data_1NUO # _entry.id 1NUO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1NUO RCSB RCSB018220 WWPDB D_1000018220 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NUO _pdbx_database_status.recvd_initial_deposition_date 2003-01-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Huber, B.R.' 1 'Sandler, B.' 2 'West, B.L.' 3 'Cunha-Lima, S.T.' 4 'Nguyen, H.T.' 5 'Apriletti, J.W.' 6 'Baxter, J.D.' 7 'Fletterick, R.J.' 8 # _citation.id primary _citation.title 'Two resistance to thyroid hormone mutants with impaired hormone binding' _citation.journal_abbrev Mol.Endocrinol. _citation.journal_volume 17 _citation.page_first 643 _citation.page_last 652 _citation.year 2003 _citation.journal_id_ASTM MOENEN _citation.country US _citation.journal_id_ISSN 0888-8809 _citation.journal_id_CSD 2068 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12554782 _citation.pdbx_database_id_DOI 10.1210/me.2002-0095 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Huber, B.R.' 1 primary 'Sandler, B.' 2 primary 'West, B.L.' 3 primary 'Cunha-Lima, S.T.' 4 primary 'Nguyen, H.T.' 5 primary 'Apriletti, J.W.' 6 primary 'Baxter, J.D.' 7 primary 'Fletterick, R.J.' 8 # _cell.entry_id 1NUO _cell.length_a 67.274 _cell.length_b 67.274 _cell.length_c 130.121 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NUO _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Thyroid hormone receptor beta-1' 29509.123 1 ? ? 'LIGAND BINDING DOMAIN' ? 2 non-polymer syn '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' 621.932 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MEELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFLPDDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAI TRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLHAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFL HMKVECPTELFPPLFLEVFED ; _entity_poly.pdbx_seq_one_letter_code_can ;MEELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFLPDDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAI TRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLHAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFL HMKVECPTELFPPLFLEVFED ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 GLU n 1 4 LEU n 1 5 GLN n 1 6 LYS n 1 7 SER n 1 8 ILE n 1 9 GLY n 1 10 HIS n 1 11 LYS n 1 12 PRO n 1 13 GLU n 1 14 PRO n 1 15 THR n 1 16 ASP n 1 17 GLU n 1 18 GLU n 1 19 TRP n 1 20 GLU n 1 21 LEU n 1 22 ILE n 1 23 LYS n 1 24 THR n 1 25 VAL n 1 26 THR n 1 27 GLU n 1 28 ALA n 1 29 HIS n 1 30 VAL n 1 31 ALA n 1 32 THR n 1 33 ASN n 1 34 ALA n 1 35 GLN n 1 36 GLY n 1 37 SER n 1 38 HIS n 1 39 TRP n 1 40 LYS n 1 41 GLN n 1 42 LYS n 1 43 ARG n 1 44 LYS n 1 45 PHE n 1 46 LEU n 1 47 PRO n 1 48 ASP n 1 49 ASP n 1 50 ILE n 1 51 GLY n 1 52 GLN n 1 53 ALA n 1 54 PRO n 1 55 ILE n 1 56 VAL n 1 57 ASN n 1 58 ALA n 1 59 PRO n 1 60 GLU n 1 61 GLY n 1 62 GLY n 1 63 LYS n 1 64 VAL n 1 65 ASP n 1 66 LEU n 1 67 GLU n 1 68 ALA n 1 69 PHE n 1 70 SER n 1 71 HIS n 1 72 PHE n 1 73 THR n 1 74 LYS n 1 75 ILE n 1 76 ILE n 1 77 THR n 1 78 PRO n 1 79 ALA n 1 80 ILE n 1 81 THR n 1 82 ARG n 1 83 VAL n 1 84 VAL n 1 85 ASP n 1 86 PHE n 1 87 ALA n 1 88 LYS n 1 89 LYS n 1 90 LEU n 1 91 PRO n 1 92 MET n 1 93 PHE n 1 94 CYS n 1 95 GLU n 1 96 LEU n 1 97 PRO n 1 98 CYS n 1 99 GLU n 1 100 ASP n 1 101 GLN n 1 102 ILE n 1 103 ILE n 1 104 LEU n 1 105 LEU n 1 106 LYS n 1 107 GLY n 1 108 CYS n 1 109 CYS n 1 110 MET n 1 111 GLU n 1 112 ILE n 1 113 MET n 1 114 SER n 1 115 LEU n 1 116 HIS n 1 117 ALA n 1 118 ALA n 1 119 VAL n 1 120 ARG n 1 121 TYR n 1 122 ASP n 1 123 PRO n 1 124 GLU n 1 125 SER n 1 126 GLU n 1 127 THR n 1 128 LEU n 1 129 THR n 1 130 LEU n 1 131 ASN n 1 132 GLY n 1 133 GLU n 1 134 MET n 1 135 ALA n 1 136 VAL n 1 137 THR n 1 138 ARG n 1 139 GLY n 1 140 GLN n 1 141 LEU n 1 142 LYS n 1 143 ASN n 1 144 GLY n 1 145 GLY n 1 146 LEU n 1 147 GLY n 1 148 VAL n 1 149 VAL n 1 150 SER n 1 151 ASP n 1 152 ALA n 1 153 ILE n 1 154 PHE n 1 155 ASP n 1 156 LEU n 1 157 GLY n 1 158 MET n 1 159 SER n 1 160 LEU n 1 161 SER n 1 162 SER n 1 163 PHE n 1 164 ASN n 1 165 LEU n 1 166 ASP n 1 167 ASP n 1 168 THR n 1 169 GLU n 1 170 VAL n 1 171 ALA n 1 172 LEU n 1 173 LEU n 1 174 GLN n 1 175 ALA n 1 176 VAL n 1 177 LEU n 1 178 LEU n 1 179 MET n 1 180 SER n 1 181 SER n 1 182 ASP n 1 183 ARG n 1 184 PRO n 1 185 GLY n 1 186 LEU n 1 187 ALA n 1 188 CYS n 1 189 VAL n 1 190 GLU n 1 191 ARG n 1 192 ILE n 1 193 GLU n 1 194 LYS n 1 195 TYR n 1 196 GLN n 1 197 ASP n 1 198 SER n 1 199 PHE n 1 200 LEU n 1 201 LEU n 1 202 ALA n 1 203 PHE n 1 204 GLU n 1 205 HIS n 1 206 TYR n 1 207 ILE n 1 208 ASN n 1 209 TYR n 1 210 ARG n 1 211 LYS n 1 212 HIS n 1 213 HIS n 1 214 VAL n 1 215 THR n 1 216 HIS n 1 217 PHE n 1 218 TRP n 1 219 PRO n 1 220 LYS n 1 221 LEU n 1 222 LEU n 1 223 MET n 1 224 LYS n 1 225 VAL n 1 226 THR n 1 227 ASP n 1 228 LEU n 1 229 ARG n 1 230 MET n 1 231 ILE n 1 232 GLY n 1 233 ALA n 1 234 CYS n 1 235 HIS n 1 236 ALA n 1 237 SER n 1 238 ARG n 1 239 PHE n 1 240 LEU n 1 241 HIS n 1 242 MET n 1 243 LYS n 1 244 VAL n 1 245 GLU n 1 246 CYS n 1 247 PRO n 1 248 THR n 1 249 GLU n 1 250 LEU n 1 251 PHE n 1 252 PRO n 1 253 PRO n 1 254 LEU n 1 255 PHE n 1 256 LEU n 1 257 GLU n 1 258 VAL n 1 259 PHE n 1 260 GLU n 1 261 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'THRB OR NR1A2 OR ERBA2 OR THR1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 DE3 PLYSS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code THB1_HUMAN _struct_ref.pdbx_db_accession P10828 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAI TRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFL HMKVECPTELFPPLFLEVFED ; _struct_ref.pdbx_align_begin 201 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1NUO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 261 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P10828 _struct_ref_seq.db_align_beg 201 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 461 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 201 _struct_ref_seq.pdbx_auth_seq_align_end 461 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1NUO ASP A 48 ? UNP P10828 GLU 248 CONFLICT 247 1 1 1NUO HIS A 116 ? UNP P10828 ARG 316 VARIANT 316 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4HY non-polymer . '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' ? 'C14 H9 I3 O4' 621.932 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1NUO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.88 _exptl_crystal.density_percent_sol 57.28 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.6 _exptl_crystal_grow.pdbx_details '800 mM sodium acetate, 100mM Sodium Cacodylate, pH 7.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ;a front end, vertically collimating premirror, double-crystal silicon (111) monochromator with a fixed-height exit beam, toroidal focusing mirror ; # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double-crystal silicon (111) monochromator with a fixed-height exit beam' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97 # _reflns.entry_id 1NUO _reflns.observed_criterion_sigma_F 1.0 _reflns.observed_criterion_sigma_I 1.0 _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 20 _reflns.number_all 15464 _reflns.number_obs 14845 _reflns.percent_possible_obs 96.0 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_Rsym_value 0.099 _reflns.pdbx_netI_over_sigmaI 19.77 _reflns.B_iso_Wilson_estimate 61.9 _reflns.pdbx_redundancy 7.53 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1NUO _refine.ls_d_res_high 3.1 _refine.ls_d_res_low 20 _refine.pdbx_ls_sigma_F 1 _refine.pdbx_ls_sigma_I 1.0 _refine.ls_number_reflns_all 5669 _refine.ls_number_reflns_obs 5510 _refine.ls_number_reflns_R_free 683 _refine.ls_percent_reflns_obs 96.68 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.257 _refine.ls_R_factor_R_work 0.252 _refine.ls_R_factor_R_free 0.302 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'Thyroid Hormone Receptor Beta LBD with Triac bound (unpublished)' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model isotropic _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1887 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1908 _refine_hist.d_res_high 3.1 _refine_hist.d_res_low 20 # _struct.entry_id 1NUO _struct.title 'Two RTH Mutants with Impaired Hormone Binding' _struct.pdbx_descriptor 'Thyroid hormone receptor beta-1, [4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NUO _struct_keywords.pdbx_keywords 'HORMONE/GROWTH FACTOR RECEPTOR' _struct_keywords.text 'Alpha Helix, Nuclear Receptor, Ligand Binding Domain, HORMONE-GROWTH FACTOR RECEPTOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 1 ? ILE A 8 ? MET A 201 ILE A 208 1 ? 8 HELX_P HELX_P2 2 THR A 15 ? ALA A 31 ? THR A 215 ALA A 231 1 ? 17 HELX_P HELX_P3 3 HIS A 38 ? ARG A 43 ? HIS A 237 ARG A 242 1 ? 6 HELX_P HELX_P4 4 LEU A 66 ? ILE A 75 ? LEU A 266 ILE A 275 1 ? 10 HELX_P HELX_P5 5 ILE A 76 ? LEU A 90 ? ILE A 276 LEU A 290 1 ? 15 HELX_P HELX_P6 6 LEU A 90 ? GLU A 95 ? LEU A 290 GLU A 295 1 ? 6 HELX_P HELX_P7 7 PRO A 97 ? ARG A 120 ? PRO A 297 ARG A 320 1 ? 24 HELX_P HELX_P8 8 THR A 137 ? ASN A 143 ? THR A 337 ASN A 343 1 ? 7 HELX_P HELX_P9 9 GLY A 147 ? SER A 161 ? GLY A 347 SER A 361 1 ? 15 HELX_P HELX_P10 10 ASP A 166 ? MET A 179 ? ASP A 366 MET A 379 1 ? 14 HELX_P HELX_P11 11 CYS A 188 ? LYS A 211 ? CYS A 388 LYS A 411 1 ? 24 HELX_P HELX_P12 12 HIS A 216 ? VAL A 244 ? HIS A 416 VAL A 444 1 ? 29 HELX_P HELX_P13 13 PRO A 252 ? GLU A 260 ? PRO A 452 GLU A 460 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 44 ? PHE A 45 ? LYS A 243 PHE A 244 A 2 MET A 134 ? VAL A 136 ? MET A 334 VAL A 336 A 3 THR A 127 ? LEU A 130 ? THR A 327 LEU A 330 A 4 TYR A 121 ? ASP A 122 ? TYR A 321 ASP A 322 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 44 ? N LYS A 243 O ALA A 135 ? O ALA A 335 A 2 3 O MET A 134 ? O MET A 334 N LEU A 130 ? N LEU A 330 A 3 4 O THR A 127 ? O THR A 327 N ASP A 122 ? N ASP A 322 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 11 _struct_site.details 'BINDING SITE FOR RESIDUE 4HY A 500' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 PHE A 72 ? PHE A 272 . ? 1_555 ? 2 AC1 11 ILE A 76 ? ILE A 276 . ? 1_555 ? 3 AC1 11 ALA A 79 ? ALA A 279 . ? 1_555 ? 4 AC1 11 MET A 110 ? MET A 310 . ? 1_555 ? 5 AC1 11 MET A 113 ? MET A 313 . ? 1_555 ? 6 AC1 11 HIS A 116 ? HIS A 316 . ? 1_555 ? 7 AC1 11 ASN A 131 ? ASN A 331 . ? 1_555 ? 8 AC1 11 LEU A 146 ? LEU A 346 . ? 1_555 ? 9 AC1 11 ILE A 153 ? ILE A 353 . ? 1_555 ? 10 AC1 11 HIS A 235 ? HIS A 435 . ? 1_555 ? 11 AC1 11 PHE A 255 ? PHE A 455 . ? 1_555 ? # _database_PDB_matrix.entry_id 1NUO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NUO _atom_sites.fract_transf_matrix[1][1] 0.014865 _atom_sites.fract_transf_matrix[1][2] 0.008582 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017164 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007685 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 201 201 MET MET A . n A 1 2 GLU 2 202 202 GLU GLU A . n A 1 3 GLU 3 203 203 GLU ALA A . n A 1 4 LEU 4 204 204 LEU LEU A . n A 1 5 GLN 5 205 205 GLN GLN A . n A 1 6 LYS 6 206 206 LYS ALA A . n A 1 7 SER 7 207 207 SER SER A . n A 1 8 ILE 8 208 208 ILE ILE A . n A 1 9 GLY 9 209 209 GLY GLY A . n A 1 10 HIS 10 210 210 HIS ALA A . n A 1 11 LYS 11 211 211 LYS ALA A . n A 1 12 PRO 12 212 212 PRO PRO A . n A 1 13 GLU 13 213 213 GLU GLU A . n A 1 14 PRO 14 214 214 PRO PRO A . n A 1 15 THR 15 215 215 THR THR A . n A 1 16 ASP 16 216 216 ASP ALA A . n A 1 17 GLU 17 217 217 GLU ALA A . n A 1 18 GLU 18 218 218 GLU GLU A . n A 1 19 TRP 19 219 219 TRP TRP A . n A 1 20 GLU 20 220 220 GLU ALA A . n A 1 21 LEU 21 221 221 LEU LEU A . n A 1 22 ILE 22 222 222 ILE ILE A . n A 1 23 LYS 23 223 223 LYS ALA A . n A 1 24 THR 24 224 224 THR THR A . n A 1 25 VAL 25 225 225 VAL VAL A . n A 1 26 THR 26 226 226 THR THR A . n A 1 27 GLU 27 227 227 GLU ALA A . n A 1 28 ALA 28 228 228 ALA ALA A . n A 1 29 HIS 29 229 229 HIS HIS A . n A 1 30 VAL 30 230 230 VAL VAL A . n A 1 31 ALA 31 231 231 ALA ALA A . n A 1 32 THR 32 232 232 THR THR A . n A 1 33 ASN 33 233 233 ASN ASN A . n A 1 34 ALA 34 234 234 ALA ALA A . n A 1 35 GLN 35 234 ? ? ? A A n A 1 36 GLY 36 235 235 GLY GLY A . n A 1 37 SER 37 236 236 SER ALA A . n A 1 38 HIS 38 237 237 HIS HIS A . n A 1 39 TRP 39 238 238 TRP TRP A . n A 1 40 LYS 40 239 239 LYS LYS A . n A 1 41 GLN 41 240 240 GLN GLN A . n A 1 42 LYS 42 241 241 LYS ALA A . n A 1 43 ARG 43 242 242 ARG ARG A . n A 1 44 LYS 44 243 243 LYS LYS A . n A 1 45 PHE 45 244 244 PHE PHE A . n A 1 46 LEU 46 245 245 LEU LEU A . n A 1 47 PRO 47 246 246 PRO PRO A . n A 1 48 ASP 48 247 247 ASP ASP A . n A 1 49 ASP 49 248 248 ASP ASP A . n A 1 50 ILE 50 249 249 ILE ILE A . n A 1 51 GLY 51 250 250 GLY GLY A . n A 1 52 GLN 52 251 251 GLN ALA A . n A 1 53 ALA 53 253 ? ? ? A . n A 1 54 PRO 54 254 ? ? ? A . n A 1 55 ILE 55 255 ? ? ? A . n A 1 56 VAL 56 256 ? ? ? A . n A 1 57 ASN 57 257 ? ? ? A . n A 1 58 ALA 58 258 ? ? ? A . n A 1 59 PRO 59 259 ? ? ? A . n A 1 60 GLU 60 260 ? ? ? A . n A 1 61 GLY 61 261 ? ? ? A . n A 1 62 GLY 62 262 ? ? ? A . n A 1 63 LYS 63 263 ? ? ? A . n A 1 64 VAL 64 264 ? ? ? A . n A 1 65 ASP 65 265 265 ASP ASP A . n A 1 66 LEU 66 266 266 LEU LEU A . n A 1 67 GLU 67 267 267 GLU ALA A . n A 1 68 ALA 68 268 268 ALA ALA A . n A 1 69 PHE 69 269 269 PHE PHE A . n A 1 70 SER 70 270 270 SER SER A . n A 1 71 HIS 71 271 271 HIS HIS A . n A 1 72 PHE 72 272 272 PHE PHE A . n A 1 73 THR 73 273 273 THR THR A . n A 1 74 LYS 74 274 274 LYS ALA A . n A 1 75 ILE 75 275 275 ILE ILE A . n A 1 76 ILE 76 276 276 ILE ILE A . n A 1 77 THR 77 277 277 THR THR A . n A 1 78 PRO 78 278 278 PRO PRO A . n A 1 79 ALA 79 279 279 ALA ALA A . n A 1 80 ILE 80 280 280 ILE ILE A . n A 1 81 THR 81 281 281 THR ALA A . n A 1 82 ARG 82 282 282 ARG ALA A . n A 1 83 VAL 83 283 283 VAL VAL A . n A 1 84 VAL 84 284 284 VAL VAL A . n A 1 85 ASP 85 285 285 ASP ASP A . n A 1 86 PHE 86 286 286 PHE PHE A . n A 1 87 ALA 87 287 287 ALA ALA A . n A 1 88 LYS 88 288 288 LYS ALA A . n A 1 89 LYS 89 289 289 LYS LYS A . n A 1 90 LEU 90 290 290 LEU LEU A . n A 1 91 PRO 91 291 291 PRO PRO A . n A 1 92 MET 92 292 292 MET MET A . n A 1 93 PHE 93 293 293 PHE PHE A . n A 1 94 CYS 94 294 294 CYS CYS A . n A 1 95 GLU 95 295 295 GLU GLU A . n A 1 96 LEU 96 296 296 LEU LEU A . n A 1 97 PRO 97 297 297 PRO PRO A . n A 1 98 CYS 98 298 298 CYS CYS A . n A 1 99 GLU 99 299 299 GLU GLU A . n A 1 100 ASP 100 300 300 ASP ASP A . n A 1 101 GLN 101 301 301 GLN GLN A . n A 1 102 ILE 102 302 302 ILE ILE A . n A 1 103 ILE 103 303 303 ILE ILE A . n A 1 104 LEU 104 304 304 LEU LEU A . n A 1 105 LEU 105 305 305 LEU LEU A . n A 1 106 LYS 106 306 306 LYS LYS A . n A 1 107 GLY 107 307 307 GLY GLY A . n A 1 108 CYS 108 308 308 CYS CYS A . n A 1 109 CYS 109 309 309 CYS CYS A . n A 1 110 MET 110 310 310 MET MET A . n A 1 111 GLU 111 311 311 GLU GLU A . n A 1 112 ILE 112 312 312 ILE ILE A . n A 1 113 MET 113 313 313 MET MET A . n A 1 114 SER 114 314 314 SER SER A . n A 1 115 LEU 115 315 315 LEU LEU A . n A 1 116 HIS 116 316 316 HIS HIS A . n A 1 117 ALA 117 317 317 ALA ALA A . n A 1 118 ALA 118 318 318 ALA ALA A . n A 1 119 VAL 119 319 319 VAL VAL A . n A 1 120 ARG 120 320 320 ARG ARG A . n A 1 121 TYR 121 321 321 TYR TYR A . n A 1 122 ASP 122 322 322 ASP ALA A . n A 1 123 PRO 123 323 323 PRO PRO A . n A 1 124 GLU 124 324 324 GLU GLU A . n A 1 125 SER 125 325 325 SER SER A . n A 1 126 GLU 126 326 326 GLU GLU A . n A 1 127 THR 127 327 327 THR THR A . n A 1 128 LEU 128 328 328 LEU LEU A . n A 1 129 THR 129 329 329 THR THR A . n A 1 130 LEU 130 330 330 LEU LEU A . n A 1 131 ASN 131 331 331 ASN ASN A . n A 1 132 GLY 132 332 332 GLY GLY A . n A 1 133 GLU 133 333 333 GLU GLU A . n A 1 134 MET 134 334 334 MET MET A . n A 1 135 ALA 135 335 335 ALA ALA A . n A 1 136 VAL 136 336 336 VAL VAL A . n A 1 137 THR 137 337 337 THR THR A . n A 1 138 ARG 138 338 338 ARG ARG A . n A 1 139 GLY 139 339 339 GLY GLY A . n A 1 140 GLN 140 340 340 GLN GLN A . n A 1 141 LEU 141 341 341 LEU LEU A . n A 1 142 LYS 142 342 342 LYS LYS A . n A 1 143 ASN 143 343 343 ASN ASN A . n A 1 144 GLY 144 344 344 GLY GLY A . n A 1 145 GLY 145 345 345 GLY GLY A . n A 1 146 LEU 146 346 346 LEU LEU A . n A 1 147 GLY 147 347 347 GLY GLY A . n A 1 148 VAL 148 348 348 VAL VAL A . n A 1 149 VAL 149 349 349 VAL VAL A . n A 1 150 SER 150 350 350 SER SER A . n A 1 151 ASP 151 351 351 ASP ASP A . n A 1 152 ALA 152 352 352 ALA ALA A . n A 1 153 ILE 153 353 353 ILE ILE A . n A 1 154 PHE 154 354 354 PHE PHE A . n A 1 155 ASP 155 355 355 ASP ASP A . n A 1 156 LEU 156 356 356 LEU LEU A . n A 1 157 GLY 157 357 357 GLY GLY A . n A 1 158 MET 158 358 358 MET MET A . n A 1 159 SER 159 359 359 SER SER A . n A 1 160 LEU 160 360 360 LEU LEU A . n A 1 161 SER 161 361 361 SER SER A . n A 1 162 SER 162 362 362 SER SER A . n A 1 163 PHE 163 363 363 PHE PHE A . n A 1 164 ASN 164 364 364 ASN ASN A . n A 1 165 LEU 165 365 365 LEU LEU A . n A 1 166 ASP 166 366 366 ASP ASP A . n A 1 167 ASP 167 367 367 ASP ASP A . n A 1 168 THR 168 368 368 THR THR A . n A 1 169 GLU 169 369 369 GLU GLU A . n A 1 170 VAL 170 370 370 VAL VAL A . n A 1 171 ALA 171 371 371 ALA ALA A . n A 1 172 LEU 172 372 372 LEU LEU A . n A 1 173 LEU 173 373 373 LEU LEU A . n A 1 174 GLN 174 374 374 GLN GLN A . n A 1 175 ALA 175 375 375 ALA ALA A . n A 1 176 VAL 176 376 376 VAL VAL A . n A 1 177 LEU 177 377 377 LEU LEU A . n A 1 178 LEU 178 378 378 LEU LEU A . n A 1 179 MET 179 379 379 MET MET A . n A 1 180 SER 180 380 380 SER SER A . n A 1 181 SER 181 381 381 SER SER A . n A 1 182 ASP 182 382 382 ASP ASP A . n A 1 183 ARG 183 383 383 ARG ARG A . n A 1 184 PRO 184 384 384 PRO PRO A . n A 1 185 GLY 185 385 385 GLY GLY A . n A 1 186 LEU 186 386 386 LEU LEU A . n A 1 187 ALA 187 387 387 ALA ALA A . n A 1 188 CYS 188 388 388 CYS CYS A . n A 1 189 VAL 189 389 389 VAL VAL A . n A 1 190 GLU 190 390 390 GLU GLU A . n A 1 191 ARG 191 391 391 ARG ARG A . n A 1 192 ILE 192 392 392 ILE ILE A . n A 1 193 GLU 193 393 393 GLU GLU A . n A 1 194 LYS 194 394 394 LYS ALA A . n A 1 195 TYR 195 395 395 TYR TYR A . n A 1 196 GLN 196 396 396 GLN GLN A . n A 1 197 ASP 197 397 397 ASP ASP A . n A 1 198 SER 198 398 398 SER SER A . n A 1 199 PHE 199 399 399 PHE PHE A . n A 1 200 LEU 200 400 400 LEU LEU A . n A 1 201 LEU 201 401 401 LEU LEU A . n A 1 202 ALA 202 402 402 ALA ALA A . n A 1 203 PHE 203 403 403 PHE PHE A . n A 1 204 GLU 204 404 404 GLU GLU A . n A 1 205 HIS 205 405 405 HIS HIS A . n A 1 206 TYR 206 406 406 TYR TYR A . n A 1 207 ILE 207 407 407 ILE ILE A . n A 1 208 ASN 208 408 408 ASN ASN A . n A 1 209 TYR 209 409 409 TYR TYR A . n A 1 210 ARG 210 410 410 ARG ARG A . n A 1 211 LYS 211 411 411 LYS LYS A . n A 1 212 HIS 212 412 412 HIS HIS A . n A 1 213 HIS 213 413 413 HIS HIS A . n A 1 214 VAL 214 414 414 VAL VAL A . n A 1 215 THR 215 415 415 THR THR A . n A 1 216 HIS 216 416 416 HIS HIS A . n A 1 217 PHE 217 417 417 PHE PHE A . n A 1 218 TRP 218 418 418 TRP TRP A . n A 1 219 PRO 219 419 419 PRO PRO A . n A 1 220 LYS 220 420 420 LYS LYS A . n A 1 221 LEU 221 421 421 LEU LEU A . n A 1 222 LEU 222 422 422 LEU LEU A . n A 1 223 MET 223 423 423 MET MET A . n A 1 224 LYS 224 424 424 LYS LYS A . n A 1 225 VAL 225 425 425 VAL VAL A . n A 1 226 THR 226 426 426 THR THR A . n A 1 227 ASP 227 427 427 ASP ASP A . n A 1 228 LEU 228 428 428 LEU LEU A . n A 1 229 ARG 229 429 429 ARG ARG A . n A 1 230 MET 230 430 430 MET MET A . n A 1 231 ILE 231 431 431 ILE ILE A . n A 1 232 GLY 232 432 432 GLY GLY A . n A 1 233 ALA 233 433 433 ALA ALA A . n A 1 234 CYS 234 434 434 CYS CYS A . n A 1 235 HIS 235 435 435 HIS HIS A . n A 1 236 ALA 236 436 436 ALA ALA A . n A 1 237 SER 237 437 437 SER SER A . n A 1 238 ARG 238 438 438 ARG ARG A . n A 1 239 PHE 239 439 439 PHE PHE A . n A 1 240 LEU 240 440 440 LEU LEU A . n A 1 241 HIS 241 441 441 HIS HIS A . n A 1 242 MET 242 442 442 MET MET A . n A 1 243 LYS 243 443 443 LYS LYS A . n A 1 244 VAL 244 444 444 VAL VAL A . n A 1 245 GLU 245 445 445 GLU GLU A . n A 1 246 CYS 246 446 446 CYS CYS A . n A 1 247 PRO 247 447 447 PRO PRO A . n A 1 248 THR 248 448 448 THR ALA A . n A 1 249 GLU 249 449 449 GLU ALA A . n A 1 250 LEU 250 450 450 LEU LEU A . n A 1 251 PHE 251 451 451 PHE PHE A . n A 1 252 PRO 252 452 452 PRO PRO A . n A 1 253 PRO 253 453 453 PRO PRO A . n A 1 254 LEU 254 454 454 LEU LEU A . n A 1 255 PHE 255 455 455 PHE PHE A . n A 1 256 LEU 256 456 456 LEU LEU A . n A 1 257 GLU 257 457 457 GLU ALA A . n A 1 258 VAL 258 458 458 VAL VAL A . n A 1 259 PHE 259 459 459 PHE PHE A . n A 1 260 GLU 260 460 460 GLU GLU A . n A 1 261 ASP 261 461 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-04-15 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 CNS refinement . ? 3 REFMAC refinement . ? 4 CNS phasing . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A PRO 212 ? ? ND2 A ASN 408 ? ? 2.15 2 1 O A MET 310 ? ? OG A SER 314 ? ? 2.16 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A ILE 222 ? ? O A ILE 222 ? ? 1.112 1.229 -0.117 0.019 N 2 1 CA A ASN 233 ? ? C A ASN 233 ? ? 1.683 1.525 0.158 0.026 N 3 1 CA A ARG 282 ? ? CB A ARG 282 ? ? 1.682 1.535 0.147 0.022 N 4 1 C A LYS 289 ? ? O A LYS 289 ? ? 1.352 1.229 0.123 0.019 N 5 1 CB A CYS 298 ? ? SG A CYS 298 ? ? 1.985 1.818 0.167 0.017 N 6 1 C A SER 314 ? ? O A SER 314 ? ? 1.354 1.229 0.125 0.019 N 7 1 CA A VAL 319 ? ? CB A VAL 319 ? ? 1.397 1.543 -0.146 0.021 N 8 1 CZ A TYR 321 ? ? CE2 A TYR 321 ? ? 1.272 1.381 -0.109 0.013 N 9 1 CB A VAL 370 ? ? CG1 A VAL 370 ? ? 1.393 1.524 -0.131 0.021 N 10 1 CB A ASP 382 ? ? CG A ASP 382 ? ? 1.670 1.513 0.157 0.021 N 11 1 CG A ARG 383 ? ? CD A ARG 383 ? ? 1.350 1.515 -0.165 0.025 N 12 1 CZ A TYR 406 ? ? CE2 A TYR 406 ? ? 1.275 1.381 -0.106 0.013 N 13 1 CE1 A PHE 417 ? ? CZ A PHE 417 ? ? 1.228 1.369 -0.141 0.019 N 14 1 CG A TRP 418 ? ? CD1 A TRP 418 ? ? 1.273 1.363 -0.090 0.014 N 15 1 C A CYS 434 ? ? O A CYS 434 ? ? 1.069 1.229 -0.160 0.019 N 16 1 CE1 A PHE 439 ? ? CZ A PHE 439 ? ? 1.255 1.369 -0.114 0.019 N 17 1 CD A GLU 445 ? ? OE1 A GLU 445 ? ? 1.338 1.252 0.086 0.011 N 18 1 CZ A PHE 459 ? ? CE2 A PHE 459 ? ? 1.240 1.369 -0.129 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A CYS 298 ? ? CB A CYS 298 ? ? SG A CYS 298 ? ? 127.46 114.20 13.26 1.10 N 2 1 CB A ASP 300 ? ? CG A ASP 300 ? ? OD2 A ASP 300 ? ? 125.66 118.30 7.36 0.90 N 3 1 OE1 A GLU 311 ? ? CD A GLU 311 ? ? OE2 A GLU 311 ? ? 115.98 123.30 -7.32 1.20 N 4 1 CB A ASP 367 ? ? CG A ASP 367 ? ? OD2 A ASP 367 ? ? 127.27 118.30 8.97 0.90 N 5 1 CB A ASP 382 ? ? CG A ASP 382 ? ? OD1 A ASP 382 ? ? 130.47 118.30 12.17 0.90 N 6 1 NE A ARG 391 ? ? CZ A ARG 391 ? ? NH1 A ARG 391 ? ? 124.77 120.30 4.47 0.50 N 7 1 CB A ASP 427 ? ? CG A ASP 427 ? ? OD2 A ASP 427 ? ? 126.24 118.30 7.94 0.90 N 8 1 CA A CYS 446 ? ? CB A CYS 446 ? ? SG A CYS 446 ? ? 120.90 114.20 6.70 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 202 ? ? -93.52 -68.33 2 1 THR A 232 ? ? -147.79 22.19 3 1 HIS A 237 ? ? -148.99 24.68 4 1 LEU A 266 ? ? 73.26 -32.13 5 1 HIS A 271 ? ? -42.10 -73.52 6 1 LYS A 274 ? ? -51.96 -78.25 7 1 ILE A 275 ? ? -59.56 31.93 8 1 ARG A 320 ? ? -91.37 52.02 9 1 GLU A 324 ? ? -64.92 -86.42 10 1 ASN A 331 ? ? 49.96 25.39 11 1 LYS A 342 ? ? -61.43 -78.50 12 1 ASN A 343 ? ? -51.42 -7.97 13 1 MET A 358 ? ? -56.34 -9.37 14 1 SER A 361 ? ? -65.00 26.85 15 1 VAL A 389 ? ? -69.80 -73.28 16 1 LYS A 411 ? ? 35.89 71.46 17 1 HIS A 413 ? ? -119.06 63.72 18 1 VAL A 444 ? ? -80.70 -125.36 19 1 GLU A 445 ? ? 58.96 -2.07 20 1 CYS A 446 ? ? 84.26 69.21 21 1 PRO A 447 ? ? -28.45 -126.63 22 1 THR A 448 ? ? 36.93 -169.75 23 1 GLU A 449 ? ? 39.65 -166.08 24 1 LEU A 450 ? ? 7.96 48.37 25 1 PRO A 452 ? ? -31.93 139.63 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 203 ? CG ? A GLU 3 CG 2 1 Y 1 A GLU 203 ? CD ? A GLU 3 CD 3 1 Y 1 A GLU 203 ? OE1 ? A GLU 3 OE1 4 1 Y 1 A GLU 203 ? OE2 ? A GLU 3 OE2 5 1 Y 1 A LYS 206 ? CG ? A LYS 6 CG 6 1 Y 1 A LYS 206 ? CD ? A LYS 6 CD 7 1 Y 1 A LYS 206 ? CE ? A LYS 6 CE 8 1 Y 1 A LYS 206 ? NZ ? A LYS 6 NZ 9 1 Y 1 A HIS 210 ? CG ? A HIS 10 CG 10 1 Y 1 A HIS 210 ? ND1 ? A HIS 10 ND1 11 1 Y 1 A HIS 210 ? CD2 ? A HIS 10 CD2 12 1 Y 1 A HIS 210 ? CE1 ? A HIS 10 CE1 13 1 Y 1 A HIS 210 ? NE2 ? A HIS 10 NE2 14 1 Y 1 A LYS 211 ? CG ? A LYS 11 CG 15 1 Y 1 A LYS 211 ? CD ? A LYS 11 CD 16 1 Y 1 A LYS 211 ? CE ? A LYS 11 CE 17 1 Y 1 A LYS 211 ? NZ ? A LYS 11 NZ 18 1 Y 1 A ASP 216 ? CG ? A ASP 16 CG 19 1 Y 1 A ASP 216 ? OD1 ? A ASP 16 OD1 20 1 Y 1 A ASP 216 ? OD2 ? A ASP 16 OD2 21 1 Y 1 A GLU 217 ? CG ? A GLU 17 CG 22 1 Y 1 A GLU 217 ? CD ? A GLU 17 CD 23 1 Y 1 A GLU 217 ? OE1 ? A GLU 17 OE1 24 1 Y 1 A GLU 217 ? OE2 ? A GLU 17 OE2 25 1 Y 1 A GLU 220 ? CG ? A GLU 20 CG 26 1 Y 1 A GLU 220 ? CD ? A GLU 20 CD 27 1 Y 1 A GLU 220 ? OE1 ? A GLU 20 OE1 28 1 Y 1 A GLU 220 ? OE2 ? A GLU 20 OE2 29 1 Y 1 A LYS 223 ? CG ? A LYS 23 CG 30 1 Y 1 A LYS 223 ? CD ? A LYS 23 CD 31 1 Y 1 A LYS 223 ? CE ? A LYS 23 CE 32 1 Y 1 A LYS 223 ? NZ ? A LYS 23 NZ 33 1 Y 1 A GLU 227 ? CG ? A GLU 27 CG 34 1 Y 1 A GLU 227 ? CD ? A GLU 27 CD 35 1 Y 1 A GLU 227 ? OE1 ? A GLU 27 OE1 36 1 Y 1 A GLU 227 ? OE2 ? A GLU 27 OE2 37 1 Y 1 A SER 236 ? OG ? A SER 37 OG 38 1 Y 1 A LYS 241 ? CG ? A LYS 42 CG 39 1 Y 1 A LYS 241 ? CD ? A LYS 42 CD 40 1 Y 1 A LYS 241 ? CE ? A LYS 42 CE 41 1 Y 1 A LYS 241 ? NZ ? A LYS 42 NZ 42 1 Y 1 A GLN 251 ? CG ? A GLN 52 CG 43 1 Y 1 A GLN 251 ? CD ? A GLN 52 CD 44 1 Y 1 A GLN 251 ? OE1 ? A GLN 52 OE1 45 1 Y 1 A GLN 251 ? NE2 ? A GLN 52 NE2 46 1 Y 1 A GLU 267 ? CG ? A GLU 67 CG 47 1 Y 1 A GLU 267 ? CD ? A GLU 67 CD 48 1 Y 1 A GLU 267 ? OE1 ? A GLU 67 OE1 49 1 Y 1 A GLU 267 ? OE2 ? A GLU 67 OE2 50 1 Y 1 A LYS 274 ? CG ? A LYS 74 CG 51 1 Y 1 A LYS 274 ? CD ? A LYS 74 CD 52 1 Y 1 A LYS 274 ? CE ? A LYS 74 CE 53 1 Y 1 A LYS 274 ? NZ ? A LYS 74 NZ 54 1 Y 1 A THR 281 ? OG1 ? A THR 81 OG1 55 1 Y 1 A THR 281 ? CG2 ? A THR 81 CG2 56 1 Y 1 A ARG 282 ? CG ? A ARG 82 CG 57 1 Y 1 A ARG 282 ? CD ? A ARG 82 CD 58 1 Y 1 A ARG 282 ? NE ? A ARG 82 NE 59 1 Y 1 A ARG 282 ? CZ ? A ARG 82 CZ 60 1 Y 1 A ARG 282 ? NH1 ? A ARG 82 NH1 61 1 Y 1 A ARG 282 ? NH2 ? A ARG 82 NH2 62 1 Y 1 A LYS 288 ? CG ? A LYS 88 CG 63 1 Y 1 A LYS 288 ? CD ? A LYS 88 CD 64 1 Y 1 A LYS 288 ? CE ? A LYS 88 CE 65 1 Y 1 A LYS 288 ? NZ ? A LYS 88 NZ 66 1 Y 1 A ASP 322 ? CG ? A ASP 122 CG 67 1 Y 1 A ASP 322 ? OD1 ? A ASP 122 OD1 68 1 Y 1 A ASP 322 ? OD2 ? A ASP 122 OD2 69 1 Y 1 A LYS 394 ? CG ? A LYS 194 CG 70 1 Y 1 A LYS 394 ? CD ? A LYS 194 CD 71 1 Y 1 A LYS 394 ? CE ? A LYS 194 CE 72 1 Y 1 A LYS 394 ? NZ ? A LYS 194 NZ 73 1 Y 1 A THR 448 ? OG1 ? A THR 248 OG1 74 1 Y 1 A THR 448 ? CG2 ? A THR 248 CG2 75 1 Y 1 A GLU 449 ? CG ? A GLU 249 CG 76 1 Y 1 A GLU 449 ? CD ? A GLU 249 CD 77 1 Y 1 A GLU 449 ? OE1 ? A GLU 249 OE1 78 1 Y 1 A GLU 449 ? OE2 ? A GLU 249 OE2 79 1 Y 1 A GLU 457 ? CG ? A GLU 257 CG 80 1 Y 1 A GLU 457 ? CD ? A GLU 257 CD 81 1 Y 1 A GLU 457 ? OE1 ? A GLU 257 OE1 82 1 Y 1 A GLU 457 ? OE2 ? A GLU 257 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLN 234 A A GLN 35 2 1 Y 1 A ALA 253 ? A ALA 53 3 1 Y 1 A PRO 254 ? A PRO 54 4 1 Y 1 A ILE 255 ? A ILE 55 5 1 Y 1 A VAL 256 ? A VAL 56 6 1 Y 1 A ASN 257 ? A ASN 57 7 1 Y 1 A ALA 258 ? A ALA 58 8 1 Y 1 A PRO 259 ? A PRO 59 9 1 Y 1 A GLU 260 ? A GLU 60 10 1 Y 1 A GLY 261 ? A GLY 61 11 1 Y 1 A GLY 262 ? A GLY 62 12 1 Y 1 A LYS 263 ? A LYS 63 13 1 Y 1 A VAL 264 ? A VAL 64 14 1 Y 1 A ASP 461 ? A ASP 261 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' _pdbx_entity_nonpoly.comp_id 4HY # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 4HY _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 500 _pdbx_nonpoly_scheme.auth_seq_num 500 _pdbx_nonpoly_scheme.pdb_mon_id 4HY _pdbx_nonpoly_scheme.auth_mon_id TRI _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . #