data_1NY2 # _entry.id 1NY2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1NY2 pdb_00001ny2 10.2210/pdb1ny2/pdb RCSB RCSB018337 ? ? WWPDB D_1000018337 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1HDT 'Structure of a retro-binding peptide inhibitor complexed with human-thrombin' unspecified PDB 7KME 'Crystal Structure Of Human -Thrombin Inhibited With Sel2711' unspecified PDB 8KME 'Crystal Structure Of Human -Thrombin Inhibited With Sel2770' unspecified PDB 1TMU 'Changes in interactions in complexes of hirudin derivatives and human -thrombin due to different crystal forms' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1NY2 _pdbx_database_status.recvd_initial_deposition_date 2003-02-11 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Krishnan, R.' 1 'Tulinsky, A.' 2 'Schmaier, A.H.' 3 'Hasan, A.A.' 4 'Warnock, M.' 5 'Srikanth, S.' 6 'Mahdi, F.' 7 # _citation.id primary _citation.title 'Mechanisms of Arg-Pro-Pro-Gly-Phe inhibition of thrombin.' _citation.journal_abbrev 'Am.J.Physiol.Heart Circ.Physiol.' _citation.journal_volume 285 _citation.page_first H183 _citation.page_last H193 _citation.year 2003 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 0363-6135 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12598231 _citation.pdbx_database_id_DOI 10.1152/ajpheart.00490.2002 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hasan, A.A.' 1 ? primary 'Warnock, M.' 2 ? primary 'Nieman, M.' 3 ? primary 'Srikanth, S.' 4 ? primary 'Mahdi, F.' 5 ? primary 'Krishnan, R.' 6 ? primary 'Tulinsky, A.' 7 ? primary 'Schmaier, A.H.' 8 ? # _cell.entry_id 1NY2 _cell.length_a 79.15 _cell.length_b 104.97 _cell.length_c 45.18 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 # _symmetry.entry_id 1NY2 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 18 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'thrombin light chain' 4096.534 1 3.4.21.5 ? 'light chain A' ? 2 polymer nat 'thrombin Heavy chain' 29780.219 1 3.4.21.5 ? 'heavy chain B' ? 3 polymer syn Hirugen 1363.399 1 ? ? ? ? 4 polymer syn 'Inhibitor peptide RPPGF' 573.664 1 ? ? ? ? 5 water nat water 18.015 51 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Coagulation factor II' 2 'Coagulation factor II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 1 ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 2 ? 3 'polypeptide(L)' no yes 'DFEEIPEE(TYS)L' DFEEIPEEYL 3 ? 4 'polypeptide(L)' no no RPPGF RPPGF 4 ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 PHE n 1 3 GLY n 1 4 SER n 1 5 GLY n 1 6 GLU n 1 7 ALA n 1 8 ASP n 1 9 CYS n 1 10 GLY n 1 11 LEU n 1 12 ARG n 1 13 PRO n 1 14 LEU n 1 15 PHE n 1 16 GLU n 1 17 LYS n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 GLU n 1 22 ASP n 1 23 LYS n 1 24 THR n 1 25 GLU n 1 26 ARG n 1 27 GLU n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 SER n 1 32 TYR n 1 33 ILE n 1 34 ASP n 1 35 GLY n 1 36 ARG n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 2 258 GLY n 2 259 GLU n 3 1 ASP n 3 2 PHE n 3 3 GLU n 3 4 GLU n 3 5 ILE n 3 6 PRO n 3 7 GLU n 3 8 GLU n 3 9 TYS n 3 10 LEU n 4 1 ARG n 4 2 PRO n 4 3 PRO n 4 4 GLY n 4 5 PHE n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? human 'Homo sapiens' 9606 Homo ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 'alpha thrombin catalytic domain' 2 1 sample ? ? human 'Homo sapiens' 9606 Homo ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 3 1 sample ? ? ? ? ? 'Chemically synthesized' 4 1 sample ? ? ? ? ? 'Chemically synthesized' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN P00734 1 TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 328 ? 2 UNP THRB_HUMAN P00734 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE ; 364 ? 3 UNP HIR2_HIRME P28504 3 DFEEIPEEYL 55 ? 4 PDB 1NY2 1NY2 4 RPPGF 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1NY2 1 1 H 36 ? P00734 328 ? 363 ? 1 15 2 2 1NY2 2 1 ? 259 ? P00734 364 ? 622 ? 16 247 3 3 1NY2 3 1 ? 10 ? P28504 55 ? 64 ? 55 64 4 4 1NY2 4 1 ? 5 ? 1NY2 380 ? 384 ? 380 384 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1NY2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.62 _exptl_crystal.density_percent_sol 53.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details 'PEG 4000, ammonium sulphate, sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 25K, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 1997-11-11 _diffrn_detector.details 'yale mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'yale mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1NY2 _reflns.observed_criterion_sigma_F 3.0 _reflns.observed_criterion_sigma_I 1.5 _reflns.d_resolution_high 2.1 _reflns.d_resolution_low 20 _reflns.number_all 23504 _reflns.number_obs 17158 _reflns.percent_possible_obs 73 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.3 _reflns_shell.percent_possible_all 0.50 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1NY2 _refine.ls_d_res_high 2.3 _refine.ls_d_res_low 8.0 _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16037 _refine.ls_number_reflns_R_free ? _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all 0.202 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.202 _refine.ls_R_factor_R_free ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1DIT _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2503 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 51 _refine_hist.number_atoms_total 2554 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function p_bond_d 0.020 ? ? ? 'X-RAY DIFFRACTION' ? p_angle_d 0.047 ? ? ? 'X-RAY DIFFRACTION' ? p_mcangle_it 0.057 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1NY2 _struct.title 'Human alpha thrombin inhibited by RPPGF and hirugen' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NY2 _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'thrombosis, retro binding, HYDROLASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 25 C GLU A 30 H GLU 1 14 GLU 1 14 1 ? 6 HELX_P HELX_P2 2 ALA B 41 ? CYS B 44 ? ALA 2 55 CYS 2 58 5 ? 4 HELX_P HELX_P3 3 PRO B 48 B ASP B 51 E PRO 2 60 ASP 2 60 5 ? 4 HELX_P HELX_P4 4 THR B 55 I ASN B 57 ? THR 2 60 ASN 2 62 5 ? 3 HELX_P HELX_P5 5 ASP B 122 ? LEU B 130 ? ASP 2 125 LEU 2 130 1 ? 9 HELX_P HELX_P6 6 GLU B 169 ? ASP B 175 ? GLU 2 164 ASP 2 170 1 ? 7 HELX_P HELX_P7 7 LYS B 191 ? GLY B 195 C LYS 2 185 GLY 2 186 5 ? 5 HELX_P HELX_P8 8 LEU B 246 ? GLY B 258 ? LEU 2 234 GLY 2 246 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 B CYS 119 SG ? ? 1 CYS 1 2 CYS 122 1_555 ? ? ? ? ? ? ? 2.087 ? ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? 2 CYS 42 2 CYS 58 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? 2 CYS 168 2 CYS 182 1_555 ? ? ? ? ? ? ? 2.136 ? ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? 2 CYS 191 2 CYS 220 1_555 ? ? ? ? ? ? ? 2.067 ? ? covale1 covale both ? C GLU 8 C ? ? ? 1_555 C TYS 9 N ? ? 3 GLU 62 3 TYS 63 1_555 ? ? ? ? ? ? ? 1.308 ? ? covale2 covale both ? C TYS 9 C ? ? ? 1_555 C LEU 10 N ? ? 3 TYS 63 3 LEU 64 1_555 ? ? ? ? ? ? ? 1.331 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id 2 _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 2 _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -5.14 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 5 ? ASP B 6 ? SER 2 20 ASP 2 21 A 2 GLN B 161 ? PRO B 166 ? GLN 2 156 PRO 2 161 A 3 LYS B 135 ? GLY B 140 ? LYS 2 135 GLY 2 140 A 4 PRO B 208 ? LYS B 212 ? PRO 2 198 LYS 2 202 A 5 TRP B 219 ? TRP B 227 ? TRP 2 207 TRP 2 215 A 6 GLY B 238 ? THR B 241 ? GLY 2 226 THR 2 229 A 7 MET B 185 ? ALA B 188 ? MET 2 180 ALA 2 183 B 1 GLN B 15 ? ARG B 20 ? GLN 2 30 ARG 2 35 B 2 GLU B 25 ? LEU B 32 ? GLU 2 39 LEU 2 46 B 3 TRP B 37 ? THR B 40 ? TRP 2 51 THR 2 54 B 4 ALA B 101 ? LEU B 105 ? ALA 2 104 LEU 2 108 B 5 LYS B 77 ? ILE B 86 ? LYS 2 81 ILE 2 90 B 6 LEU B 59 ? ILE B 63 ? LEU 2 64 ILE 2 68 B 7 GLN B 15 ? ARG B 20 ? GLN 2 30 ARG 2 35 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER B 5 ? N SER 2 20 O VAL B 162 ? O VAL 2 157 A 2 3 O VAL B 163 ? O VAL 2 158 N VAL B 138 ? N VAL 2 138 A 3 4 N ARG B 137 ? N ARG 2 137 O VAL B 210 ? O VAL 2 200 A 4 5 N PHE B 209 ? N PHE 2 199 O MET B 222 ? O MET 2 210 A 5 6 N TRP B 227 ? N TRP 2 215 O PHE B 239 ? O PHE 2 227 A 6 7 O TYR B 240 ? O TYR 2 228 N PHE B 186 ? N PHE 2 181 B 1 2 N ARG B 20 ? N ARG 2 35 O GLU B 25 ? O GLU 2 39 B 2 3 N SER B 31 ? N SER 2 45 O LEU B 39 ? O LEU 2 53 B 3 4 N THR B 40 ? N THR 2 54 O ALA B 101 ? O ALA 2 104 B 4 5 O LEU B 102 ? O LEU 2 105 N TYR B 85 ? N TYR 2 89 B 5 6 O SER B 79 ? O SER 2 83 N VAL B 61 ? N VAL 2 66 B 6 7 O ARG B 62 ? O ARG 2 67 N MET B 17 ? N MET 2 32 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR CHAIN 3 OF HIRUGEN' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 PHE B 19 ? PHE 2 34 . ? 1_555 ? 2 AC1 14 LYS B 21 ? LYS 2 36 . ? 1_555 ? 3 AC1 14 LEU B 60 ? LEU 2 65 . ? 1_555 ? 4 AC1 14 ARG B 62 ? ARG 2 67 . ? 1_555 ? 5 AC1 14 ARG B 68 ? ARG 2 73 . ? 1_555 ? 6 AC1 14 THR B 69 ? THR 2 74 . ? 1_555 ? 7 AC1 14 TYR B 71 ? TYR 2 76 . ? 1_555 ? 8 AC1 14 ILE B 78 ? ILE 2 82 . ? 1_555 ? 9 AC1 14 GLU B 94 A GLU 2 97 . ? 4_555 ? 10 AC1 14 ASN B 95 ? ASN 2 98 . ? 4_555 ? 11 AC1 14 ASP B 97 ? ASP 2 100 . ? 4_555 ? 12 AC1 14 ARG B 180 ? ARG 2 175 . ? 4_555 ? 13 AC1 14 HOH G . ? HOH 3 423 . ? 1_555 ? 14 AC1 14 HOH G . ? HOH 3 429 . ? 1_555 ? # _database_PDB_matrix.entry_id 1NY2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1NY2 _atom_sites.fract_transf_matrix[1][1] 0.012634 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009527 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022134 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR 1 H n A 1 2 PHE 2 1 1 PHE PHE 1 G n A 1 3 GLY 3 1 1 GLY GLY 1 F n A 1 4 SER 4 1 1 SER SER 1 E n A 1 5 GLY 5 1 1 GLY GLY 1 D n A 1 6 GLU 6 1 1 GLU GLU 1 C n A 1 7 ALA 7 1 1 ALA ALA 1 B n A 1 8 ASP 8 1 1 ASP ASP 1 A n A 1 9 CYS 9 1 1 CYS CYS 1 . n A 1 10 GLY 10 2 2 GLY GLY 1 . n A 1 11 LEU 11 3 3 LEU LEU 1 . n A 1 12 ARG 12 4 4 ARG ARG 1 . n A 1 13 PRO 13 5 5 PRO PRO 1 . n A 1 14 LEU 14 6 6 LEU LEU 1 . n A 1 15 PHE 15 7 7 PHE PHE 1 . n A 1 16 GLU 16 8 8 GLU GLU 1 . n A 1 17 LYS 17 9 9 LYS LYS 1 . n A 1 18 LYS 18 10 10 LYS LYS 1 . n A 1 19 SER 19 11 11 SER SER 1 . n A 1 20 LEU 20 12 12 LEU LEU 1 . n A 1 21 GLU 21 13 13 GLU GLU 1 . n A 1 22 ASP 22 14 14 ASP ASP 1 . n A 1 23 LYS 23 14 14 LYS LYS 1 A n A 1 24 THR 24 14 14 THR THR 1 B n A 1 25 GLU 25 14 14 GLU GLU 1 C n A 1 26 ARG 26 14 14 ARG ARG 1 D n A 1 27 GLU 27 14 14 GLU GLU 1 E n A 1 28 LEU 28 14 14 LEU LEU 1 F n A 1 29 LEU 29 14 14 LEU LEU 1 G n A 1 30 GLU 30 14 14 GLU GLU 1 H n A 1 31 SER 31 14 14 SER SER 1 I n A 1 32 TYR 32 14 14 TYR TYR 1 J n A 1 33 ILE 33 14 14 ILE ILE 1 K n A 1 34 ASP 34 14 14 ASP ASP 1 L n A 1 35 GLY 35 14 14 GLY GLY 1 M n A 1 36 ARG 36 15 15 ARG ARG 1 . n B 2 1 ILE 1 16 16 ILE ILE 2 . n B 2 2 VAL 2 17 17 VAL VAL 2 . n B 2 3 GLU 3 18 18 GLU GLU 2 . n B 2 4 GLY 4 19 19 GLY GLY 2 . n B 2 5 SER 5 20 20 SER SER 2 . n B 2 6 ASP 6 21 21 ASP ASP 2 . n B 2 7 ALA 7 22 22 ALA ALA 2 . n B 2 8 GLU 8 23 23 GLU GLU 2 . n B 2 9 ILE 9 24 24 ILE ILE 2 . n B 2 10 GLY 10 25 25 GLY GLY 2 . n B 2 11 MET 11 26 26 MET MET 2 . n B 2 12 SER 12 27 27 SER SER 2 . n B 2 13 PRO 13 28 28 PRO PRO 2 . n B 2 14 TRP 14 29 29 TRP TRP 2 . n B 2 15 GLN 15 30 30 GLN GLN 2 . n B 2 16 VAL 16 31 31 VAL VAL 2 . n B 2 17 MET 17 32 32 MET MET 2 . n B 2 18 LEU 18 33 33 LEU LEU 2 . n B 2 19 PHE 19 34 34 PHE PHE 2 . n B 2 20 ARG 20 35 35 ARG ARG 2 . n B 2 21 LYS 21 36 36 LYS LYS 2 . n B 2 22 SER 22 36 36 SER SER 2 A n B 2 23 PRO 23 37 37 PRO PRO 2 . n B 2 24 GLN 24 38 38 GLN GLN 2 . n B 2 25 GLU 25 39 39 GLU GLU 2 . n B 2 26 LEU 26 40 40 LEU LEU 2 . n B 2 27 LEU 27 41 41 LEU LEU 2 . n B 2 28 CYS 28 42 42 CYS CYS 2 . n B 2 29 GLY 29 43 43 GLY GLY 2 . n B 2 30 ALA 30 44 44 ALA ALA 2 . n B 2 31 SER 31 45 45 SER SER 2 . n B 2 32 LEU 32 46 46 LEU LEU 2 . n B 2 33 ILE 33 47 47 ILE ILE 2 . n B 2 34 SER 34 48 48 SER SER 2 . n B 2 35 ASP 35 49 49 ASP ASP 2 . n B 2 36 ARG 36 50 50 ARG ARG 2 . n B 2 37 TRP 37 51 51 TRP TRP 2 . n B 2 38 VAL 38 52 52 VAL VAL 2 . n B 2 39 LEU 39 53 53 LEU LEU 2 . n B 2 40 THR 40 54 54 THR THR 2 . n B 2 41 ALA 41 55 55 ALA ALA 2 . n B 2 42 ALA 42 56 56 ALA ALA 2 . n B 2 43 HIS 43 57 57 HIS HIS 2 . n B 2 44 CYS 44 58 58 CYS CYS 2 . n B 2 45 LEU 45 59 59 LEU LEU 2 . n B 2 46 LEU 46 60 60 LEU LEU 2 . n B 2 47 TYR 47 60 60 TYR TYR 2 A n B 2 48 PRO 48 60 60 PRO PRO 2 B n B 2 49 PRO 49 60 60 PRO PRO 2 C n B 2 50 TRP 50 60 60 TRP TRP 2 D n B 2 51 ASP 51 60 60 ASP ASP 2 E n B 2 52 LYS 52 60 60 LYS LYS 2 F n B 2 53 ASN 53 60 60 ASN ASN 2 G n B 2 54 PHE 54 60 60 PHE PHE 2 H n B 2 55 THR 55 60 60 THR THR 2 I n B 2 56 GLU 56 61 61 GLU GLU 2 . n B 2 57 ASN 57 62 62 ASN ASN 2 . n B 2 58 ASP 58 63 63 ASP ASP 2 . n B 2 59 LEU 59 64 64 LEU LEU 2 . n B 2 60 LEU 60 65 65 LEU LEU 2 . n B 2 61 VAL 61 66 66 VAL VAL 2 . n B 2 62 ARG 62 67 67 ARG ARG 2 . n B 2 63 ILE 63 68 68 ILE ILE 2 . n B 2 64 GLY 64 69 69 GLY GLY 2 . n B 2 65 LYS 65 70 70 LYS LYS 2 . n B 2 66 HIS 66 71 71 HIS HIS 2 . n B 2 67 SER 67 72 72 SER SER 2 . n B 2 68 ARG 68 73 73 ARG ARG 2 . n B 2 69 THR 69 74 74 THR THR 2 . n B 2 70 ARG 70 75 75 ARG ARG 2 . n B 2 71 TYR 71 76 76 TYR TYR 2 . n B 2 72 GLU 72 77 77 GLU GLU 2 . n B 2 73 ARG 73 77 77 ARG ARG 2 A n B 2 74 ASN 74 78 78 ASN ASN 2 . n B 2 75 ILE 75 79 79 ILE ILE 2 . n B 2 76 GLU 76 80 80 GLU GLU 2 . n B 2 77 LYS 77 81 81 LYS LYS 2 . n B 2 78 ILE 78 82 82 ILE ILE 2 . n B 2 79 SER 79 83 83 SER SER 2 . n B 2 80 MET 80 84 84 MET MET 2 . n B 2 81 LEU 81 85 85 LEU LEU 2 . n B 2 82 GLU 82 86 86 GLU GLU 2 . n B 2 83 LYS 83 87 87 LYS LYS 2 . n B 2 84 ILE 84 88 88 ILE ILE 2 . n B 2 85 TYR 85 89 89 TYR TYR 2 . n B 2 86 ILE 86 90 90 ILE ILE 2 . n B 2 87 HIS 87 91 91 HIS HIS 2 . n B 2 88 PRO 88 92 92 PRO PRO 2 . n B 2 89 ARG 89 93 93 ARG ARG 2 . n B 2 90 TYR 90 94 94 TYR TYR 2 . n B 2 91 ASN 91 95 95 ASN ASN 2 . n B 2 92 TRP 92 96 96 TRP TRP 2 . n B 2 93 ARG 93 97 97 ARG ARG 2 . n B 2 94 GLU 94 97 97 GLU GLU 2 A n B 2 95 ASN 95 98 98 ASN ASN 2 . n B 2 96 LEU 96 99 99 LEU LEU 2 . n B 2 97 ASP 97 100 100 ASP ASP 2 . n B 2 98 ARG 98 101 101 ARG ARG 2 . n B 2 99 ASP 99 102 102 ASP ASP 2 . n B 2 100 ILE 100 103 103 ILE ILE 2 . n B 2 101 ALA 101 104 104 ALA ALA 2 . n B 2 102 LEU 102 105 105 LEU LEU 2 . n B 2 103 MET 103 106 106 MET MET 2 . n B 2 104 LYS 104 107 107 LYS LYS 2 . n B 2 105 LEU 105 108 108 LEU LEU 2 . n B 2 106 LYS 106 109 109 LYS LYS 2 . n B 2 107 LYS 107 110 110 LYS LYS 2 . n B 2 108 PRO 108 111 111 PRO PRO 2 . n B 2 109 VAL 109 112 112 VAL VAL 2 . n B 2 110 ALA 110 113 113 ALA ALA 2 . n B 2 111 PHE 111 114 114 PHE PHE 2 . n B 2 112 SER 112 115 115 SER SER 2 . n B 2 113 ASP 113 116 116 ASP ASP 2 . n B 2 114 TYR 114 117 117 TYR TYR 2 . n B 2 115 ILE 115 118 118 ILE ILE 2 . n B 2 116 HIS 116 119 119 HIS HIS 2 . n B 2 117 PRO 117 120 120 PRO PRO 2 . n B 2 118 VAL 118 121 121 VAL VAL 2 . n B 2 119 CYS 119 122 122 CYS CYS 2 . n B 2 120 LEU 120 123 123 LEU LEU 2 . n B 2 121 PRO 121 124 124 PRO PRO 2 . n B 2 122 ASP 122 125 125 ASP ASP 2 . n B 2 123 ARG 123 126 126 ARG ARG 2 . n B 2 124 GLU 124 127 127 GLU GLU 2 . n B 2 125 THR 125 128 128 THR THR 2 . n B 2 126 ALA 126 129 129 ALA ALA 2 . n B 2 127 ALA 127 129 129 ALA ALA 2 A n B 2 128 SER 128 129 129 SER SER 2 B n B 2 129 LEU 129 129 129 LEU LEU 2 C n B 2 130 LEU 130 130 130 LEU LEU 2 . n B 2 131 GLN 131 131 131 GLN GLN 2 . n B 2 132 ALA 132 132 132 ALA ALA 2 . n B 2 133 GLY 133 133 133 GLY GLY 2 . n B 2 134 TYR 134 134 134 TYR TYR 2 . n B 2 135 LYS 135 135 135 LYS LYS 2 . n B 2 136 GLY 136 136 136 GLY GLY 2 . n B 2 137 ARG 137 137 137 ARG ARG 2 . n B 2 138 VAL 138 138 138 VAL VAL 2 . n B 2 139 THR 139 139 139 THR THR 2 . n B 2 140 GLY 140 140 140 GLY GLY 2 . n B 2 141 TRP 141 141 141 TRP TRP 2 . n B 2 142 GLY 142 142 142 GLY GLY 2 . n B 2 143 ASN 143 143 143 ASN ASN 2 . n B 2 144 LEU 144 144 144 LEU LEU 2 . n B 2 145 LYS 145 145 145 LYS LYS 2 . n B 2 146 GLU 146 146 146 GLU GLU 2 . n B 2 147 THR 147 147 147 THR THR 2 . n B 2 148 TRP 148 148 148 TRP TRP 2 . n B 2 149 THR 149 149 149 THR THR 2 . n B 2 150 ALA 150 149 149 ALA ALA 2 A n B 2 151 ASN 151 149 149 ASN ASN 2 B n B 2 152 VAL 152 149 149 VAL VAL 2 C n B 2 153 GLY 153 149 149 GLY GLY 2 D n B 2 154 LYS 154 149 149 LYS LYS 2 E n B 2 155 GLY 155 150 150 GLY GLY 2 . n B 2 156 GLN 156 151 151 GLN GLN 2 . n B 2 157 PRO 157 152 152 PRO PRO 2 . n B 2 158 SER 158 153 153 SER SER 2 . n B 2 159 VAL 159 154 154 VAL VAL 2 . n B 2 160 LEU 160 155 155 LEU LEU 2 . n B 2 161 GLN 161 156 156 GLN GLN 2 . n B 2 162 VAL 162 157 157 VAL VAL 2 . n B 2 163 VAL 163 158 158 VAL VAL 2 . n B 2 164 ASN 164 159 159 ASN ASN 2 . n B 2 165 LEU 165 160 160 LEU LEU 2 . n B 2 166 PRO 166 161 161 PRO PRO 2 . n B 2 167 ILE 167 162 162 ILE ILE 2 . n B 2 168 VAL 168 163 163 VAL VAL 2 . n B 2 169 GLU 169 164 164 GLU GLU 2 . n B 2 170 ARG 170 165 165 ARG ARG 2 . n B 2 171 PRO 171 166 166 PRO PRO 2 . n B 2 172 VAL 172 167 167 VAL VAL 2 . n B 2 173 CYS 173 168 168 CYS CYS 2 . n B 2 174 LYS 174 169 169 LYS LYS 2 . n B 2 175 ASP 175 170 170 ASP ASP 2 . n B 2 176 SER 176 171 171 SER SER 2 . n B 2 177 THR 177 172 172 THR THR 2 . n B 2 178 ARG 178 173 173 ARG ARG 2 . n B 2 179 ILE 179 174 174 ILE ILE 2 . n B 2 180 ARG 180 175 175 ARG ARG 2 . n B 2 181 ILE 181 176 176 ILE ILE 2 . n B 2 182 THR 182 177 177 THR THR 2 . n B 2 183 ASP 183 178 178 ASP ASP 2 . n B 2 184 ASN 184 179 179 ASN ASN 2 . n B 2 185 MET 185 180 180 MET MET 2 . n B 2 186 PHE 186 181 181 PHE PHE 2 . n B 2 187 CYS 187 182 182 CYS CYS 2 . n B 2 188 ALA 188 183 183 ALA ALA 2 . n B 2 189 GLY 189 184 184 GLY GLY 2 . n B 2 190 TYR 190 184 184 TYR TYR 2 A n B 2 191 LYS 191 185 185 LYS LYS 2 . n B 2 192 PRO 192 186 186 PRO PRO 2 . n B 2 193 ASP 193 186 186 ASP ASP 2 A n B 2 194 GLU 194 186 186 GLU GLU 2 B n B 2 195 GLY 195 186 186 GLY GLY 2 C n B 2 196 LYS 196 186 186 LYS LYS 2 D n B 2 197 ARG 197 187 187 ARG ARG 2 . n B 2 198 GLY 198 188 188 GLY GLY 2 . n B 2 199 ASP 199 189 189 ASP ASP 2 . n B 2 200 ALA 200 190 190 ALA ALA 2 . n B 2 201 CYS 201 191 191 CYS CYS 2 . n B 2 202 GLU 202 192 192 GLU GLU 2 . n B 2 203 GLY 203 193 193 GLY GLY 2 . n B 2 204 ASP 204 194 194 ASP ASP 2 . n B 2 205 SER 205 195 195 SER SER 2 . n B 2 206 GLY 206 196 196 GLY GLY 2 . n B 2 207 GLY 207 197 197 GLY GLY 2 . n B 2 208 PRO 208 198 198 PRO PRO 2 . n B 2 209 PHE 209 199 199 PHE PHE 2 . n B 2 210 VAL 210 200 200 VAL VAL 2 . n B 2 211 MET 211 201 201 MET MET 2 . n B 2 212 LYS 212 202 202 LYS LYS 2 . n B 2 213 SER 213 203 203 SER SER 2 . n B 2 214 PRO 214 204 204 PRO PRO 2 . n B 2 215 PHE 215 204 204 PHE PHE 2 A n B 2 216 ASN 216 204 204 ASN ASN 2 B n B 2 217 ASN 217 205 205 ASN ASN 2 . n B 2 218 ARG 218 206 206 ARG ARG 2 . n B 2 219 TRP 219 207 207 TRP TRP 2 . n B 2 220 TYR 220 208 208 TYR TYR 2 . n B 2 221 GLN 221 209 209 GLN GLN 2 . n B 2 222 MET 222 210 210 MET MET 2 . n B 2 223 GLY 223 211 211 GLY GLY 2 . n B 2 224 ILE 224 212 212 ILE ILE 2 . n B 2 225 VAL 225 213 213 VAL VAL 2 . n B 2 226 SER 226 214 214 SER SER 2 . n B 2 227 TRP 227 215 215 TRP TRP 2 . n B 2 228 GLY 228 216 216 GLY GLY 2 . n B 2 229 GLU 229 217 217 GLU GLU 2 . n B 2 230 GLY 230 219 219 GLY GLY 2 . n B 2 231 CYS 231 220 220 CYS CYS 2 . n B 2 232 ASP 232 221 221 ASP ASP 2 . n B 2 233 ARG 233 221 221 ARG ARG 2 A n B 2 234 ASP 234 222 222 ASP ASP 2 . n B 2 235 GLY 235 223 223 GLY GLY 2 . n B 2 236 LYS 236 224 224 LYS LYS 2 . n B 2 237 TYR 237 225 225 TYR TYR 2 . n B 2 238 GLY 238 226 226 GLY GLY 2 . n B 2 239 PHE 239 227 227 PHE PHE 2 . n B 2 240 TYR 240 228 228 TYR TYR 2 . n B 2 241 THR 241 229 229 THR THR 2 . n B 2 242 HIS 242 230 230 HIS HIS 2 . n B 2 243 VAL 243 231 231 VAL VAL 2 . n B 2 244 PHE 244 232 232 PHE PHE 2 . n B 2 245 ARG 245 233 233 ARG ARG 2 . n B 2 246 LEU 246 234 234 LEU LEU 2 . n B 2 247 LYS 247 235 235 LYS LYS 2 . n B 2 248 LYS 248 236 236 LYS LYS 2 . n B 2 249 TRP 249 237 237 TRP TRP 2 . n B 2 250 ILE 250 238 238 ILE ILE 2 . n B 2 251 GLN 251 239 239 GLN GLN 2 . n B 2 252 LYS 252 240 240 LYS LYS 2 . n B 2 253 VAL 253 241 241 VAL VAL 2 . n B 2 254 ILE 254 242 242 ILE ILE 2 . n B 2 255 ASP 255 243 243 ASP ASP 2 . n B 2 256 GLN 256 244 244 GLN GLN 2 . n B 2 257 PHE 257 245 245 PHE PHE 2 . n B 2 258 GLY 258 246 246 GLY GLY 2 . n B 2 259 GLU 259 247 247 GLU GLU 2 . n C 3 1 ASP 1 55 55 ASP ASP 3 . n C 3 2 PHE 2 56 56 PHE PHE 3 . n C 3 3 GLU 3 57 57 GLU GLU 3 . n C 3 4 GLU 4 58 58 GLU GLU 3 . n C 3 5 ILE 5 59 59 ILE ILE 3 . n C 3 6 PRO 6 60 60 PRO PRO 3 . n C 3 7 GLU 7 61 61 GLU GLU 3 . n C 3 8 GLU 8 62 62 GLU GLU 3 . n C 3 9 TYS 9 63 63 TYS TYS 3 . n C 3 10 LEU 10 64 64 LEU LEU 3 . n D 4 1 ARG 1 380 380 ARG ARG 4 . n D 4 2 PRO 2 381 381 PRO PRO 4 . n D 4 3 PRO 3 382 382 PRO PRO 4 . n D 4 4 GLY 4 383 383 GLY GLY 4 . n D 4 5 PHE 5 384 ? ? ? 4 . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 HOH 1 419 419 HOH HOH 1 . E 5 HOH 2 421 421 HOH HOH 1 . E 5 HOH 3 462 462 HOH HOH 1 . F 5 HOH 1 400 400 HOH HOH 2 . F 5 HOH 2 402 402 HOH HOH 2 . F 5 HOH 3 403 403 HOH HOH 2 . F 5 HOH 4 404 404 HOH HOH 2 . F 5 HOH 5 405 405 HOH HOH 2 . F 5 HOH 6 406 406 HOH HOH 2 . F 5 HOH 7 408 408 HOH HOH 2 . F 5 HOH 8 410 410 HOH HOH 2 . F 5 HOH 9 412 412 HOH HOH 2 . F 5 HOH 10 414 414 HOH HOH 2 . F 5 HOH 11 416 416 HOH HOH 2 . F 5 HOH 12 417 417 HOH HOH 2 . F 5 HOH 13 418 418 HOH HOH 2 . F 5 HOH 14 420 420 HOH HOH 2 . F 5 HOH 15 422 422 HOH HOH 2 . F 5 HOH 16 424 424 HOH HOH 2 . F 5 HOH 17 425 425 HOH HOH 2 . F 5 HOH 18 426 426 HOH HOH 2 . F 5 HOH 19 427 427 HOH HOH 2 . F 5 HOH 20 428 428 HOH HOH 2 . F 5 HOH 21 430 430 HOH HOH 2 . F 5 HOH 22 431 431 HOH HOH 2 . F 5 HOH 23 434 434 HOH HOH 2 . F 5 HOH 24 435 435 HOH HOH 2 . F 5 HOH 25 436 436 HOH HOH 2 . F 5 HOH 26 440 440 HOH HOH 2 . F 5 HOH 27 441 441 HOH HOH 2 . F 5 HOH 28 444 444 HOH HOH 2 . F 5 HOH 29 445 445 HOH HOH 2 . F 5 HOH 30 447 447 HOH HOH 2 . F 5 HOH 31 448 448 HOH HOH 2 . F 5 HOH 32 449 449 HOH HOH 2 . F 5 HOH 33 451 451 HOH HOH 2 . F 5 HOH 34 452 452 HOH HOH 2 . F 5 HOH 35 453 453 HOH HOH 2 . F 5 HOH 36 454 454 HOH HOH 2 . F 5 HOH 37 456 456 HOH HOH 2 . F 5 HOH 38 458 458 HOH HOH 2 . F 5 HOH 39 459 459 HOH HOH 2 . F 5 HOH 40 460 460 HOH HOH 2 . F 5 HOH 41 461 461 HOH HOH 2 . F 5 HOH 42 463 463 HOH HOH 2 . F 5 HOH 43 464 464 HOH HOH 2 . F 5 HOH 44 465 465 HOH HOH 2 . G 5 HOH 1 407 407 HOH HOH 3 . G 5 HOH 2 423 423 HOH HOH 3 . G 5 HOH 3 429 429 HOH HOH 3 . G 5 HOH 4 455 455 HOH HOH 3 . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id TYS _pdbx_struct_mod_residue.label_seq_id 9 _pdbx_struct_mod_residue.auth_asym_id 3 _pdbx_struct_mod_residue.auth_comp_id TYS _pdbx_struct_mod_residue.auth_seq_id 63 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details O-SULFO-L-TYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-03-04 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2015-03-25 5 'Structure model' 1 4 2017-10-11 6 'Structure model' 1 5 2023-08-16 7 'Structure model' 1 6 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' 'Database references' 9 5 'Structure model' 'Refinement description' 10 6 'Structure model' 'Data collection' 11 6 'Structure model' 'Database references' 12 6 'Structure model' 'Derived calculations' 13 6 'Structure model' 'Refinement description' 14 7 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' software 2 6 'Structure model' chem_comp_atom 3 6 'Structure model' chem_comp_bond 4 6 'Structure model' database_2 5 6 'Structure model' pdbx_initial_refinement_model 6 6 'Structure model' struct_conn 7 7 'Structure model' chem_comp_atom 8 7 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 6 'Structure model' '_database_2.pdbx_DOI' 2 6 'Structure model' '_database_2.pdbx_database_accession' 3 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 7 'Structure model' '_chem_comp_atom.atom_id' 5 7 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 PROLSQ refinement . ? 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OG 2 SER 195 ? ? N 4 ARG 380 ? ? 2.08 2 1 O 1 PHE 1 G ? N 1 GLY 1 D ? 2.10 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 NE _pdbx_validate_rmsd_bond.auth_asym_id_1 2 _pdbx_validate_rmsd_bond.auth_comp_id_1 ARG _pdbx_validate_rmsd_bond.auth_seq_id_1 75 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CZ _pdbx_validate_rmsd_bond.auth_asym_id_2 2 _pdbx_validate_rmsd_bond.auth_comp_id_2 ARG _pdbx_validate_rmsd_bond.auth_seq_id_2 75 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.406 _pdbx_validate_rmsd_bond.bond_target_value 1.326 _pdbx_validate_rmsd_bond.bond_deviation 0.080 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.013 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N 1 GLY 1 F ? CA 1 GLY 1 F ? C 1 GLY 1 F ? 97.08 113.10 -16.02 2.50 N 2 1 O 1 GLY 1 F ? C 1 GLY 1 F ? N 1 SER 1 E ? 133.25 122.70 10.55 1.60 Y 3 1 CA 1 GLU 1 C ? CB 1 GLU 1 C ? CG 1 GLU 1 C ? 133.46 113.40 20.06 2.20 N 4 1 CB 1 ASP 1 A ? CG 1 ASP 1 A ? OD2 1 ASP 1 A ? 111.65 118.30 -6.65 0.90 N 5 1 CA 1 CYS 1 ? ? CB 1 CYS 1 ? ? SG 1 CYS 1 ? ? 120.80 114.20 6.60 1.10 N 6 1 O 1 LEU 3 ? ? C 1 LEU 3 ? ? N 1 ARG 4 ? ? 133.42 122.70 10.72 1.60 Y 7 1 NE 1 ARG 4 ? ? CZ 1 ARG 4 ? ? NH1 1 ARG 4 ? ? 123.98 120.30 3.68 0.50 N 8 1 N 1 SER 11 ? ? CA 1 SER 11 ? ? CB 1 SER 11 ? ? 119.93 110.50 9.43 1.50 N 9 1 CA 1 GLU 13 ? ? CB 1 GLU 13 ? ? CG 1 GLU 13 ? ? 129.23 113.40 15.83 2.20 N 10 1 NE 1 ARG 14 D ? CZ 1 ARG 14 D ? NH2 1 ARG 14 D ? 115.11 120.30 -5.19 0.50 N 11 1 CA 1 GLU 14 E ? CB 1 GLU 14 E ? CG 1 GLU 14 E ? 127.42 113.40 14.02 2.20 N 12 1 NE 1 ARG 15 ? ? CZ 1 ARG 15 ? ? NH1 1 ARG 15 ? ? 125.62 120.30 5.32 0.50 N 13 1 CB 2 ASP 21 ? ? CG 2 ASP 21 ? ? OD2 2 ASP 21 ? ? 110.64 118.30 -7.66 0.90 N 14 1 N 2 GLN 30 ? ? CA 2 GLN 30 ? ? CB 2 GLN 30 ? ? 121.65 110.60 11.05 1.80 N 15 1 CA 2 LEU 33 ? ? CB 2 LEU 33 ? ? CG 2 LEU 33 ? ? 130.80 115.30 15.50 2.30 N 16 1 CD 2 ARG 35 ? ? NE 2 ARG 35 ? ? CZ 2 ARG 35 ? ? 113.06 123.60 -10.54 1.40 N 17 1 NH1 2 ARG 35 ? ? CZ 2 ARG 35 ? ? NH2 2 ARG 35 ? ? 128.58 119.40 9.18 1.10 N 18 1 NE 2 ARG 35 ? ? CZ 2 ARG 35 ? ? NH1 2 ARG 35 ? ? 114.63 120.30 -5.67 0.50 N 19 1 NE 2 ARG 35 ? ? CZ 2 ARG 35 ? ? NH2 2 ARG 35 ? ? 116.63 120.30 -3.67 0.50 N 20 1 CB 2 LEU 41 ? ? CA 2 LEU 41 ? ? C 2 LEU 41 ? ? 123.48 110.20 13.28 1.90 N 21 1 CB 2 ASP 49 ? ? CG 2 ASP 49 ? ? OD1 2 ASP 49 ? ? 130.38 118.30 12.08 0.90 N 22 1 NE 2 ARG 50 ? ? CZ 2 ARG 50 ? ? NH1 2 ARG 50 ? ? 123.91 120.30 3.61 0.50 N 23 1 NE 2 ARG 50 ? ? CZ 2 ARG 50 ? ? NH2 2 ARG 50 ? ? 115.61 120.30 -4.69 0.50 N 24 1 CB 2 TYR 60 A ? CG 2 TYR 60 A ? CD1 2 TYR 60 A ? 116.15 121.00 -4.85 0.60 N 25 1 O 2 TRP 60 D ? C 2 TRP 60 D ? N 2 ASP 60 E ? 133.75 122.70 11.05 1.60 Y 26 1 CB 2 ASP 60 E ? CG 2 ASP 60 E ? OD2 2 ASP 60 E ? 112.31 118.30 -5.99 0.90 N 27 1 N 2 LEU 65 ? ? CA 2 LEU 65 ? ? CB 2 LEU 65 ? ? 123.47 110.40 13.07 2.00 N 28 1 CA 2 LEU 65 ? ? CB 2 LEU 65 ? ? CG 2 LEU 65 ? ? 135.81 115.30 20.51 2.30 N 29 1 CD 2 ARG 73 ? ? NE 2 ARG 73 ? ? CZ 2 ARG 73 ? ? 106.39 123.60 -17.21 1.40 N 30 1 NE 2 ARG 73 ? ? CZ 2 ARG 73 ? ? NH1 2 ARG 73 ? ? 108.39 120.30 -11.91 0.50 N 31 1 NE 2 ARG 73 ? ? CZ 2 ARG 73 ? ? NH2 2 ARG 73 ? ? 126.26 120.30 5.96 0.50 N 32 1 CG 2 ARG 75 ? ? CD 2 ARG 75 ? ? NE 2 ARG 75 ? ? 150.85 111.80 39.05 2.10 N 33 1 CD 2 ARG 75 ? ? NE 2 ARG 75 ? ? CZ 2 ARG 75 ? ? 166.54 123.60 42.94 1.40 N 34 1 NE 2 ARG 75 ? ? CZ 2 ARG 75 ? ? NH1 2 ARG 75 ? ? 124.84 120.30 4.54 0.50 N 35 1 NE 2 ARG 75 ? ? CZ 2 ARG 75 ? ? NH2 2 ARG 75 ? ? 112.23 120.30 -8.07 0.50 N 36 1 CB 2 TYR 76 ? ? CG 2 TYR 76 ? ? CD1 2 TYR 76 ? ? 115.88 121.00 -5.12 0.60 N 37 1 CB 2 GLU 77 ? ? CG 2 GLU 77 ? ? CD 2 GLU 77 ? ? 131.59 114.20 17.39 2.70 N 38 1 CD 2 ARG 77 A ? NE 2 ARG 77 A ? CZ 2 ARG 77 A ? 143.80 123.60 20.20 1.40 N 39 1 NE 2 ARG 77 A ? CZ 2 ARG 77 A ? NH2 2 ARG 77 A ? 125.43 120.30 5.13 0.50 N 40 1 CA 2 HIS 91 ? ? CB 2 HIS 91 ? ? CG 2 HIS 91 ? ? 103.19 113.60 -10.41 1.70 N 41 1 CD 2 ARG 93 ? ? NE 2 ARG 93 ? ? CZ 2 ARG 93 ? ? 134.60 123.60 11.00 1.40 N 42 1 CB 2 TYR 94 ? ? CG 2 TYR 94 ? ? CD2 2 TYR 94 ? ? 125.09 121.00 4.09 0.60 N 43 1 N 2 ASN 95 ? ? CA 2 ASN 95 ? ? CB 2 ASN 95 ? ? 126.82 110.60 16.22 1.80 N 44 1 CD 2 ARG 97 ? ? NE 2 ARG 97 ? ? CZ 2 ARG 97 ? ? 134.59 123.60 10.99 1.40 N 45 1 CG 2 MET 106 ? ? SD 2 MET 106 ? ? CE 2 MET 106 ? ? 90.54 100.20 -9.66 1.60 N 46 1 O 2 VAL 112 ? ? C 2 VAL 112 ? ? N 2 ALA 113 ? ? 132.30 122.70 9.60 1.60 Y 47 1 CB 2 PHE 114 ? ? CG 2 PHE 114 ? ? CD1 2 PHE 114 ? ? 116.40 120.80 -4.40 0.70 N 48 1 O 2 LEU 123 ? ? C 2 LEU 123 ? ? N 2 PRO 124 ? ? 133.12 121.10 12.02 1.90 Y 49 1 C 2 LYS 135 ? ? N 2 GLY 136 ? ? CA 2 GLY 136 ? ? 136.44 122.30 14.14 2.10 Y 50 1 CD 2 ARG 137 ? ? NE 2 ARG 137 ? ? CZ 2 ARG 137 ? ? 136.38 123.60 12.78 1.40 N 51 1 NE 2 ARG 137 ? ? CZ 2 ARG 137 ? ? NH1 2 ARG 137 ? ? 116.89 120.30 -3.41 0.50 N 52 1 NE 2 ARG 137 ? ? CZ 2 ARG 137 ? ? NH2 2 ARG 137 ? ? 123.62 120.30 3.32 0.50 N 53 1 N 2 THR 149 ? ? CA 2 THR 149 ? ? CB 2 THR 149 ? ? 123.68 110.30 13.38 1.90 N 54 1 CA 2 VAL 158 ? ? CB 2 VAL 158 ? ? CG1 2 VAL 158 ? ? 119.93 110.90 9.03 1.50 N 55 1 O 2 GLU 164 ? ? C 2 GLU 164 ? ? N 2 ARG 165 ? ? 133.29 122.70 10.59 1.60 Y 56 1 O 2 PRO 166 ? ? C 2 PRO 166 ? ? N 2 VAL 167 ? ? 133.50 122.70 10.80 1.60 Y 57 1 NE 2 ARG 173 ? ? CZ 2 ARG 173 ? ? NH1 2 ARG 173 ? ? 124.59 120.30 4.29 0.50 N 58 1 NE 2 ARG 173 ? ? CZ 2 ARG 173 ? ? NH2 2 ARG 173 ? ? 115.60 120.30 -4.70 0.50 N 59 1 CD 2 ARG 175 ? ? NE 2 ARG 175 ? ? CZ 2 ARG 175 ? ? 152.35 123.60 28.75 1.40 N 60 1 NH1 2 ARG 175 ? ? CZ 2 ARG 175 ? ? NH2 2 ARG 175 ? ? 111.29 119.40 -8.11 1.10 N 61 1 NE 2 ARG 175 ? ? CZ 2 ARG 175 ? ? NH1 2 ARG 175 ? ? 129.74 120.30 9.44 0.50 N 62 1 CB 2 ASP 178 ? ? CG 2 ASP 178 ? ? OD2 2 ASP 178 ? ? 112.80 118.30 -5.50 0.90 N 63 1 CA 2 CYS 182 ? ? CB 2 CYS 182 ? ? SG 2 CYS 182 ? ? 127.56 114.20 13.36 1.10 N 64 1 CB 2 LYS 186 D ? CA 2 LYS 186 D ? C 2 LYS 186 D ? 126.72 110.40 16.32 2.00 N 65 1 CD 2 ARG 187 ? ? NE 2 ARG 187 ? ? CZ 2 ARG 187 ? ? 143.64 123.60 20.04 1.40 N 66 1 NE 2 ARG 187 ? ? CZ 2 ARG 187 ? ? NH1 2 ARG 187 ? ? 117.25 120.30 -3.05 0.50 N 67 1 NE 2 ARG 187 ? ? CZ 2 ARG 187 ? ? NH2 2 ARG 187 ? ? 125.03 120.30 4.73 0.50 N 68 1 CA 2 CYS 191 ? ? CB 2 CYS 191 ? ? SG 2 CYS 191 ? ? 121.72 114.20 7.52 1.10 N 69 1 CB 2 GLU 192 ? ? CA 2 GLU 192 ? ? C 2 GLU 192 ? ? 125.38 110.40 14.98 2.00 N 70 1 OE1 2 GLU 192 ? ? CD 2 GLU 192 ? ? OE2 2 GLU 192 ? ? 113.72 123.30 -9.58 1.20 N 71 1 CB 2 ASP 194 ? ? CG 2 ASP 194 ? ? OD1 2 ASP 194 ? ? 125.97 118.30 7.67 0.90 N 72 1 CD 2 ARG 206 ? ? NE 2 ARG 206 ? ? CZ 2 ARG 206 ? ? 159.76 123.60 36.16 1.40 N 73 1 NE 2 ARG 206 ? ? CZ 2 ARG 206 ? ? NH1 2 ARG 206 ? ? 116.46 120.30 -3.84 0.50 N 74 1 NE 2 ARG 206 ? ? CZ 2 ARG 206 ? ? NH2 2 ARG 206 ? ? 128.80 120.30 8.50 0.50 N 75 1 N 2 CYS 220 ? ? CA 2 CYS 220 ? ? CB 2 CYS 220 ? ? 121.15 110.80 10.35 1.50 N 76 1 CB 2 ASP 221 ? ? CG 2 ASP 221 ? ? OD1 2 ASP 221 ? ? 124.37 118.30 6.07 0.90 N 77 1 CG 2 ARG 221 A ? CD 2 ARG 221 A ? NE 2 ARG 221 A ? 126.66 111.80 14.86 2.10 N 78 1 CD 2 ARG 221 A ? NE 2 ARG 221 A ? CZ 2 ARG 221 A ? 132.51 123.60 8.91 1.40 N 79 1 NE 2 ARG 221 A ? CZ 2 ARG 221 A ? NH2 2 ARG 221 A ? 123.41 120.30 3.11 0.50 N 80 1 CB 2 ASP 222 ? ? CG 2 ASP 222 ? ? OD2 2 ASP 222 ? ? 112.19 118.30 -6.11 0.90 N 81 1 CB 2 TYR 225 ? ? CG 2 TYR 225 ? ? CD1 2 TYR 225 ? ? 116.28 121.00 -4.72 0.60 N 82 1 N 2 THR 229 ? ? CA 2 THR 229 ? ? CB 2 THR 229 ? ? 123.27 110.30 12.97 1.90 N 83 1 CA 2 VAL 231 ? ? CB 2 VAL 231 ? ? CG1 2 VAL 231 ? ? 120.96 110.90 10.06 1.50 N 84 1 CB 2 ASP 243 ? ? CG 2 ASP 243 ? ? OD2 2 ASP 243 ? ? 112.78 118.30 -5.52 0.90 N 85 1 N 2 GLU 247 ? ? CA 2 GLU 247 ? ? CB 2 GLU 247 ? ? 121.84 110.60 11.24 1.80 N 86 1 CB 3 ASP 55 ? ? CG 3 ASP 55 ? ? OD2 3 ASP 55 ? ? 112.26 118.30 -6.04 0.90 N 87 1 OE1 3 GLU 57 ? ? CD 3 GLU 57 ? ? OE2 3 GLU 57 ? ? 133.30 123.30 10.00 1.20 N 88 1 CG 3 GLU 57 ? ? CD 3 GLU 57 ? ? OE2 3 GLU 57 ? ? 105.90 118.30 -12.40 2.00 N 89 1 OE1 3 GLU 61 ? ? CD 3 GLU 61 ? ? OE2 3 GLU 61 ? ? 131.56 123.30 8.26 1.20 N 90 1 CA 3 LEU 64 ? ? C 3 LEU 64 ? ? O 3 LEU 64 ? ? 106.62 120.10 -13.48 2.10 N 91 1 CD 4 ARG 380 ? ? NE 4 ARG 380 ? ? CZ 4 ARG 380 ? ? 141.88 123.60 18.28 1.40 N 92 1 NE 4 ARG 380 ? ? CZ 4 ARG 380 ? ? NH1 4 ARG 380 ? ? 126.87 120.30 6.57 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE 1 1 G ? -145.75 -157.14 2 1 GLU 1 1 C ? -31.97 -104.56 3 1 ALA 1 1 B ? -172.60 -37.89 4 1 LEU 1 6 ? ? -52.02 -9.83 5 1 PHE 1 7 ? ? -123.31 -94.66 6 1 TYR 1 14 J ? -78.46 37.33 7 1 ILE 1 14 K ? 106.26 -66.57 8 1 SER 2 36 A ? -173.46 129.75 9 1 CYS 2 42 ? ? -164.93 -169.32 10 1 ASN 2 60 G ? -174.09 72.87 11 1 ARG 2 77 A ? -21.20 -72.96 12 1 ARG 2 97 ? ? -47.25 7.17 13 1 GLU 2 97 A ? -140.80 -78.41 14 1 ARG 2 101 ? ? 67.22 71.51 15 1 HIS 2 119 ? ? -177.76 138.63 16 1 ASN 2 204 B ? -162.02 10.30 17 1 SER 2 214 ? ? -103.44 -85.02 18 1 ASP 2 243 ? ? -67.22 -72.45 19 1 GLU 3 61 ? ? -71.96 46.47 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id GLU _pdbx_validate_main_chain_plane.auth_asym_id 2 _pdbx_validate_main_chain_plane.auth_seq_id 192 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 11.02 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id 2 _pdbx_validate_planes.auth_seq_id 233 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.145 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id 4 _pdbx_unobs_or_zero_occ_residues.auth_comp_id PHE _pdbx_unobs_or_zero_occ_residues.auth_seq_id 384 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id D _pdbx_unobs_or_zero_occ_residues.label_comp_id PHE _pdbx_unobs_or_zero_occ_residues.label_seq_id 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 TYS N N N N 372 TYS CA C N S 373 TYS CB C N N 374 TYS CG C Y N 375 TYS CD1 C Y N 376 TYS CD2 C Y N 377 TYS CE1 C Y N 378 TYS CE2 C Y N 379 TYS CZ C Y N 380 TYS OH O N N 381 TYS S S N N 382 TYS O1 O N N 383 TYS O2 O N N 384 TYS O3 O N N 385 TYS C C N N 386 TYS O O N N 387 TYS OXT O N N 388 TYS H H N N 389 TYS H2 H N N 390 TYS HA H N N 391 TYS HB2 H N N 392 TYS HB3 H N N 393 TYS HD1 H N N 394 TYS HD2 H N N 395 TYS HE1 H N N 396 TYS HE2 H N N 397 TYS HO3 H N N 398 TYS HXT H N N 399 VAL N N N N 400 VAL CA C N S 401 VAL C C N N 402 VAL O O N N 403 VAL CB C N N 404 VAL CG1 C N N 405 VAL CG2 C N N 406 VAL OXT O N N 407 VAL H H N N 408 VAL H2 H N N 409 VAL HA H N N 410 VAL HB H N N 411 VAL HG11 H N N 412 VAL HG12 H N N 413 VAL HG13 H N N 414 VAL HG21 H N N 415 VAL HG22 H N N 416 VAL HG23 H N N 417 VAL HXT H N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 TYS N CA sing N N 358 TYS N H sing N N 359 TYS N H2 sing N N 360 TYS CA CB sing N N 361 TYS CA C sing N N 362 TYS CA HA sing N N 363 TYS CB CG sing N N 364 TYS CB HB2 sing N N 365 TYS CB HB3 sing N N 366 TYS CG CD1 doub Y N 367 TYS CG CD2 sing Y N 368 TYS CD1 CE1 sing Y N 369 TYS CD1 HD1 sing N N 370 TYS CD2 CE2 doub Y N 371 TYS CD2 HD2 sing N N 372 TYS CE1 CZ doub Y N 373 TYS CE1 HE1 sing N N 374 TYS CE2 CZ sing Y N 375 TYS CE2 HE2 sing N N 376 TYS CZ OH sing N N 377 TYS OH S sing N N 378 TYS S O1 doub N N 379 TYS S O2 doub N N 380 TYS S O3 sing N N 381 TYS O3 HO3 sing N N 382 TYS C O doub N N 383 TYS C OXT sing N N 384 TYS OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _pdbx_entity_nonpoly.entity_id 5 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DIT _pdbx_initial_refinement_model.details ? #