HEADER ISOMERASE 12-JAN-03 1NMW TITLE SOLUTION STRUCTURE OF THE PPIASE DOMAIN OF HUMAN PIN1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PPIASE DOMAIN (RESIDUES 50-163); COMPND 5 SYNONYM: ROTAMASE PIN1, PPIASE PIN1; COMPND 6 EC: 5.2.1.8; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PIN1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PPIASE DOMAIN, BETA-ALPHA, A1/B1 LOOP, SULPHATE, ISOMERASE EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR E.BAYER,S.GOETTSCH,J.W.MUELLER,B.GRIEWEL,E.GUIBERMAN,L.MAYR,P.BAYER REVDAT 3 09-MAR-11 1NMW 1 REMARK REVDAT 2 24-FEB-09 1NMW 1 VERSN REVDAT 1 15-JUL-03 1NMW 0 JRNL AUTH E.BAYER,S.GOETTSCH,J.W.MUELLER,B.GRIEWEL,E.GUIBERMAN, JRNL AUTH 2 L.M.MAYR,P.BAYER JRNL TITL STRUCTURAL ANALYSIS OF THE MITOTIC REGULATOR HPIN1 IN JRNL TITL 2 SOLUTION: INSIGHTS INTO DOMAIN ARCHITECTURE AND SUBSTRATE JRNL TITL 3 BINDING. JRNL REF J.BIOL.CHEM. V. 278 26183 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12721297 JRNL DOI 10.1074/JBC.M300721200 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.P.LU,S.D.HANNES,T.HUNTER REMARK 1 TITL A HUMAN PEPTIDYL-PROLYL ISOMERASE ESSENTIAL FOR REGULATION REMARK 1 TITL 2 OF MITOSIS REMARK 1 REF NATURE V. 380 544 1996 REMARK 1 REFN ISSN 0028-0836 REMARK 1 DOI 10.1038/380544A0 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.RANGANATHAN,K.P.LU,T.HUNTER,J.P.NOEL REMARK 1 TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF THE MITOTIC ROTAMASE REMARK 1 TITL 2 PIN1 SUGGESTS SUBSTRATE RECOGNITION IS PHOSPHORYLATION REMARK 1 TITL 3 DEPENDENT REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 89 875 1997 REMARK 1 REFN ISSN 0092-8674 REMARK 1 DOI 10.1016/S0092-8674(00)80273-1 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.A.VERDECIA,M.E.BOWMAN,K.P.LU,T.HUNTER,J.P.NOEL REMARK 1 TITL STRUCTURAL BASIS FOR PHOSPHOSERINE-PROLINE RECOGNITION BY REMARK 1 TITL 2 GROUP IV WW DOMAINS REMARK 1 REF NAT.STRUCT.BIOL. V. 7 639 2000 REMARK 1 REFN ISSN 1072-8368 REMARK 1 DOI 10.1038/77929 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUENGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1NMW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JAN-03. REMARK 100 THE RCSB ID CODE IS RCSB018017. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300; 300; 300; 300 REMARK 210 PH : 6.6; 6.6; 6.6; 6.6 REMARK 210 IONIC STRENGTH : N.C.; N.C.; N.C.; N.C. REMARK 210 PRESSURE : AMBIENT; AMBIENT; AMBIENT; REMARK 210 AMBIENT REMARK 210 SAMPLE CONTENTS : 0.6-0.8MM PIN1(PPIASE) U-15N, REMARK 210 13C; 50MM PHOSPHATE BUFFER, 1MM REMARK 210 DTT, 5MM EDTA, 50-100MM NA REMARK 210 SULPHATE; ~0.1-0.2MM PIN1(PPIAS) REMARK 210 U-15N,13C; 50MM PHOSPHATE BUFFER, REMARK 210 1MM DTT, 5MM EDTA, 50-100MM NA REMARK 210 SULPHATE; 0.6-0.8MM PIN1(PPIASE) REMARK 210 U-15N,13C;50MM TRIS/HCL BUFFER, REMARK 210 1MM DTT, 5MM EDTA; 0.8MM REMARK 210 PIN1(PPIASE); 50MM PHOSPHATE REMARK 210 BUFFER, 1MM DTT, 5MM EDTA, 50- REMARK 210 100MM NA SULPHATE REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C- REMARK 210 SEPARATED_NOESY; HNHA; 2D NOESY; REMARK 210 2D TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.2, AURELIA 2.8.11, REMARK 210 VNMR 6.18, NDEE 1.2 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS,STRUCTURES REMARK 210 WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 7 REMARK 210 REMARK 210 REMARK: HYDROGEN BONDS WERE EXTRACTED FROM HSQC SPECTRA IN D2O REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H THR A 152 O GLY A 155 1.59 REMARK 500 O GLU A 135 H PHE A 139 1.61 REMARK 500 H SER A 147 O ILE A 159 1.63 REMARK 500 H SER A 72 O GLN A 75 1.66 REMARK 500 O ASP A 102 H LEU A 106 1.67 REMARK 500 O LEU A 86 H ASN A 90 1.67 REMARK 500 O VAL A 150 H HIS A 157 1.68 REMARK 500 O THR A 81 H ALA A 85 1.69 REMARK 500 O ALA A 107 H SER A 111 1.69 REMARK 500 H SER A 65 O ARG A 80 1.70 REMARK 500 O PHE A 134 H SER A 138 1.73 REMARK 500 O ARG A 69 H SER A 71 1.74 REMARK 500 O SER A 58 H LEU A 160 1.76 REMARK 500 O ARG A 56 H THR A 162 1.77 REMARK 500 O PHE A 103 H ALA A 107 1.81 REMARK 500 H SER A 58 O LEU A 160 1.88 REMARK 500 O VAL A 55 H PHE A 125 1.92 REMARK 500 H VAL A 150 O HIS A 157 1.93 REMARK 500 O PRO A 70 H ILE A 78 1.94 REMARK 500 H LEU A 60 O ILE A 158 1.94 REMARK 500 HE1 TRP A 73 O CYS A 113 1.94 REMARK 500 O SER A 115 H GLY A 120 1.95 REMARK 500 O LYS A 82 H LEU A 86 1.95 REMARK 500 O SER A 115 H ALA A 118 1.96 REMARK 500 HA HIS A 59 O ILE A 158 1.97 REMARK 500 O ALA A 116 H ARG A 119 1.97 REMARK 500 O ILE A 89 H ILE A 93 1.99 REMARK 500 O ASN A 90 H GLN A 94 1.99 REMARK 500 O ILE A 93 H LYS A 97 2.00 REMARK 500 O GLN A 94 H SER A 98 2.01 REMARK 500 OG SER A 154 HE2 HIS A 157 2.04 REMARK 500 O LYS A 132 H ASP A 136 2.05 REMARK 500 OD2 ASP A 102 H SER A 105 2.05 REMARK 500 O ALA A 107 H PHE A 110 2.05 REMARK 500 O GLU A 104 HB3 ARG A 119 2.06 REMARK 500 O GLU A 83 H GLU A 87 2.06 REMARK 500 O ASP A 136 H ALA A 140 2.08 REMARK 500 O LEU A 88 H TYR A 92 2.08 REMARK 500 H VAL A 55 O PHE A 125 2.09 REMARK 500 H GLY A 144 O ARG A 161 2.09 REMARK 500 O PHE A 134 HB2 SER A 138 2.11 REMARK 500 O PRO A 133 H ALA A 137 2.11 REMARK 500 H VAL A 62 O ILE A 156 2.12 REMARK 500 O GLU A 135 HB2 PHE A 139 2.12 REMARK 500 O ILE A 96 H GLY A 99 2.12 REMARK 500 O HIS A 64 H SER A 67 2.13 REMARK 500 O GLU A 145 HA LEU A 160 2.13 REMARK 500 O SER A 58 HA ILE A 159 2.14 REMARK 500 O SER A 114 H LYS A 117 2.16 REMARK 500 HG3 ARG A 54 O PHE A 125 2.17 REMARK 500 REMARK 500 THIS ENTRY HAS 571 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 52 -174.47 -67.77 REMARK 500 1 ARG A 69 88.63 -152.56 REMARK 500 1 PRO A 70 63.49 -68.84 REMARK 500 1 GLN A 131 151.02 -47.99 REMARK 500 2 ARG A 69 84.02 -156.75 REMARK 500 2 GLU A 76 -45.63 -133.77 REMARK 500 2 SER A 114 1.68 -61.84 REMARK 500 2 ASP A 153 -52.38 -24.12 REMARK 500 2 THR A 162 -67.63 -99.48 REMARK 500 3 ARG A 69 83.44 -153.03 REMARK 500 3 ARG A 80 95.30 -56.52 REMARK 500 3 ASP A 112 44.02 -90.74 REMARK 500 3 SER A 114 1.22 -61.69 REMARK 500 4 GLU A 51 50.90 -156.54 REMARK 500 4 ARG A 69 85.77 -154.58 REMARK 500 4 PRO A 70 89.78 -68.97 REMARK 500 4 SER A 71 -161.10 -178.97 REMARK 500 4 ARG A 74 31.40 -99.56 REMARK 500 4 GLN A 75 -142.27 75.43 REMARK 500 4 GLU A 76 126.77 61.50 REMARK 500 4 THR A 79 50.43 -159.97 REMARK 500 4 ASP A 102 151.93 -44.30 REMARK 500 4 ASP A 112 35.38 -91.48 REMARK 500 4 ALA A 116 -32.95 -37.61 REMARK 500 4 ASP A 121 99.98 -59.42 REMARK 500 5 GLU A 51 88.51 64.05 REMARK 500 5 ARG A 69 87.87 -151.40 REMARK 500 5 PRO A 70 68.20 -67.00 REMARK 500 5 SER A 114 0.27 -64.06 REMARK 500 5 ARG A 119 31.37 75.99 REMARK 500 5 ASP A 121 104.49 -56.91 REMARK 500 5 ARG A 127 104.59 -50.35 REMARK 500 5 THR A 162 -61.78 -99.46 REMARK 500 6 ARG A 69 84.32 -153.67 REMARK 500 6 SER A 71 145.37 -172.97 REMARK 500 6 ASP A 102 157.13 -48.19 REMARK 500 6 SER A 114 0.38 -63.43 REMARK 500 6 ASP A 121 99.98 -56.01 REMARK 500 7 ARG A 69 81.31 -151.05 REMARK 500 7 ASP A 112 33.93 -91.31 REMARK 500 8 SER A 114 0.26 -63.08 REMARK 500 8 ASP A 121 105.38 -52.76 REMARK 500 8 GLN A 131 159.22 -45.99 REMARK 500 8 ASP A 153 -39.91 -38.74 REMARK 500 9 THR A 79 50.75 -150.24 REMARK 500 9 THR A 81 174.71 -56.55 REMARK 500 9 ASP A 102 159.56 -45.69 REMARK 500 9 ALA A 116 -33.26 -39.62 REMARK 500 9 THR A 162 -60.48 -99.43 REMARK 500 10 GLU A 51 167.73 60.94 REMARK 500 REMARK 500 THIS ENTRY HAS 59 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NMV RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF HUMAN PIN1 REMARK 900 RELATED ID: 1PIN RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF HPIN1 WITH ALA-PRO PEPTIDE COMPLEXED TO REMARK 900 PPIASE DOMAIN REMARK 900 RELATED ID: 1F8A RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF HPIN1 WITH CTD PEPTIDE COMPLEXED TO WW REMARK 900 DOMAIN REMARK 900 RELATED ID: 1EQ3 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF HUMAN PARVULIN14 REMARK 900 RELATED ID: 5305 RELATED DB: BMRB REMARK 900 ASSIGNMENTS OF HPIN1 DBREF 1NMW A 50 163 UNP Q13526 PIN1_HUMAN 50 163 SEQRES 1 A 114 GLY GLU PRO ALA ARG VAL ARG CYS SER HIS LEU LEU VAL SEQRES 2 A 114 LYS HIS SER GLN SER ARG ARG PRO SER SER TRP ARG GLN SEQRES 3 A 114 GLU LYS ILE THR ARG THR LYS GLU GLU ALA LEU GLU LEU SEQRES 4 A 114 ILE ASN GLY TYR ILE GLN LYS ILE LYS SER GLY GLU GLU SEQRES 5 A 114 ASP PHE GLU SER LEU ALA SER GLN PHE SER ASP CYS SER SEQRES 6 A 114 SER ALA LYS ALA ARG GLY ASP LEU GLY ALA PHE SER ARG SEQRES 7 A 114 GLY GLN MET GLN LYS PRO PHE GLU ASP ALA SER PHE ALA SEQRES 8 A 114 LEU ARG THR GLY GLU MET SER GLY PRO VAL PHE THR ASP SEQRES 9 A 114 SER GLY ILE HIS ILE ILE LEU ARG THR GLU HET SO4 A 200 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 O4 S 2- HELIX 1 1 THR A 81 SER A 98 1 18 HELIX 2 2 ASP A 102 SER A 111 1 10 HELIX 3 3 CYS A 113 ARG A 119 5 7 HELIX 4 4 GLN A 131 LEU A 141 1 11 SHEET 1 A 4 ASP A 121 SER A 126 0 SHEET 2 A 4 ARG A 54 VAL A 62 -1 N VAL A 55 O PHE A 125 SHEET 3 A 4 ILE A 156 ARG A 161 -1 O LEU A 160 N SER A 58 SHEET 4 A 4 VAL A 150 PHE A 151 -1 N VAL A 150 O HIS A 157 SITE 1 AC1 4 LYS A 63 ARG A 68 ARG A 69 SER A 154 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1