data_1O8T # _entry.id 1O8T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1O8T PDBE EBI-11810 WWPDB D_1290011810 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1BY6 unspecified 'PEPTIDE OF HUMAN APOLIPOPROTEIN C-II' PDB 1I5J unspecified 'NMR STRUCTURE OF HUMAN APOLIPOPROTEIN C-II IN THE PRESENCE OF SDS' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1O8T _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2002-11-29 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zdunek, J.' 1 'Martinez, G.V.' 2 'Schleucher, J.' 3 'Lycksell, P.O.' 4 'Yin, Y.' 5 'Nilsson, S.' 6 'Shen, Y.' 7 'Olivecrona, G.' 8 'Wijmenga, S.' 9 # _citation.id primary _citation.title ;Global Structure and Dynamics of Human Apolipoprotein Cii in Complex with Micelles: Evidence for Increased Mobility of the Helix Involved in the Activation of Lipoprotein Lipase ; _citation.journal_abbrev Biochemistry _citation.journal_volume 42 _citation.page_first 1872 _citation.page_last ? _citation.year 2003 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12590574 _citation.pdbx_database_id_DOI 10.1021/BI0267184 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Zdunek, J.' 1 primary 'Martinez, G.V.' 2 primary 'Schleucher, J.' 3 primary 'Lycksell, P.O.' 4 primary 'Yin, Y.' 5 primary 'Nilsson, S.' 6 primary 'Shen, Y.' 7 primary 'Olivecrona, G.' 8 primary 'Wijmenga, S.' 9 # _cell.entry_id 1O8T _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1O8T _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'APOLIPOPROTEIN C-II' _entity.formula_weight 8921.864 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name APO-CII # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code TQQPQQDEMPSPTFLTQVKESLSSYWESAKTAAQNLYEKTYLPAVDEKLRDLYSKSTAAMSTYTGIFTDQVLSVLKGEE _entity_poly.pdbx_seq_one_letter_code_can TQQPQQDEMPSPTFLTQVKESLSSYWESAKTAAQNLYEKTYLPAVDEKLRDLYSKSTAAMSTYTGIFTDQVLSVLKGEE _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 GLN n 1 3 GLN n 1 4 PRO n 1 5 GLN n 1 6 GLN n 1 7 ASP n 1 8 GLU n 1 9 MET n 1 10 PRO n 1 11 SER n 1 12 PRO n 1 13 THR n 1 14 PHE n 1 15 LEU n 1 16 THR n 1 17 GLN n 1 18 VAL n 1 19 LYS n 1 20 GLU n 1 21 SER n 1 22 LEU n 1 23 SER n 1 24 SER n 1 25 TYR n 1 26 TRP n 1 27 GLU n 1 28 SER n 1 29 ALA n 1 30 LYS n 1 31 THR n 1 32 ALA n 1 33 ALA n 1 34 GLN n 1 35 ASN n 1 36 LEU n 1 37 TYR n 1 38 GLU n 1 39 LYS n 1 40 THR n 1 41 TYR n 1 42 LEU n 1 43 PRO n 1 44 ALA n 1 45 VAL n 1 46 ASP n 1 47 GLU n 1 48 LYS n 1 49 LEU n 1 50 ARG n 1 51 ASP n 1 52 LEU n 1 53 TYR n 1 54 SER n 1 55 LYS n 1 56 SER n 1 57 THR n 1 58 ALA n 1 59 ALA n 1 60 MET n 1 61 SER n 1 62 THR n 1 63 TYR n 1 64 THR n 1 65 GLY n 1 66 ILE n 1 67 PHE n 1 68 THR n 1 69 ASP n 1 70 GLN n 1 71 VAL n 1 72 LEU n 1 73 SER n 1 74 VAL n 1 75 LEU n 1 76 LYS n 1 77 GLY n 1 78 GLU n 1 79 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ LIVER _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector 'PET29A(+)' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET29A-HAPOCII _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code APC2_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P02655 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1O8T _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 79 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02655 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 101 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 79 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _pdbx_nmr_exptl.experiment_id 1 _pdbx_nmr_exptl.conditions_id 1 _pdbx_nmr_exptl.type 'CBCANHCBCA(CO)NHCBCACO(N) HHNCOSPIN-LOCK HCANHHCC(CO) NH1H-15N NOESY-HSQC2D NOESY1H-15N HNHA15N T115N T215N-{1H} NOE' _pdbx_nmr_exptl.solution_id 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 313 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 4.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength '10 MM ACETIC ACID 380 MM SDS' _pdbx_nmr_exptl_sample_conditions.ionic_strength_units ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength 1 DRX Bruker 600 2 AMX Bruker 500 3 DRX Bruker 400 # _pdbx_nmr_refine.entry_id 1O8T _pdbx_nmr_refine.method 'RESTRAINT MOLECULAR DYNAMICS' _pdbx_nmr_refine.details ;IN ADDITION TO CLASSICAL NMR CONSTRAINTS THREE TYPES OF GLOBAL CONSTRAINTS WERE USED TO DEFINE THE GLOBAL STRUCTURE OF APO-CII IN THE APO-CII/SDS- MICELLE COMPLEX. SCRIPTS FOR THE GLOBAL STRUCTURE DETERMINATION HAVE BEEN WRITTEN AND ARE AVAILABLE UPON REQUEST. FINALLY, CNS WAS USED FOR THE FINAL MINIMIZATION. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1O8T _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 68 _pdbx_nmr_ensemble.conformer_selection_criteria 'LEAST ENERGY, LEAST RESTRAINT VIOLATION' # _pdbx_nmr_representative.entry_id 1O8T _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement X-PLOR3.851 ? BRUNGER 1 'structure solution' XEASY ? ? 2 'structure solution' SYBYL ? ? 3 'structure solution' XPLOR ? ? 4 'structure solution' CNS ? ? 5 # _exptl.entry_id 1O8T _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1O8T _struct.title ;Global Structure and Dynamics of Human Apolipoprotein CII in Complex with Micelles: Evidence for increased mobility of the helix involved in the activation of lipoprotein lipase ; _struct.pdbx_descriptor 'APOLIPOPROTEIN C-II' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1O8T _struct_keywords.pdbx_keywords 'LIPID TRANSPORT' _struct_keywords.text ;APOCII, LPL, ACTIVATION MECHANISM, DOMAIN MOTION, SDS, MICELLE, GLOBAL STRUCTURE, LOCAL STRUCTURE, DYNAMICS, HELIX, LIPID TRANSPORT, LIPID DEGRADATION, CHYLOMICRON ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 16 ? GLU A 38 ? THR A 16 GLU A 38 1 ? 23 HELX_P HELX_P2 2 VAL A 45 ? ALA A 58 ? VAL A 45 ALA A 58 1 ? 14 HELX_P HELX_P3 3 THR A 64 ? VAL A 74 ? THR A 64 VAL A 74 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1O8T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1O8T _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 1 1 THR THR A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 MET 9 9 9 MET MET A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 TRP 26 26 26 TRP TRP A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLN 34 34 34 GLN GLN A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 GLU 47 47 47 GLU GLU A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 ALA 58 58 58 ALA ALA A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 MET 60 60 60 MET MET A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 THR 62 62 62 THR THR A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 ILE 66 66 66 ILE ILE A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 GLN 70 70 70 GLN GLN A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 GLU 79 79 79 GLU GLU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-02-27 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ; HELIX DETERMINATION METHOD: AUTHOR PROVIDED. ; # _pdbx_entry_details.entry_id 1O8T _pdbx_entry_details.compound_details ;APOC-II IS A COMPONENT OF THE VERY LOW DENSITY LIPOPROTEIN (VLDL) FUNCTIONS AS AN ACTIVATOR OF SEVERAL TRIACYLGLYCEROL LIPASES. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 10 ? ? -66.76 76.14 2 1 VAL A 18 ? ? -29.72 -48.52 3 2 GLN A 3 ? ? -163.57 119.06 4 2 PRO A 10 ? ? -63.82 94.04 5 2 VAL A 18 ? ? -29.93 -51.34 6 2 PRO A 43 ? ? -85.87 34.07 7 2 GLU A 78 ? ? -140.83 36.30 8 3 ASP A 7 ? ? -71.21 -156.52 9 3 PHE A 14 ? ? -149.87 -49.03 10 3 VAL A 18 ? ? -29.96 -49.34 11 4 PHE A 14 ? ? -145.73 -79.89 12 4 PRO A 43 ? ? -93.16 44.80 13 5 GLN A 3 ? ? 63.88 71.97 14 5 GLU A 8 ? ? -70.15 -73.32 15 5 PHE A 14 ? ? 82.03 -15.63 16 5 GLU A 78 ? ? -158.59 44.92 17 6 GLN A 2 ? ? 67.57 107.32 18 6 PHE A 14 ? ? -116.80 -70.50 19 6 PRO A 43 ? ? -92.99 35.35 20 7 GLN A 5 ? ? -72.67 -70.60 21 7 GLN A 6 ? ? -67.83 -178.39 22 7 PHE A 14 ? ? -138.95 -59.51 23 7 PRO A 43 ? ? -92.12 33.92 24 8 GLN A 6 ? ? -67.89 73.38 25 8 PRO A 12 ? ? -49.35 103.04 26 8 GLU A 78 ? ? -145.03 38.50 27 9 PHE A 14 ? ? -118.33 -73.27 28 9 VAL A 18 ? ? -29.96 -52.66 29 10 PRO A 4 ? ? -84.82 30.27 30 10 PHE A 14 ? ? -149.39 -50.87 31 10 VAL A 18 ? ? -29.99 -52.05 32 10 GLU A 78 ? ? -168.15 -60.47 33 11 GLN A 2 ? ? 68.12 121.02 34 11 VAL A 18 ? ? -29.73 -54.52 35 11 PRO A 43 ? ? -91.50 33.83 36 12 GLN A 2 ? ? -122.44 -64.41 37 12 PRO A 4 ? ? -88.36 40.27 38 12 GLN A 6 ? ? -67.84 -157.27 39 12 VAL A 18 ? ? -29.35 -50.06 40 12 PRO A 43 ? ? -92.30 48.36 41 13 GLN A 2 ? ? -107.92 48.45 42 13 GLN A 3 ? ? -131.05 -70.03 43 13 VAL A 18 ? ? -29.54 -54.08 44 14 PHE A 14 ? ? -155.87 -55.40 45 14 VAL A 18 ? ? -29.58 -48.02 46 15 PRO A 4 ? ? -69.90 81.08 47 15 VAL A 18 ? ? -29.73 -45.94 48 15 GLU A 78 ? ? -174.19 -73.16 49 16 PRO A 10 ? ? -69.57 86.35 50 16 PHE A 14 ? ? -154.24 -51.75 51 16 GLU A 78 ? ? -172.66 -60.67 52 17 VAL A 18 ? ? -29.69 -48.96 53 17 GLU A 78 ? ? -142.83 36.50 54 18 GLN A 2 ? ? -113.66 50.04 55 18 VAL A 18 ? ? -29.79 -51.03 56 18 PRO A 43 ? ? -92.97 37.55 57 18 GLU A 78 ? ? -129.44 -71.45 58 19 PRO A 43 ? ? -91.14 38.59 59 20 THR A 13 ? ? -71.88 -87.00 60 20 PHE A 14 ? ? 60.34 -83.32 61 20 GLU A 78 ? ? -131.27 -72.69 62 21 GLN A 6 ? ? -67.75 77.39 63 21 PHE A 14 ? ? -124.99 -57.02 64 21 VAL A 18 ? ? -29.59 -45.24 65 21 PRO A 43 ? ? -92.16 30.33 66 22 GLU A 78 ? ? -140.79 -68.29 67 23 GLN A 2 ? ? -155.38 44.51 68 23 GLN A 6 ? ? -67.73 82.77 69 23 PHE A 14 ? ? -151.54 -53.75 70 23 VAL A 18 ? ? -29.99 -45.55 71 23 PRO A 43 ? ? -93.64 42.70 72 24 GLN A 3 ? ? 71.17 146.13 73 24 PHE A 14 ? ? -153.46 -59.10 74 24 GLU A 78 ? ? -150.91 38.33 75 25 ASP A 7 ? ? -71.03 -75.24 76 25 PRO A 43 ? ? -91.18 34.94 77 26 PRO A 12 ? ? -83.46 45.72 78 26 VAL A 18 ? ? -29.63 -45.39 79 27 GLU A 8 ? ? -70.24 -70.87 80 27 PHE A 14 ? ? -150.03 -63.00 81 27 VAL A 18 ? ? -29.66 -53.35 82 27 PRO A 43 ? ? -92.16 31.86 83 28 GLN A 3 ? ? 60.83 65.54 84 28 PHE A 14 ? ? -103.39 -61.28 85 28 VAL A 18 ? ? -29.72 -46.55 86 28 GLU A 78 ? ? -175.09 -54.36 87 30 GLN A 5 ? ? -72.68 -161.45 88 30 PHE A 14 ? ? 73.70 -69.08 89 30 VAL A 18 ? ? -29.94 -46.68 90 30 PRO A 43 ? ? -88.19 43.64 91 31 GLU A 8 ? ? -70.31 -74.32 92 31 PHE A 14 ? ? -125.02 -60.87 93 31 VAL A 18 ? ? -29.91 -53.77 94 31 PRO A 43 ? ? -93.37 35.95 95 32 PRO A 4 ? ? -90.22 30.78 96 32 PHE A 14 ? ? -142.18 -43.19 97 32 VAL A 18 ? ? -29.51 -49.18 98 32 PRO A 43 ? ? -91.98 31.77 99 33 VAL A 18 ? ? -29.90 -48.97 100 34 GLN A 2 ? ? -103.54 52.11 101 34 GLN A 6 ? ? -67.75 -73.07 102 34 VAL A 18 ? ? -29.62 -45.76 103 34 PRO A 43 ? ? -89.88 32.31 104 35 PHE A 14 ? ? -149.54 -67.22 105 35 VAL A 18 ? ? -29.83 -48.79 106 35 PRO A 43 ? ? -91.41 34.41 107 35 GLU A 78 ? ? -153.90 35.43 108 36 GLN A 6 ? ? -67.67 -74.59 109 36 PHE A 14 ? ? -107.21 -63.96 110 36 GLU A 78 ? ? -170.59 -65.62 111 37 GLN A 2 ? ? 60.86 86.32 112 37 PRO A 10 ? ? -76.81 -168.10 113 37 PRO A 12 ? ? -70.05 -163.90 114 37 THR A 13 ? ? -71.84 -78.08 115 37 PHE A 14 ? ? 69.89 -66.99 116 38 GLN A 2 ? ? -109.31 -66.79 117 38 PHE A 14 ? ? -122.27 -69.15 118 38 PRO A 43 ? ? -93.36 42.67 119 39 GLN A 3 ? ? 63.75 70.78 120 39 ASP A 7 ? ? -71.08 -75.03 121 39 VAL A 18 ? ? -29.81 -46.96 122 39 PRO A 43 ? ? -91.24 37.88 123 39 GLU A 78 ? ? -173.22 -55.45 124 40 PRO A 4 ? ? -67.80 82.75 125 40 GLN A 6 ? ? -67.91 71.50 126 40 PRO A 12 ? ? -72.96 -168.98 127 40 GLU A 78 ? ? -151.06 33.25 128 42 GLN A 2 ? ? 71.29 142.01 129 42 THR A 13 ? ? -71.91 -76.27 130 42 PHE A 14 ? ? 65.44 -77.96 131 43 PHE A 14 ? ? -134.56 -56.67 132 43 PRO A 43 ? ? -91.31 40.57 133 43 GLU A 78 ? ? -146.93 38.93 134 44 PHE A 14 ? ? -166.42 -61.13 135 44 VAL A 18 ? ? -29.18 -50.31 136 44 PRO A 43 ? ? -93.08 37.03 137 44 GLU A 78 ? ? -103.86 -64.78 138 45 PHE A 14 ? ? -173.40 -61.92 139 46 THR A 13 ? ? -71.96 -71.67 140 46 PHE A 14 ? ? 60.14 -87.89 141 46 VAL A 18 ? ? -29.56 -46.88 142 46 GLU A 78 ? ? -152.29 36.82 143 47 GLN A 6 ? ? -68.00 65.76 144 47 PHE A 14 ? ? -103.72 -64.97 145 47 VAL A 18 ? ? -29.99 -53.24 146 48 GLN A 6 ? ? -67.99 65.84 147 48 TYR A 41 ? ? -173.94 44.50 148 49 GLN A 3 ? ? 60.66 60.71 149 49 GLN A 6 ? ? -67.81 -173.10 150 49 THR A 13 ? ? -71.92 -79.13 151 50 GLN A 3 ? ? -166.25 -63.20 152 50 PHE A 14 ? ? -130.48 -53.52 153 50 GLU A 78 ? ? -170.70 -68.00 154 51 GLN A 6 ? ? 24.35 -101.62 155 51 PRO A 12 ? ? -68.52 -171.65 156 51 PHE A 14 ? ? -131.89 -58.97 157 51 VAL A 18 ? ? -29.98 -41.27 158 52 LEU A 42 ? ? 67.73 67.56 159 52 PRO A 43 ? ? -95.14 -76.57 160 52 GLU A 78 ? ? -153.83 40.17 161 53 PHE A 14 ? ? -130.43 -71.14 162 53 GLU A 78 ? ? -172.79 -61.94 163 54 GLN A 3 ? ? -151.54 71.95 164 54 VAL A 18 ? ? -29.76 -46.99 165 54 GLU A 78 ? ? -172.45 -60.71 166 55 GLN A 6 ? ? -67.81 -175.44 167 55 VAL A 18 ? ? -29.75 -49.73 168 55 PRO A 43 ? ? -90.69 34.99 169 55 GLU A 78 ? ? -147.82 -62.82 170 56 PHE A 14 ? ? -160.73 -52.81 171 57 GLN A 2 ? ? 68.09 108.21 172 57 PRO A 10 ? ? -67.00 80.88 173 57 PRO A 43 ? ? -92.97 36.83 174 57 GLU A 78 ? ? -149.80 -61.34 175 58 GLN A 3 ? ? -161.23 -62.07 176 58 GLN A 6 ? ? -67.72 -177.13 177 59 PRO A 4 ? ? -69.92 82.37 178 59 GLN A 6 ? ? -67.81 75.16 179 59 GLU A 78 ? ? -144.51 37.47 180 60 VAL A 18 ? ? -29.80 -44.32 181 60 PRO A 43 ? ? -92.81 36.52 182 61 GLN A 2 ? ? 57.37 84.51 183 61 GLN A 3 ? ? -169.77 64.69 184 61 GLN A 5 ? ? -72.56 -74.07 185 61 PRO A 12 ? ? -66.82 91.33 186 61 PHE A 14 ? ? -143.10 -62.02 187 61 GLU A 78 ? ? -173.34 -55.13 188 62 GLN A 6 ? ? -67.81 -176.44 189 62 PRO A 12 ? ? -54.57 105.88 190 62 PHE A 14 ? ? -106.18 -66.24 191 63 PRO A 10 ? ? -72.52 -167.76 192 63 PHE A 14 ? ? -168.28 -65.55 193 63 VAL A 18 ? ? -29.52 -55.48 194 63 GLU A 78 ? ? -74.38 -74.31 195 64 PHE A 14 ? ? 79.80 -43.84 196 64 VAL A 18 ? ? -29.45 -45.99 197 64 PRO A 43 ? ? -92.53 41.30 198 65 GLN A 6 ? ? -67.87 71.88 199 65 PHE A 14 ? ? -125.89 -63.89 200 65 PRO A 43 ? ? -92.67 40.31 201 65 VAL A 45 ? ? -27.78 -65.55 202 65 GLU A 78 ? ? -149.00 38.30 203 66 LEU A 42 ? ? 41.93 72.27 204 66 PRO A 43 ? ? -92.75 -69.98 205 66 GLU A 78 ? ? -147.30 33.90 206 67 GLN A 6 ? ? -67.87 67.79 207 67 PRO A 12 ? ? -79.03 -159.42 208 67 PHE A 14 ? ? 84.23 -49.53 209 67 VAL A 18 ? ? -29.97 -50.49 210 67 PRO A 43 ? ? -93.38 -62.34 211 67 GLU A 78 ? ? -74.50 -76.58 212 68 GLN A 3 ? ? -170.65 -61.13 213 68 TYR A 41 ? ? -65.78 -79.65 214 68 LEU A 42 ? ? 174.37 -54.09 215 68 VAL A 45 ? ? -42.72 -77.00 #