Y 1 A GLY 150 ? A GLY 167 39 1 Y 1 A THR 151 ? A THR 168 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 GLN N N N N 75 GLN CA C N S 76 GLN C C N N 77 GLN O O N N 78 GLN CB C N N 79 GLN CG C N N 80 GLN CD C N N 81 GLN OE1 O N N 82 GLN NE2 N N N 83 GLN OXT O N N 84 GLN H H N N 85 GLN H2 H N N 86 GLN HA H N N 87 GLN HB2 H N N 88 GLN HB3 H N N 89 GLN HG2 H N N 90 GLN HG3 H N N 91 GLN HE21 H N N 92 GLN HE22 H N N 93 GLN HXT H N N 94 GLU N N N N 95 GLU CA C N S 96 GLU C C N N 97 GLU O O N N 98 GLU CB C N N 99 GLU CG C N N 100 GLU CD C N N 101 GLU OE1 O N N 102 GLU OE2 O N N 103 GLU OXT O N N 104 GLU H H N N 105 GLU H2 H N N 106 GLU HA H N N 107 GLU HB2 H N N 108 GLU HB3 H N N 109 GLU HG2 H N N 110 GLU HG3 H N N 111 GLU HE2 H N N 112 GLU HXT H N N 113 GLY N N N N 114 GLY CA C N N 115 GLY C C N N 116 GLY O O N N 117 GLY OXT O N N 118 GLY H H N N 119 GLY H2 H N N 120 GLY HA2 H N N 121 GLY HA3 H N N 122 GLY HXT H N N 123 HIS N N N N 124 HIS CA C N S 125 HIS C C N N 126 HIS O O N N 127 HIS CB C N N 128 HIS CG C Y N 129 HIS ND1 N Y N 130 HIS CD2 C Y N 131 HIS CE1 C Y N 132 HIS NE2 N Y N 133 HIS OXT O N N 134 HIS H H N N 135 HIS H2 H N N 136 HIS HA H N N 137 HIS HB2 H N N 138 HIS HB3 H N N 139 HIS HD1 H N N 140 HIS HD2 H N N 141 HIS HE1 H N N 142 HIS HE2 H N N 143 HIS HXT H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 ILE N N N N 148 ILE CA C N S 149 ILE C C N N 150 ILE O O N N 151 ILE CB C N S 152 ILE CG1 C N N 153 ILE CG2 C N N 154 ILE CD1 C N N 155 ILE OXT O N N 156 ILE H H N N 157 ILE H2 H N N 158 ILE HA H N N 159 ILE HB H N N 160 ILE HG12 H N N 161 ILE HG13 H N N 162 ILE HG21 H N N 163 ILE HG22 H N N 164 ILE HG23 H N N 165 ILE HD11 H N N 166 ILE HD12 H N N 167 ILE HD13 H N N 168 ILE HXT H N N 169 LEU N N N N 170 LEU CA C N S 171 LEU C C N N 172 LEU O O N N 173 LEU CB C N N 174 LEU CG C N N 175 LEU CD1 C N N 176 LEU CD2 C N N 177 LEU OXT O N N 178 LEU H H N N 179 LEU H2 H N N 180 LEU HA H N N 181 LEU HB2 H N N 182 LEU HB3 H N N 183 LEU HG H N N 184 LEU HD11 H N N 185 LEU HD12 H N N 186 LEU HD13 H N N 187 LEU HD21 H N N 188 LEU HD22 H N N 189 LEU HD23 H N N 190 LEU HXT H N N 191 LYS N N N N 192 LYS CA C N S 193 LYS C C N N 194 LYS O O N N 195 LYS CB C N N 196 LYS CG C N N 197 LYS CD C N N 198 LYS CE C N N 199 LYS NZ N N N 200 LYS OXT O N N 201 LYS H H N N 202 LYS H2 H N N 203 LYS HA H N N 204 LYS HB2 H N N 205 LYS HB3 H N N 206 LYS HG2 H N N 207 LYS HG3 H N N 208 LYS HD2 H N N 209 LYS HD3 H N N 210 LYS HE2 H N N 211 LYS HE3 H N N 212 LYS HZ1 H N N 213 LYS HZ2 H N N 214 LYS HZ3 H N N 215 LYS HXT H N N 216 MET N N N N 217 MET CA C N S 218 MET C C N N 219 MET O O N N 220 MET CB C N N 221 MET CG C N N 222 MET SD S N N 223 MET CE C N N 224 MET OXT O N N 225 MET H H N N 226 MET H2 H N N 227 MET HA H N N 228 MET HB2 H N N 229 MET HB3 H N N 230 MET HG2 H N N 231 MET HG3 H N N 232 MET HE1 H N N 233 MET HE2 H N N 234 MET HE3 H N N 235 MET HXT H N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 THR N N N N 291 THR CA C N S 292 THR C C N N 293 THR O O N N 294 THR CB C N R 295 THR OG1 O N N 296 THR CG2 C N N 297 THR OXT O N N 298 THR H H N N 299 THR H2 H N N 300 THR HA H N N 301 THR HB H N N 302 THR HG1 H N N 303 THR HG21 H N N 304 THR HG22 H N N 305 THR HG23 H N N 306 THR HXT H N N 307 TRP N N N N 308 TRP CA C N S 309 TRP C C N N 310 TRP O O N N 311 TRP CB C N N 312 TRP CG C Y N 313 TRP CD1 C Y N 314 TRP CD2 C Y N 315 TRP NE1 N Y N 316 TRP CE2 C Y N 317 TRP CE3 C Y N 318 TRP CZ2 C Y N 319 TRP CZ3 C Y N 320 TRP CH2 C Y N 321 TRP OXT O N N 322 TRP H H N N 323 TRP H2 H N N 324 TRP HA H N N 325 TRP HB2 H N N 326 TRP HB3 H N N 327 TRP HD1 H N N 328 TRP HE1 H N N 329 TRP HE3 H N N 330 TRP HZ2 H N N 331 TRP HZ3 H N N 332 TRP HH2 H N N 333 TRP HXT H N N 334 TYR N N N N 335 TYR CA C N S 336 TYR C C N N 337 TYR O O N N 338 TYR CB C N N 339 TYR CG C Y N 340 TYR CD1 C Y N 341 TYR CD2 C Y N 342 TYR CE1 C Y N 343 TYR CE2 C Y N 344 TYR CZ C Y N 345 TYR OH O N N 346 TYR OXT O N N 347 TYR H H N N 348 TYR H2 H N N 349 TYR HA H N N 350 TYR HB2 H N N 351 TYR HB3 H N N 352 TYR HD1 H N N 353 TYR HD2 H N N 354 TYR HE1 H N N 355 TYR HE2 H N N 356 TYR HH H N N 357 TYR HXT H N N 358 VAL N N N N 359 VAL CA C N S 360 VAL C C N N 361 VAL O O N N 362 VAL CB C N N 363 VAL CG1 C N N 364 VAL CG2 C N N 365 VAL OXT O N N 366 VAL H H N N 367 VAL H2 H N N 368 VAL HA H N N 369 VAL HB H N N 370 VAL HG11 H N N 371 VAL HG12 H N N 372 VAL HG13 H N N 373 VAL HG21 H N N 374 VAL HG22 H N N 375 VAL HG23 H N N 376 VAL HXT H N N 377 XYP O1 O N N 378 XYP C1 C N R 379 XYP C2 C N R 380 XYP C3 C N S 381 XYP C4 C N R 382 XYP C5 C N N 383 XYP O2 O N N 384 XYP O3 O N N 385 XYP O4 O N N 386 XYP O5 O N N 387 XYP HO1 H N N 388 XYP H1 H N N 389 XYP H2 H N N 390 XYP H3 H N N 391 XYP H4 H N N 392 XYP H51 H N N 393 XYP H52 H N N 394 XYP HO2 H N N 395 XYP HO3 H N N 396 XYP HO4 H N N 397 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 XYP O1 C1 sing N N 363 XYP O1 HO1 sing N N 364 XYP C1 C2 sing N N 365 XYP C1 O5 sing N N 366 XYP C1 H1 sing N N 367 XYP C2 C3 sing N N 368 XYP C2 O2 sing N N 369 XYP C2 H2 sing N N 370 XYP C3 C4 sing N N 371 XYP C3 O3 sing N N 372 XYP C3 H3 sing N N 373 XYP C4 C5 sing N N 374 XYP C4 O4 sing N N 375 XYP C4 H4 sing N N 376 XYP C5 O5 sing N N 377 XYP C5 H51 sing N N 378 XYP C5 H52 sing N N 379 XYP O2 HO2 sing N N 380 XYP O3 HO3 sing N N 381 XYP O4 HO4 sing N N 382 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 XYP 1 B XYP 1 V XYS 802 n B 2 XYP 2 B XYP 2 V XYS 801 n B 2 XYP 3 B XYP 3 V XYS 800 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier XYP 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DXylpb XYP 'COMMON NAME' GMML 1.0 b-D-xylopyranose XYP 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Xylp XYP 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Xyl # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DXylpb1-4DXylpb1-4DXylpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,3,2/[a212h-1b_1-5]/1-1-1/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Xylp]{[(4+1)][b-D-Xylp]{[(4+1)][b-D-Xylp]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 XYP C1 O1 1 XYP O4 HO4 sing ? 2 2 3 XYP C1 O1 2 XYP O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 XYP 1 n 2 XYP 2 n 2 XYP 3 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1GMM _pdbx_initial_refinement_model.details ? #