data_1NQ1 # _entry.id 1NQ1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1NQ1 pdb_00001nq1 10.2210/pdb1nq1/pdb RCSB RCSB018096 ? ? WWPDB D_1000018096 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-04-15 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 5 'Structure model' 1 4 2024-02-14 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 4 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 5 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 6 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 7 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 8 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 9 4 'Structure model' '_struct_conn.ptnr1_symmetry' 10 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 13 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_symmetry' 17 4 'Structure model' '_struct_ref_seq_dif.details' 18 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NQ1 _pdbx_database_status.recvd_initial_deposition_date 2003-01-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Huber, B.R.' 1 'Desclozeaux, M.' 2 'West, B.L.' 3 'Cunha-Lima, S.T.' 4 'Nguyen, H.T.' 5 'Baxter, J.D.' 6 'Ingraham, H.A.' 7 'Fletterick, R.J.' 8 # _citation.id primary _citation.title ;Thyroid hormone receptor-beta mutations conferring hormone resistance and reduced corepressor release exhibit decreased stability in the N-terminal ligand-binding domain ; _citation.journal_abbrev Mol.Endocrinol. _citation.journal_volume 17 _citation.page_first 107 _citation.page_last 116 _citation.year 2003 _citation.journal_id_ASTM MOENEN _citation.country US _citation.journal_id_ISSN 0888-8809 _citation.journal_id_CSD 2068 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12511610 _citation.pdbx_database_id_DOI 10.1210/me.2002-0097 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huber, B.R.' 1 ? primary 'Desclozeaux, M.' 2 ? primary 'West, B.L.' 3 ? primary 'Cunha-Lima, S.T.' 4 ? primary 'Nguyen, H.T.' 5 ? primary 'Baxter, J.D.' 6 ? primary 'Ingraham, H.A.' 7 ? primary 'Fletterick, R.J.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Thyroid hormone receptor beta-1' 29641.256 1 ? R243Q 'LIGAND BINDING DOMAIN' ? 2 non-polymer syn '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' 621.932 1 ? ? ? ? 3 non-polymer syn ARSENIC 74.922 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AAMEELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKQKFLPDDIGQAPIVNAPEGGKVDLEAFSHFTKIITP AITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGM SLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASR FLHMKVECPTELFPPLFLEVFED ; _entity_poly.pdbx_seq_one_letter_code_can ;AAMEELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKQKFLPDDIGQAPIVNAPEGGKVDLEAFSHFTKIITP AITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGM SLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASR FLHMKVECPTELFPPLFLEVFED ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' 4HY 3 ARSENIC ARS # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 MET n 1 4 GLU n 1 5 GLU n 1 6 LEU n 1 7 GLN n 1 8 LYS n 1 9 SER n 1 10 ILE n 1 11 GLY n 1 12 HIS n 1 13 LYS n 1 14 PRO n 1 15 GLU n 1 16 PRO n 1 17 THR n 1 18 ASP n 1 19 GLU n 1 20 GLU n 1 21 TRP n 1 22 GLU n 1 23 LEU n 1 24 ILE n 1 25 LYS n 1 26 THR n 1 27 VAL n 1 28 THR n 1 29 GLU n 1 30 ALA n 1 31 HIS n 1 32 VAL n 1 33 ALA n 1 34 THR n 1 35 ASN n 1 36 ALA n 1 37 GLN n 1 38 GLY n 1 39 SER n 1 40 HIS n 1 41 TRP n 1 42 LYS n 1 43 GLN n 1 44 LYS n 1 45 GLN n 1 46 LYS n 1 47 PHE n 1 48 LEU n 1 49 PRO n 1 50 ASP n 1 51 ASP n 1 52 ILE n 1 53 GLY n 1 54 GLN n 1 55 ALA n 1 56 PRO n 1 57 ILE n 1 58 VAL n 1 59 ASN n 1 60 ALA n 1 61 PRO n 1 62 GLU n 1 63 GLY n 1 64 GLY n 1 65 LYS n 1 66 VAL n 1 67 ASP n 1 68 LEU n 1 69 GLU n 1 70 ALA n 1 71 PHE n 1 72 SER n 1 73 HIS n 1 74 PHE n 1 75 THR n 1 76 LYS n 1 77 ILE n 1 78 ILE n 1 79 THR n 1 80 PRO n 1 81 ALA n 1 82 ILE n 1 83 THR n 1 84 ARG n 1 85 VAL n 1 86 VAL n 1 87 ASP n 1 88 PHE n 1 89 ALA n 1 90 LYS n 1 91 LYS n 1 92 LEU n 1 93 PRO n 1 94 MET n 1 95 PHE n 1 96 CYS n 1 97 GLU n 1 98 LEU n 1 99 PRO n 1 100 CYS n 1 101 GLU n 1 102 ASP n 1 103 GLN n 1 104 ILE n 1 105 ILE n 1 106 LEU n 1 107 LEU n 1 108 LYS n 1 109 GLY n 1 110 CYS n 1 111 CYS n 1 112 MET n 1 113 GLU n 1 114 ILE n 1 115 MET n 1 116 SER n 1 117 LEU n 1 118 ARG n 1 119 ALA n 1 120 ALA n 1 121 VAL n 1 122 ARG n 1 123 TYR n 1 124 ASP n 1 125 PRO n 1 126 GLU n 1 127 SER n 1 128 GLU n 1 129 THR n 1 130 LEU n 1 131 THR n 1 132 LEU n 1 133 ASN n 1 134 GLY n 1 135 GLU n 1 136 MET n 1 137 ALA n 1 138 VAL n 1 139 THR n 1 140 ARG n 1 141 GLY n 1 142 GLN n 1 143 LEU n 1 144 LYS n 1 145 ASN n 1 146 GLY n 1 147 GLY n 1 148 LEU n 1 149 GLY n 1 150 VAL n 1 151 VAL n 1 152 SER n 1 153 ASP n 1 154 ALA n 1 155 ILE n 1 156 PHE n 1 157 ASP n 1 158 LEU n 1 159 GLY n 1 160 MET n 1 161 SER n 1 162 LEU n 1 163 SER n 1 164 SER n 1 165 PHE n 1 166 ASN n 1 167 LEU n 1 168 ASP n 1 169 ASP n 1 170 THR n 1 171 GLU n 1 172 VAL n 1 173 ALA n 1 174 LEU n 1 175 LEU n 1 176 GLN n 1 177 ALA n 1 178 VAL n 1 179 LEU n 1 180 LEU n 1 181 MET n 1 182 SER n 1 183 SER n 1 184 ASP n 1 185 ARG n 1 186 PRO n 1 187 GLY n 1 188 LEU n 1 189 ALA n 1 190 CYS n 1 191 VAL n 1 192 GLU n 1 193 ARG n 1 194 ILE n 1 195 GLU n 1 196 LYS n 1 197 TYR n 1 198 GLN n 1 199 ASP n 1 200 SER n 1 201 PHE n 1 202 LEU n 1 203 LEU n 1 204 ALA n 1 205 PHE n 1 206 GLU n 1 207 HIS n 1 208 TYR n 1 209 ILE n 1 210 ASN n 1 211 TYR n 1 212 ARG n 1 213 LYS n 1 214 HIS n 1 215 HIS n 1 216 VAL n 1 217 THR n 1 218 HIS n 1 219 PHE n 1 220 TRP n 1 221 PRO n 1 222 LYS n 1 223 LEU n 1 224 LEU n 1 225 MET n 1 226 LYS n 1 227 VAL n 1 228 THR n 1 229 ASP n 1 230 LEU n 1 231 ARG n 1 232 MET n 1 233 ILE n 1 234 GLY n 1 235 ALA n 1 236 CYS n 1 237 HIS n 1 238 ALA n 1 239 SER n 1 240 ARG n 1 241 PHE n 1 242 LEU n 1 243 HIS n 1 244 MET n 1 245 LYS n 1 246 VAL n 1 247 GLU n 1 248 CYS n 1 249 PRO n 1 250 THR n 1 251 GLU n 1 252 LEU n 1 253 PHE n 1 254 PRO n 1 255 PRO n 1 256 LEU n 1 257 PHE n 1 258 LEU n 1 259 GLU n 1 260 VAL n 1 261 PHE n 1 262 GLU n 1 263 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'THRB OR NR1A2 OR ERBA2 OR THR1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 DE3 PLYSS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4HY non-polymer . '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' ? 'C14 H9 I3 O4' 621.932 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ARS non-polymer . ARSENIC ? As 74.922 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 199 199 ALA ALA A . n A 1 2 ALA 2 200 200 ALA ALA A . n A 1 3 MET 3 201 201 MET MET A . n A 1 4 GLU 4 202 202 GLU GLU A . n A 1 5 GLU 5 203 203 GLU ALA A . n A 1 6 LEU 6 204 204 LEU LEU A . n A 1 7 GLN 7 205 205 GLN GLN A . n A 1 8 LYS 8 206 206 LYS LYS A . n A 1 9 SER 9 207 207 SER SER A . n A 1 10 ILE 10 208 208 ILE ILE A . n A 1 11 GLY 11 209 209 GLY GLY A . n A 1 12 HIS 12 210 210 HIS ALA A . n A 1 13 LYS 13 211 211 LYS LYS A . n A 1 14 PRO 14 212 212 PRO PRO A . n A 1 15 GLU 15 213 213 GLU GLU A . n A 1 16 PRO 16 214 214 PRO PRO A . n A 1 17 THR 17 215 215 THR THR A . n A 1 18 ASP 18 216 216 ASP ASP A . n A 1 19 GLU 19 217 217 GLU ALA A . n A 1 20 GLU 20 218 218 GLU GLU A . n A 1 21 TRP 21 219 219 TRP TRP A . n A 1 22 GLU 22 220 220 GLU GLU A . n A 1 23 LEU 23 221 221 LEU LEU A . n A 1 24 ILE 24 222 222 ILE ILE A . n A 1 25 LYS 25 223 223 LYS LYS A . n A 1 26 THR 26 224 224 THR THR A . n A 1 27 VAL 27 225 225 VAL VAL A . n A 1 28 THR 28 226 226 THR THR A . n A 1 29 GLU 29 227 227 GLU ALA A . n A 1 30 ALA 30 228 228 ALA ALA A . n A 1 31 HIS 31 229 229 HIS HIS A . n A 1 32 VAL 32 230 230 VAL VAL A . n A 1 33 ALA 33 231 231 ALA ALA A . n A 1 34 THR 34 232 232 THR THR A . n A 1 35 ASN 35 233 233 ASN ASN A . n A 1 36 ALA 36 234 234 ALA ALA A . n A 1 37 GLN 37 235 235 GLN ALA A . n A 1 38 GLY 38 236 236 GLY GLY A . n A 1 39 SER 39 237 237 SER ALA A . n A 1 40 HIS 40 238 238 HIS HIS A . n A 1 41 TRP 41 239 239 TRP TRP A . n A 1 42 LYS 42 240 240 LYS LYS A . n A 1 43 GLN 43 241 241 GLN ALA A . n A 1 44 LYS 44 242 242 LYS LYS A . n A 1 45 GLN 45 243 243 GLN GLN A . n A 1 46 LYS 46 244 244 LYS LYS A . n A 1 47 PHE 47 245 245 PHE PHE A . n A 1 48 LEU 48 246 246 LEU LEU A . n A 1 49 PRO 49 247 247 PRO PRO A . n A 1 50 ASP 50 248 248 ASP ASP A . n A 1 51 ASP 51 249 249 ASP ASP A . n A 1 52 ILE 52 250 250 ILE ILE A . n A 1 53 GLY 53 251 251 GLY GLY A . n A 1 54 GLN 54 252 252 GLN GLN A . n A 1 55 ALA 55 253 ? ? ? A . n A 1 56 PRO 56 254 ? ? ? A . n A 1 57 ILE 57 255 ? ? ? A . n A 1 58 VAL 58 256 ? ? ? A . n A 1 59 ASN 59 257 ? ? ? A . n A 1 60 ALA 60 258 ? ? ? A . n A 1 61 PRO 61 259 ? ? ? A . n A 1 62 GLU 62 260 ? ? ? A . n A 1 63 GLY 63 261 ? ? ? A . n A 1 64 GLY 64 262 ? ? ? A . n A 1 65 LYS 65 263 263 LYS ALA A . n A 1 66 VAL 66 264 264 VAL VAL A . n A 1 67 ASP 67 265 265 ASP ASP A . n A 1 68 LEU 68 266 266 LEU LEU A . n A 1 69 GLU 69 267 267 GLU GLU A . n A 1 70 ALA 70 268 268 ALA ALA A . n A 1 71 PHE 71 269 269 PHE PHE A . n A 1 72 SER 72 270 270 SER SER A . n A 1 73 HIS 73 271 271 HIS HIS A . n A 1 74 PHE 74 272 272 PHE PHE A . n A 1 75 THR 75 273 273 THR THR A . n A 1 76 LYS 76 274 274 LYS ALA A . n A 1 77 ILE 77 275 275 ILE ILE A . n A 1 78 ILE 78 276 276 ILE ILE A . n A 1 79 THR 79 277 277 THR THR A . n A 1 80 PRO 80 278 278 PRO PRO A . n A 1 81 ALA 81 279 279 ALA ALA A . n A 1 82 ILE 82 280 280 ILE ILE A . n A 1 83 THR 83 281 281 THR THR A . n A 1 84 ARG 84 282 282 ARG ARG A . n A 1 85 VAL 85 283 283 VAL VAL A . n A 1 86 VAL 86 284 284 VAL VAL A . n A 1 87 ASP 87 285 285 ASP ASP A . n A 1 88 PHE 88 286 286 PHE PHE A . n A 1 89 ALA 89 287 287 ALA ALA A . n A 1 90 LYS 90 288 288 LYS LYS A . n A 1 91 LYS 91 289 289 LYS LYS A . n A 1 92 LEU 92 290 290 LEU LEU A . n A 1 93 PRO 93 291 291 PRO PRO A . n A 1 94 MET 94 292 292 MET MET A . n A 1 95 PHE 95 293 293 PHE PHE A . n A 1 96 CYS 96 294 294 CYS CYS A . n A 1 97 GLU 97 295 295 GLU GLU A . n A 1 98 LEU 98 296 296 LEU LEU A . n A 1 99 PRO 99 297 297 PRO PRO A . n A 1 100 CYS 100 298 298 CYS CYS A . n A 1 101 GLU 101 299 299 GLU GLU A . n A 1 102 ASP 102 300 300 ASP ASP A . n A 1 103 GLN 103 301 301 GLN GLN A . n A 1 104 ILE 104 302 302 ILE ILE A . n A 1 105 ILE 105 303 303 ILE ILE A . n A 1 106 LEU 106 304 304 LEU LEU A . n A 1 107 LEU 107 305 305 LEU LEU A . n A 1 108 LYS 108 306 306 LYS LYS A . n A 1 109 GLY 109 307 307 GLY GLY A . n A 1 110 CYS 110 308 308 CYS CYS A . n A 1 111 CYS 111 309 309 CYS CYS A . n A 1 112 MET 112 310 310 MET MET A . n A 1 113 GLU 113 311 311 GLU GLU A . n A 1 114 ILE 114 312 312 ILE ILE A . n A 1 115 MET 115 313 313 MET MET A . n A 1 116 SER 116 314 314 SER SER A . n A 1 117 LEU 117 315 315 LEU LEU A . n A 1 118 ARG 118 316 316 ARG ARG A . n A 1 119 ALA 119 317 317 ALA ALA A . n A 1 120 ALA 120 318 318 ALA ALA A . n A 1 121 VAL 121 319 319 VAL VAL A . n A 1 122 ARG 122 320 320 ARG ARG A . n A 1 123 TYR 123 321 321 TYR TYR A . n A 1 124 ASP 124 322 322 ASP ASP A . n A 1 125 PRO 125 323 323 PRO PRO A . n A 1 126 GLU 126 324 324 GLU ALA A . n A 1 127 SER 127 325 325 SER SER A . n A 1 128 GLU 128 326 326 GLU GLU A . n A 1 129 THR 129 327 327 THR THR A . n A 1 130 LEU 130 328 328 LEU LEU A . n A 1 131 THR 131 329 329 THR THR A . n A 1 132 LEU 132 330 330 LEU LEU A . n A 1 133 ASN 133 331 331 ASN ASN A . n A 1 134 GLY 134 332 332 GLY GLY A . n A 1 135 GLU 135 333 333 GLU GLU A . n A 1 136 MET 136 334 334 MET MET A . n A 1 137 ALA 137 335 335 ALA ALA A . n A 1 138 VAL 138 336 336 VAL VAL A . n A 1 139 THR 139 337 337 THR THR A . n A 1 140 ARG 140 338 338 ARG ARG A . n A 1 141 GLY 141 339 339 GLY GLY A . n A 1 142 GLN 142 340 340 GLN GLN A . n A 1 143 LEU 143 341 341 LEU LEU A . n A 1 144 LYS 144 342 342 LYS LYS A . n A 1 145 ASN 145 343 343 ASN ASN A . n A 1 146 GLY 146 344 344 GLY GLY A . n A 1 147 GLY 147 345 345 GLY GLY A . n A 1 148 LEU 148 346 346 LEU LEU A . n A 1 149 GLY 149 347 347 GLY GLY A . n A 1 150 VAL 150 348 348 VAL VAL A . n A 1 151 VAL 151 349 349 VAL VAL A . n A 1 152 SER 152 350 350 SER SER A . n A 1 153 ASP 153 351 351 ASP ASP A . n A 1 154 ALA 154 352 352 ALA ALA A . n A 1 155 ILE 155 353 353 ILE ILE A . n A 1 156 PHE 156 354 354 PHE PHE A . n A 1 157 ASP 157 355 355 ASP ASP A . n A 1 158 LEU 158 356 356 LEU LEU A . n A 1 159 GLY 159 357 357 GLY GLY A . n A 1 160 MET 160 358 358 MET MET A . n A 1 161 SER 161 359 359 SER SER A . n A 1 162 LEU 162 360 360 LEU LEU A . n A 1 163 SER 163 361 361 SER SER A . n A 1 164 SER 164 362 362 SER SER A . n A 1 165 PHE 165 363 363 PHE PHE A . n A 1 166 ASN 166 364 364 ASN ASN A . n A 1 167 LEU 167 365 365 LEU LEU A . n A 1 168 ASP 168 366 366 ASP ASP A . n A 1 169 ASP 169 367 367 ASP ASP A . n A 1 170 THR 170 368 368 THR THR A . n A 1 171 GLU 171 369 369 GLU GLU A . n A 1 172 VAL 172 370 370 VAL VAL A . n A 1 173 ALA 173 371 371 ALA ALA A . n A 1 174 LEU 174 372 372 LEU LEU A . n A 1 175 LEU 175 373 373 LEU LEU A . n A 1 176 GLN 176 374 374 GLN GLN A . n A 1 177 ALA 177 375 375 ALA ALA A . n A 1 178 VAL 178 376 376 VAL VAL A . n A 1 179 LEU 179 377 377 LEU LEU A . n A 1 180 LEU 180 378 378 LEU LEU A . n A 1 181 MET 181 379 379 MET MET A . n A 1 182 SER 182 380 380 SER SER A . n A 1 183 SER 183 381 381 SER SER A . n A 1 184 ASP 184 382 382 ASP ASP A . n A 1 185 ARG 185 383 383 ARG ARG A . n A 1 186 PRO 186 384 384 PRO PRO A . n A 1 187 GLY 187 385 385 GLY GLY A . n A 1 188 LEU 188 386 386 LEU LEU A . n A 1 189 ALA 189 387 387 ALA ALA A . n A 1 190 CYS 190 388 388 CYS CYS A . n A 1 191 VAL 191 389 389 VAL VAL A . n A 1 192 GLU 192 390 390 GLU ALA A . n A 1 193 ARG 193 391 391 ARG ARG A . n A 1 194 ILE 194 392 392 ILE ILE A . n A 1 195 GLU 195 393 393 GLU GLU A . n A 1 196 LYS 196 394 394 LYS ALA A . n A 1 197 TYR 197 395 395 TYR TYR A . n A 1 198 GLN 198 396 396 GLN GLN A . n A 1 199 ASP 199 397 397 ASP ASP A . n A 1 200 SER 200 398 398 SER SER A . n A 1 201 PHE 201 399 399 PHE PHE A . n A 1 202 LEU 202 400 400 LEU LEU A . n A 1 203 LEU 203 401 401 LEU LEU A . n A 1 204 ALA 204 402 402 ALA ALA A . n A 1 205 PHE 205 403 403 PHE PHE A . n A 1 206 GLU 206 404 404 GLU GLU A . n A 1 207 HIS 207 405 405 HIS HIS A . n A 1 208 TYR 208 406 406 TYR TYR A . n A 1 209 ILE 209 407 407 ILE ILE A . n A 1 210 ASN 210 408 408 ASN ASN A . n A 1 211 TYR 211 409 409 TYR TYR A . n A 1 212 ARG 212 410 410 ARG ARG A . n A 1 213 LYS 213 411 411 LYS LYS A . n A 1 214 HIS 214 412 412 HIS HIS A . n A 1 215 HIS 215 413 413 HIS HIS A . n A 1 216 VAL 216 414 414 VAL VAL A . n A 1 217 THR 217 415 415 THR THR A . n A 1 218 HIS 218 416 416 HIS HIS A . n A 1 219 PHE 219 417 417 PHE PHE A . n A 1 220 TRP 220 418 418 TRP TRP A . n A 1 221 PRO 221 419 419 PRO PRO A . n A 1 222 LYS 222 420 420 LYS LYS A . n A 1 223 LEU 223 421 421 LEU LEU A . n A 1 224 LEU 224 422 422 LEU LEU A . n A 1 225 MET 225 423 423 MET MET A . n A 1 226 LYS 226 424 424 LYS LYS A . n A 1 227 VAL 227 425 425 VAL VAL A . n A 1 228 THR 228 426 426 THR THR A . n A 1 229 ASP 229 427 427 ASP ASP A . n A 1 230 LEU 230 428 428 LEU LEU A . n A 1 231 ARG 231 429 429 ARG ARG A . n A 1 232 MET 232 430 430 MET MET A . n A 1 233 ILE 233 431 431 ILE ILE A . n A 1 234 GLY 234 432 432 GLY GLY A . n A 1 235 ALA 235 433 433 ALA ALA A . n A 1 236 CYS 236 434 434 CYS CYS A . n A 1 237 HIS 237 435 435 HIS HIS A . n A 1 238 ALA 238 436 436 ALA ALA A . n A 1 239 SER 239 437 437 SER SER A . n A 1 240 ARG 240 438 438 ARG ARG A . n A 1 241 PHE 241 439 439 PHE PHE A . n A 1 242 LEU 242 440 440 LEU LEU A . n A 1 243 HIS 243 441 441 HIS HIS A . n A 1 244 MET 244 442 442 MET MET A . n A 1 245 LYS 245 443 443 LYS LYS A . n A 1 246 VAL 246 444 444 VAL VAL A . n A 1 247 GLU 247 445 445 GLU ALA A . n A 1 248 CYS 248 446 446 CYS CYS A . n A 1 249 PRO 249 447 447 PRO PRO A . n A 1 250 THR 250 448 448 THR ALA A . n A 1 251 GLU 251 449 449 GLU ALA A . n A 1 252 LEU 252 450 450 LEU LEU A . n A 1 253 PHE 253 451 451 PHE PHE A . n A 1 254 PRO 254 452 452 PRO PRO A . n A 1 255 PRO 255 453 453 PRO PRO A . n A 1 256 LEU 256 454 454 LEU LEU A . n A 1 257 PHE 257 455 455 PHE PHE A . n A 1 258 LEU 258 456 456 LEU LEU A . n A 1 259 GLU 259 457 457 GLU ALA A . n A 1 260 VAL 260 458 458 VAL VAL A . n A 1 261 PHE 261 459 459 PHE PHE A . n A 1 262 GLU 262 460 460 GLU GLU A . n A 1 263 ASP 263 461 461 ASP ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4HY 1 500 500 4HY TRI A . C 3 ARS 1 600 600 ARS AS A . D 3 ARS 1 601 601 ARS AS A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 203 ? CG ? A GLU 5 CG 2 1 Y 1 A GLU 203 ? CD ? A GLU 5 CD 3 1 Y 1 A GLU 203 ? OE1 ? A GLU 5 OE1 4 1 Y 1 A GLU 203 ? OE2 ? A GLU 5 OE2 5 1 Y 1 A HIS 210 ? CG ? A HIS 12 CG 6 1 Y 1 A HIS 210 ? ND1 ? A HIS 12 ND1 7 1 Y 1 A HIS 210 ? CD2 ? A HIS 12 CD2 8 1 Y 1 A HIS 210 ? CE1 ? A HIS 12 CE1 9 1 Y 1 A HIS 210 ? NE2 ? A HIS 12 NE2 10 1 Y 1 A GLU 217 ? CG ? A GLU 19 CG 11 1 Y 1 A GLU 217 ? CD ? A GLU 19 CD 12 1 Y 1 A GLU 217 ? OE1 ? A GLU 19 OE1 13 1 Y 1 A GLU 217 ? OE2 ? A GLU 19 OE2 14 1 Y 1 A GLU 227 ? CG ? A GLU 29 CG 15 1 Y 1 A GLU 227 ? CD ? A GLU 29 CD 16 1 Y 1 A GLU 227 ? OE1 ? A GLU 29 OE1 17 1 Y 1 A GLU 227 ? OE2 ? A GLU 29 OE2 18 1 Y 1 A GLN 235 ? CG ? A GLN 37 CG 19 1 Y 1 A GLN 235 ? CD ? A GLN 37 CD 20 1 Y 1 A GLN 235 ? OE1 ? A GLN 37 OE1 21 1 Y 1 A GLN 235 ? NE2 ? A GLN 37 NE2 22 1 Y 1 A SER 237 ? OG ? A SER 39 OG 23 1 Y 1 A GLN 241 ? CG ? A GLN 43 CG 24 1 Y 1 A GLN 241 ? CD ? A GLN 43 CD 25 1 Y 1 A GLN 241 ? OE1 ? A GLN 43 OE1 26 1 Y 1 A GLN 241 ? NE2 ? A GLN 43 NE2 27 1 Y 1 A LYS 263 ? CG ? A LYS 65 CG 28 1 Y 1 A LYS 263 ? CD ? A LYS 65 CD 29 1 Y 1 A LYS 263 ? CE ? A LYS 65 CE 30 1 Y 1 A LYS 263 ? NZ ? A LYS 65 NZ 31 1 Y 1 A LYS 274 ? CG ? A LYS 76 CG 32 1 Y 1 A LYS 274 ? CD ? A LYS 76 CD 33 1 Y 1 A LYS 274 ? CE ? A LYS 76 CE 34 1 Y 1 A LYS 274 ? NZ ? A LYS 76 NZ 35 1 Y 1 A GLU 324 ? CG ? A GLU 126 CG 36 1 Y 1 A GLU 324 ? CD ? A GLU 126 CD 37 1 Y 1 A GLU 324 ? OE1 ? A GLU 126 OE1 38 1 Y 1 A GLU 324 ? OE2 ? A GLU 126 OE2 39 1 Y 1 A GLU 390 ? CG ? A GLU 192 CG 40 1 Y 1 A GLU 390 ? CD ? A GLU 192 CD 41 1 Y 1 A GLU 390 ? OE1 ? A GLU 192 OE1 42 1 Y 1 A GLU 390 ? OE2 ? A GLU 192 OE2 43 1 Y 1 A LYS 394 ? CG ? A LYS 196 CG 44 1 Y 1 A LYS 394 ? CD ? A LYS 196 CD 45 1 Y 1 A LYS 394 ? CE ? A LYS 196 CE 46 1 Y 1 A LYS 394 ? NZ ? A LYS 196 NZ 47 1 Y 1 A GLU 445 ? CG ? A GLU 247 CG 48 1 Y 1 A GLU 445 ? CD ? A GLU 247 CD 49 1 Y 1 A GLU 445 ? OE1 ? A GLU 247 OE1 50 1 Y 1 A GLU 445 ? OE2 ? A GLU 247 OE2 51 1 Y 1 A THR 448 ? OG1 ? A THR 250 OG1 52 1 Y 1 A THR 448 ? CG2 ? A THR 250 CG2 53 1 Y 1 A GLU 449 ? CG ? A GLU 251 CG 54 1 Y 1 A GLU 449 ? CD ? A GLU 251 CD 55 1 Y 1 A GLU 449 ? OE1 ? A GLU 251 OE1 56 1 Y 1 A GLU 449 ? OE2 ? A GLU 251 OE2 57 1 Y 1 A GLU 457 ? CG ? A GLU 259 CG 58 1 Y 1 A GLU 457 ? CD ? A GLU 259 CD 59 1 Y 1 A GLU 457 ? OE1 ? A GLU 259 OE1 60 1 Y 1 A GLU 457 ? OE2 ? A GLU 259 OE2 61 1 Y 1 A ASP 461 ? CG ? A ASP 263 CG 62 1 Y 1 A ASP 461 ? OD1 ? A ASP 263 OD1 63 1 Y 1 A ASP 461 ? OD2 ? A ASP 263 OD2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 CNS phasing . ? 4 # _cell.entry_id 1NQ1 _cell.length_a 68.839 _cell.length_b 68.839 _cell.length_c 130.530 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NQ1 _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # _exptl.entry_id 1NQ1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.01 _exptl_crystal.density_percent_sol 59.14 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.6 _exptl_crystal_grow.pdbx_details '700 mM sodium acetate, 100mM Sodium Cacodylate, pH 7.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 120 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details 'Flat mirror, bent monochromator' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'bent monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-1' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97 # _reflns.entry_id 1NQ1 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 80 _reflns.number_all 57150 _reflns.number_obs 57101 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value 0.062 _reflns.pdbx_netI_over_sigmaI 22.3 _reflns.B_iso_Wilson_estimate 41.7 _reflns.pdbx_redundancy 6.848 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1NQ1 _refine.ls_d_res_high 2.9 _refine.ls_d_res_low 30 _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_ls_sigma_I 2.0 _refine.ls_number_reflns_all 8372 _refine.ls_number_reflns_obs 8345 _refine.ls_number_reflns_R_free 890 _refine.ls_percent_reflns_obs 99.7 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.239 _refine.ls_R_factor_R_free 0.287 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'THYROID HORMONE RECEPTOR BETA WITH TRIAC BOUND (unpublished data)' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ISOTROPIC _refine.B_iso_mean 16.144 _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1949 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1972 _refine_hist.d_res_high 2.9 _refine_hist.d_res_low 30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.008932 ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.42473 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1NQ1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1NQ1 _struct.title ;TR Receptor Mutations Conferring Hormone Resistance and Reduced Corepressor Release Exhibit Decreased Stability in the Nterminal LBD ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NQ1 _struct_keywords.pdbx_keywords 'HORMONE/GROWTH FACTOR RECEPTOR' _struct_keywords.text 'ALPHA HELICAL, LIGAND BINDING DOMAIN, HORMONE-GROWTH FACTOR RECEPTOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code THB1_HUMAN _struct_ref.pdbx_db_accession P10828 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAIT RVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLS SFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLH MKVECPTELFPPLFLEVFED ; _struct_ref.pdbx_align_begin 199 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1NQ1 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 263 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10828 _struct_ref_seq.db_align_beg 202 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 461 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 202 _struct_ref_seq.pdbx_auth_seq_align_end 461 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1NQ1 ALA A 1 ? UNP P10828 ? ? 'cloning artifact' 199 1 1 1NQ1 ALA A 2 ? UNP P10828 ? ? 'cloning artifact' 200 2 1 1NQ1 MET A 3 ? UNP P10828 ? ? 'cloning artifact' 201 3 1 1NQ1 GLN A 45 ? UNP P10828 ARG 240 'engineered mutation' 243 4 1 1NQ1 ASP A 50 ? UNP P10828 GLU 245 conflict 248 5 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 3840 ? 2 MORE -44 ? 2 'SSA (A^2)' 22410 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2 A,B,C,D # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_765 -x+2,-x+y+1,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 103.2585000000 -0.8660254038 0.5000000000 0.0000000000 59.6163227711 0.0000000000 0.0000000000 -1.0000000000 43.5100000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 1 ? GLY A 11 ? ALA A 199 GLY A 209 1 ? 11 HELX_P HELX_P2 2 THR A 17 ? THR A 34 ? THR A 215 THR A 232 1 ? 18 HELX_P HELX_P3 3 ASP A 67 ? ILE A 77 ? ASP A 265 ILE A 275 1 ? 11 HELX_P HELX_P4 4 ILE A 77 ? LYS A 91 ? ILE A 275 LYS A 289 1 ? 15 HELX_P HELX_P5 5 LEU A 92 ? GLU A 97 ? LEU A 290 GLU A 295 1 ? 6 HELX_P HELX_P6 6 PRO A 99 ? VAL A 121 ? PRO A 297 VAL A 319 1 ? 23 HELX_P HELX_P7 7 THR A 139 ? GLY A 146 ? THR A 337 GLY A 344 1 ? 8 HELX_P HELX_P8 8 GLY A 149 ? LEU A 162 ? GLY A 347 LEU A 360 1 ? 14 HELX_P HELX_P9 9 ASP A 168 ? MET A 181 ? ASP A 366 MET A 379 1 ? 14 HELX_P HELX_P10 10 VAL A 191 ? LYS A 213 ? VAL A 389 LYS A 411 1 ? 23 HELX_P HELX_P11 11 HIS A 218 ? CYS A 248 ? HIS A 416 CYS A 446 1 ? 31 HELX_P HELX_P12 12 PRO A 254 ? PHE A 261 ? PRO A 452 PHE A 459 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 236 SG ? ? ? 1_555 C ARS . AS ? ? A CYS 434 A ARS 600 1_555 ? ? ? ? ? ? ? 3.060 ? ? metalc2 metalc ? ? A CYS 236 SG ? ? ? 6_765 D ARS . AS ? ? A CYS 434 A ARS 601 1_555 ? ? ? ? ? ? ? 3.145 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 46 ? PHE A 47 ? LYS A 244 PHE A 245 A 2 MET A 136 ? VAL A 138 ? MET A 334 VAL A 336 A 3 LEU A 130 ? LEU A 132 ? LEU A 328 LEU A 330 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 46 ? N LYS A 244 O ALA A 137 ? O ALA A 335 A 2 3 O MET A 136 ? O MET A 334 N LEU A 132 ? N LEU A 330 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 4HY 500 ? 11 'BINDING SITE FOR RESIDUE 4HY A 500' AC2 Software A ARS 600 ? 2 'BINDING SITE FOR RESIDUE ARS A 600' AC3 Software A ARS 601 ? 1 'BINDING SITE FOR RESIDUE ARS A 601' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 ILE A 78 ? ILE A 276 . ? 1_555 ? 2 AC1 11 MET A 115 ? MET A 313 . ? 1_555 ? 3 AC1 11 ALA A 119 ? ALA A 317 . ? 1_555 ? 4 AC1 11 ARG A 122 ? ARG A 320 . ? 1_555 ? 5 AC1 11 LEU A 132 ? LEU A 330 . ? 1_555 ? 6 AC1 11 ASN A 133 ? ASN A 331 . ? 1_555 ? 7 AC1 11 GLY A 146 ? GLY A 344 . ? 1_555 ? 8 AC1 11 ILE A 155 ? ILE A 353 . ? 1_555 ? 9 AC1 11 HIS A 237 ? HIS A 435 . ? 1_555 ? 10 AC1 11 MET A 244 ? MET A 442 . ? 1_555 ? 11 AC1 11 PHE A 257 ? PHE A 455 . ? 1_555 ? 12 AC2 2 ASP A 229 ? ASP A 427 . ? 6_765 ? 13 AC2 2 CYS A 236 ? CYS A 434 . ? 1_555 ? 14 AC3 1 CYS A 236 ? CYS A 434 . ? 6_765 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 207 ? ? -37.68 -37.99 2 1 ALA A 234 ? ? -83.29 -142.85 3 1 SER A 237 ? ? 148.06 71.18 4 1 LYS A 240 ? ? 96.94 93.82 5 1 GLN A 241 ? ? 63.08 132.20 6 1 LYS A 242 ? ? 168.67 -42.16 7 1 LYS A 244 ? ? -111.10 75.98 8 1 PHE A 245 ? ? -38.29 114.70 9 1 PHE A 269 ? ? -38.64 -35.51 10 1 PHE A 272 ? ? -58.26 -78.32 11 1 ASN A 331 ? ? 53.44 15.71 12 1 GLU A 333 ? ? -120.28 -69.65 13 1 VAL A 348 ? ? -57.66 -8.11 14 1 MET A 379 ? ? -79.64 43.24 15 1 SER A 381 ? ? -66.07 3.07 16 1 ALA A 387 ? ? -96.18 -64.33 17 1 LYS A 411 ? ? 32.72 90.19 18 1 HIS A 413 ? ? -102.42 67.77 19 1 PRO A 447 ? ? -59.88 -171.91 20 1 PRO A 452 ? ? -34.24 149.32 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 253 ? A ALA 55 2 1 Y 1 A PRO 254 ? A PRO 56 3 1 Y 1 A ILE 255 ? A ILE 57 4 1 Y 1 A VAL 256 ? A VAL 58 5 1 Y 1 A ASN 257 ? A ASN 59 6 1 Y 1 A ALA 258 ? A ALA 60 7 1 Y 1 A PRO 259 ? A PRO 61 8 1 Y 1 A GLU 260 ? A GLU 62 9 1 Y 1 A GLY 261 ? A GLY 63 10 1 Y 1 A GLY 262 ? A GLY 64 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 4HY C1 C Y N 1 4HY C2 C Y N 2 4HY C3 C Y N 3 4HY C4 C Y N 4 4HY C5 C Y N 5 4HY C6 C Y N 6 4HY C7 C Y N 7 4HY C8 C Y N 8 4HY C9 C Y N 9 4HY C10 C Y N 10 4HY C11 C Y N 11 4HY C12 C Y N 12 4HY C13 C N N 13 4HY C14 C N N 14 4HY I1 I N N 15 4HY I2 I N N 16 4HY I3 I N N 17 4HY O3 O N N 18 4HY O2 O N N 19 4HY O1 O N N 20 4HY O4 O N N 21 4HY HC31 H N N 22 4HY HC41 H N N 23 4HY H101 H N N 24 4HY H111 H N N 25 4HY H121 H N N 26 4HY H131 H N N 27 4HY H132 H N N 28 4HY HO11 H N N 29 4HY HO41 H N N 30 ALA N N N N 31 ALA CA C N S 32 ALA C C N N 33 ALA O O N N 34 ALA CB C N N 35 ALA OXT O N N 36 ALA H H N N 37 ALA H2 H N N 38 ALA HA H N N 39 ALA HB1 H N N 40 ALA HB2 H N N 41 ALA HB3 H N N 42 ALA HXT H N N 43 ARG N N N N 44 ARG CA C N S 45 ARG C C N N 46 ARG O O N N 47 ARG CB C N N 48 ARG CG C N N 49 ARG CD C N N 50 ARG NE N N N 51 ARG CZ C N N 52 ARG NH1 N N N 53 ARG NH2 N N N 54 ARG OXT O N N 55 ARG H H N N 56 ARG H2 H N N 57 ARG HA H N N 58 ARG HB2 H N N 59 ARG HB3 H N N 60 ARG HG2 H N N 61 ARG HG3 H N N 62 ARG HD2 H N N 63 ARG HD3 H N N 64 ARG HE H N N 65 ARG HH11 H N N 66 ARG HH12 H N N 67 ARG HH21 H N N 68 ARG HH22 H N N 69 ARG HXT H N N 70 ARS AS AS N N 71 ASN N N N N 72 ASN CA C N S 73 ASN C C N N 74 ASN O O N N 75 ASN CB C N N 76 ASN CG C N N 77 ASN OD1 O N N 78 ASN ND2 N N N 79 ASN OXT O N N 80 ASN H H N N 81 ASN H2 H N N 82 ASN HA H N N 83 ASN HB2 H N N 84 ASN HB3 H N N 85 ASN HD21 H N N 86 ASN HD22 H N N 87 ASN HXT H N N 88 ASP N N N N 89 ASP CA C N S 90 ASP C C N N 91 ASP O O N N 92 ASP CB C N N 93 ASP CG C N N 94 ASP OD1 O N N 95 ASP OD2 O N N 96 ASP OXT O N N 97 ASP H H N N 98 ASP H2 H N N 99 ASP HA H N N 100 ASP HB2 H N N 101 ASP HB3 H N N 102 ASP HD2 H N N 103 ASP HXT H N N 104 CYS N N N N 105 CYS CA C N R 106 CYS C C N N 107 CYS O O N N 108 CYS CB C N N 109 CYS SG S N N 110 CYS OXT O N N 111 CYS H H N N 112 CYS H2 H N N 113 CYS HA H N N 114 CYS HB2 H N N 115 CYS HB3 H N N 116 CYS HG H N N 117 CYS HXT H N N 118 GLN N N N N 119 GLN CA C N S 120 GLN C C N N 121 GLN O O N N 122 GLN CB C N N 123 GLN CG C N N 124 GLN CD C N N 125 GLN OE1 O N N 126 GLN NE2 N N N 127 GLN OXT O N N 128 GLN H H N N 129 GLN H2 H N N 130 GLN HA H N N 131 GLN HB2 H N N 132 GLN HB3 H N N 133 GLN HG2 H N N 134 GLN HG3 H N N 135 GLN HE21 H N N 136 GLN HE22 H N N 137 GLN HXT H N N 138 GLU N N N N 139 GLU CA C N S 140 GLU C C N N 141 GLU O O N N 142 GLU CB C N N 143 GLU CG C N N 144 GLU CD C N N 145 GLU OE1 O N N 146 GLU OE2 O N N 147 GLU OXT O N N 148 GLU H H N N 149 GLU H2 H N N 150 GLU HA H N N 151 GLU HB2 H N N 152 GLU HB3 H N N 153 GLU HG2 H N N 154 GLU HG3 H N N 155 GLU HE2 H N N 156 GLU HXT H N N 157 GLY N N N N 158 GLY CA C N N 159 GLY C C N N 160 GLY O O N N 161 GLY OXT O N N 162 GLY H H N N 163 GLY H2 H N N 164 GLY HA2 H N N 165 GLY HA3 H N N 166 GLY HXT H N N 167 HIS N N N N 168 HIS CA C N S 169 HIS C C N N 170 HIS O O N N 171 HIS CB C N N 172 HIS CG C Y N 173 HIS ND1 N Y N 174 HIS CD2 C Y N 175 HIS CE1 C Y N 176 HIS NE2 N Y N 177 HIS OXT O N N 178 HIS H H N N 179 HIS H2 H N N 180 HIS HA H N N 181 HIS HB2 H N N 182 HIS HB3 H N N 183 HIS HD1 H N N 184 HIS HD2 H N N 185 HIS HE1 H N N 186 HIS HE2 H N N 187 HIS HXT H N N 188 ILE N N N N 189 ILE CA C N S 190 ILE C C N N 191 ILE O O N N 192 ILE CB C N S 193 ILE CG1 C N N 194 ILE CG2 C N N 195 ILE CD1 C N N 196 ILE OXT O N N 197 ILE H H N N 198 ILE H2 H N N 199 ILE HA H N N 200 ILE HB H N N 201 ILE HG12 H N N 202 ILE HG13 H N N 203 ILE HG21 H N N 204 ILE HG22 H N N 205 ILE HG23 H N N 206 ILE HD11 H N N 207 ILE HD12 H N N 208 ILE HD13 H N N 209 ILE HXT H N N 210 LEU N N N N 211 LEU CA C N S 212 LEU C C N N 213 LEU O O N N 214 LEU CB C N N 215 LEU CG C N N 216 LEU CD1 C N N 217 LEU CD2 C N N 218 LEU OXT O N N 219 LEU H H N N 220 LEU H2 H N N 221 LEU HA H N N 222 LEU HB2 H N N 223 LEU HB3 H N N 224 LEU HG H N N 225 LEU HD11 H N N 226 LEU HD12 H N N 227 LEU HD13 H N N 228 LEU HD21 H N N 229 LEU HD22 H N N 230 LEU HD23 H N N 231 LEU HXT H N N 232 LYS N N N N 233 LYS CA C N S 234 LYS C C N N 235 LYS O O N N 236 LYS CB C N N 237 LYS CG C N N 238 LYS CD C N N 239 LYS CE C N N 240 LYS NZ N N N 241 LYS OXT O N N 242 LYS H H N N 243 LYS H2 H N N 244 LYS HA H N N 245 LYS HB2 H N N 246 LYS HB3 H N N 247 LYS HG2 H N N 248 LYS HG3 H N N 249 LYS HD2 H N N 250 LYS HD3 H N N 251 LYS HE2 H N N 252 LYS HE3 H N N 253 LYS HZ1 H N N 254 LYS HZ2 H N N 255 LYS HZ3 H N N 256 LYS HXT H N N 257 MET N N N N 258 MET CA C N S 259 MET C C N N 260 MET O O N N 261 MET CB C N N 262 MET CG C N N 263 MET SD S N N 264 MET CE C N N 265 MET OXT O N N 266 MET H H N N 267 MET H2 H N N 268 MET HA H N N 269 MET HB2 H N N 270 MET HB3 H N N 271 MET HG2 H N N 272 MET HG3 H N N 273 MET HE1 H N N 274 MET HE2 H N N 275 MET HE3 H N N 276 MET HXT H N N 277 PHE N N N N 278 PHE CA C N S 279 PHE C C N N 280 PHE O O N N 281 PHE CB C N N 282 PHE CG C Y N 283 PHE CD1 C Y N 284 PHE CD2 C Y N 285 PHE CE1 C Y N 286 PHE CE2 C Y N 287 PHE CZ C Y N 288 PHE OXT O N N 289 PHE H H N N 290 PHE H2 H N N 291 PHE HA H N N 292 PHE HB2 H N N 293 PHE HB3 H N N 294 PHE HD1 H N N 295 PHE HD2 H N N 296 PHE HE1 H N N 297 PHE HE2 H N N 298 PHE HZ H N N 299 PHE HXT H N N 300 PRO N N N N 301 PRO CA C N S 302 PRO C C N N 303 PRO O O N N 304 PRO CB C N N 305 PRO CG C N N 306 PRO CD C N N 307 PRO OXT O N N 308 PRO H H N N 309 PRO HA H N N 310 PRO HB2 H N N 311 PRO HB3 H N N 312 PRO HG2 H N N 313 PRO HG3 H N N 314 PRO HD2 H N N 315 PRO HD3 H N N 316 PRO HXT H N N 317 SER N N N N 318 SER CA C N S 319 SER C C N N 320 SER O O N N 321 SER CB C N N 322 SER OG O N N 323 SER OXT O N N 324 SER H H N N 325 SER H2 H N N 326 SER HA H N N 327 SER HB2 H N N 328 SER HB3 H N N 329 SER HG H N N 330 SER HXT H N N 331 THR N N N N 332 THR CA C N S 333 THR C C N N 334 THR O O N N 335 THR CB C N R 336 THR OG1 O N N 337 THR CG2 C N N 338 THR OXT O N N 339 THR H H N N 340 THR H2 H N N 341 THR HA H N N 342 THR HB H N N 343 THR HG1 H N N 344 THR HG21 H N N 345 THR HG22 H N N 346 THR HG23 H N N 347 THR HXT H N N 348 TRP N N N N 349 TRP CA C N S 350 TRP C C N N 351 TRP O O N N 352 TRP CB C N N 353 TRP CG C Y N 354 TRP CD1 C Y N 355 TRP CD2 C Y N 356 TRP NE1 N Y N 357 TRP CE2 C Y N 358 TRP CE3 C Y N 359 TRP CZ2 C Y N 360 TRP CZ3 C Y N 361 TRP CH2 C Y N 362 TRP OXT O N N 363 TRP H H N N 364 TRP H2 H N N 365 TRP HA H N N 366 TRP HB2 H N N 367 TRP HB3 H N N 368 TRP HD1 H N N 369 TRP HE1 H N N 370 TRP HE3 H N N 371 TRP HZ2 H N N 372 TRP HZ3 H N N 373 TRP HH2 H N N 374 TRP HXT H N N 375 TYR N N N N 376 TYR CA C N S 377 TYR C C N N 378 TYR O O N N 379 TYR CB C N N 380 TYR CG C Y N 381 TYR CD1 C Y N 382 TYR CD2 C Y N 383 TYR CE1 C Y N 384 TYR CE2 C Y N 385 TYR CZ C Y N 386 TYR OH O N N 387 TYR OXT O N N 388 TYR H H N N 389 TYR H2 H N N 390 TYR HA H N N 391 TYR HB2 H N N 392 TYR HB3 H N N 393 TYR HD1 H N N 394 TYR HD2 H N N 395 TYR HE1 H N N 396 TYR HE2 H N N 397 TYR HH H N N 398 TYR HXT H N N 399 VAL N N N N 400 VAL CA C N S 401 VAL C C N N 402 VAL O O N N 403 VAL CB C N N 404 VAL CG1 C N N 405 VAL CG2 C N N 406 VAL OXT O N N 407 VAL H H N N 408 VAL H2 H N N 409 VAL HA H N N 410 VAL HB H N N 411 VAL HG11 H N N 412 VAL HG12 H N N 413 VAL HG13 H N N 414 VAL HG21 H N N 415 VAL HG22 H N N 416 VAL HG23 H N N 417 VAL HXT H N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4HY C1 C3 doub Y N 1 4HY C1 C11 sing Y N 2 4HY C1 C13 sing N N 3 4HY C2 C4 doub Y N 4 4HY C2 C12 sing Y N 5 4HY C2 O2 sing N N 6 4HY C3 C5 sing Y N 7 4HY C3 HC31 sing N N 8 4HY C4 C6 sing Y N 9 4HY C4 HC41 sing N N 10 4HY C5 C7 doub Y N 11 4HY C5 I1 sing N N 12 4HY C6 C8 doub Y N 13 4HY C6 I2 sing N N 14 4HY C7 C9 sing Y N 15 4HY C7 O2 sing N N 16 4HY C8 C10 sing Y N 17 4HY C8 O1 sing N N 18 4HY C9 C11 doub Y N 19 4HY C9 I3 sing N N 20 4HY C10 C12 doub Y N 21 4HY C10 H101 sing N N 22 4HY C11 H111 sing N N 23 4HY C12 H121 sing N N 24 4HY C13 C14 sing N N 25 4HY C13 H131 sing N N 26 4HY C13 H132 sing N N 27 4HY C14 O3 doub N N 28 4HY C14 O4 sing N N 29 4HY O1 HO11 sing N N 30 4HY O4 HO41 sing N N 31 ALA N CA sing N N 32 ALA N H sing N N 33 ALA N H2 sing N N 34 ALA CA C sing N N 35 ALA CA CB sing N N 36 ALA CA HA sing N N 37 ALA C O doub N N 38 ALA C OXT sing N N 39 ALA CB HB1 sing N N 40 ALA CB HB2 sing N N 41 ALA CB HB3 sing N N 42 ALA OXT HXT sing N N 43 ARG N CA sing N N 44 ARG N H sing N N 45 ARG N H2 sing N N 46 ARG CA C sing N N 47 ARG CA CB sing N N 48 ARG CA HA sing N N 49 ARG C O doub N N 50 ARG C OXT sing N N 51 ARG CB CG sing N N 52 ARG CB HB2 sing N N 53 ARG CB HB3 sing N N 54 ARG CG CD sing N N 55 ARG CG HG2 sing N N 56 ARG CG HG3 sing N N 57 ARG CD NE sing N N 58 ARG CD HD2 sing N N 59 ARG CD HD3 sing N N 60 ARG NE CZ sing N N 61 ARG NE HE sing N N 62 ARG CZ NH1 sing N N 63 ARG CZ NH2 doub N N 64 ARG NH1 HH11 sing N N 65 ARG NH1 HH12 sing N N 66 ARG NH2 HH21 sing N N 67 ARG NH2 HH22 sing N N 68 ARG OXT HXT sing N N 69 ASN N CA sing N N 70 ASN N H sing N N 71 ASN N H2 sing N N 72 ASN CA C sing N N 73 ASN CA CB sing N N 74 ASN CA HA sing N N 75 ASN C O doub N N 76 ASN C OXT sing N N 77 ASN CB CG sing N N 78 ASN CB HB2 sing N N 79 ASN CB HB3 sing N N 80 ASN CG OD1 doub N N 81 ASN CG ND2 sing N N 82 ASN ND2 HD21 sing N N 83 ASN ND2 HD22 sing N N 84 ASN OXT HXT sing N N 85 ASP N CA sing N N 86 ASP N H sing N N 87 ASP N H2 sing N N 88 ASP CA C sing N N 89 ASP CA CB sing N N 90 ASP CA HA sing N N 91 ASP C O doub N N 92 ASP C OXT sing N N 93 ASP CB CG sing N N 94 ASP CB HB2 sing N N 95 ASP CB HB3 sing N N 96 ASP CG OD1 doub N N 97 ASP CG OD2 sing N N 98 ASP OD2 HD2 sing N N 99 ASP OXT HXT sing N N 100 CYS N CA sing N N 101 CYS N H sing N N 102 CYS N H2 sing N N 103 CYS CA C sing N N 104 CYS CA CB sing N N 105 CYS CA HA sing N N 106 CYS C O doub N N 107 CYS C OXT sing N N 108 CYS CB SG sing N N 109 CYS CB HB2 sing N N 110 CYS CB HB3 sing N N 111 CYS SG HG sing N N 112 CYS OXT HXT sing N N 113 GLN N CA sing N N 114 GLN N H sing N N 115 GLN N H2 sing N N 116 GLN CA C sing N N 117 GLN CA CB sing N N 118 GLN CA HA sing N N 119 GLN C O doub N N 120 GLN C OXT sing N N 121 GLN CB CG sing N N 122 GLN CB HB2 sing N N 123 GLN CB HB3 sing N N 124 GLN CG CD sing N N 125 GLN CG HG2 sing N N 126 GLN CG HG3 sing N N 127 GLN CD OE1 doub N N 128 GLN CD NE2 sing N N 129 GLN NE2 HE21 sing N N 130 GLN NE2 HE22 sing N N 131 GLN OXT HXT sing N N 132 GLU N CA sing N N 133 GLU N H sing N N 134 GLU N H2 sing N N 135 GLU CA C sing N N 136 GLU CA CB sing N N 137 GLU CA HA sing N N 138 GLU C O doub N N 139 GLU C OXT sing N N 140 GLU CB CG sing N N 141 GLU CB HB2 sing N N 142 GLU CB HB3 sing N N 143 GLU CG CD sing N N 144 GLU CG HG2 sing N N 145 GLU CG HG3 sing N N 146 GLU CD OE1 doub N N 147 GLU CD OE2 sing N N 148 GLU OE2 HE2 sing N N 149 GLU OXT HXT sing N N 150 GLY N CA sing N N 151 GLY N H sing N N 152 GLY N H2 sing N N 153 GLY CA C sing N N 154 GLY CA HA2 sing N N 155 GLY CA HA3 sing N N 156 GLY C O doub N N 157 GLY C OXT sing N N 158 GLY OXT HXT sing N N 159 HIS N CA sing N N 160 HIS N H sing N N 161 HIS N H2 sing N N 162 HIS CA C sing N N 163 HIS CA CB sing N N 164 HIS CA HA sing N N 165 HIS C O doub N N 166 HIS C OXT sing N N 167 HIS CB CG sing N N 168 HIS CB HB2 sing N N 169 HIS CB HB3 sing N N 170 HIS CG ND1 sing Y N 171 HIS CG CD2 doub Y N 172 HIS ND1 CE1 doub Y N 173 HIS ND1 HD1 sing N N 174 HIS CD2 NE2 sing Y N 175 HIS CD2 HD2 sing N N 176 HIS CE1 NE2 sing Y N 177 HIS CE1 HE1 sing N N 178 HIS NE2 HE2 sing N N 179 HIS OXT HXT sing N N 180 ILE N CA sing N N 181 ILE N H sing N N 182 ILE N H2 sing N N 183 ILE CA C sing N N 184 ILE CA CB sing N N 185 ILE CA HA sing N N 186 ILE C O doub N N 187 ILE C OXT sing N N 188 ILE CB CG1 sing N N 189 ILE CB CG2 sing N N 190 ILE CB HB sing N N 191 ILE CG1 CD1 sing N N 192 ILE CG1 HG12 sing N N 193 ILE CG1 HG13 sing N N 194 ILE CG2 HG21 sing N N 195 ILE CG2 HG22 sing N N 196 ILE CG2 HG23 sing N N 197 ILE CD1 HD11 sing N N 198 ILE CD1 HD12 sing N N 199 ILE CD1 HD13 sing N N 200 ILE OXT HXT sing N N 201 LEU N CA sing N N 202 LEU N H sing N N 203 LEU N H2 sing N N 204 LEU CA C sing N N 205 LEU CA CB sing N N 206 LEU CA HA sing N N 207 LEU C O doub N N 208 LEU C OXT sing N N 209 LEU CB CG sing N N 210 LEU CB HB2 sing N N 211 LEU CB HB3 sing N N 212 LEU CG CD1 sing N N 213 LEU CG CD2 sing N N 214 LEU CG HG sing N N 215 LEU CD1 HD11 sing N N 216 LEU CD1 HD12 sing N N 217 LEU CD1 HD13 sing N N 218 LEU CD2 HD21 sing N N 219 LEU CD2 HD22 sing N N 220 LEU CD2 HD23 sing N N 221 LEU OXT HXT sing N N 222 LYS N CA sing N N 223 LYS N H sing N N 224 LYS N H2 sing N N 225 LYS CA C sing N N 226 LYS CA CB sing N N 227 LYS CA HA sing N N 228 LYS C O doub N N 229 LYS C OXT sing N N 230 LYS CB CG sing N N 231 LYS CB HB2 sing N N 232 LYS CB HB3 sing N N 233 LYS CG CD sing N N 234 LYS CG HG2 sing N N 235 LYS CG HG3 sing N N 236 LYS CD CE sing N N 237 LYS CD HD2 sing N N 238 LYS CD HD3 sing N N 239 LYS CE NZ sing N N 240 LYS CE HE2 sing N N 241 LYS CE HE3 sing N N 242 LYS NZ HZ1 sing N N 243 LYS NZ HZ2 sing N N 244 LYS NZ HZ3 sing N N 245 LYS OXT HXT sing N N 246 MET N CA sing N N 247 MET N H sing N N 248 MET N H2 sing N N 249 MET CA C sing N N 250 MET CA CB sing N N 251 MET CA HA sing N N 252 MET C O doub N N 253 MET C OXT sing N N 254 MET CB CG sing N N 255 MET CB HB2 sing N N 256 MET CB HB3 sing N N 257 MET CG SD sing N N 258 MET CG HG2 sing N N 259 MET CG HG3 sing N N 260 MET SD CE sing N N 261 MET CE HE1 sing N N 262 MET CE HE2 sing N N 263 MET CE HE3 sing N N 264 MET OXT HXT sing N N 265 PHE N CA sing N N 266 PHE N H sing N N 267 PHE N H2 sing N N 268 PHE CA C sing N N 269 PHE CA CB sing N N 270 PHE CA HA sing N N 271 PHE C O doub N N 272 PHE C OXT sing N N 273 PHE CB CG sing N N 274 PHE CB HB2 sing N N 275 PHE CB HB3 sing N N 276 PHE CG CD1 doub Y N 277 PHE CG CD2 sing Y N 278 PHE CD1 CE1 sing Y N 279 PHE CD1 HD1 sing N N 280 PHE CD2 CE2 doub Y N 281 PHE CD2 HD2 sing N N 282 PHE CE1 CZ doub Y N 283 PHE CE1 HE1 sing N N 284 PHE CE2 CZ sing Y N 285 PHE CE2 HE2 sing N N 286 PHE CZ HZ sing N N 287 PHE OXT HXT sing N N 288 PRO N CA sing N N 289 PRO N CD sing N N 290 PRO N H sing N N 291 PRO CA C sing N N 292 PRO CA CB sing N N 293 PRO CA HA sing N N 294 PRO C O doub N N 295 PRO C OXT sing N N 296 PRO CB CG sing N N 297 PRO CB HB2 sing N N 298 PRO CB HB3 sing N N 299 PRO CG CD sing N N 300 PRO CG HG2 sing N N 301 PRO CG HG3 sing N N 302 PRO CD HD2 sing N N 303 PRO CD HD3 sing N N 304 PRO OXT HXT sing N N 305 SER N CA sing N N 306 SER N H sing N N 307 SER N H2 sing N N 308 SER CA C sing N N 309 SER CA CB sing N N 310 SER CA HA sing N N 311 SER C O doub N N 312 SER C OXT sing N N 313 SER CB OG sing N N 314 SER CB HB2 sing N N 315 SER CB HB3 sing N N 316 SER OG HG sing N N 317 SER OXT HXT sing N N 318 THR N CA sing N N 319 THR N H sing N N 320 THR N H2 sing N N 321 THR CA C sing N N 322 THR CA CB sing N N 323 THR CA HA sing N N 324 THR C O doub N N 325 THR C OXT sing N N 326 THR CB OG1 sing N N 327 THR CB CG2 sing N N 328 THR CB HB sing N N 329 THR OG1 HG1 sing N N 330 THR CG2 HG21 sing N N 331 THR CG2 HG22 sing N N 332 THR CG2 HG23 sing N N 333 THR OXT HXT sing N N 334 TRP N CA sing N N 335 TRP N H sing N N 336 TRP N H2 sing N N 337 TRP CA C sing N N 338 TRP CA CB sing N N 339 TRP CA HA sing N N 340 TRP C O doub N N 341 TRP C OXT sing N N 342 TRP CB CG sing N N 343 TRP CB HB2 sing N N 344 TRP CB HB3 sing N N 345 TRP CG CD1 doub Y N 346 TRP CG CD2 sing Y N 347 TRP CD1 NE1 sing Y N 348 TRP CD1 HD1 sing N N 349 TRP CD2 CE2 doub Y N 350 TRP CD2 CE3 sing Y N 351 TRP NE1 CE2 sing Y N 352 TRP NE1 HE1 sing N N 353 TRP CE2 CZ2 sing Y N 354 TRP CE3 CZ3 doub Y N 355 TRP CE3 HE3 sing N N 356 TRP CZ2 CH2 doub Y N 357 TRP CZ2 HZ2 sing N N 358 TRP CZ3 CH2 sing Y N 359 TRP CZ3 HZ3 sing N N 360 TRP CH2 HH2 sing N N 361 TRP OXT HXT sing N N 362 TYR N CA sing N N 363 TYR N H sing N N 364 TYR N H2 sing N N 365 TYR CA C sing N N 366 TYR CA CB sing N N 367 TYR CA HA sing N N 368 TYR C O doub N N 369 TYR C OXT sing N N 370 TYR CB CG sing N N 371 TYR CB HB2 sing N N 372 TYR CB HB3 sing N N 373 TYR CG CD1 doub Y N 374 TYR CG CD2 sing Y N 375 TYR CD1 CE1 sing Y N 376 TYR CD1 HD1 sing N N 377 TYR CD2 CE2 doub Y N 378 TYR CD2 HD2 sing N N 379 TYR CE1 CZ doub Y N 380 TYR CE1 HE1 sing N N 381 TYR CE2 CZ sing Y N 382 TYR CE2 HE2 sing N N 383 TYR CZ OH sing N N 384 TYR OH HH sing N N 385 TYR OXT HXT sing N N 386 VAL N CA sing N N 387 VAL N H sing N N 388 VAL N H2 sing N N 389 VAL CA C sing N N 390 VAL CA CB sing N N 391 VAL CA HA sing N N 392 VAL C O doub N N 393 VAL C OXT sing N N 394 VAL CB CG1 sing N N 395 VAL CB CG2 sing N N 396 VAL CB HB sing N N 397 VAL CG1 HG11 sing N N 398 VAL CG1 HG12 sing N N 399 VAL CG1 HG13 sing N N 400 VAL CG2 HG21 sing N N 401 VAL CG2 HG22 sing N N 402 VAL CG2 HG23 sing N N 403 VAL OXT HXT sing N N 404 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'THYROID HORMONE RECEPTOR BETA WITH TRIAC BOUND (unpublished data)' # _atom_sites.entry_id 1NQ1 _atom_sites.fract_transf_matrix[1][1] 0.014527 _atom_sites.fract_transf_matrix[1][2] 0.008387 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016774 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007661 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol AS C I N O S # loop_