data_1NK8 # _entry.id 1NK8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1NK8 pdb_00001nk8 10.2210/pdb1nk8/pdb NDB PD0381 ? ? RCSB RCSB017944 ? ? WWPDB D_1000017944 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1NJW 'GUANINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE' unspecified PDB 1NJX 'THYMINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE' unspecified PDB 1NJY 'THYMINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE' unspecified PDB 1NJZ 'CYTOSINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE' unspecified PDB 1NK0 'ADENINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE' unspecified PDB 1NK4 'GUANINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE' unspecified PDB 1NK5 'ADENINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE' unspecified PDB 1NK6 'CYTOSINE-CYTOSINE MISMATCH AT THE POLYMERASE ACTIVE SITE' unspecified PDB 1NK7 'GUANINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE' unspecified PDB 1NK9 ;A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER TWO ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP AND DGTP. ; unspecified PDB 1NKB ;A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER THREE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, AND DTTP. ; unspecified PDB 1NKC ;A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER FIVE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, DTTP, AND DATP. ; unspecified PDB 1NKE ;A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A CYTOSINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP. ; unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NK8 _pdbx_database_status.recvd_initial_deposition_date 2003-01-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Johnson, S.J.' 1 'Beese, L.S.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structures of mismatch replication errors observed in a DNA polymerase.' 'Cell(Cambridge,Mass.)' 116 803 816 2004 CELLB5 US 0092-8674 0998 ? 15035983 '10.1016/S0092-8674(04)00252-1' 1 'Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations.' Proc.Natl.Acad.Sci.USA 100 3895 3900 2003 PNASA6 US 0027-8424 0040 ? 12649320 10.1073/pnas.0630532100 2 'Visualizing DNA Replication in a Catalytically Active Bacillus DNA Polymerase Crystal' Nature 391 304 307 1998 NATUAS UK 0028-0836 0006 ? ? 10.1038/34693 3 'Crystal Structure of a Thermostable Bacillus DNA Polymerase I Large Fragment at 2.1 A Resolution' Structure 5 95 108 1997 STRUE6 UK 0969-2126 2005 ? ? '10.1016/S0969-2126(97)00169-X' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Johnson, S.J.' 1 ? primary 'Beese, L.S.' 2 ? 1 'Johnson, S.J.' 3 ? 1 'Taylor, J.S.' 4 ? 1 'Beese, L.S.' 5 ? 2 'Kiefer, J.R.' 6 ? 2 'Mao, C.' 7 ? 2 'Braman, J.C.' 8 ? 2 'Beese, L.S.' 9 ? 3 'Kiefer, J.R.' 10 ? 3 'Mao, C.' 11 ? 3 'Hansen, C.J.' 12 ? 3 'Basehore, S.L.' 13 ? 3 'Hogrefe, H.H.' 14 ? 3 'Braman, J.C.' 15 ? 3 'Beese, L.S.' 16 ? # _cell.entry_id 1NK8 _cell.length_a 87.723 _cell.length_b 93.579 _cell.length_c 105.279 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NK8 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'DNA PRIMER STRAND' 3359.199 1 ? ? ? ? 2 polymer syn 'DNA TEMPLATE STRAND' 4600.983 1 ? ? ? ? 3 polymer man 'DNA POLYMERASE I' 66172.844 1 2.7.7.7 ? 'BACILLUS FRAGMENT (ANALOGOUS TO THE E. COLI KLENOW FRAGMENT)' ? 4 branched man 'beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose' 342.297 3 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 7 water nat water 18.015 532 ? ? ? ? # _entity_name_com.entity_id 4 _entity_name_com.name sucrose # _entity_name_sys.entity_id 3 _entity_name_sys.name 'EC 2.7.7.7' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DA)(DT)(DC)(DA)(DG)(DC)(DG)(DC)' GCGATCAGCGC B ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DA)(DC)(DG)(DT)(DG)(DC)(DT)(DG)(DA)(DT)(DC)(DG)(DC)' GTACGTGCTGATCGC C ? 3 'polypeptide(L)' no no ;AKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRA AVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWE LERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGV ILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRL SSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDE VTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDI TSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAV TLRVPLKVDYHYGSTWYDAK ; ;AKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRA AVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWE LERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVDTKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGV ILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRL SSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDE VTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDI TSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAV TLRVPLKVDYHYGSTWYDAK ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DT n 1 6 DC n 1 7 DA n 1 8 DG n 1 9 DC n 1 10 DG n 1 11 DC n 2 1 DG n 2 2 DT n 2 3 DA n 2 4 DC n 2 5 DG n 2 6 DT n 2 7 DG n 2 8 DC n 2 9 DT n 2 10 DG n 2 11 DA n 2 12 DT n 2 13 DC n 2 14 DG n 2 15 DC n 3 1 ALA n 3 2 LYS n 3 3 MET n 3 4 ALA n 3 5 PHE n 3 6 THR n 3 7 LEU n 3 8 ALA n 3 9 ASP n 3 10 ARG n 3 11 VAL n 3 12 THR n 3 13 GLU n 3 14 GLU n 3 15 MET n 3 16 LEU n 3 17 ALA n 3 18 ASP n 3 19 LYS n 3 20 ALA n 3 21 ALA n 3 22 LEU n 3 23 VAL n 3 24 VAL n 3 25 GLU n 3 26 VAL n 3 27 VAL n 3 28 GLU n 3 29 GLU n 3 30 ASN n 3 31 TYR n 3 32 HIS n 3 33 ASP n 3 34 ALA n 3 35 PRO n 3 36 ILE n 3 37 VAL n 3 38 GLY n 3 39 ILE n 3 40 ALA n 3 41 VAL n 3 42 VAL n 3 43 ASN n 3 44 GLU n 3 45 HIS n 3 46 GLY n 3 47 ARG n 3 48 PHE n 3 49 PHE n 3 50 LEU n 3 51 ARG n 3 52 PRO n 3 53 GLU n 3 54 THR n 3 55 ALA n 3 56 LEU n 3 57 ALA n 3 58 ASP n 3 59 PRO n 3 60 GLN n 3 61 PHE n 3 62 VAL n 3 63 ALA n 3 64 TRP n 3 65 LEU n 3 66 GLY n 3 67 ASP n 3 68 GLU n 3 69 THR n 3 70 LYS n 3 71 LYS n 3 72 LYS n 3 73 SER n 3 74 MET n 3 75 PHE n 3 76 ASP n 3 77 SER n 3 78 LYS n 3 79 ARG n 3 80 ALA n 3 81 ALA n 3 82 VAL n 3 83 ALA n 3 84 LEU n 3 85 LYS n 3 86 TRP n 3 87 LYS n 3 88 GLY n 3 89 ILE n 3 90 GLU n 3 91 LEU n 3 92 CYS n 3 93 GLY n 3 94 VAL n 3 95 SER n 3 96 PHE n 3 97 ASP n 3 98 LEU n 3 99 LEU n 3 100 LEU n 3 101 ALA n 3 102 ALA n 3 103 TYR n 3 104 LEU n 3 105 LEU n 3 106 ASP n 3 107 PRO n 3 108 ALA n 3 109 GLN n 3 110 GLY n 3 111 VAL n 3 112 ASP n 3 113 ASP n 3 114 VAL n 3 115 ALA n 3 116 ALA n 3 117 ALA n 3 118 ALA n 3 119 LYS n 3 120 MET n 3 121 LYS n 3 122 GLN n 3 123 TYR n 3 124 GLU n 3 125 ALA n 3 126 VAL n 3 127 ARG n 3 128 PRO n 3 129 ASP n 3 130 GLU n 3 131 ALA n 3 132 VAL n 3 133 TYR n 3 134 GLY n 3 135 LYS n 3 136 GLY n 3 137 ALA n 3 138 LYS n 3 139 ARG n 3 140 ALA n 3 141 VAL n 3 142 PRO n 3 143 ASP n 3 144 GLU n 3 145 PRO n 3 146 VAL n 3 147 LEU n 3 148 ALA n 3 149 GLU n 3 150 HIS n 3 151 LEU n 3 152 VAL n 3 153 ARG n 3 154 LYS n 3 155 ALA n 3 156 ALA n 3 157 ALA n 3 158 ILE n 3 159 TRP n 3 160 GLU n 3 161 LEU n 3 162 GLU n 3 163 ARG n 3 164 PRO n 3 165 PHE n 3 166 LEU n 3 167 ASP n 3 168 GLU n 3 169 LEU n 3 170 ARG n 3 171 ARG n 3 172 ASN n 3 173 GLU n 3 174 GLN n 3 175 ASP n 3 176 ARG n 3 177 LEU n 3 178 LEU n 3 179 VAL n 3 180 GLU n 3 181 LEU n 3 182 GLU n 3 183 GLN n 3 184 PRO n 3 185 LEU n 3 186 SER n 3 187 SER n 3 188 ILE n 3 189 LEU n 3 190 ALA n 3 191 GLU n 3 192 MET n 3 193 GLU n 3 194 PHE n 3 195 ALA n 3 196 GLY n 3 197 VAL n 3 198 LYS n 3 199 VAL n 3 200 ASP n 3 201 THR n 3 202 LYS n 3 203 ARG n 3 204 LEU n 3 205 GLU n 3 206 GLN n 3 207 MET n 3 208 GLY n 3 209 LYS n 3 210 GLU n 3 211 LEU n 3 212 ALA n 3 213 GLU n 3 214 GLN n 3 215 LEU n 3 216 GLY n 3 217 THR n 3 218 VAL n 3 219 GLU n 3 220 GLN n 3 221 ARG n 3 222 ILE n 3 223 TYR n 3 224 GLU n 3 225 LEU n 3 226 ALA n 3 227 GLY n 3 228 GLN n 3 229 GLU n 3 230 PHE n 3 231 ASN n 3 232 ILE n 3 233 ASN n 3 234 SER n 3 235 PRO n 3 236 LYS n 3 237 GLN n 3 238 LEU n 3 239 GLY n 3 240 VAL n 3 241 ILE n 3 242 LEU n 3 243 PHE n 3 244 GLU n 3 245 LYS n 3 246 LEU n 3 247 GLN n 3 248 LEU n 3 249 PRO n 3 250 VAL n 3 251 LEU n 3 252 LYS n 3 253 LYS n 3 254 THR n 3 255 LYS n 3 256 THR n 3 257 GLY n 3 258 TYR n 3 259 SER n 3 260 THR n 3 261 SER n 3 262 ALA n 3 263 ASP n 3 264 VAL n 3 265 LEU n 3 266 GLU n 3 267 LYS n 3 268 LEU n 3 269 ALA n 3 270 PRO n 3 271 TYR n 3 272 HIS n 3 273 GLU n 3 274 ILE n 3 275 VAL n 3 276 GLU n 3 277 ASN n 3 278 ILE n 3 279 LEU n 3 280 HIS n 3 281 TYR n 3 282 ARG n 3 283 GLN n 3 284 LEU n 3 285 GLY n 3 286 LYS n 3 287 LEU n 3 288 GLN n 3 289 SER n 3 290 THR n 3 291 TYR n 3 292 ILE n 3 293 GLU n 3 294 GLY n 3 295 LEU n 3 296 LEU n 3 297 LYS n 3 298 VAL n 3 299 VAL n 3 300 ARG n 3 301 PRO n 3 302 ASP n 3 303 THR n 3 304 LYS n 3 305 LYS n 3 306 VAL n 3 307 HIS n 3 308 THR n 3 309 ILE n 3 310 PHE n 3 311 ASN n 3 312 GLN n 3 313 ALA n 3 314 LEU n 3 315 THR n 3 316 GLN n 3 317 THR n 3 318 GLY n 3 319 ARG n 3 320 LEU n 3 321 SER n 3 322 SER n 3 323 THR n 3 324 GLU n 3 325 PRO n 3 326 ASN n 3 327 LEU n 3 328 GLN n 3 329 ASN n 3 330 ILE n 3 331 PRO n 3 332 ILE n 3 333 ARG n 3 334 LEU n 3 335 GLU n 3 336 GLU n 3 337 GLY n 3 338 ARG n 3 339 LYS n 3 340 ILE n 3 341 ARG n 3 342 GLN n 3 343 ALA n 3 344 PHE n 3 345 VAL n 3 346 PRO n 3 347 SER n 3 348 GLU n 3 349 SER n 3 350 ASP n 3 351 TRP n 3 352 LEU n 3 353 ILE n 3 354 PHE n 3 355 ALA n 3 356 ALA n 3 357 ASP n 3 358 TYR n 3 359 SER n 3 360 GLN n 3 361 ILE n 3 362 GLU n 3 363 LEU n 3 364 ARG n 3 365 VAL n 3 366 LEU n 3 367 ALA n 3 368 HIS n 3 369 ILE n 3 370 ALA n 3 371 GLU n 3 372 ASP n 3 373 ASP n 3 374 ASN n 3 375 LEU n 3 376 MET n 3 377 GLU n 3 378 ALA n 3 379 PHE n 3 380 ARG n 3 381 ARG n 3 382 ASP n 3 383 LEU n 3 384 ASP n 3 385 ILE n 3 386 HIS n 3 387 THR n 3 388 LYS n 3 389 THR n 3 390 ALA n 3 391 MET n 3 392 ASP n 3 393 ILE n 3 394 PHE n 3 395 GLN n 3 396 VAL n 3 397 SER n 3 398 GLU n 3 399 ASP n 3 400 GLU n 3 401 VAL n 3 402 THR n 3 403 PRO n 3 404 ASN n 3 405 MET n 3 406 ARG n 3 407 ARG n 3 408 GLN n 3 409 ALA n 3 410 LYS n 3 411 ALA n 3 412 VAL n 3 413 ASN n 3 414 PHE n 3 415 GLY n 3 416 ILE n 3 417 VAL n 3 418 TYR n 3 419 GLY n 3 420 ILE n 3 421 SER n 3 422 ASP n 3 423 TYR n 3 424 GLY n 3 425 LEU n 3 426 ALA n 3 427 GLN n 3 428 ASN n 3 429 LEU n 3 430 ASN n 3 431 ILE n 3 432 SER n 3 433 ARG n 3 434 LYS n 3 435 GLU n 3 436 ALA n 3 437 ALA n 3 438 GLU n 3 439 PHE n 3 440 ILE n 3 441 GLU n 3 442 ARG n 3 443 TYR n 3 444 PHE n 3 445 GLU n 3 446 SER n 3 447 PHE n 3 448 PRO n 3 449 GLY n 3 450 VAL n 3 451 LYS n 3 452 ARG n 3 453 TYR n 3 454 MET n 3 455 GLU n 3 456 ASN n 3 457 ILE n 3 458 VAL n 3 459 GLN n 3 460 GLU n 3 461 ALA n 3 462 LYS n 3 463 GLN n 3 464 LYS n 3 465 GLY n 3 466 TYR n 3 467 VAL n 3 468 THR n 3 469 THR n 3 470 LEU n 3 471 LEU n 3 472 HIS n 3 473 ARG n 3 474 ARG n 3 475 ARG n 3 476 TYR n 3 477 LEU n 3 478 PRO n 3 479 ASP n 3 480 ILE n 3 481 THR n 3 482 SER n 3 483 ARG n 3 484 ASN n 3 485 PHE n 3 486 ASN n 3 487 VAL n 3 488 ARG n 3 489 SER n 3 490 PHE n 3 491 ALA n 3 492 GLU n 3 493 ARG n 3 494 MET n 3 495 ALA n 3 496 MET n 3 497 ASN n 3 498 THR n 3 499 PRO n 3 500 ILE n 3 501 GLN n 3 502 GLY n 3 503 SER n 3 504 ALA n 3 505 ALA n 3 506 ASP n 3 507 ILE n 3 508 ILE n 3 509 LYS n 3 510 LYS n 3 511 ALA n 3 512 MET n 3 513 ILE n 3 514 ASP n 3 515 LEU n 3 516 ASN n 3 517 ALA n 3 518 ARG n 3 519 LEU n 3 520 LYS n 3 521 GLU n 3 522 GLU n 3 523 ARG n 3 524 LEU n 3 525 GLN n 3 526 ALA n 3 527 HIS n 3 528 LEU n 3 529 LEU n 3 530 LEU n 3 531 GLN n 3 532 VAL n 3 533 HIS n 3 534 ASP n 3 535 GLU n 3 536 LEU n 3 537 ILE n 3 538 LEU n 3 539 GLU n 3 540 ALA n 3 541 PRO n 3 542 LYS n 3 543 GLU n 3 544 GLU n 3 545 MET n 3 546 GLU n 3 547 ARG n 3 548 LEU n 3 549 CYS n 3 550 ARG n 3 551 LEU n 3 552 VAL n 3 553 PRO n 3 554 GLU n 3 555 VAL n 3 556 MET n 3 557 GLU n 3 558 GLN n 3 559 ALA n 3 560 VAL n 3 561 THR n 3 562 LEU n 3 563 ARG n 3 564 VAL n 3 565 PRO n 3 566 LEU n 3 567 LYS n 3 568 VAL n 3 569 ASP n 3 570 TYR n 3 571 HIS n 3 572 TYR n 3 573 GLY n 3 574 SER n 3 575 THR n 3 576 TRP n 3 577 TYR n 3 578 ASP n 3 579 ALA n 3 580 LYS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Geobacillus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Geobacillus stearothermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1422 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)PLYSS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PET-30A(+)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1NK8 1NK8 ? ? ? 2 2 PDB 1NK8 1NK8 ? ? ? 3 3 UNP DPO1_BACST P52026 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1NK8 B 1 ? 11 ? 1NK8 19 ? 29 ? 19 29 2 2 1NK8 C 1 ? 15 ? 1NK8 0 ? 14 ? 0 14 3 3 1NK8 A 8 ? 580 ? P52026 304 ? 876 ? 304 876 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 FRU 'D-saccharide, beta linking' . beta-D-fructofuranose 'beta-D-fructose; D-fructose; fructose' 'C6 H12 O6' 180.156 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1NK8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_percent_sol 53.96 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.80 _exptl_crystal_grow.pdbx_details 'AMMONIUM SULFATE, MAGNESIUM SULFATE, MPD, MES, pH 5.80, VAPOR DIFFUSION, HANGING DROP, temperature 290K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 ? 'AMMONIUM SULFATE' ? ? ? 1 2 ? 'MAGNESIUM SULFATE' ? ? ? 1 3 ? MPD ? ? ? 1 4 ? MES ? ? ? 1 5 ? water ? ? ? 1 6 ? 'AMMONIUM SULFATE' ? ? ? 1 7 ? 'MAGNESIUM SULFATE' ? ? ? 1 8 ? MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 1998-11-27 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1NK8 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 26.32 _reflns.d_resolution_high 1.9 _reflns.number_obs 64853 _reflns.number_all 64853 _reflns.percent_possible_obs 94.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.066 _reflns.pdbx_netI_over_sigmaI 18.1 _reflns.B_iso_Wilson_estimate 15.9 _reflns.pdbx_redundancy 4.3 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 64.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.257 _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy 1.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 4380 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1NK8 _refine.ls_number_reflns_obs 60471 _refine.ls_number_reflns_all 63111 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 2209622.77 _refine.pdbx_data_cutoff_low_absF 0.0 _refine.ls_d_res_low 26.32 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 87.8 _refine.ls_R_factor_obs 0.207 _refine.ls_R_factor_all 0.208 _refine.ls_R_factor_R_work 0.19 _refine.ls_R_factor_R_free 0.219 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 3048 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 23.9 _refine.aniso_B[1][1] 5.99 _refine.aniso_B[2][2] -3.87 _refine.aniso_B[3][3] -2.12 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.381409 _refine.solvent_model_param_bsol 44.1233 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;THE BACILLUS POLYMERASE WAS CO- CRYSTALLIZED WITH A DNA CONTAINING A 10 BASE PAIR DUPLEX AND A 5 BASE 5' TEMPLATE OVERHANG. THE CRYSTAL WAS SUBSEQUENTLY PLACED INTO A STABILIZING SOLUTION CONTAINING DCTP. THE RESULTING PRODUCT COMPLEX CONTAINED 11 BASE PAIRS OF DUPLEX DNA AND A 4 BASE 5' TEMPLATE OVERHANG. THE LAST THREE BASES IN THE OVERHANG ARE DISORDERED AND ARE NOT INCLUDED IN THE MODEL. A 3' PHOSPHATE WAS LOCATED ON THE TEMPLATE STRAND (CHAIN C) TO ENSURE THAT THE DNA DUPLEX WAS NOT BOUND BACKWARDS BY THE POLYMERASE DURING CRYSTALLIZATION. ELECTRON DENSITY WAS OBSERVED FOR ALL PROTEIN SIDE CHAINS EXCEPT LYSINE 298, WHICH WAS MODELLED TO THE BETA CARBON. THE MAGNESIUM AT POSITION 901 WAS ASSIGNED DUE TO THE LOW REFINED B-FACTOR AND COMPARISON WITH A RELATED KLENTAQ POLYMERASE STRUCTURE (3KTQ). HOWEVER, THE RESOLUTION OF THE STRUCTURE PREVENTS A DEFINITIVE ASSIGNMENT BETWEEN WATER AND MAGNESIUM. ; _refine.pdbx_starting_model 'PDB ENTRY 2BDP' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF 2209622.77 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1NK8 _refine_analyze.Luzzati_coordinate_error_obs 0.20 _refine_analyze.Luzzati_sigma_a_obs 0.10 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.24 _refine_analyze.Luzzati_sigma_a_free 0.14 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4650 _refine_hist.pdbx_number_atoms_nucleic_acid 465 _refine_hist.pdbx_number_atoms_ligand 85 _refine_hist.number_atoms_solvent 532 _refine_hist.number_atoms_total 5732 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 26.32 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.90 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 0.90 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 1.37 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.62 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.49 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.97 _refine_ls_shell.number_reflns_R_work 3081 _refine_ls_shell.R_factor_R_work 0.236 _refine_ls_shell.percent_reflns_obs 47.7 _refine_ls_shell.R_factor_R_free 0.264 _refine_ls_shell.R_factor_R_free_error 0.021 _refine_ls_shell.percent_reflns_R_free 4.9 _refine_ls_shell.number_reflns_R_free 159 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA-MULTI-ENDO.PARAM DNA-RNA-MULTI-ENDO.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 5 SUCROSE.PAR SUCROSE.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1NK8 _struct.title ;A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP. ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NK8 _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'DNA POLYMERASE I, DNA REPLICATION, KLENOW FRAGMENT, PROTEIN-DNA COMPLEX, DNA MISMATCH, TRANSFERASE-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 7 ? L N N 7 ? M N N 7 ? # _struct_biol.id 1 _struct_biol.details 'Exists as a monomer. One molecule per asymmetric unit.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 12 ? ALA C 17 ? THR A 308 ALA A 313 5 ? 6 HELX_P HELX_P2 2 ARG C 51 ? LEU C 56 ? ARG A 347 LEU A 352 1 ? 6 HELX_P HELX_P3 3 ASP C 58 ? ASP C 67 ? ASP A 354 ASP A 363 1 ? 10 HELX_P HELX_P4 4 ASP C 76 ? TRP C 86 ? ASP A 372 TRP A 382 1 ? 11 HELX_P HELX_P5 5 LEU C 98 ? ASP C 106 ? LEU A 394 ASP A 402 1 ? 9 HELX_P HELX_P6 6 PRO C 107 ? GLY C 110 ? PRO A 403 GLY A 406 5 ? 4 HELX_P HELX_P7 7 ASP C 113 ? MET C 120 ? ASP A 409 MET A 416 1 ? 8 HELX_P HELX_P8 8 PRO C 128 ? GLY C 134 ? PRO A 424 GLY A 430 1 ? 7 HELX_P HELX_P9 9 LYS C 135 ? ARG C 139 ? LYS A 431 ARG A 435 5 ? 5 HELX_P HELX_P10 10 ASP C 143 ? ASN C 172 ? ASP A 439 ASN A 468 1 ? 30 HELX_P HELX_P11 11 GLN C 174 ? LEU C 181 ? GLN A 470 LEU A 477 1 ? 8 HELX_P HELX_P12 12 LEU C 181 ? GLY C 196 ? LEU A 477 GLY A 492 1 ? 16 HELX_P HELX_P13 13 ASP C 200 ? GLY C 227 ? ASP A 496 GLY A 523 1 ? 28 HELX_P HELX_P14 14 SER C 234 ? GLU C 244 ? SER A 530 GLU A 540 1 ? 11 HELX_P HELX_P15 15 SER C 261 ? ALA C 269 ? SER A 557 ALA A 565 1 ? 9 HELX_P HELX_P16 16 PRO C 270 ? HIS C 272 ? PRO A 566 HIS A 568 5 ? 3 HELX_P HELX_P17 17 GLU C 273 ? ILE C 292 ? GLU A 569 ILE A 588 1 ? 20 HELX_P HELX_P18 18 ILE C 292 ? VAL C 299 ? ILE A 588 VAL A 595 1 ? 8 HELX_P HELX_P19 19 LEU C 334 ? LYS C 339 ? LEU A 630 LYS A 635 1 ? 6 HELX_P HELX_P20 20 ILE C 340 ? GLN C 342 ? ILE A 636 GLN A 638 5 ? 3 HELX_P HELX_P21 21 GLN C 360 ? GLU C 371 ? GLN A 656 GLU A 667 1 ? 12 HELX_P HELX_P22 22 ASP C 372 ? ARG C 381 ? ASP A 668 ARG A 677 1 ? 10 HELX_P HELX_P23 23 ASP C 384 ? PHE C 394 ? ASP A 680 PHE A 690 1 ? 11 HELX_P HELX_P24 24 SER C 397 ? VAL C 401 ? SER A 693 VAL A 697 5 ? 5 HELX_P HELX_P25 25 THR C 402 ? GLY C 419 ? THR A 698 GLY A 715 1 ? 18 HELX_P HELX_P26 26 SER C 421 ? ASN C 430 ? SER A 717 ASN A 726 1 ? 10 HELX_P HELX_P27 27 SER C 432 ? PHE C 447 ? SER A 728 PHE A 743 1 ? 16 HELX_P HELX_P28 28 PHE C 447 ? GLY C 465 ? PHE A 743 GLY A 761 1 ? 19 HELX_P HELX_P29 29 PRO C 478 ? SER C 482 ? PRO A 774 SER A 778 5 ? 5 HELX_P HELX_P30 30 ASN C 484 ? GLU C 522 ? ASN A 780 GLU A 818 1 ? 39 HELX_P HELX_P31 31 GLU C 544 ? ALA C 559 ? GLU A 840 ALA A 855 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? D GLC . C1 ? ? ? 1_555 D FRU . O2 ? ? D GLC 1 D FRU 2 1_555 ? ? ? ? ? ? ? 1.478 sing ? covale2 covale both ? E GLC . C1 ? ? ? 1_555 E FRU . O2 ? ? E GLC 1 E FRU 2 1_555 ? ? ? ? ? ? ? 1.471 sing ? covale3 covale both ? F GLC . C1 ? ? ? 1_555 F FRU . O2 ? ? F GLC 1 F FRU 2 1_555 ? ? ? ? ? ? ? 1.471 sing ? metalc1 metalc ? ? C ASP 357 OD2 ? ? ? 1_555 G MG . MG ? ? A ASP 653 A MG 909 1_555 ? ? ? ? ? ? ? 2.819 ? ? metalc2 metalc ? ? C TYR 358 O ? ? ? 1_555 G MG . MG ? ? A TYR 654 A MG 909 1_555 ? ? ? ? ? ? ? 2.908 ? ? metalc3 metalc ? ? C ASP 534 OD2 ? ? ? 1_555 G MG . MG ? ? A ASP 830 A MG 909 1_555 ? ? ? ? ? ? ? 2.913 ? ? metalc4 metalc ? ? G MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 909 A HOH 2801 1_555 ? ? ? ? ? ? ? 2.928 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 15 N3 ? ? B DG 19 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 15 O2 ? ? B DG 19 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 15 N4 ? ? B DG 19 C DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 14 N1 ? ? B DC 20 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 14 O6 ? ? B DC 20 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 14 N2 ? ? B DC 20 C DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 13 N3 ? ? B DG 21 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 13 O2 ? ? B DG 21 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 13 N4 ? ? B DG 21 C DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 12 N3 ? ? B DA 22 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 12 O4 ? ? B DA 22 C DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 11 N1 ? ? B DT 23 C DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 11 N6 ? ? B DT 23 C DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 10 N1 ? ? B DC 24 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 10 O6 ? ? B DC 24 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 10 N2 ? ? B DC 24 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 9 N3 ? ? B DA 25 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 9 O4 ? ? B DA 25 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 8 N3 ? ? B DG 26 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 8 O2 ? ? B DG 26 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 8 N4 ? ? B DG 26 C DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 7 N1 ? ? B DC 27 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 7 O6 ? ? B DC 27 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 7 N2 ? ? B DC 27 C DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DT 6 O2 ? ? B DG 28 C DT 5 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DT 6 N3 ? ? B DG 28 C DT 5 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog27 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 5 N1 ? ? B DC 29 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 5 O6 ? ? B DC 29 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 5 N2 ? ? B DC 29 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 324 _struct_mon_prot_cis.label_asym_id C _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 620 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 325 _struct_mon_prot_cis.pdbx_label_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 621 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.17 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 2 ? D ? 4 ? E ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR C 6 ? LEU C 7 ? THR A 302 LEU A 303 A 2 GLY C 46 ? LEU C 50 ? GLY A 342 LEU A 346 A 3 GLY C 38 ? ASN C 43 ? GLY A 334 ASN A 339 A 4 LYS C 19 ? GLU C 25 ? LYS A 315 GLU A 321 A 5 LYS C 71 ? MET C 74 ? LYS A 367 MET A 370 A 6 VAL C 94 ? ASP C 97 ? VAL A 390 ASP A 393 B 1 LYS C 305 ? VAL C 306 ? LYS A 601 VAL A 602 B 2 VAL C 197 ? VAL C 199 ? VAL A 493 VAL A 495 B 3 PHE C 344 ? VAL C 345 ? PHE A 640 VAL A 641 C 1 ILE C 309 ? ASN C 311 ? ILE A 605 ASN A 607 C 2 SER C 321 ? THR C 323 ? SER A 617 THR A 619 D 1 HIS C 527 ? GLN C 531 ? HIS A 823 GLN A 827 D 2 GLU C 535 ? PRO C 541 ? GLU A 831 PRO A 837 D 3 TRP C 351 ? TYR C 358 ? TRP A 647 TYR A 654 D 4 VAL C 568 ? GLY C 573 ? VAL A 864 GLY A 869 E 1 TYR C 466 ? THR C 468 ? TYR A 762 THR A 764 E 2 ARG C 474 ? TYR C 476 ? ARG A 770 TYR A 772 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR C 6 ? N THR A 302 O ARG C 47 ? O ARG A 343 A 2 3 O PHE C 48 ? O PHE A 344 N VAL C 41 ? N VAL A 337 A 3 4 O VAL C 42 ? O VAL A 338 N ALA C 21 ? N ALA A 317 A 4 5 N ALA C 20 ? N ALA A 316 O SER C 73 ? O SER A 369 A 5 6 N MET C 74 ? N MET A 370 O PHE C 96 ? O PHE A 392 B 1 2 O VAL C 306 ? O VAL A 602 N VAL C 197 ? N VAL A 493 B 2 3 N LYS C 198 ? N LYS A 494 O VAL C 345 ? O VAL A 641 C 1 2 N ILE C 309 ? N ILE A 605 O THR C 323 ? O THR A 619 D 1 2 N LEU C 530 ? N LEU A 826 O ILE C 537 ? O ILE A 833 D 2 3 O LEU C 538 ? O LEU A 834 N PHE C 354 ? N PHE A 650 D 3 4 N ALA C 355 ? N ALA A 651 O HIS C 571 ? O HIS A 867 E 1 2 N VAL C 467 ? N VAL A 763 O ARG C 475 ? O ARG A 771 # _database_PDB_matrix.entry_id 1NK8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NK8 _atom_sites.fract_transf_matrix[1][1] 0.011400 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010686 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009499 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 19 19 DG G B . n A 1 2 DC 2 20 20 DC C B . n A 1 3 DG 3 21 21 DG G B . n A 1 4 DA 4 22 22 DA A B . n A 1 5 DT 5 23 23 DT T B . n A 1 6 DC 6 24 24 DC C B . n A 1 7 DA 7 25 25 DA A B . n A 1 8 DG 8 26 26 DG G B . n A 1 9 DC 9 27 27 DC C B . n A 1 10 DG 10 28 28 DG G B . n A 1 11 DC 11 29 29 DC C B . n B 2 1 DG 1 0 ? ? ? C . n B 2 2 DT 2 1 ? ? ? C . n B 2 3 DA 3 2 ? ? ? C . n B 2 4 DC 4 3 3 DC C C . n B 2 5 DG 5 4 4 DG G C . n B 2 6 DT 6 5 5 DT T C . n B 2 7 DG 7 6 6 DG G C . n B 2 8 DC 8 7 7 DC C C . n B 2 9 DT 9 8 8 DT T C . n B 2 10 DG 10 9 9 DG G C . n B 2 11 DA 11 10 10 DA A C . n B 2 12 DT 12 11 11 DT T C . n B 2 13 DC 13 12 12 DC C C . n B 2 14 DG 14 13 13 DG G C . n B 2 15 DC 15 14 14 DC C C . n C 3 1 ALA 1 297 297 ALA ALA A . n C 3 2 LYS 2 298 298 LYS ALA A . n C 3 3 MET 3 299 299 MET MET A . n C 3 4 ALA 4 300 300 ALA ALA A . n C 3 5 PHE 5 301 301 PHE PHE A . n C 3 6 THR 6 302 302 THR THR A . n C 3 7 LEU 7 303 303 LEU LEU A . n C 3 8 ALA 8 304 304 ALA ALA A . n C 3 9 ASP 9 305 305 ASP ASP A . n C 3 10 ARG 10 306 306 ARG ARG A . n C 3 11 VAL 11 307 307 VAL VAL A . n C 3 12 THR 12 308 308 THR THR A . n C 3 13 GLU 13 309 309 GLU GLU A . n C 3 14 GLU 14 310 310 GLU GLU A . n C 3 15 MET 15 311 311 MET MET A . n C 3 16 LEU 16 312 312 LEU LEU A . n C 3 17 ALA 17 313 313 ALA ALA A . n C 3 18 ASP 18 314 314 ASP ASP A . n C 3 19 LYS 19 315 315 LYS LYS A . n C 3 20 ALA 20 316 316 ALA ALA A . n C 3 21 ALA 21 317 317 ALA ALA A . n C 3 22 LEU 22 318 318 LEU LEU A . n C 3 23 VAL 23 319 319 VAL VAL A . n C 3 24 VAL 24 320 320 VAL VAL A . n C 3 25 GLU 25 321 321 GLU GLU A . n C 3 26 VAL 26 322 322 VAL VAL A . n C 3 27 VAL 27 323 323 VAL VAL A . n C 3 28 GLU 28 324 324 GLU GLU A . n C 3 29 GLU 29 325 325 GLU GLU A . n C 3 30 ASN 30 326 326 ASN ASN A . n C 3 31 TYR 31 327 327 TYR TYR A . n C 3 32 HIS 32 328 328 HIS HIS A . n C 3 33 ASP 33 329 329 ASP ASP A . n C 3 34 ALA 34 330 330 ALA ALA A . n C 3 35 PRO 35 331 331 PRO PRO A . n C 3 36 ILE 36 332 332 ILE ILE A . n C 3 37 VAL 37 333 333 VAL VAL A . n C 3 38 GLY 38 334 334 GLY GLY A . n C 3 39 ILE 39 335 335 ILE ILE A . n C 3 40 ALA 40 336 336 ALA ALA A . n C 3 41 VAL 41 337 337 VAL VAL A . n C 3 42 VAL 42 338 338 VAL VAL A . n C 3 43 ASN 43 339 339 ASN ASN A . n C 3 44 GLU 44 340 340 GLU GLU A . n C 3 45 HIS 45 341 341 HIS HIS A . n C 3 46 GLY 46 342 342 GLY GLY A . n C 3 47 ARG 47 343 343 ARG ARG A . n C 3 48 PHE 48 344 344 PHE PHE A . n C 3 49 PHE 49 345 345 PHE PHE A . n C 3 50 LEU 50 346 346 LEU LEU A . n C 3 51 ARG 51 347 347 ARG ARG A . n C 3 52 PRO 52 348 348 PRO PRO A . n C 3 53 GLU 53 349 349 GLU GLU A . n C 3 54 THR 54 350 350 THR THR A . n C 3 55 ALA 55 351 351 ALA ALA A . n C 3 56 LEU 56 352 352 LEU LEU A . n C 3 57 ALA 57 353 353 ALA ALA A . n C 3 58 ASP 58 354 354 ASP ASP A . n C 3 59 PRO 59 355 355 PRO PRO A . n C 3 60 GLN 60 356 356 GLN GLN A . n C 3 61 PHE 61 357 357 PHE PHE A . n C 3 62 VAL 62 358 358 VAL VAL A . n C 3 63 ALA 63 359 359 ALA ALA A . n C 3 64 TRP 64 360 360 TRP TRP A . n C 3 65 LEU 65 361 361 LEU LEU A . n C 3 66 GLY 66 362 362 GLY GLY A . n C 3 67 ASP 67 363 363 ASP ASP A . n C 3 68 GLU 68 364 364 GLU GLU A . n C 3 69 THR 69 365 365 THR THR A . n C 3 70 LYS 70 366 366 LYS LYS A . n C 3 71 LYS 71 367 367 LYS LYS A . n C 3 72 LYS 72 368 368 LYS LYS A . n C 3 73 SER 73 369 369 SER SER A . n C 3 74 MET 74 370 370 MET MET A . n C 3 75 PHE 75 371 371 PHE PHE A . n C 3 76 ASP 76 372 372 ASP ASP A . n C 3 77 SER 77 373 373 SER SER A . n C 3 78 LYS 78 374 374 LYS LYS A . n C 3 79 ARG 79 375 375 ARG ARG A . n C 3 80 ALA 80 376 376 ALA ALA A . n C 3 81 ALA 81 377 377 ALA ALA A . n C 3 82 VAL 82 378 378 VAL VAL A . n C 3 83 ALA 83 379 379 ALA ALA A . n C 3 84 LEU 84 380 380 LEU LEU A . n C 3 85 LYS 85 381 381 LYS LYS A . n C 3 86 TRP 86 382 382 TRP TRP A . n C 3 87 LYS 87 383 383 LYS LYS A . n C 3 88 GLY 88 384 384 GLY GLY A . n C 3 89 ILE 89 385 385 ILE ILE A . n C 3 90 GLU 90 386 386 GLU GLU A . n C 3 91 LEU 91 387 387 LEU LEU A . n C 3 92 CYS 92 388 388 CYS CYS A . n C 3 93 GLY 93 389 389 GLY GLY A . n C 3 94 VAL 94 390 390 VAL VAL A . n C 3 95 SER 95 391 391 SER SER A . n C 3 96 PHE 96 392 392 PHE PHE A . n C 3 97 ASP 97 393 393 ASP ASP A . n C 3 98 LEU 98 394 394 LEU LEU A . n C 3 99 LEU 99 395 395 LEU LEU A . n C 3 100 LEU 100 396 396 LEU LEU A . n C 3 101 ALA 101 397 397 ALA ALA A . n C 3 102 ALA 102 398 398 ALA ALA A . n C 3 103 TYR 103 399 399 TYR TYR A . n C 3 104 LEU 104 400 400 LEU LEU A . n C 3 105 LEU 105 401 401 LEU LEU A . n C 3 106 ASP 106 402 402 ASP ASP A . n C 3 107 PRO 107 403 403 PRO PRO A . n C 3 108 ALA 108 404 404 ALA ALA A . n C 3 109 GLN 109 405 405 GLN GLN A . n C 3 110 GLY 110 406 406 GLY GLY A . n C 3 111 VAL 111 407 407 VAL VAL A . n C 3 112 ASP 112 408 408 ASP ASP A . n C 3 113 ASP 113 409 409 ASP ASP A . n C 3 114 VAL 114 410 410 VAL VAL A . n C 3 115 ALA 115 411 411 ALA ALA A . n C 3 116 ALA 116 412 412 ALA ALA A . n C 3 117 ALA 117 413 413 ALA ALA A . n C 3 118 ALA 118 414 414 ALA ALA A . n C 3 119 LYS 119 415 415 LYS LYS A . n C 3 120 MET 120 416 416 MET MET A . n C 3 121 LYS 121 417 417 LYS LYS A . n C 3 122 GLN 122 418 418 GLN GLN A . n C 3 123 TYR 123 419 419 TYR TYR A . n C 3 124 GLU 124 420 420 GLU GLU A . n C 3 125 ALA 125 421 421 ALA ALA A . n C 3 126 VAL 126 422 422 VAL VAL A . n C 3 127 ARG 127 423 423 ARG ARG A . n C 3 128 PRO 128 424 424 PRO PRO A . n C 3 129 ASP 129 425 425 ASP ASP A . n C 3 130 GLU 130 426 426 GLU GLU A . n C 3 131 ALA 131 427 427 ALA ALA A . n C 3 132 VAL 132 428 428 VAL VAL A . n C 3 133 TYR 133 429 429 TYR TYR A . n C 3 134 GLY 134 430 430 GLY GLY A . n C 3 135 LYS 135 431 431 LYS LYS A . n C 3 136 GLY 136 432 432 GLY GLY A . n C 3 137 ALA 137 433 433 ALA ALA A . n C 3 138 LYS 138 434 434 LYS LYS A . n C 3 139 ARG 139 435 435 ARG ARG A . n C 3 140 ALA 140 436 436 ALA ALA A . n C 3 141 VAL 141 437 437 VAL VAL A . n C 3 142 PRO 142 438 438 PRO PRO A . n C 3 143 ASP 143 439 439 ASP ASP A . n C 3 144 GLU 144 440 440 GLU GLU A . n C 3 145 PRO 145 441 441 PRO PRO A . n C 3 146 VAL 146 442 442 VAL VAL A . n C 3 147 LEU 147 443 443 LEU LEU A . n C 3 148 ALA 148 444 444 ALA ALA A . n C 3 149 GLU 149 445 445 GLU GLU A . n C 3 150 HIS 150 446 446 HIS HIS A . n C 3 151 LEU 151 447 447 LEU LEU A . n C 3 152 VAL 152 448 448 VAL VAL A . n C 3 153 ARG 153 449 449 ARG ARG A . n C 3 154 LYS 154 450 450 LYS LYS A . n C 3 155 ALA 155 451 451 ALA ALA A . n C 3 156 ALA 156 452 452 ALA ALA A . n C 3 157 ALA 157 453 453 ALA ALA A . n C 3 158 ILE 158 454 454 ILE ILE A . n C 3 159 TRP 159 455 455 TRP TRP A . n C 3 160 GLU 160 456 456 GLU GLU A . n C 3 161 LEU 161 457 457 LEU LEU A . n C 3 162 GLU 162 458 458 GLU GLU A . n C 3 163 ARG 163 459 459 ARG ARG A . n C 3 164 PRO 164 460 460 PRO PRO A . n C 3 165 PHE 165 461 461 PHE PHE A . n C 3 166 LEU 166 462 462 LEU LEU A . n C 3 167 ASP 167 463 463 ASP ASP A . n C 3 168 GLU 168 464 464 GLU GLU A . n C 3 169 LEU 169 465 465 LEU LEU A . n C 3 170 ARG 170 466 466 ARG ARG A . n C 3 171 ARG 171 467 467 ARG ARG A . n C 3 172 ASN 172 468 468 ASN ASN A . n C 3 173 GLU 173 469 469 GLU GLU A . n C 3 174 GLN 174 470 470 GLN GLN A . n C 3 175 ASP 175 471 471 ASP ASP A . n C 3 176 ARG 176 472 472 ARG ARG A . n C 3 177 LEU 177 473 473 LEU LEU A . n C 3 178 LEU 178 474 474 LEU LEU A . n C 3 179 VAL 179 475 475 VAL VAL A . n C 3 180 GLU 180 476 476 GLU GLU A . n C 3 181 LEU 181 477 477 LEU LEU A . n C 3 182 GLU 182 478 478 GLU GLU A . n C 3 183 GLN 183 479 479 GLN GLN A . n C 3 184 PRO 184 480 480 PRO PRO A . n C 3 185 LEU 185 481 481 LEU LEU A . n C 3 186 SER 186 482 482 SER SER A . n C 3 187 SER 187 483 483 SER SER A . n C 3 188 ILE 188 484 484 ILE ILE A . n C 3 189 LEU 189 485 485 LEU LEU A . n C 3 190 ALA 190 486 486 ALA ALA A . n C 3 191 GLU 191 487 487 GLU GLU A . n C 3 192 MET 192 488 488 MET MET A . n C 3 193 GLU 193 489 489 GLU GLU A . n C 3 194 PHE 194 490 490 PHE PHE A . n C 3 195 ALA 195 491 491 ALA ALA A . n C 3 196 GLY 196 492 492 GLY GLY A . n C 3 197 VAL 197 493 493 VAL VAL A . n C 3 198 LYS 198 494 494 LYS LYS A . n C 3 199 VAL 199 495 495 VAL VAL A . n C 3 200 ASP 200 496 496 ASP ASP A . n C 3 201 THR 201 497 497 THR THR A . n C 3 202 LYS 202 498 498 LYS LYS A . n C 3 203 ARG 203 499 499 ARG ARG A . n C 3 204 LEU 204 500 500 LEU LEU A . n C 3 205 GLU 205 501 501 GLU GLU A . n C 3 206 GLN 206 502 502 GLN GLN A . n C 3 207 MET 207 503 503 MET MET A . n C 3 208 GLY 208 504 504 GLY GLY A . n C 3 209 LYS 209 505 505 LYS LYS A . n C 3 210 GLU 210 506 506 GLU GLU A . n C 3 211 LEU 211 507 507 LEU LEU A . n C 3 212 ALA 212 508 508 ALA ALA A . n C 3 213 GLU 213 509 509 GLU GLU A . n C 3 214 GLN 214 510 510 GLN GLN A . n C 3 215 LEU 215 511 511 LEU LEU A . n C 3 216 GLY 216 512 512 GLY GLY A . n C 3 217 THR 217 513 513 THR THR A . n C 3 218 VAL 218 514 514 VAL VAL A . n C 3 219 GLU 219 515 515 GLU GLU A . n C 3 220 GLN 220 516 516 GLN GLN A . n C 3 221 ARG 221 517 517 ARG ARG A . n C 3 222 ILE 222 518 518 ILE ILE A . n C 3 223 TYR 223 519 519 TYR TYR A . n C 3 224 GLU 224 520 520 GLU GLU A . n C 3 225 LEU 225 521 521 LEU LEU A . n C 3 226 ALA 226 522 522 ALA ALA A . n C 3 227 GLY 227 523 523 GLY GLY A . n C 3 228 GLN 228 524 524 GLN GLN A . n C 3 229 GLU 229 525 525 GLU GLU A . n C 3 230 PHE 230 526 526 PHE PHE A . n C 3 231 ASN 231 527 527 ASN ASN A . n C 3 232 ILE 232 528 528 ILE ILE A . n C 3 233 ASN 233 529 529 ASN ASN A . n C 3 234 SER 234 530 530 SER SER A . n C 3 235 PRO 235 531 531 PRO PRO A . n C 3 236 LYS 236 532 532 LYS LYS A . n C 3 237 GLN 237 533 533 GLN GLN A . n C 3 238 LEU 238 534 534 LEU LEU A . n C 3 239 GLY 239 535 535 GLY GLY A . n C 3 240 VAL 240 536 536 VAL VAL A . n C 3 241 ILE 241 537 537 ILE ILE A . n C 3 242 LEU 242 538 538 LEU LEU A . n C 3 243 PHE 243 539 539 PHE PHE A . n C 3 244 GLU 244 540 540 GLU GLU A . n C 3 245 LYS 245 541 541 LYS LYS A . n C 3 246 LEU 246 542 542 LEU LEU A . n C 3 247 GLN 247 543 543 GLN GLN A . n C 3 248 LEU 248 544 544 LEU LEU A . n C 3 249 PRO 249 545 545 PRO PRO A . n C 3 250 VAL 250 546 546 VAL VAL A . n C 3 251 LEU 251 547 547 LEU LEU A . n C 3 252 LYS 252 548 548 LYS LYS A . n C 3 253 LYS 253 549 549 LYS LYS A . n C 3 254 THR 254 550 550 THR THR A . n C 3 255 LYS 255 551 551 LYS LYS A . n C 3 256 THR 256 552 552 THR THR A . n C 3 257 GLY 257 553 553 GLY GLY A . n C 3 258 TYR 258 554 554 TYR TYR A . n C 3 259 SER 259 555 555 SER SER A . n C 3 260 THR 260 556 556 THR THR A . n C 3 261 SER 261 557 557 SER SER A . n C 3 262 ALA 262 558 558 ALA ALA A . n C 3 263 ASP 263 559 559 ASP ASP A . n C 3 264 VAL 264 560 560 VAL VAL A . n C 3 265 LEU 265 561 561 LEU LEU A . n C 3 266 GLU 266 562 562 GLU GLU A . n C 3 267 LYS 267 563 563 LYS LYS A . n C 3 268 LEU 268 564 564 LEU LEU A . n C 3 269 ALA 269 565 565 ALA ALA A . n C 3 270 PRO 270 566 566 PRO PRO A . n C 3 271 TYR 271 567 567 TYR TYR A . n C 3 272 HIS 272 568 568 HIS HIS A . n C 3 273 GLU 273 569 569 GLU GLU A . n C 3 274 ILE 274 570 570 ILE ILE A . n C 3 275 VAL 275 571 571 VAL VAL A . n C 3 276 GLU 276 572 572 GLU GLU A . n C 3 277 ASN 277 573 573 ASN ASN A . n C 3 278 ILE 278 574 574 ILE ILE A . n C 3 279 LEU 279 575 575 LEU LEU A . n C 3 280 HIS 280 576 576 HIS HIS A . n C 3 281 TYR 281 577 577 TYR TYR A . n C 3 282 ARG 282 578 578 ARG ARG A . n C 3 283 GLN 283 579 579 GLN GLN A . n C 3 284 LEU 284 580 580 LEU LEU A . n C 3 285 GLY 285 581 581 GLY GLY A . n C 3 286 LYS 286 582 582 LYS LYS A . n C 3 287 LEU 287 583 583 LEU LEU A . n C 3 288 GLN 288 584 584 GLN GLN A . n C 3 289 SER 289 585 585 SER SER A . n C 3 290 THR 290 586 586 THR THR A . n C 3 291 TYR 291 587 587 TYR TYR A . n C 3 292 ILE 292 588 588 ILE ILE A . n C 3 293 GLU 293 589 589 GLU GLU A . n C 3 294 GLY 294 590 590 GLY GLY A . n C 3 295 LEU 295 591 591 LEU LEU A . n C 3 296 LEU 296 592 592 LEU LEU A . n C 3 297 LYS 297 593 593 LYS LYS A . n C 3 298 VAL 298 594 594 VAL VAL A . n C 3 299 VAL 299 595 595 VAL VAL A . n C 3 300 ARG 300 596 596 ARG ARG A . n C 3 301 PRO 301 597 597 PRO PRO A . n C 3 302 ASP 302 598 598 ASP ASP A . n C 3 303 THR 303 599 599 THR THR A . n C 3 304 LYS 304 600 600 LYS LYS A . n C 3 305 LYS 305 601 601 LYS LYS A . n C 3 306 VAL 306 602 602 VAL VAL A . n C 3 307 HIS 307 603 603 HIS HIS A . n C 3 308 THR 308 604 604 THR THR A . n C 3 309 ILE 309 605 605 ILE ILE A . n C 3 310 PHE 310 606 606 PHE PHE A . n C 3 311 ASN 311 607 607 ASN ASN A . n C 3 312 GLN 312 608 608 GLN GLN A . n C 3 313 ALA 313 609 609 ALA ALA A . n C 3 314 LEU 314 610 610 LEU LEU A . n C 3 315 THR 315 611 611 THR THR A . n C 3 316 GLN 316 612 612 GLN GLN A . n C 3 317 THR 317 613 613 THR THR A . n C 3 318 GLY 318 614 614 GLY GLY A . n C 3 319 ARG 319 615 615 ARG ARG A . n C 3 320 LEU 320 616 616 LEU LEU A . n C 3 321 SER 321 617 617 SER SER A . n C 3 322 SER 322 618 618 SER SER A . n C 3 323 THR 323 619 619 THR THR A . n C 3 324 GLU 324 620 620 GLU GLU A . n C 3 325 PRO 325 621 621 PRO PRO A . n C 3 326 ASN 326 622 622 ASN ASN A . n C 3 327 LEU 327 623 623 LEU LEU A . n C 3 328 GLN 328 624 624 GLN GLN A . n C 3 329 ASN 329 625 625 ASN ASN A . n C 3 330 ILE 330 626 626 ILE ILE A . n C 3 331 PRO 331 627 627 PRO PRO A . n C 3 332 ILE 332 628 628 ILE ILE A . n C 3 333 ARG 333 629 629 ARG ARG A . n C 3 334 LEU 334 630 630 LEU LEU A . n C 3 335 GLU 335 631 631 GLU GLU A . n C 3 336 GLU 336 632 632 GLU GLU A . n C 3 337 GLY 337 633 633 GLY GLY A . n C 3 338 ARG 338 634 634 ARG ARG A . n C 3 339 LYS 339 635 635 LYS LYS A . n C 3 340 ILE 340 636 636 ILE ILE A . n C 3 341 ARG 341 637 637 ARG ARG A . n C 3 342 GLN 342 638 638 GLN GLN A . n C 3 343 ALA 343 639 639 ALA ALA A . n C 3 344 PHE 344 640 640 PHE PHE A . n C 3 345 VAL 345 641 641 VAL VAL A . n C 3 346 PRO 346 642 642 PRO PRO A . n C 3 347 SER 347 643 643 SER SER A . n C 3 348 GLU 348 644 644 GLU GLU A . n C 3 349 SER 349 645 645 SER SER A . n C 3 350 ASP 350 646 646 ASP ASP A . n C 3 351 TRP 351 647 647 TRP TRP A . n C 3 352 LEU 352 648 648 LEU LEU A . n C 3 353 ILE 353 649 649 ILE ILE A . n C 3 354 PHE 354 650 650 PHE PHE A . n C 3 355 ALA 355 651 651 ALA ALA A . n C 3 356 ALA 356 652 652 ALA ALA A . n C 3 357 ASP 357 653 653 ASP ASP A . n C 3 358 TYR 358 654 654 TYR TYR A . n C 3 359 SER 359 655 655 SER SER A . n C 3 360 GLN 360 656 656 GLN GLN A . n C 3 361 ILE 361 657 657 ILE ILE A . n C 3 362 GLU 362 658 658 GLU GLU A . n C 3 363 LEU 363 659 659 LEU LEU A . n C 3 364 ARG 364 660 660 ARG ARG A . n C 3 365 VAL 365 661 661 VAL VAL A . n C 3 366 LEU 366 662 662 LEU LEU A . n C 3 367 ALA 367 663 663 ALA ALA A . n C 3 368 HIS 368 664 664 HIS HIS A . n C 3 369 ILE 369 665 665 ILE ILE A . n C 3 370 ALA 370 666 666 ALA ALA A . n C 3 371 GLU 371 667 667 GLU GLU A . n C 3 372 ASP 372 668 668 ASP ASP A . n C 3 373 ASP 373 669 669 ASP ASP A . n C 3 374 ASN 374 670 670 ASN ASN A . n C 3 375 LEU 375 671 671 LEU LEU A . n C 3 376 MET 376 672 672 MET MET A . n C 3 377 GLU 377 673 673 GLU GLU A . n C 3 378 ALA 378 674 674 ALA ALA A . n C 3 379 PHE 379 675 675 PHE PHE A . n C 3 380 ARG 380 676 676 ARG ARG A . n C 3 381 ARG 381 677 677 ARG ARG A . n C 3 382 ASP 382 678 678 ASP ASP A . n C 3 383 LEU 383 679 679 LEU LEU A . n C 3 384 ASP 384 680 680 ASP ASP A . n C 3 385 ILE 385 681 681 ILE ILE A . n C 3 386 HIS 386 682 682 HIS HIS A . n C 3 387 THR 387 683 683 THR THR A . n C 3 388 LYS 388 684 684 LYS LYS A . n C 3 389 THR 389 685 685 THR THR A . n C 3 390 ALA 390 686 686 ALA ALA A . n C 3 391 MET 391 687 687 MET MET A . n C 3 392 ASP 392 688 688 ASP ASP A . n C 3 393 ILE 393 689 689 ILE ILE A . n C 3 394 PHE 394 690 690 PHE PHE A . n C 3 395 GLN 395 691 691 GLN GLN A . n C 3 396 VAL 396 692 692 VAL VAL A . n C 3 397 SER 397 693 693 SER SER A . n C 3 398 GLU 398 694 694 GLU GLU A . n C 3 399 ASP 399 695 695 ASP ASP A . n C 3 400 GLU 400 696 696 GLU GLU A . n C 3 401 VAL 401 697 697 VAL VAL A . n C 3 402 THR 402 698 698 THR THR A . n C 3 403 PRO 403 699 699 PRO PRO A . n C 3 404 ASN 404 700 700 ASN ASN A . n C 3 405 MET 405 701 701 MET MET A . n C 3 406 ARG 406 702 702 ARG ARG A . n C 3 407 ARG 407 703 703 ARG ARG A . n C 3 408 GLN 408 704 704 GLN GLN A . n C 3 409 ALA 409 705 705 ALA ALA A . n C 3 410 LYS 410 706 706 LYS LYS A . n C 3 411 ALA 411 707 707 ALA ALA A . n C 3 412 VAL 412 708 708 VAL VAL A . n C 3 413 ASN 413 709 709 ASN ASN A . n C 3 414 PHE 414 710 710 PHE PHE A . n C 3 415 GLY 415 711 711 GLY GLY A . n C 3 416 ILE 416 712 712 ILE ILE A . n C 3 417 VAL 417 713 713 VAL VAL A . n C 3 418 TYR 418 714 714 TYR TYR A . n C 3 419 GLY 419 715 715 GLY GLY A . n C 3 420 ILE 420 716 716 ILE ILE A . n C 3 421 SER 421 717 717 SER SER A . n C 3 422 ASP 422 718 718 ASP ASP A . n C 3 423 TYR 423 719 719 TYR TYR A . n C 3 424 GLY 424 720 720 GLY GLY A . n C 3 425 LEU 425 721 721 LEU LEU A . n C 3 426 ALA 426 722 722 ALA ALA A . n C 3 427 GLN 427 723 723 GLN GLN A . n C 3 428 ASN 428 724 724 ASN ASN A . n C 3 429 LEU 429 725 725 LEU LEU A . n C 3 430 ASN 430 726 726 ASN ASN A . n C 3 431 ILE 431 727 727 ILE ILE A . n C 3 432 SER 432 728 728 SER SER A . n C 3 433 ARG 433 729 729 ARG ARG A . n C 3 434 LYS 434 730 730 LYS LYS A . n C 3 435 GLU 435 731 731 GLU GLU A . n C 3 436 ALA 436 732 732 ALA ALA A . n C 3 437 ALA 437 733 733 ALA ALA A . n C 3 438 GLU 438 734 734 GLU GLU A . n C 3 439 PHE 439 735 735 PHE PHE A . n C 3 440 ILE 440 736 736 ILE ILE A . n C 3 441 GLU 441 737 737 GLU GLU A . n C 3 442 ARG 442 738 738 ARG ARG A . n C 3 443 TYR 443 739 739 TYR TYR A . n C 3 444 PHE 444 740 740 PHE PHE A . n C 3 445 GLU 445 741 741 GLU GLU A . n C 3 446 SER 446 742 742 SER SER A . n C 3 447 PHE 447 743 743 PHE PHE A . n C 3 448 PRO 448 744 744 PRO PRO A . n C 3 449 GLY 449 745 745 GLY GLY A . n C 3 450 VAL 450 746 746 VAL VAL A . n C 3 451 LYS 451 747 747 LYS LYS A . n C 3 452 ARG 452 748 748 ARG ARG A . n C 3 453 TYR 453 749 749 TYR TYR A . n C 3 454 MET 454 750 750 MET MET A . n C 3 455 GLU 455 751 751 GLU GLU A . n C 3 456 ASN 456 752 752 ASN ASN A . n C 3 457 ILE 457 753 753 ILE ILE A . n C 3 458 VAL 458 754 754 VAL VAL A . n C 3 459 GLN 459 755 755 GLN GLN A . n C 3 460 GLU 460 756 756 GLU GLU A . n C 3 461 ALA 461 757 757 ALA ALA A . n C 3 462 LYS 462 758 758 LYS LYS A . n C 3 463 GLN 463 759 759 GLN GLN A . n C 3 464 LYS 464 760 760 LYS LYS A . n C 3 465 GLY 465 761 761 GLY GLY A . n C 3 466 TYR 466 762 762 TYR TYR A . n C 3 467 VAL 467 763 763 VAL VAL A . n C 3 468 THR 468 764 764 THR THR A . n C 3 469 THR 469 765 765 THR THR A . n C 3 470 LEU 470 766 766 LEU LEU A . n C 3 471 LEU 471 767 767 LEU LEU A . n C 3 472 HIS 472 768 768 HIS HIS A . n C 3 473 ARG 473 769 769 ARG ARG A . n C 3 474 ARG 474 770 770 ARG ARG A . n C 3 475 ARG 475 771 771 ARG ARG A . n C 3 476 TYR 476 772 772 TYR TYR A . n C 3 477 LEU 477 773 773 LEU LEU A . n C 3 478 PRO 478 774 774 PRO PRO A . n C 3 479 ASP 479 775 775 ASP ASP A . n C 3 480 ILE 480 776 776 ILE ILE A . n C 3 481 THR 481 777 777 THR THR A . n C 3 482 SER 482 778 778 SER SER A . n C 3 483 ARG 483 779 779 ARG ARG A . n C 3 484 ASN 484 780 780 ASN ASN A . n C 3 485 PHE 485 781 781 PHE PHE A . n C 3 486 ASN 486 782 782 ASN ASN A . n C 3 487 VAL 487 783 783 VAL VAL A . n C 3 488 ARG 488 784 784 ARG ARG A . n C 3 489 SER 489 785 785 SER SER A . n C 3 490 PHE 490 786 786 PHE PHE A . n C 3 491 ALA 491 787 787 ALA ALA A . n C 3 492 GLU 492 788 788 GLU GLU A . n C 3 493 ARG 493 789 789 ARG ARG A . n C 3 494 MET 494 790 790 MET MET A . n C 3 495 ALA 495 791 791 ALA ALA A . n C 3 496 MET 496 792 792 MET MET A . n C 3 497 ASN 497 793 793 ASN ASN A . n C 3 498 THR 498 794 794 THR THR A . n C 3 499 PRO 499 795 795 PRO PRO A . n C 3 500 ILE 500 796 796 ILE ILE A . n C 3 501 GLN 501 797 797 GLN GLN A . n C 3 502 GLY 502 798 798 GLY GLY A . n C 3 503 SER 503 799 799 SER SER A . n C 3 504 ALA 504 800 800 ALA ALA A . n C 3 505 ALA 505 801 801 ALA ALA A . n C 3 506 ASP 506 802 802 ASP ASP A . n C 3 507 ILE 507 803 803 ILE ILE A . n C 3 508 ILE 508 804 804 ILE ILE A . n C 3 509 LYS 509 805 805 LYS LYS A . n C 3 510 LYS 510 806 806 LYS LYS A . n C 3 511 ALA 511 807 807 ALA ALA A . n C 3 512 MET 512 808 808 MET MET A . n C 3 513 ILE 513 809 809 ILE ILE A . n C 3 514 ASP 514 810 810 ASP ASP A . n C 3 515 LEU 515 811 811 LEU LEU A . n C 3 516 ASN 516 812 812 ASN ASN A . n C 3 517 ALA 517 813 813 ALA ALA A . n C 3 518 ARG 518 814 814 ARG ARG A . n C 3 519 LEU 519 815 815 LEU LEU A . n C 3 520 LYS 520 816 816 LYS LYS A . n C 3 521 GLU 521 817 817 GLU GLU A . n C 3 522 GLU 522 818 818 GLU GLU A . n C 3 523 ARG 523 819 819 ARG ARG A . n C 3 524 LEU 524 820 820 LEU LEU A . n C 3 525 GLN 525 821 821 GLN GLN A . n C 3 526 ALA 526 822 822 ALA ALA A . n C 3 527 HIS 527 823 823 HIS HIS A . n C 3 528 LEU 528 824 824 LEU LEU A . n C 3 529 LEU 529 825 825 LEU LEU A . n C 3 530 LEU 530 826 826 LEU LEU A . n C 3 531 GLN 531 827 827 GLN GLN A . n C 3 532 VAL 532 828 828 VAL VAL A . n C 3 533 HIS 533 829 829 HIS HIS A . n C 3 534 ASP 534 830 830 ASP ASP A . n C 3 535 GLU 535 831 831 GLU GLU A . n C 3 536 LEU 536 832 832 LEU LEU A . n C 3 537 ILE 537 833 833 ILE ILE A . n C 3 538 LEU 538 834 834 LEU LEU A . n C 3 539 GLU 539 835 835 GLU GLU A . n C 3 540 ALA 540 836 836 ALA ALA A . n C 3 541 PRO 541 837 837 PRO PRO A . n C 3 542 LYS 542 838 838 LYS LYS A . n C 3 543 GLU 543 839 839 GLU GLU A . n C 3 544 GLU 544 840 840 GLU GLU A . n C 3 545 MET 545 841 841 MET MET A . n C 3 546 GLU 546 842 842 GLU GLU A . n C 3 547 ARG 547 843 843 ARG ARG A . n C 3 548 LEU 548 844 844 LEU LEU A . n C 3 549 CYS 549 845 845 CYS CYS A . n C 3 550 ARG 550 846 846 ARG ARG A . n C 3 551 LEU 551 847 847 LEU LEU A . n C 3 552 VAL 552 848 848 VAL VAL A . n C 3 553 PRO 553 849 849 PRO PRO A . n C 3 554 GLU 554 850 850 GLU GLU A . n C 3 555 VAL 555 851 851 VAL VAL A . n C 3 556 MET 556 852 852 MET MET A . n C 3 557 GLU 557 853 853 GLU GLU A . n C 3 558 GLN 558 854 854 GLN GLN A . n C 3 559 ALA 559 855 855 ALA ALA A . n C 3 560 VAL 560 856 856 VAL VAL A . n C 3 561 THR 561 857 857 THR THR A . n C 3 562 LEU 562 858 858 LEU LEU A . n C 3 563 ARG 563 859 859 ARG ARG A . n C 3 564 VAL 564 860 860 VAL VAL A . n C 3 565 PRO 565 861 861 PRO PRO A . n C 3 566 LEU 566 862 862 LEU LEU A . n C 3 567 LYS 567 863 863 LYS LYS A . n C 3 568 VAL 568 864 864 VAL VAL A . n C 3 569 ASP 569 865 865 ASP ASP A . n C 3 570 TYR 570 866 866 TYR TYR A . n C 3 571 HIS 571 867 867 HIS HIS A . n C 3 572 TYR 572 868 868 TYR TYR A . n C 3 573 GLY 573 869 869 GLY GLY A . n C 3 574 SER 574 870 870 SER SER A . n C 3 575 THR 575 871 871 THR THR A . n C 3 576 TRP 576 872 872 TRP TRP A . n C 3 577 TYR 577 873 873 TYR TYR A . n C 3 578 ASP 578 874 874 ASP ASP A . n C 3 579 ALA 579 875 875 ALA ALA A . n C 3 580 LYS 580 876 876 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 MG 1 909 901 MG MG2 A . H 6 SO4 1 910 910 SO4 SO4 A . I 6 SO4 1 911 911 SO4 SO4 A . J 6 SO4 1 912 912 SO4 SO4 A . K 7 HOH 1 1049 1049 HOH WAT B . K 7 HOH 2 2130 2130 HOH WAT B . K 7 HOH 3 2147 2147 HOH WAT B . K 7 HOH 4 2908 2908 HOH WAT B . K 7 HOH 5 2910 2910 HOH WAT B . K 7 HOH 6 2911 2911 HOH WAT B . K 7 HOH 7 2930 2930 HOH WAT B . K 7 HOH 8 2934 2934 HOH WAT B . K 7 HOH 9 2944 2944 HOH WAT B . K 7 HOH 10 2965 2965 HOH WAT B . K 7 HOH 11 3019 3019 HOH WAT B . K 7 HOH 12 3025 3025 HOH WAT B . K 7 HOH 13 3063 3063 HOH WAT B . K 7 HOH 14 3070 3070 HOH WAT B . K 7 HOH 15 3075 3075 HOH WAT B . K 7 HOH 16 3078 3078 HOH WAT B . K 7 HOH 17 3082 3082 HOH WAT B . K 7 HOH 18 3095 3095 HOH WAT B . K 7 HOH 19 3174 3174 HOH WAT B . K 7 HOH 20 3253 3253 HOH WAT B . L 7 HOH 1 1010 1010 HOH WAT C . L 7 HOH 2 2161 2161 HOH WAT C . L 7 HOH 3 2291 2291 HOH WAT C . L 7 HOH 4 2845 2845 HOH WAT C . L 7 HOH 5 2909 2909 HOH WAT C . L 7 HOH 6 2916 2916 HOH WAT C . L 7 HOH 7 2918 2918 HOH WAT C . L 7 HOH 8 2922 2922 HOH WAT C . L 7 HOH 9 2926 2926 HOH WAT C . L 7 HOH 10 2928 2928 HOH WAT C . L 7 HOH 11 2956 2956 HOH WAT C . L 7 HOH 12 2962 2962 HOH WAT C . L 7 HOH 13 2975 2975 HOH WAT C . L 7 HOH 14 2984 2984 HOH WAT C . L 7 HOH 15 2993 2993 HOH WAT C . L 7 HOH 16 2999 2999 HOH WAT C . L 7 HOH 17 3001 3001 HOH WAT C . L 7 HOH 18 3022 3022 HOH WAT C . L 7 HOH 19 3023 3023 HOH WAT C . L 7 HOH 20 3030 3030 HOH WAT C . L 7 HOH 21 3035 3035 HOH WAT C . L 7 HOH 22 3036 3036 HOH WAT C . L 7 HOH 23 3050 3050 HOH WAT C . L 7 HOH 24 3069 3069 HOH WAT C . L 7 HOH 25 3072 3072 HOH WAT C . L 7 HOH 26 3074 3074 HOH WAT C . L 7 HOH 27 3088 3088 HOH WAT C . L 7 HOH 28 3103 3103 HOH WAT C . L 7 HOH 29 3121 3121 HOH WAT C . L 7 HOH 30 3126 3126 HOH WAT C . L 7 HOH 31 3140 3140 HOH WAT C . L 7 HOH 32 3152 3152 HOH WAT C . L 7 HOH 33 3155 3155 HOH WAT C . L 7 HOH 34 3161 3161 HOH WAT C . L 7 HOH 35 3171 3171 HOH WAT C . L 7 HOH 36 3176 3176 HOH WAT C . L 7 HOH 37 3189 3189 HOH WAT C . L 7 HOH 38 3225 3225 HOH WAT C . L 7 HOH 39 3226 3226 HOH WAT C . L 7 HOH 40 3239 3239 HOH WAT C . M 7 HOH 1 1004 1004 HOH WAT A . M 7 HOH 2 1008 1008 HOH WAT A . M 7 HOH 3 1009 1009 HOH WAT A . M 7 HOH 4 1013 1013 HOH WAT A . M 7 HOH 5 1016 1016 HOH WAT A . M 7 HOH 6 1017 1017 HOH WAT A . M 7 HOH 7 1028 1028 HOH WAT A . M 7 HOH 8 1030 1030 HOH WAT A . M 7 HOH 9 1031 1031 HOH WAT A . M 7 HOH 10 1032 1032 HOH WAT A . M 7 HOH 11 1033 1033 HOH WAT A . M 7 HOH 12 1034 1034 HOH WAT A . M 7 HOH 13 1035 1035 HOH WAT A . M 7 HOH 14 1039 1039 HOH WAT A . M 7 HOH 15 1040 1040 HOH WAT A . M 7 HOH 16 1041 1041 HOH WAT A . M 7 HOH 17 1042 1042 HOH WAT A . M 7 HOH 18 1045 1045 HOH WAT A . M 7 HOH 19 2002 2002 HOH WAT A . M 7 HOH 20 2003 2003 HOH WAT A . M 7 HOH 21 2004 2004 HOH WAT A . M 7 HOH 22 2005 2005 HOH WAT A . M 7 HOH 23 2006 2006 HOH WAT A . M 7 HOH 24 2007 2007 HOH WAT A . M 7 HOH 25 2008 2008 HOH WAT A . M 7 HOH 26 2010 2010 HOH WAT A . M 7 HOH 27 2011 2011 HOH WAT A . M 7 HOH 28 2012 2012 HOH WAT A . M 7 HOH 29 2013 2013 HOH WAT A . M 7 HOH 30 2016 2016 HOH WAT A . M 7 HOH 31 2018 2018 HOH WAT A . M 7 HOH 32 2019 2019 HOH WAT A . M 7 HOH 33 2020 2020 HOH WAT A . M 7 HOH 34 2021 2021 HOH WAT A . M 7 HOH 35 2022 2022 HOH WAT A . M 7 HOH 36 2023 2023 HOH WAT A . M 7 HOH 37 2024 2024 HOH WAT A . M 7 HOH 38 2025 2025 HOH WAT A . M 7 HOH 39 2026 2026 HOH WAT A . M 7 HOH 40 2028 2028 HOH WAT A . M 7 HOH 41 2029 2029 HOH WAT A . M 7 HOH 42 2031 2031 HOH WAT A . M 7 HOH 43 2033 2033 HOH WAT A . M 7 HOH 44 2034 2034 HOH WAT A . M 7 HOH 45 2035 2035 HOH WAT A . M 7 HOH 46 2037 2037 HOH WAT A . M 7 HOH 47 2038 2038 HOH WAT A . M 7 HOH 48 2040 2040 HOH WAT A . M 7 HOH 49 2041 2041 HOH WAT A . M 7 HOH 50 2045 2045 HOH WAT A . M 7 HOH 51 2046 2046 HOH WAT A . M 7 HOH 52 2048 2048 HOH WAT A . M 7 HOH 53 2051 2051 HOH WAT A . M 7 HOH 54 2053 2053 HOH WAT A . M 7 HOH 55 2055 2055 HOH WAT A . M 7 HOH 56 2056 2056 HOH WAT A . M 7 HOH 57 2057 2057 HOH WAT A . M 7 HOH 58 2058 2058 HOH WAT A . M 7 HOH 59 2059 2059 HOH WAT A . M 7 HOH 60 2101 2101 HOH WAT A . M 7 HOH 61 2102 2102 HOH WAT A . M 7 HOH 62 2103 2103 HOH WAT A . M 7 HOH 63 2105 2105 HOH WAT A . M 7 HOH 64 2109 2109 HOH WAT A . M 7 HOH 65 2110 2110 HOH WAT A . M 7 HOH 66 2111 2111 HOH WAT A . M 7 HOH 67 2112 2112 HOH WAT A . M 7 HOH 68 2115 2115 HOH WAT A . M 7 HOH 69 2116 2116 HOH WAT A . M 7 HOH 70 2121 2121 HOH WAT A . M 7 HOH 71 2123 2123 HOH WAT A . M 7 HOH 72 2132 2132 HOH WAT A . M 7 HOH 73 2135 2135 HOH WAT A . M 7 HOH 74 2139 2139 HOH WAT A . M 7 HOH 75 2140 2140 HOH WAT A . M 7 HOH 76 2145 2145 HOH WAT A . M 7 HOH 77 2146 2146 HOH WAT A . M 7 HOH 78 2148 2148 HOH WAT A . M 7 HOH 79 2149 2149 HOH WAT A . M 7 HOH 80 2154 2154 HOH WAT A . M 7 HOH 81 2156 2156 HOH WAT A . M 7 HOH 82 2157 2157 HOH WAT A . M 7 HOH 83 2159 2159 HOH WAT A . M 7 HOH 84 2160 2160 HOH WAT A . M 7 HOH 85 2163 2163 HOH WAT A . M 7 HOH 86 2167 2167 HOH WAT A . M 7 HOH 87 2171 2171 HOH WAT A . M 7 HOH 88 2187 2187 HOH WAT A . M 7 HOH 89 2188 2188 HOH WAT A . M 7 HOH 90 2194 2194 HOH WAT A . M 7 HOH 91 2203 2203 HOH WAT A . M 7 HOH 92 2204 2204 HOH WAT A . M 7 HOH 93 2214 2214 HOH WAT A . M 7 HOH 94 2229 2229 HOH WAT A . M 7 HOH 95 2234 2234 HOH WAT A . M 7 HOH 96 2242 2242 HOH WAT A . M 7 HOH 97 2248 2248 HOH WAT A . M 7 HOH 98 2250 2250 HOH WAT A . M 7 HOH 99 2253 2253 HOH WAT A . M 7 HOH 100 2254 2254 HOH WAT A . M 7 HOH 101 2255 2255 HOH WAT A . M 7 HOH 102 2256 2256 HOH WAT A . M 7 HOH 103 2264 2264 HOH WAT A . M 7 HOH 104 2266 2266 HOH WAT A . M 7 HOH 105 2302 2302 HOH WAT A . M 7 HOH 106 2303 2303 HOH WAT A . M 7 HOH 107 2304 2304 HOH WAT A . M 7 HOH 108 2308 2308 HOH WAT A . M 7 HOH 109 2313 2313 HOH WAT A . M 7 HOH 110 2321 2321 HOH WAT A . M 7 HOH 111 2322 2322 HOH WAT A . M 7 HOH 112 2326 2326 HOH WAT A . M 7 HOH 113 2327 2327 HOH WAT A . M 7 HOH 114 2328 2328 HOH WAT A . M 7 HOH 115 2329 2329 HOH WAT A . M 7 HOH 116 2340 2340 HOH WAT A . M 7 HOH 117 2341 2341 HOH WAT A . M 7 HOH 118 2358 2358 HOH WAT A . M 7 HOH 119 2363 2363 HOH WAT A . M 7 HOH 120 2366 2366 HOH WAT A . M 7 HOH 121 2373 2373 HOH WAT A . M 7 HOH 122 2377 2377 HOH WAT A . M 7 HOH 123 2378 2378 HOH WAT A . M 7 HOH 124 2380 2380 HOH WAT A . M 7 HOH 125 2392 2392 HOH WAT A . M 7 HOH 126 2403 2403 HOH WAT A . M 7 HOH 127 2405 2405 HOH WAT A . M 7 HOH 128 2407 2407 HOH WAT A . M 7 HOH 129 2408 2408 HOH WAT A . M 7 HOH 130 2414 2414 HOH WAT A . M 7 HOH 131 2419 2419 HOH WAT A . M 7 HOH 132 2422 2422 HOH WAT A . M 7 HOH 133 2424 2424 HOH WAT A . M 7 HOH 134 2429 2429 HOH WAT A . M 7 HOH 135 2430 2430 HOH WAT A . M 7 HOH 136 2431 2431 HOH WAT A . M 7 HOH 137 2462 2462 HOH WAT A . M 7 HOH 138 2463 2463 HOH WAT A . M 7 HOH 139 2504 2504 HOH WAT A . M 7 HOH 140 2506 2506 HOH WAT A . M 7 HOH 141 2514 2514 HOH WAT A . M 7 HOH 142 2540 2540 HOH WAT A . M 7 HOH 143 2562 2562 HOH WAT A . M 7 HOH 144 2577 2577 HOH WAT A . M 7 HOH 145 2639 2639 HOH WAT A . M 7 HOH 146 2646 2646 HOH WAT A . M 7 HOH 147 2670 2670 HOH WAT A . M 7 HOH 148 2691 2691 HOH WAT A . M 7 HOH 149 2697 2697 HOH WAT A . M 7 HOH 150 2734 2734 HOH WAT A . M 7 HOH 151 2744 2744 HOH WAT A . M 7 HOH 152 2768 2768 HOH WAT A . M 7 HOH 153 2771 2771 HOH WAT A . M 7 HOH 154 2772 2772 HOH WAT A . M 7 HOH 155 2774 2774 HOH WAT A . M 7 HOH 156 2775 2775 HOH WAT A . M 7 HOH 157 2784 2784 HOH WAT A . M 7 HOH 158 2788 2788 HOH WAT A . M 7 HOH 159 2789 2789 HOH WAT A . M 7 HOH 160 2790 2790 HOH WAT A . M 7 HOH 161 2791 2791 HOH WAT A . M 7 HOH 162 2792 2792 HOH WAT A . M 7 HOH 163 2793 2793 HOH WAT A . M 7 HOH 164 2795 2795 HOH WAT A . M 7 HOH 165 2796 2796 HOH WAT A . M 7 HOH 166 2797 2797 HOH WAT A . M 7 HOH 167 2800 2800 HOH WAT A . M 7 HOH 168 2801 2801 HOH WAT A . M 7 HOH 169 2803 2803 HOH WAT A . M 7 HOH 170 2805 2805 HOH WAT A . M 7 HOH 171 2807 2807 HOH WAT A . M 7 HOH 172 2809 2809 HOH WAT A . M 7 HOH 173 2810 2810 HOH WAT A . M 7 HOH 174 2811 2811 HOH WAT A . M 7 HOH 175 2815 2815 HOH WAT A . M 7 HOH 176 2816 2816 HOH WAT A . M 7 HOH 177 2820 2820 HOH WAT A . M 7 HOH 178 2821 2821 HOH WAT A . M 7 HOH 179 2823 2823 HOH WAT A . M 7 HOH 180 2826 2826 HOH WAT A . M 7 HOH 181 2827 2827 HOH WAT A . M 7 HOH 182 2829 2829 HOH WAT A . M 7 HOH 183 2830 2830 HOH WAT A . M 7 HOH 184 2832 2832 HOH WAT A . M 7 HOH 185 2833 2833 HOH WAT A . M 7 HOH 186 2835 2835 HOH WAT A . M 7 HOH 187 2836 2836 HOH WAT A . M 7 HOH 188 2837 2837 HOH WAT A . M 7 HOH 189 2839 2839 HOH WAT A . M 7 HOH 190 2844 2844 HOH WAT A . M 7 HOH 191 2846 2846 HOH WAT A . M 7 HOH 192 2849 2849 HOH WAT A . M 7 HOH 193 2854 2854 HOH WAT A . M 7 HOH 194 2861 2861 HOH WAT A . M 7 HOH 195 2864 2864 HOH WAT A . M 7 HOH 196 2867 2867 HOH WAT A . M 7 HOH 197 2868 2868 HOH WAT A . M 7 HOH 198 2869 2869 HOH WAT A . M 7 HOH 199 2870 2870 HOH WAT A . M 7 HOH 200 2871 2871 HOH WAT A . M 7 HOH 201 2874 2874 HOH WAT A . M 7 HOH 202 2875 2875 HOH WAT A . M 7 HOH 203 2877 2877 HOH WAT A . M 7 HOH 204 2900 2900 HOH WAT A . M 7 HOH 205 2901 2901 HOH WAT A . M 7 HOH 206 2902 2902 HOH WAT A . M 7 HOH 207 2903 2903 HOH WAT A . M 7 HOH 208 2904 2904 HOH WAT A . M 7 HOH 209 2905 2905 HOH WAT A . M 7 HOH 210 2906 2906 HOH WAT A . M 7 HOH 211 2907 2907 HOH WAT A . M 7 HOH 212 2912 2912 HOH WAT A . M 7 HOH 213 2913 2913 HOH WAT A . M 7 HOH 214 2914 2914 HOH WAT A . M 7 HOH 215 2915 2915 HOH WAT A . M 7 HOH 216 2919 2919 HOH WAT A . M 7 HOH 217 2920 2920 HOH WAT A . M 7 HOH 218 2921 2921 HOH WAT A . M 7 HOH 219 2923 2923 HOH WAT A . M 7 HOH 220 2924 2924 HOH WAT A . M 7 HOH 221 2925 2925 HOH WAT A . M 7 HOH 222 2927 2927 HOH WAT A . M 7 HOH 223 2929 2929 HOH WAT A . M 7 HOH 224 2932 2932 HOH WAT A . M 7 HOH 225 2933 2933 HOH WAT A . M 7 HOH 226 2935 2935 HOH WAT A . M 7 HOH 227 2936 2936 HOH WAT A . M 7 HOH 228 2937 2937 HOH WAT A . M 7 HOH 229 2938 2938 HOH WAT A . M 7 HOH 230 2939 2939 HOH WAT A . M 7 HOH 231 2941 2941 HOH WAT A . M 7 HOH 232 2942 2942 HOH WAT A . M 7 HOH 233 2943 2943 HOH WAT A . M 7 HOH 234 2945 2945 HOH WAT A . M 7 HOH 235 2947 2947 HOH WAT A . M 7 HOH 236 2948 2948 HOH WAT A . M 7 HOH 237 2949 2949 HOH WAT A . M 7 HOH 238 2950 2950 HOH WAT A . M 7 HOH 239 2951 2951 HOH WAT A . M 7 HOH 240 2952 2952 HOH WAT A . M 7 HOH 241 2953 2953 HOH WAT A . M 7 HOH 242 2954 2954 HOH WAT A . M 7 HOH 243 2957 2957 HOH WAT A . M 7 HOH 244 2958 2958 HOH WAT A . M 7 HOH 245 2959 2959 HOH WAT A . M 7 HOH 246 2960 2960 HOH WAT A . M 7 HOH 247 2961 2961 HOH WAT A . M 7 HOH 248 2963 2963 HOH WAT A . M 7 HOH 249 2966 2966 HOH WAT A . M 7 HOH 250 2969 2969 HOH WAT A . M 7 HOH 251 2970 2970 HOH WAT A . M 7 HOH 252 2972 2972 HOH WAT A . M 7 HOH 253 2973 2973 HOH WAT A . M 7 HOH 254 2974 2974 HOH WAT A . M 7 HOH 255 2976 2976 HOH WAT A . M 7 HOH 256 2977 2977 HOH WAT A . M 7 HOH 257 2980 2980 HOH WAT A . M 7 HOH 258 2982 2982 HOH WAT A . M 7 HOH 259 2983 2983 HOH WAT A . M 7 HOH 260 2986 2986 HOH WAT A . M 7 HOH 261 2988 2988 HOH WAT A . M 7 HOH 262 2992 2992 HOH WAT A . M 7 HOH 263 2994 2994 HOH WAT A . M 7 HOH 264 2995 2995 HOH WAT A . M 7 HOH 265 2997 2997 HOH WAT A . M 7 HOH 266 2998 2998 HOH WAT A . M 7 HOH 267 3000 3000 HOH WAT A . M 7 HOH 268 3003 3003 HOH WAT A . M 7 HOH 269 3004 3004 HOH WAT A . M 7 HOH 270 3005 3005 HOH WAT A . M 7 HOH 271 3007 3007 HOH WAT A . M 7 HOH 272 3008 3008 HOH WAT A . M 7 HOH 273 3009 3009 HOH WAT A . M 7 HOH 274 3010 3010 HOH WAT A . M 7 HOH 275 3011 3011 HOH WAT A . M 7 HOH 276 3013 3013 HOH WAT A . M 7 HOH 277 3014 3014 HOH WAT A . M 7 HOH 278 3016 3016 HOH WAT A . M 7 HOH 279 3018 3018 HOH WAT A . M 7 HOH 280 3020 3020 HOH WAT A . M 7 HOH 281 3021 3021 HOH WAT A . M 7 HOH 282 3024 3024 HOH WAT A . M 7 HOH 283 3026 3026 HOH WAT A . M 7 HOH 284 3027 3027 HOH WAT A . M 7 HOH 285 3028 3028 HOH WAT A . M 7 HOH 286 3029 3029 HOH WAT A . M 7 HOH 287 3031 3031 HOH WAT A . M 7 HOH 288 3032 3032 HOH WAT A . M 7 HOH 289 3033 3033 HOH WAT A . M 7 HOH 290 3034 3034 HOH WAT A . M 7 HOH 291 3037 3037 HOH WAT A . M 7 HOH 292 3038 3038 HOH WAT A . M 7 HOH 293 3039 3039 HOH WAT A . M 7 HOH 294 3041 3041 HOH WAT A . M 7 HOH 295 3042 3042 HOH WAT A . M 7 HOH 296 3043 3043 HOH WAT A . M 7 HOH 297 3044 3044 HOH WAT A . M 7 HOH 298 3045 3045 HOH WAT A . M 7 HOH 299 3046 3046 HOH WAT A . M 7 HOH 300 3047 3047 HOH WAT A . M 7 HOH 301 3048 3048 HOH WAT A . M 7 HOH 302 3049 3049 HOH WAT A . M 7 HOH 303 3051 3051 HOH WAT A . M 7 HOH 304 3052 3052 HOH WAT A . M 7 HOH 305 3053 3053 HOH WAT A . M 7 HOH 306 3054 3054 HOH WAT A . M 7 HOH 307 3055 3055 HOH WAT A . M 7 HOH 308 3056 3056 HOH WAT A . M 7 HOH 309 3057 3057 HOH WAT A . M 7 HOH 310 3058 3058 HOH WAT A . M 7 HOH 311 3059 3059 HOH WAT A . M 7 HOH 312 3060 3060 HOH WAT A . M 7 HOH 313 3061 3061 HOH WAT A . M 7 HOH 314 3062 3062 HOH WAT A . M 7 HOH 315 3064 3064 HOH WAT A . M 7 HOH 316 3065 3065 HOH WAT A . M 7 HOH 317 3066 3066 HOH WAT A . M 7 HOH 318 3067 3067 HOH WAT A . M 7 HOH 319 3068 3068 HOH WAT A . M 7 HOH 320 3071 3071 HOH WAT A . M 7 HOH 321 3073 3073 HOH WAT A . M 7 HOH 322 3076 3076 HOH WAT A . M 7 HOH 323 3077 3077 HOH WAT A . M 7 HOH 324 3079 3079 HOH WAT A . M 7 HOH 325 3080 3080 HOH WAT A . M 7 HOH 326 3081 3081 HOH WAT A . M 7 HOH 327 3083 3083 HOH WAT A . M 7 HOH 328 3084 3084 HOH WAT A . M 7 HOH 329 3085 3085 HOH WAT A . M 7 HOH 330 3086 3086 HOH WAT A . M 7 HOH 331 3087 3087 HOH WAT A . M 7 HOH 332 3089 3089 HOH WAT A . M 7 HOH 333 3091 3091 HOH WAT A . M 7 HOH 334 3092 3092 HOH WAT A . M 7 HOH 335 3093 3093 HOH WAT A . M 7 HOH 336 3094 3094 HOH WAT A . M 7 HOH 337 3096 3096 HOH WAT A . M 7 HOH 338 3097 3097 HOH WAT A . M 7 HOH 339 3099 3099 HOH WAT A . M 7 HOH 340 3100 3100 HOH WAT A . M 7 HOH 341 3101 3101 HOH WAT A . M 7 HOH 342 3102 3102 HOH WAT A . M 7 HOH 343 3104 3104 HOH WAT A . M 7 HOH 344 3105 3105 HOH WAT A . M 7 HOH 345 3106 3106 HOH WAT A . M 7 HOH 346 3107 3107 HOH WAT A . M 7 HOH 347 3109 3109 HOH WAT A . M 7 HOH 348 3110 3110 HOH WAT A . M 7 HOH 349 3111 3111 HOH WAT A . M 7 HOH 350 3112 3112 HOH WAT A . M 7 HOH 351 3113 3113 HOH WAT A . M 7 HOH 352 3114 3114 HOH WAT A . M 7 HOH 353 3115 3115 HOH WAT A . M 7 HOH 354 3116 3116 HOH WAT A . M 7 HOH 355 3117 3117 HOH WAT A . M 7 HOH 356 3118 3118 HOH WAT A . M 7 HOH 357 3119 3119 HOH WAT A . M 7 HOH 358 3120 3120 HOH WAT A . M 7 HOH 359 3122 3122 HOH WAT A . M 7 HOH 360 3123 3123 HOH WAT A . M 7 HOH 361 3124 3124 HOH WAT A . M 7 HOH 362 3125 3125 HOH WAT A . M 7 HOH 363 3127 3127 HOH WAT A . M 7 HOH 364 3128 3128 HOH WAT A . M 7 HOH 365 3129 3129 HOH WAT A . M 7 HOH 366 3130 3130 HOH WAT A . M 7 HOH 367 3131 3131 HOH WAT A . M 7 HOH 368 3132 3132 HOH WAT A . M 7 HOH 369 3133 3133 HOH WAT A . M 7 HOH 370 3134 3134 HOH WAT A . M 7 HOH 371 3135 3135 HOH WAT A . M 7 HOH 372 3136 3136 HOH WAT A . M 7 HOH 373 3137 3137 HOH WAT A . M 7 HOH 374 3138 3138 HOH WAT A . M 7 HOH 375 3141 3141 HOH WAT A . M 7 HOH 376 3142 3142 HOH WAT A . M 7 HOH 377 3143 3143 HOH WAT A . M 7 HOH 378 3145 3145 HOH WAT A . M 7 HOH 379 3146 3146 HOH WAT A . M 7 HOH 380 3148 3148 HOH WAT A . M 7 HOH 381 3149 3149 HOH WAT A . M 7 HOH 382 3150 3150 HOH WAT A . M 7 HOH 383 3151 3151 HOH WAT A . M 7 HOH 384 3153 3153 HOH WAT A . M 7 HOH 385 3154 3154 HOH WAT A . M 7 HOH 386 3156 3156 HOH WAT A . M 7 HOH 387 3157 3157 HOH WAT A . M 7 HOH 388 3158 3158 HOH WAT A . M 7 HOH 389 3159 3159 HOH WAT A . M 7 HOH 390 3160 3160 HOH WAT A . M 7 HOH 391 3162 3162 HOH WAT A . M 7 HOH 392 3163 3163 HOH WAT A . M 7 HOH 393 3164 3164 HOH WAT A . M 7 HOH 394 3165 3165 HOH WAT A . M 7 HOH 395 3166 3166 HOH WAT A . M 7 HOH 396 3167 3167 HOH WAT A . M 7 HOH 397 3168 3168 HOH WAT A . M 7 HOH 398 3169 3169 HOH WAT A . M 7 HOH 399 3170 3170 HOH WAT A . M 7 HOH 400 3172 3172 HOH WAT A . M 7 HOH 401 3175 3175 HOH WAT A . M 7 HOH 402 3177 3177 HOH WAT A . M 7 HOH 403 3178 3178 HOH WAT A . M 7 HOH 404 3179 3179 HOH WAT A . M 7 HOH 405 3180 3180 HOH WAT A . M 7 HOH 406 3181 3181 HOH WAT A . M 7 HOH 407 3182 3182 HOH WAT A . M 7 HOH 408 3183 3183 HOH WAT A . M 7 HOH 409 3184 3184 HOH WAT A . M 7 HOH 410 3185 3185 HOH WAT A . M 7 HOH 411 3186 3186 HOH WAT A . M 7 HOH 412 3187 3187 HOH WAT A . M 7 HOH 413 3188 3188 HOH WAT A . M 7 HOH 414 3190 3190 HOH WAT A . M 7 HOH 415 3191 3191 HOH WAT A . M 7 HOH 416 3192 3192 HOH WAT A . M 7 HOH 417 3193 3193 HOH WAT A . M 7 HOH 418 3194 3194 HOH WAT A . M 7 HOH 419 3195 3195 HOH WAT A . M 7 HOH 420 3196 3196 HOH WAT A . M 7 HOH 421 3197 3197 HOH WAT A . M 7 HOH 422 3198 3198 HOH WAT A . M 7 HOH 423 3199 3199 HOH WAT A . M 7 HOH 424 3200 3200 HOH WAT A . M 7 HOH 425 3201 3201 HOH WAT A . M 7 HOH 426 3202 3202 HOH WAT A . M 7 HOH 427 3205 3205 HOH WAT A . M 7 HOH 428 3206 3206 HOH WAT A . M 7 HOH 429 3207 3207 HOH WAT A . M 7 HOH 430 3208 3208 HOH WAT A . M 7 HOH 431 3209 3209 HOH WAT A . M 7 HOH 432 3210 3210 HOH WAT A . M 7 HOH 433 3211 3211 HOH WAT A . M 7 HOH 434 3212 3212 HOH WAT A . M 7 HOH 435 3213 3213 HOH WAT A . M 7 HOH 436 3214 3214 HOH WAT A . M 7 HOH 437 3215 3215 HOH WAT A . M 7 HOH 438 3216 3216 HOH WAT A . M 7 HOH 439 3217 3217 HOH WAT A . M 7 HOH 440 3218 3218 HOH WAT A . M 7 HOH 441 3219 3219 HOH WAT A . M 7 HOH 442 3220 3220 HOH WAT A . M 7 HOH 443 3221 3221 HOH WAT A . M 7 HOH 444 3222 3222 HOH WAT A . M 7 HOH 445 3223 3223 HOH WAT A . M 7 HOH 446 3224 3224 HOH WAT A . M 7 HOH 447 3227 3227 HOH WAT A . M 7 HOH 448 3228 3228 HOH WAT A . M 7 HOH 449 3229 3229 HOH WAT A . M 7 HOH 450 3231 3231 HOH WAT A . M 7 HOH 451 3232 3232 HOH WAT A . M 7 HOH 452 3233 3233 HOH WAT A . M 7 HOH 453 3234 3234 HOH WAT A . M 7 HOH 454 3235 3235 HOH WAT A . M 7 HOH 455 3236 3236 HOH WAT A . M 7 HOH 456 3237 3237 HOH WAT A . M 7 HOH 457 3238 3238 HOH WAT A . M 7 HOH 458 3240 3240 HOH WAT A . M 7 HOH 459 3241 3241 HOH WAT A . M 7 HOH 460 3242 3242 HOH WAT A . M 7 HOH 461 3244 3244 HOH WAT A . M 7 HOH 462 3245 3245 HOH WAT A . M 7 HOH 463 3246 3246 HOH WAT A . M 7 HOH 464 3247 3247 HOH WAT A . M 7 HOH 465 3248 3248 HOH WAT A . M 7 HOH 466 3250 3250 HOH WAT A . M 7 HOH 467 3252 3252 HOH WAT A . M 7 HOH 468 3254 3254 HOH WAT A . M 7 HOH 469 3255 3255 HOH WAT A . M 7 HOH 470 3256 3256 HOH WAT A . M 7 HOH 471 3257 3257 HOH WAT A . M 7 HOH 472 3258 3258 HOH WAT A . # _pdbx_molecule_features.prd_id PRD_900003 _pdbx_molecule_features.name sucrose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_900003 D 2 PRD_900003 E 3 PRD_900003 F # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? C ASP 357 ? A ASP 653 ? 1_555 MG ? G MG . ? A MG 909 ? 1_555 O ? C TYR 358 ? A TYR 654 ? 1_555 77.0 ? 2 OD2 ? C ASP 357 ? A ASP 653 ? 1_555 MG ? G MG . ? A MG 909 ? 1_555 OD2 ? C ASP 534 ? A ASP 830 ? 1_555 125.7 ? 3 O ? C TYR 358 ? A TYR 654 ? 1_555 MG ? G MG . ? A MG 909 ? 1_555 OD2 ? C ASP 534 ? A ASP 830 ? 1_555 76.2 ? 4 OD2 ? C ASP 357 ? A ASP 653 ? 1_555 MG ? G MG . ? A MG 909 ? 1_555 O ? M HOH . ? A HOH 2801 ? 1_555 115.7 ? 5 O ? C TYR 358 ? A TYR 654 ? 1_555 MG ? G MG . ? A MG 909 ? 1_555 O ? M HOH . ? A HOH 2801 ? 1_555 78.1 ? 6 OD2 ? C ASP 534 ? A ASP 830 ? 1_555 MG ? G MG . ? A MG 909 ? 1_555 O ? M HOH . ? A HOH 2801 ? 1_555 103.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-03-30 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-08-16 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Refinement description' 11 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' entity_name_com 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_molecule_features 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' pdbx_struct_conn_angle 15 4 'Structure model' struct_asym 16 4 'Structure model' struct_conn 17 4 'Structure model' struct_conn_type 18 4 'Structure model' struct_site 19 4 'Structure model' struct_site_gen 20 5 'Structure model' chem_comp 21 5 'Structure model' chem_comp_atom 22 5 'Structure model' chem_comp_bond 23 5 'Structure model' database_2 24 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.B_iso_or_equiv' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_asym_id' 6 4 'Structure model' '_atom_site.auth_atom_id' 7 4 'Structure model' '_atom_site.auth_comp_id' 8 4 'Structure model' '_atom_site.auth_seq_id' 9 4 'Structure model' '_atom_site.label_asym_id' 10 4 'Structure model' '_atom_site.label_atom_id' 11 4 'Structure model' '_atom_site.label_comp_id' 12 4 'Structure model' '_atom_site.label_entity_id' 13 4 'Structure model' '_atom_site.type_symbol' 14 4 'Structure model' '_chem_comp.formula' 15 4 'Structure model' '_chem_comp.formula_weight' 16 4 'Structure model' '_chem_comp.id' 17 4 'Structure model' '_chem_comp.mon_nstd_flag' 18 4 'Structure model' '_chem_comp.name' 19 4 'Structure model' '_chem_comp.type' 20 4 'Structure model' '_entity.formula_weight' 21 4 'Structure model' '_entity.pdbx_description' 22 4 'Structure model' '_entity.pdbx_number_of_molecules' 23 4 'Structure model' '_entity.type' 24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 27 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 28 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 29 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 30 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 31 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 32 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 33 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 34 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 35 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 36 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 37 4 'Structure model' '_pdbx_struct_conn_angle.value' 38 4 'Structure model' '_struct_asym.entity_id' 39 5 'Structure model' '_chem_comp.pdbx_synonyms' 40 5 'Structure model' '_database_2.pdbx_DOI' 41 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _pdbx_entry_details.entry_id 1NK8 _pdbx_entry_details.compound_details ;THE POLYMERASE ADOPTS A DISTORTED OPEN CONFORMATION WITH A GUANINE-THYMINE MISMATCH BOUND AT THE N-2 POSITION. THE MISMATCH ADOPTS A WOBBLE CONFORMATION. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 298 ? ? -44.89 154.51 2 1 ASP A 372 ? ? 64.16 62.06 3 1 ASP A 402 ? ? -165.11 94.53 4 1 ALA A 421 ? ? -85.14 42.08 5 1 LEU A 477 ? ? -116.46 -70.97 6 1 ILE A 588 ? ? -101.68 -63.39 7 1 LEU A 610 ? ? -122.62 -59.93 8 1 ILE A 628 ? ? -156.31 -28.46 9 1 HIS A 829 ? ? 70.80 -56.19 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C DC 3 ? P ? B DC 4 P 2 1 Y 1 C DC 3 ? OP1 ? B DC 4 OP1 3 1 Y 1 C DC 3 ? OP2 ? B DC 4 OP2 4 1 Y 1 A LYS 298 ? CG ? C LYS 2 CG 5 1 Y 1 A LYS 298 ? CD ? C LYS 2 CD 6 1 Y 1 A LYS 298 ? CE ? C LYS 2 CE 7 1 Y 1 A LYS 298 ? NZ ? C LYS 2 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C DG 0 ? B DG 1 2 1 Y 1 C DT 1 ? B DT 2 3 1 Y 1 C DA 2 ? B DA 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 FRU C1 C N N 231 FRU C2 C N R 232 FRU C3 C N S 233 FRU C4 C N S 234 FRU C5 C N R 235 FRU C6 C N N 236 FRU O1 O N N 237 FRU O2 O N N 238 FRU O3 O N N 239 FRU O4 O N N 240 FRU O5 O N N 241 FRU O6 O N N 242 FRU H11 H N N 243 FRU H12 H N N 244 FRU H3 H N N 245 FRU H4 H N N 246 FRU H5 H N N 247 FRU H61 H N N 248 FRU H62 H N N 249 FRU HO1 H N N 250 FRU HO2 H N N 251 FRU HO3 H N N 252 FRU HO4 H N N 253 FRU HO6 H N N 254 GLC C1 C N S 255 GLC C2 C N R 256 GLC C3 C N S 257 GLC C4 C N S 258 GLC C5 C N R 259 GLC C6 C N N 260 GLC O1 O N N 261 GLC O2 O N N 262 GLC O3 O N N 263 GLC O4 O N N 264 GLC O5 O N N 265 GLC O6 O N N 266 GLC H1 H N N 267 GLC H2 H N N 268 GLC H3 H N N 269 GLC H4 H N N 270 GLC H5 H N N 271 GLC H61 H N N 272 GLC H62 H N N 273 GLC HO1 H N N 274 GLC HO2 H N N 275 GLC HO3 H N N 276 GLC HO4 H N N 277 GLC HO6 H N N 278 GLN N N N N 279 GLN CA C N S 280 GLN C C N N 281 GLN O O N N 282 GLN CB C N N 283 GLN CG C N N 284 GLN CD C N N 285 GLN OE1 O N N 286 GLN NE2 N N N 287 GLN OXT O N N 288 GLN H H N N 289 GLN H2 H N N 290 GLN HA H N N 291 GLN HB2 H N N 292 GLN HB3 H N N 293 GLN HG2 H N N 294 GLN HG3 H N N 295 GLN HE21 H N N 296 GLN HE22 H N N 297 GLN HXT H N N 298 GLU N N N N 299 GLU CA C N S 300 GLU C C N N 301 GLU O O N N 302 GLU CB C N N 303 GLU CG C N N 304 GLU CD C N N 305 GLU OE1 O N N 306 GLU OE2 O N N 307 GLU OXT O N N 308 GLU H H N N 309 GLU H2 H N N 310 GLU HA H N N 311 GLU HB2 H N N 312 GLU HB3 H N N 313 GLU HG2 H N N 314 GLU HG3 H N N 315 GLU HE2 H N N 316 GLU HXT H N N 317 GLY N N N N 318 GLY CA C N N 319 GLY C C N N 320 GLY O O N N 321 GLY OXT O N N 322 GLY H H N N 323 GLY H2 H N N 324 GLY HA2 H N N 325 GLY HA3 H N N 326 GLY HXT H N N 327 HIS N N N N 328 HIS CA C N S 329 HIS C C N N 330 HIS O O N N 331 HIS CB C N N 332 HIS CG C Y N 333 HIS ND1 N Y N 334 HIS CD2 C Y N 335 HIS CE1 C Y N 336 HIS NE2 N Y N 337 HIS OXT O N N 338 HIS H H N N 339 HIS H2 H N N 340 HIS HA H N N 341 HIS HB2 H N N 342 HIS HB3 H N N 343 HIS HD1 H N N 344 HIS HD2 H N N 345 HIS HE1 H N N 346 HIS HE2 H N N 347 HIS HXT H N N 348 HOH O O N N 349 HOH H1 H N N 350 HOH H2 H N N 351 ILE N N N N 352 ILE CA C N S 353 ILE C C N N 354 ILE O O N N 355 ILE CB C N S 356 ILE CG1 C N N 357 ILE CG2 C N N 358 ILE CD1 C N N 359 ILE OXT O N N 360 ILE H H N N 361 ILE H2 H N N 362 ILE HA H N N 363 ILE HB H N N 364 ILE HG12 H N N 365 ILE HG13 H N N 366 ILE HG21 H N N 367 ILE HG22 H N N 368 ILE HG23 H N N 369 ILE HD11 H N N 370 ILE HD12 H N N 371 ILE HD13 H N N 372 ILE HXT H N N 373 LEU N N N N 374 LEU CA C N S 375 LEU C C N N 376 LEU O O N N 377 LEU CB C N N 378 LEU CG C N N 379 LEU CD1 C N N 380 LEU CD2 C N N 381 LEU OXT O N N 382 LEU H H N N 383 LEU H2 H N N 384 LEU HA H N N 385 LEU HB2 H N N 386 LEU HB3 H N N 387 LEU HG H N N 388 LEU HD11 H N N 389 LEU HD12 H N N 390 LEU HD13 H N N 391 LEU HD21 H N N 392 LEU HD22 H N N 393 LEU HD23 H N N 394 LEU HXT H N N 395 LYS N N N N 396 LYS CA C N S 397 LYS C C N N 398 LYS O O N N 399 LYS CB C N N 400 LYS CG C N N 401 LYS CD C N N 402 LYS CE C N N 403 LYS NZ N N N 404 LYS OXT O N N 405 LYS H H N N 406 LYS H2 H N N 407 LYS HA H N N 408 LYS HB2 H N N 409 LYS HB3 H N N 410 LYS HG2 H N N 411 LYS HG3 H N N 412 LYS HD2 H N N 413 LYS HD3 H N N 414 LYS HE2 H N N 415 LYS HE3 H N N 416 LYS HZ1 H N N 417 LYS HZ2 H N N 418 LYS HZ3 H N N 419 LYS HXT H N N 420 MET N N N N 421 MET CA C N S 422 MET C C N N 423 MET O O N N 424 MET CB C N N 425 MET CG C N N 426 MET SD S N N 427 MET CE C N N 428 MET OXT O N N 429 MET H H N N 430 MET H2 H N N 431 MET HA H N N 432 MET HB2 H N N 433 MET HB3 H N N 434 MET HG2 H N N 435 MET HG3 H N N 436 MET HE1 H N N 437 MET HE2 H N N 438 MET HE3 H N N 439 MET HXT H N N 440 MG MG MG N N 441 PHE N N N N 442 PHE CA C N S 443 PHE C C N N 444 PHE O O N N 445 PHE CB C N N 446 PHE CG C Y N 447 PHE CD1 C Y N 448 PHE CD2 C Y N 449 PHE CE1 C Y N 450 PHE CE2 C Y N 451 PHE CZ C Y N 452 PHE OXT O N N 453 PHE H H N N 454 PHE H2 H N N 455 PHE HA H N N 456 PHE HB2 H N N 457 PHE HB3 H N N 458 PHE HD1 H N N 459 PHE HD2 H N N 460 PHE HE1 H N N 461 PHE HE2 H N N 462 PHE HZ H N N 463 PHE HXT H N N 464 PRO N N N N 465 PRO CA C N S 466 PRO C C N N 467 PRO O O N N 468 PRO CB C N N 469 PRO CG C N N 470 PRO CD C N N 471 PRO OXT O N N 472 PRO H H N N 473 PRO HA H N N 474 PRO HB2 H N N 475 PRO HB3 H N N 476 PRO HG2 H N N 477 PRO HG3 H N N 478 PRO HD2 H N N 479 PRO HD3 H N N 480 PRO HXT H N N 481 SER N N N N 482 SER CA C N S 483 SER C C N N 484 SER O O N N 485 SER CB C N N 486 SER OG O N N 487 SER OXT O N N 488 SER H H N N 489 SER H2 H N N 490 SER HA H N N 491 SER HB2 H N N 492 SER HB3 H N N 493 SER HG H N N 494 SER HXT H N N 495 SO4 S S N N 496 SO4 O1 O N N 497 SO4 O2 O N N 498 SO4 O3 O N N 499 SO4 O4 O N N 500 THR N N N N 501 THR CA C N S 502 THR C C N N 503 THR O O N N 504 THR CB C N R 505 THR OG1 O N N 506 THR CG2 C N N 507 THR OXT O N N 508 THR H H N N 509 THR H2 H N N 510 THR HA H N N 511 THR HB H N N 512 THR HG1 H N N 513 THR HG21 H N N 514 THR HG22 H N N 515 THR HG23 H N N 516 THR HXT H N N 517 TRP N N N N 518 TRP CA C N S 519 TRP C C N N 520 TRP O O N N 521 TRP CB C N N 522 TRP CG C Y N 523 TRP CD1 C Y N 524 TRP CD2 C Y N 525 TRP NE1 N Y N 526 TRP CE2 C Y N 527 TRP CE3 C Y N 528 TRP CZ2 C Y N 529 TRP CZ3 C Y N 530 TRP CH2 C Y N 531 TRP OXT O N N 532 TRP H H N N 533 TRP H2 H N N 534 TRP HA H N N 535 TRP HB2 H N N 536 TRP HB3 H N N 537 TRP HD1 H N N 538 TRP HE1 H N N 539 TRP HE3 H N N 540 TRP HZ2 H N N 541 TRP HZ3 H N N 542 TRP HH2 H N N 543 TRP HXT H N N 544 TYR N N N N 545 TYR CA C N S 546 TYR C C N N 547 TYR O O N N 548 TYR CB C N N 549 TYR CG C Y N 550 TYR CD1 C Y N 551 TYR CD2 C Y N 552 TYR CE1 C Y N 553 TYR CE2 C Y N 554 TYR CZ C Y N 555 TYR OH O N N 556 TYR OXT O N N 557 TYR H H N N 558 TYR H2 H N N 559 TYR HA H N N 560 TYR HB2 H N N 561 TYR HB3 H N N 562 TYR HD1 H N N 563 TYR HD2 H N N 564 TYR HE1 H N N 565 TYR HE2 H N N 566 TYR HH H N N 567 TYR HXT H N N 568 VAL N N N N 569 VAL CA C N S 570 VAL C C N N 571 VAL O O N N 572 VAL CB C N N 573 VAL CG1 C N N 574 VAL CG2 C N N 575 VAL OXT O N N 576 VAL H H N N 577 VAL H2 H N N 578 VAL HA H N N 579 VAL HB H N N 580 VAL HG11 H N N 581 VAL HG12 H N N 582 VAL HG13 H N N 583 VAL HG21 H N N 584 VAL HG22 H N N 585 VAL HG23 H N N 586 VAL HXT H N N 587 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 FRU C1 C2 sing N N 232 FRU C1 O1 sing N N 233 FRU C1 H11 sing N N 234 FRU C1 H12 sing N N 235 FRU C2 C3 sing N N 236 FRU C2 O2 sing N N 237 FRU C2 O5 sing N N 238 FRU C3 C4 sing N N 239 FRU C3 O3 sing N N 240 FRU C3 H3 sing N N 241 FRU C4 C5 sing N N 242 FRU C4 O4 sing N N 243 FRU C4 H4 sing N N 244 FRU C5 C6 sing N N 245 FRU C5 O5 sing N N 246 FRU C5 H5 sing N N 247 FRU C6 O6 sing N N 248 FRU C6 H61 sing N N 249 FRU C6 H62 sing N N 250 FRU O1 HO1 sing N N 251 FRU O2 HO2 sing N N 252 FRU O3 HO3 sing N N 253 FRU O4 HO4 sing N N 254 FRU O6 HO6 sing N N 255 GLC C1 C2 sing N N 256 GLC C1 O1 sing N N 257 GLC C1 O5 sing N N 258 GLC C1 H1 sing N N 259 GLC C2 C3 sing N N 260 GLC C2 O2 sing N N 261 GLC C2 H2 sing N N 262 GLC C3 C4 sing N N 263 GLC C3 O3 sing N N 264 GLC C3 H3 sing N N 265 GLC C4 C5 sing N N 266 GLC C4 O4 sing N N 267 GLC C4 H4 sing N N 268 GLC C5 C6 sing N N 269 GLC C5 O5 sing N N 270 GLC C5 H5 sing N N 271 GLC C6 O6 sing N N 272 GLC C6 H61 sing N N 273 GLC C6 H62 sing N N 274 GLC O1 HO1 sing N N 275 GLC O2 HO2 sing N N 276 GLC O3 HO3 sing N N 277 GLC O4 HO4 sing N N 278 GLC O6 HO6 sing N N 279 GLN N CA sing N N 280 GLN N H sing N N 281 GLN N H2 sing N N 282 GLN CA C sing N N 283 GLN CA CB sing N N 284 GLN CA HA sing N N 285 GLN C O doub N N 286 GLN C OXT sing N N 287 GLN CB CG sing N N 288 GLN CB HB2 sing N N 289 GLN CB HB3 sing N N 290 GLN CG CD sing N N 291 GLN CG HG2 sing N N 292 GLN CG HG3 sing N N 293 GLN CD OE1 doub N N 294 GLN CD NE2 sing N N 295 GLN NE2 HE21 sing N N 296 GLN NE2 HE22 sing N N 297 GLN OXT HXT sing N N 298 GLU N CA sing N N 299 GLU N H sing N N 300 GLU N H2 sing N N 301 GLU CA C sing N N 302 GLU CA CB sing N N 303 GLU CA HA sing N N 304 GLU C O doub N N 305 GLU C OXT sing N N 306 GLU CB CG sing N N 307 GLU CB HB2 sing N N 308 GLU CB HB3 sing N N 309 GLU CG CD sing N N 310 GLU CG HG2 sing N N 311 GLU CG HG3 sing N N 312 GLU CD OE1 doub N N 313 GLU CD OE2 sing N N 314 GLU OE2 HE2 sing N N 315 GLU OXT HXT sing N N 316 GLY N CA sing N N 317 GLY N H sing N N 318 GLY N H2 sing N N 319 GLY CA C sing N N 320 GLY CA HA2 sing N N 321 GLY CA HA3 sing N N 322 GLY C O doub N N 323 GLY C OXT sing N N 324 GLY OXT HXT sing N N 325 HIS N CA sing N N 326 HIS N H sing N N 327 HIS N H2 sing N N 328 HIS CA C sing N N 329 HIS CA CB sing N N 330 HIS CA HA sing N N 331 HIS C O doub N N 332 HIS C OXT sing N N 333 HIS CB CG sing N N 334 HIS CB HB2 sing N N 335 HIS CB HB3 sing N N 336 HIS CG ND1 sing Y N 337 HIS CG CD2 doub Y N 338 HIS ND1 CE1 doub Y N 339 HIS ND1 HD1 sing N N 340 HIS CD2 NE2 sing Y N 341 HIS CD2 HD2 sing N N 342 HIS CE1 NE2 sing Y N 343 HIS CE1 HE1 sing N N 344 HIS NE2 HE2 sing N N 345 HIS OXT HXT sing N N 346 HOH O H1 sing N N 347 HOH O H2 sing N N 348 ILE N CA sing N N 349 ILE N H sing N N 350 ILE N H2 sing N N 351 ILE CA C sing N N 352 ILE CA CB sing N N 353 ILE CA HA sing N N 354 ILE C O doub N N 355 ILE C OXT sing N N 356 ILE CB CG1 sing N N 357 ILE CB CG2 sing N N 358 ILE CB HB sing N N 359 ILE CG1 CD1 sing N N 360 ILE CG1 HG12 sing N N 361 ILE CG1 HG13 sing N N 362 ILE CG2 HG21 sing N N 363 ILE CG2 HG22 sing N N 364 ILE CG2 HG23 sing N N 365 ILE CD1 HD11 sing N N 366 ILE CD1 HD12 sing N N 367 ILE CD1 HD13 sing N N 368 ILE OXT HXT sing N N 369 LEU N CA sing N N 370 LEU N H sing N N 371 LEU N H2 sing N N 372 LEU CA C sing N N 373 LEU CA CB sing N N 374 LEU CA HA sing N N 375 LEU C O doub N N 376 LEU C OXT sing N N 377 LEU CB CG sing N N 378 LEU CB HB2 sing N N 379 LEU CB HB3 sing N N 380 LEU CG CD1 sing N N 381 LEU CG CD2 sing N N 382 LEU CG HG sing N N 383 LEU CD1 HD11 sing N N 384 LEU CD1 HD12 sing N N 385 LEU CD1 HD13 sing N N 386 LEU CD2 HD21 sing N N 387 LEU CD2 HD22 sing N N 388 LEU CD2 HD23 sing N N 389 LEU OXT HXT sing N N 390 LYS N CA sing N N 391 LYS N H sing N N 392 LYS N H2 sing N N 393 LYS CA C sing N N 394 LYS CA CB sing N N 395 LYS CA HA sing N N 396 LYS C O doub N N 397 LYS C OXT sing N N 398 LYS CB CG sing N N 399 LYS CB HB2 sing N N 400 LYS CB HB3 sing N N 401 LYS CG CD sing N N 402 LYS CG HG2 sing N N 403 LYS CG HG3 sing N N 404 LYS CD CE sing N N 405 LYS CD HD2 sing N N 406 LYS CD HD3 sing N N 407 LYS CE NZ sing N N 408 LYS CE HE2 sing N N 409 LYS CE HE3 sing N N 410 LYS NZ HZ1 sing N N 411 LYS NZ HZ2 sing N N 412 LYS NZ HZ3 sing N N 413 LYS OXT HXT sing N N 414 MET N CA sing N N 415 MET N H sing N N 416 MET N H2 sing N N 417 MET CA C sing N N 418 MET CA CB sing N N 419 MET CA HA sing N N 420 MET C O doub N N 421 MET C OXT sing N N 422 MET CB CG sing N N 423 MET CB HB2 sing N N 424 MET CB HB3 sing N N 425 MET CG SD sing N N 426 MET CG HG2 sing N N 427 MET CG HG3 sing N N 428 MET SD CE sing N N 429 MET CE HE1 sing N N 430 MET CE HE2 sing N N 431 MET CE HE3 sing N N 432 MET OXT HXT sing N N 433 PHE N CA sing N N 434 PHE N H sing N N 435 PHE N H2 sing N N 436 PHE CA C sing N N 437 PHE CA CB sing N N 438 PHE CA HA sing N N 439 PHE C O doub N N 440 PHE C OXT sing N N 441 PHE CB CG sing N N 442 PHE CB HB2 sing N N 443 PHE CB HB3 sing N N 444 PHE CG CD1 doub Y N 445 PHE CG CD2 sing Y N 446 PHE CD1 CE1 sing Y N 447 PHE CD1 HD1 sing N N 448 PHE CD2 CE2 doub Y N 449 PHE CD2 HD2 sing N N 450 PHE CE1 CZ doub Y N 451 PHE CE1 HE1 sing N N 452 PHE CE2 CZ sing Y N 453 PHE CE2 HE2 sing N N 454 PHE CZ HZ sing N N 455 PHE OXT HXT sing N N 456 PRO N CA sing N N 457 PRO N CD sing N N 458 PRO N H sing N N 459 PRO CA C sing N N 460 PRO CA CB sing N N 461 PRO CA HA sing N N 462 PRO C O doub N N 463 PRO C OXT sing N N 464 PRO CB CG sing N N 465 PRO CB HB2 sing N N 466 PRO CB HB3 sing N N 467 PRO CG CD sing N N 468 PRO CG HG2 sing N N 469 PRO CG HG3 sing N N 470 PRO CD HD2 sing N N 471 PRO CD HD3 sing N N 472 PRO OXT HXT sing N N 473 SER N CA sing N N 474 SER N H sing N N 475 SER N H2 sing N N 476 SER CA C sing N N 477 SER CA CB sing N N 478 SER CA HA sing N N 479 SER C O doub N N 480 SER C OXT sing N N 481 SER CB OG sing N N 482 SER CB HB2 sing N N 483 SER CB HB3 sing N N 484 SER OG HG sing N N 485 SER OXT HXT sing N N 486 SO4 S O1 doub N N 487 SO4 S O2 doub N N 488 SO4 S O3 sing N N 489 SO4 S O4 sing N N 490 THR N CA sing N N 491 THR N H sing N N 492 THR N H2 sing N N 493 THR CA C sing N N 494 THR CA CB sing N N 495 THR CA HA sing N N 496 THR C O doub N N 497 THR C OXT sing N N 498 THR CB OG1 sing N N 499 THR CB CG2 sing N N 500 THR CB HB sing N N 501 THR OG1 HG1 sing N N 502 THR CG2 HG21 sing N N 503 THR CG2 HG22 sing N N 504 THR CG2 HG23 sing N N 505 THR OXT HXT sing N N 506 TRP N CA sing N N 507 TRP N H sing N N 508 TRP N H2 sing N N 509 TRP CA C sing N N 510 TRP CA CB sing N N 511 TRP CA HA sing N N 512 TRP C O doub N N 513 TRP C OXT sing N N 514 TRP CB CG sing N N 515 TRP CB HB2 sing N N 516 TRP CB HB3 sing N N 517 TRP CG CD1 doub Y N 518 TRP CG CD2 sing Y N 519 TRP CD1 NE1 sing Y N 520 TRP CD1 HD1 sing N N 521 TRP CD2 CE2 doub Y N 522 TRP CD2 CE3 sing Y N 523 TRP NE1 CE2 sing Y N 524 TRP NE1 HE1 sing N N 525 TRP CE2 CZ2 sing Y N 526 TRP CE3 CZ3 doub Y N 527 TRP CE3 HE3 sing N N 528 TRP CZ2 CH2 doub Y N 529 TRP CZ2 HZ2 sing N N 530 TRP CZ3 CH2 sing Y N 531 TRP CZ3 HZ3 sing N N 532 TRP CH2 HH2 sing N N 533 TRP OXT HXT sing N N 534 TYR N CA sing N N 535 TYR N H sing N N 536 TYR N H2 sing N N 537 TYR CA C sing N N 538 TYR CA CB sing N N 539 TYR CA HA sing N N 540 TYR C O doub N N 541 TYR C OXT sing N N 542 TYR CB CG sing N N 543 TYR CB HB2 sing N N 544 TYR CB HB3 sing N N 545 TYR CG CD1 doub Y N 546 TYR CG CD2 sing Y N 547 TYR CD1 CE1 sing Y N 548 TYR CD1 HD1 sing N N 549 TYR CD2 CE2 doub Y N 550 TYR CD2 HD2 sing N N 551 TYR CE1 CZ doub Y N 552 TYR CE1 HE1 sing N N 553 TYR CE2 CZ sing Y N 554 TYR CE2 HE2 sing N N 555 TYR CZ OH sing N N 556 TYR OH HH sing N N 557 TYR OXT HXT sing N N 558 VAL N CA sing N N 559 VAL N H sing N N 560 VAL N H2 sing N N 561 VAL CA C sing N N 562 VAL CA CB sing N N 563 VAL CA HA sing N N 564 VAL C O doub N N 565 VAL C OXT sing N N 566 VAL CB CG1 sing N N 567 VAL CB CG2 sing N N 568 VAL CB HB sing N N 569 VAL CG1 HG11 sing N N 570 VAL CG1 HG12 sing N N 571 VAL CG1 HG13 sing N N 572 VAL CG2 HG21 sing N N 573 VAL CG2 HG22 sing N N 574 VAL CG2 HG23 sing N N 575 VAL OXT HXT sing N N 576 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1NK8 'double helix' 1NK8 'b-form double helix' 1NK8 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 15 1_555 -0.704 0.021 0.290 -12.262 -3.468 4.154 1 B_DG19:DC14_C B 19 ? C 14 ? 19 1 1 A DC 2 1_555 B DG 14 1_555 0.359 0.038 -0.063 -4.048 1.735 0.508 2 B_DC20:DG13_C B 20 ? C 13 ? 19 1 1 A DG 3 1_555 B DC 13 1_555 -0.381 0.119 -0.147 -3.722 -8.575 4.143 3 B_DG21:DC12_C B 21 ? C 12 ? 19 1 1 A DA 4 1_555 B DT 12 1_555 -0.137 0.087 0.004 -5.553 -13.385 1.649 4 B_DA22:DT11_C B 22 ? C 11 ? 20 1 1 A DT 5 1_555 B DA 11 1_555 -0.072 0.110 -0.015 -4.359 -8.364 -0.600 5 B_DT23:DA10_C B 23 ? C 10 ? 20 1 1 A DC 6 1_555 B DG 10 1_555 0.268 -0.033 -0.231 -0.971 -8.574 -0.024 6 B_DC24:DG9_C B 24 ? C 9 ? 19 1 1 A DA 7 1_555 B DT 9 1_555 0.130 -0.016 0.040 -10.435 -7.657 3.749 7 B_DA25:DT8_C B 25 ? C 8 ? 20 1 1 A DG 8 1_555 B DC 8 1_555 -0.001 -0.041 -0.104 -3.360 -2.189 -0.888 8 B_DG26:DC7_C B 26 ? C 7 ? 19 1 1 A DC 9 1_555 B DG 7 1_555 0.235 -0.074 0.199 -11.022 -8.581 1.353 9 B_DC27:DG6_C B 27 ? C 6 ? 19 1 1 A DG 10 1_555 B DT 6 1_555 -2.435 -0.568 0.070 19.533 0.710 -1.756 10 B_DG28:DT5_C B 28 ? C 5 ? 28 ? 1 A DC 11 1_555 B DG 5 1_555 0.207 -0.119 0.030 24.113 -13.992 -1.603 11 B_DC29:DG4_C B 29 ? C 4 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 15 1_555 A DC 2 1_555 B DG 14 1_555 0.218 -0.175 3.101 2.982 4.649 36.338 -0.879 0.040 3.063 7.402 -4.748 36.741 1 BB_DG19DC20:DG13DC14_CC B 19 ? C 14 ? B 20 ? C 13 ? 1 A DC 2 1_555 B DG 14 1_555 A DG 3 1_555 B DC 13 1_555 -0.105 0.697 3.254 -0.030 6.727 32.540 0.074 0.178 3.328 11.847 0.053 33.209 2 BB_DC20DG21:DC12DG13_CC B 20 ? C 13 ? B 21 ? C 12 ? 1 A DG 3 1_555 B DC 13 1_555 A DA 4 1_555 B DT 12 1_555 -0.536 -0.192 3.313 -3.338 3.485 37.260 -0.761 0.390 3.316 5.427 5.198 37.560 3 BB_DG21DA22:DT11DC12_CC B 21 ? C 12 ? B 22 ? C 11 ? 1 A DA 4 1_555 B DT 12 1_555 A DT 5 1_555 B DA 11 1_555 -0.083 -0.691 3.224 0.256 2.106 30.411 -1.725 0.208 3.169 4.008 -0.487 30.483 4 BB_DA22DT23:DA10DT11_CC B 22 ? C 11 ? B 23 ? C 10 ? 1 A DT 5 1_555 B DA 11 1_555 A DC 6 1_555 B DG 10 1_555 0.754 -0.053 3.164 3.952 7.203 36.690 -1.002 -0.667 3.159 11.270 -6.183 37.568 5 BB_DT23DC24:DG9DA10_CC B 23 ? C 10 ? B 24 ? C 9 ? 1 A DC 6 1_555 B DG 10 1_555 A DA 7 1_555 B DT 9 1_555 0.619 -0.324 3.529 0.481 8.149 31.054 -2.152 -1.028 3.347 14.900 -0.880 32.083 6 BB_DC24DA25:DT8DG9_CC B 24 ? C 9 ? B 25 ? C 8 ? 1 A DA 7 1_555 B DT 9 1_555 A DG 8 1_555 B DC 8 1_555 0.057 -0.153 3.363 2.001 12.266 28.117 -2.755 0.295 3.031 23.829 -3.888 30.690 7 BB_DA25DG26:DC7DT8_CC B 25 ? C 8 ? B 26 ? C 7 ? 1 A DG 8 1_555 B DC 8 1_555 A DC 9 1_555 B DG 7 1_555 -0.630 -0.234 3.428 -4.345 5.637 36.548 -1.157 0.378 3.406 8.884 6.848 37.211 8 BB_DG26DC27:DG6DC7_CC B 26 ? C 7 ? B 27 ? C 6 ? 1 A DC 9 1_555 B DG 7 1_555 A DG 10 1_555 B DT 6 1_555 0.122 -0.307 2.640 -2.947 13.519 18.780 -4.371 -1.088 1.942 35.798 7.804 23.290 9 BB_DC27DG28:DT5DG6_CC B 27 ? C 6 ? B 28 ? C 5 ? 1 A DG 10 1_555 B DT 6 1_555 A DC 11 1_555 B DG 5 1_555 -0.099 -0.626 3.393 -3.117 -0.947 43.865 -0.742 -0.174 3.404 -1.266 4.166 43.979 10 BB_DG28DC29:DG4DT5_CC B 28 ? C 5 ? B 29 ? C 4 ? # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero D 4 GLC 1 D GLC 1 D SUC 901 n D 4 FRU 2 D FRU 2 D SUC 901 n E 4 GLC 1 E GLC 1 D SUC 902 n E 4 FRU 2 E FRU 2 D SUC 902 n F 4 GLC 1 F GLC 1 D SUC 903 n F 4 FRU 2 F FRU 2 D SUC 903 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FRU 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DFrufb FRU 'COMMON NAME' GMML 1.0 b-D-fructofuranose FRU 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Fruf FRU 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fru GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # _pdbx_entity_branch.entity_id 4 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 4 DFrufb2-1DGlcpa 'Glycam Condensed Sequence' GMML 1.0 2 4 'WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0 3 4 '[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 4 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 4 GLC 1 n 4 FRU 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'SULFATE ION' SO4 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2BDP _pdbx_initial_refinement_model.details 'PDB ENTRY 2BDP' #