data_1OSW # _entry.id 1OSW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1OSW pdb_00001osw 10.2210/pdb1osw/pdb RCSB RCSB018635 ? ? WWPDB D_1000018635 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1OSW _pdbx_database_status.recvd_initial_deposition_date 2003-03-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yuan, Y.' 1 'Kerwood, D.J.' 2 'Paoletti, A.C.' 3 'Shubsda, M.F.' 4 'Borer, P.N.' 5 # _citation.id primary _citation.title 'Stem of SL1 RNA in HIV-1: Structure and Nucleocapsid Protein Binding for a 1X3 Internal Loop' _citation.journal_abbrev Biochemistry _citation.journal_volume 42 _citation.page_first 5259 _citation.page_last 5269 _citation.year 2003 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12731867 _citation.pdbx_database_id_DOI 10.1021/bi034084a # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yuan, Y.' 1 ? primary 'Kerwood, D.J.' 2 ? primary 'Paoletti, A.C.' 3 ? primary 'Shubsda, M.F.' 4 ? primary 'Borer, P.N.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description "5'-R(*GP*GP*AP*GP*GP*CP*GP*CP*UP*AP*CP*GP*GP*CP*GP*AP*GP*GP*CP*UP*CP*CP*A)-3'" _entity.formula_weight 7472.528 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details 'stem of SL1 RNA' # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGAGGCGCUACGGCGAGGCUCCA _entity_poly.pdbx_seq_one_letter_code_can GGAGGCGCUACGGCGAGGCUCCA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 G n 1 5 G n 1 6 C n 1 7 G n 1 8 C n 1 9 U n 1 10 A n 1 11 C n 1 12 G n 1 13 G n 1 14 C n 1 15 G n 1 16 A n 1 17 G n 1 18 G n 1 19 C n 1 20 U n 1 21 C n 1 22 C n 1 23 A n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'RNA sequence obtained from Dharmacon' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1OSW _struct_ref.pdbx_db_accession 1OSW _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1OSW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 23 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1OSW _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 23 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 23 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 '2D TOCSY' 3 1 1 HP-COSY 4 1 2 '2D NOESY' 5 1 1 'H-C HSQC' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 300 ambient 6.3 '25 mM NaCl' ? K 2 278 ambient 5.5 '25 mM NaCl' ? K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1 mM SL1i RNA; 25mM NaCl, 5mM sodium phosphate, 0.1mM EDTA, 0.01% NaN3' _pdbx_nmr_sample_details.solvent_system '99.996% D2O or 90% D2O, 10% H2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker DRX 500 2 ? Bruker DRX 600 # _pdbx_nmr_refine.entry_id 1OSW _pdbx_nmr_refine.method 'DYANA followed by molecular dynamics using AMBER' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1OSW _pdbx_nmr_details.text ;Structures were determined using 2D NOESY at different temperatures and mixing times. The last residue, A23, was eliminated from the pdb file due to ambiguity in orientation. ; # _pdbx_nmr_ensemble.entry_id 1OSW _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 23 _pdbx_nmr_ensemble.conformer_selection_criteria ;structures with acceptable covalent geometry,structures with the least restraint violations,structures with the lowest energy,target function ; _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1OSW _pdbx_nmr_representative.conformer_id 17 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 2.6 collection Bruker 1 NMRZ/TRIAD 6.1 processing Tripos 2 MARDIGRAS 3.2 'iterative matrix relaxation' 'University of California, San Francisco' 3 DYANA 1.5 'structure solution' 'Guntert, P., Mumenthaler, C. and Wuthrich, K.' 4 Amber 5.0 refinement 'University of California, San Francisco' 5 # _exptl.entry_id 1OSW _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1OSW _struct.title 'The Stem of SL1 RNA in HIV-1: Structure and Nucleocapsid Protein Binding for a 1X3 Internal Loop' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1OSW _struct_keywords.pdbx_keywords RNA _struct_keywords.text RNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 22 N3 ? ? A G 1 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 22 O2 ? ? A G 1 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 22 N4 ? ? A G 1 A C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 21 N3 ? ? A G 2 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 21 O2 ? ? A G 2 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 21 N4 ? ? A G 2 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 20 N3 ? ? A A 3 A U 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 20 O4 ? ? A A 3 A U 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 4 N1 ? ? ? 1_555 A C 19 N3 ? ? A G 4 A C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 4 N2 ? ? ? 1_555 A C 19 O2 ? ? A G 4 A C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 4 O6 ? ? ? 1_555 A C 19 N4 ? ? A G 4 A C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N1 ? ? ? 1_555 A A 16 N1 ? ? A G 5 A A 16 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 A A 16 N6 ? ? A G 5 A A 16 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog14 hydrog ? ? A C 6 N3 ? ? ? 1_555 A G 15 N1 ? ? A C 6 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 6 N4 ? ? ? 1_555 A G 15 O6 ? ? A C 6 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 6 O2 ? ? ? 1_555 A G 15 N2 ? ? A C 6 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 14 N3 ? ? A G 7 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 14 O2 ? ? A G 7 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 14 N4 ? ? A G 7 A C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 13 N1 ? ? A C 8 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 13 O6 ? ? A C 8 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 13 N2 ? ? A C 8 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 9 O2 ? ? ? 1_555 A G 12 N1 ? ? A U 9 A G 12 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog24 hydrog ? ? A G 12 N2 ? ? ? 1_555 A G 13 N3 ? ? A G 12 A G 13 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1OSW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1OSW _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _database_PDB_caveat.text 'CHIRALITY ERRORS EXIST IN SOME MODELS.' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 A 3 3 3 A A A . n A 1 4 G 4 4 4 G G A . n A 1 5 G 5 5 5 G G A . n A 1 6 C 6 6 6 C C A . n A 1 7 G 7 7 7 G G A . n A 1 8 C 8 8 8 C C A . n A 1 9 U 9 9 9 U U A . n A 1 10 A 10 10 10 A A A . n A 1 11 C 11 11 11 C C A . n A 1 12 G 12 12 12 G G A . n A 1 13 G 13 13 13 G G A . n A 1 14 C 14 14 14 C C A . n A 1 15 G 15 15 15 G G A . n A 1 16 A 16 16 16 A A A . n A 1 17 G 17 17 17 G G A . n A 1 18 G 18 18 18 G G A . n A 1 19 C 19 19 19 C C A . n A 1 20 U 20 20 20 U U A . n A 1 21 C 21 21 21 C C A . n A 1 22 C 22 22 22 C C A . n A 1 23 A 23 23 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-05-20 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.90 108.50 5.40 0.70 N 2 1 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 114.59 108.50 6.09 0.70 N 3 1 "C3'" A G 18 ? ? "O3'" A G 18 ? ? P A C 19 ? ? 127.91 119.70 8.21 1.20 Y 4 1 "O4'" A C 22 ? ? "C1'" A C 22 ? ? N1 A C 22 ? ? 112.82 108.50 4.32 0.70 N 5 2 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.31 108.50 4.81 0.70 N 6 2 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 112.75 108.50 4.25 0.70 N 7 3 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 114.23 108.50 5.73 0.70 N 8 4 "O4'" A A 3 ? ? "C1'" A A 3 ? ? N9 A A 3 ? ? 112.98 108.50 4.48 0.70 N 9 4 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.90 108.50 5.40 0.70 N 10 4 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 112.95 108.50 4.45 0.70 N 11 4 "O4'" A C 22 ? ? "C1'" A C 22 ? ? N1 A C 22 ? ? 113.11 108.50 4.61 0.70 N 12 5 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.56 108.50 5.06 0.70 N 13 6 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.22 108.50 4.72 0.70 N 14 6 "O4'" A U 20 ? ? "C1'" A U 20 ? ? N1 A U 20 ? ? 112.80 108.50 4.30 0.70 N 15 7 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.50 108.50 5.00 0.70 N 16 7 "C1'" A G 12 ? ? "O4'" A G 12 ? ? "C4'" A G 12 ? ? 105.39 109.70 -4.31 0.70 N 17 7 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 114.47 108.50 5.97 0.70 N 18 7 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.92 108.50 5.42 0.70 N 19 8 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.64 108.50 5.14 0.70 N 20 8 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 113.22 108.50 4.72 0.70 N 21 8 "O4'" A C 22 ? ? "C1'" A C 22 ? ? N1 A C 22 ? ? 112.87 108.50 4.37 0.70 N 22 9 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.94 108.50 5.44 0.70 N 23 9 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 112.71 108.50 4.21 0.70 N 24 10 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.32 108.50 4.82 0.70 N 25 10 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.40 108.50 4.90 0.70 N 26 10 "O4'" A G 17 ? ? "C1'" A G 17 ? ? N9 A G 17 ? ? 113.65 108.50 5.15 0.70 N 27 11 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.01 108.50 4.51 0.70 N 28 11 "O4'" A U 20 ? ? "C1'" A U 20 ? ? N1 A U 20 ? ? 112.95 108.50 4.45 0.70 N 29 12 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.59 108.50 5.09 0.70 N 30 13 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.84 108.50 5.34 0.70 N 31 13 "O4'" A U 20 ? ? "C1'" A U 20 ? ? N1 A U 20 ? ? 112.93 108.50 4.43 0.70 N 32 14 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.64 108.50 5.14 0.70 N 33 15 "O4'" A G 18 ? ? "C1'" A G 18 ? ? N9 A G 18 ? ? 113.08 108.50 4.58 0.70 N 34 15 "C3'" A G 18 ? ? "O3'" A G 18 ? ? P A C 19 ? ? 128.05 119.70 8.35 1.20 Y 35 16 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.66 108.50 5.16 0.70 N 36 16 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 112.87 108.50 4.37 0.70 N 37 16 "O4'" A C 19 ? ? "C1'" A C 19 ? ? N1 A C 19 ? ? 113.74 108.50 5.24 0.70 N 38 16 "O4'" A U 20 ? ? "C1'" A U 20 ? ? N1 A U 20 ? ? 112.93 108.50 4.43 0.70 N 39 17 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.42 108.50 4.92 0.70 N 40 17 N3 A G 12 ? ? C4 A G 12 ? ? C5 A G 12 ? ? 125.50 128.60 -3.10 0.50 N 41 18 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.10 108.50 4.60 0.70 N 42 18 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 114.18 108.50 5.68 0.70 N 43 18 "O4'" A U 20 ? ? "C1'" A U 20 ? ? N1 A U 20 ? ? 113.04 108.50 4.54 0.70 N 44 19 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.55 108.50 5.05 0.70 N 45 19 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.18 108.50 4.68 0.70 N 46 19 "O4'" A C 22 ? ? "C1'" A C 22 ? ? N1 A C 22 ? ? 112.90 108.50 4.40 0.70 N 47 20 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 113.17 108.50 4.67 0.70 N 48 20 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.27 108.50 4.77 0.70 N 49 20 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.12 108.50 4.62 0.70 N 50 20 "O4'" A U 20 ? ? "C1'" A U 20 ? ? N1 A U 20 ? ? 113.01 108.50 4.51 0.70 N 51 20 "O4'" A C 22 ? ? "C1'" A C 22 ? ? N1 A C 22 ? ? 112.94 108.50 4.44 0.70 N 52 21 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.77 108.50 5.27 0.70 N 53 21 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 113.18 108.50 4.68 0.70 N 54 22 "O4'" A G 1 ? ? "C1'" A G 1 ? ? N9 A G 1 ? ? 112.82 108.50 4.32 0.70 N 55 22 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 112.75 108.50 4.25 0.70 N 56 22 "O4'" A U 20 ? ? "C1'" A U 20 ? ? N1 A U 20 ? ? 113.23 108.50 4.73 0.70 N 57 23 "O4'" A C 6 ? ? "C1'" A C 6 ? ? N1 A C 6 ? ? 113.87 108.50 5.37 0.70 N 58 23 "O4'" A C 14 ? ? "C1'" A C 14 ? ? N1 A C 14 ? ? 114.65 108.50 6.15 0.70 N 59 23 "O4'" A U 20 ? ? "C1'" A U 20 ? ? N1 A U 20 ? ? 113.12 108.50 4.62 0.70 N 60 23 "O4'" A C 21 ? ? "C1'" A C 21 ? ? N1 A C 21 ? ? 112.94 108.50 4.44 0.70 N 61 23 "O4'" A C 22 ? ? "C1'" A C 22 ? ? N1 A C 22 ? ? 112.72 108.50 4.22 0.70 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 G A 12 ? ? 0.068 'SIDE CHAIN' 2 2 G A 7 ? ? 0.056 'SIDE CHAIN' 3 2 C A 14 ? ? 0.069 'SIDE CHAIN' 4 3 G A 4 ? ? 0.067 'SIDE CHAIN' 5 3 G A 18 ? ? 0.073 'SIDE CHAIN' 6 4 U A 9 ? ? 0.072 'SIDE CHAIN' 7 4 G A 18 ? ? 0.078 'SIDE CHAIN' 8 4 U A 20 ? ? 0.060 'SIDE CHAIN' 9 4 C A 21 ? ? 0.065 'SIDE CHAIN' 10 5 C A 6 ? ? 0.078 'SIDE CHAIN' 11 5 G A 18 ? ? 0.061 'SIDE CHAIN' 12 6 G A 12 ? ? 0.055 'SIDE CHAIN' 13 6 G A 13 ? ? 0.076 'SIDE CHAIN' 14 7 G A 7 ? ? 0.061 'SIDE CHAIN' 15 7 U A 9 ? ? 0.065 'SIDE CHAIN' 16 7 G A 12 ? ? 0.057 'SIDE CHAIN' 17 7 C A 19 ? ? 0.098 'SIDE CHAIN' 18 7 U A 20 ? ? 0.072 'SIDE CHAIN' 19 8 U A 9 ? ? 0.098 'SIDE CHAIN' 20 8 C A 21 ? ? 0.058 'SIDE CHAIN' 21 9 U A 9 ? ? 0.076 'SIDE CHAIN' 22 9 G A 18 ? ? 0.088 'SIDE CHAIN' 23 10 U A 9 ? ? 0.074 'SIDE CHAIN' 24 11 G A 1 ? ? 0.061 'SIDE CHAIN' 25 11 G A 18 ? ? 0.076 'SIDE CHAIN' 26 13 U A 9 ? ? 0.087 'SIDE CHAIN' 27 13 G A 13 ? ? 0.080 'SIDE CHAIN' 28 13 G A 18 ? ? 0.049 'SIDE CHAIN' 29 13 U A 20 ? ? 0.063 'SIDE CHAIN' 30 14 G A 4 ? ? 0.055 'SIDE CHAIN' 31 14 U A 9 ? ? 0.076 'SIDE CHAIN' 32 14 G A 12 ? ? 0.059 'SIDE CHAIN' 33 14 G A 18 ? ? 0.052 'SIDE CHAIN' 34 15 G A 7 ? ? 0.050 'SIDE CHAIN' 35 15 G A 12 ? ? 0.053 'SIDE CHAIN' 36 16 C A 11 ? ? 0.085 'SIDE CHAIN' 37 17 G A 7 ? ? 0.056 'SIDE CHAIN' 38 17 C A 19 ? ? 0.081 'SIDE CHAIN' 39 17 C A 21 ? ? 0.078 'SIDE CHAIN' 40 18 C A 11 ? ? 0.066 'SIDE CHAIN' 41 18 C A 14 ? ? 0.073 'SIDE CHAIN' 42 19 G A 17 ? ? 0.060 'SIDE CHAIN' 43 19 G A 18 ? ? 0.056 'SIDE CHAIN' 44 20 G A 7 ? ? 0.058 'SIDE CHAIN' 45 20 C A 19 ? ? 0.087 'SIDE CHAIN' 46 21 G A 7 ? ? 0.056 'SIDE CHAIN' 47 21 G A 12 ? ? 0.064 'SIDE CHAIN' 48 21 A A 16 ? ? 0.063 'SIDE CHAIN' 49 22 G A 5 ? ? 0.054 'SIDE CHAIN' 50 22 G A 7 ? ? 0.058 'SIDE CHAIN' 51 22 U A 9 ? ? 0.087 'SIDE CHAIN' 52 22 G A 12 ? ? 0.080 'SIDE CHAIN' 53 22 G A 13 ? ? 0.051 'SIDE CHAIN' 54 22 G A 18 ? ? 0.067 'SIDE CHAIN' 55 22 C A 22 ? ? 0.090 'SIDE CHAIN' 56 23 C A 14 ? ? 0.096 'SIDE CHAIN' 57 23 G A 18 ? ? 0.055 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A A 23 ? A A 23 2 2 Y 1 A A 23 ? A A 23 3 3 Y 1 A A 23 ? A A 23 4 4 Y 1 A A 23 ? A A 23 5 5 Y 1 A A 23 ? A A 23 6 6 Y 1 A A 23 ? A A 23 7 7 Y 1 A A 23 ? A A 23 8 8 Y 1 A A 23 ? A A 23 9 9 Y 1 A A 23 ? A A 23 10 10 Y 1 A A 23 ? A A 23 11 11 Y 1 A A 23 ? A A 23 12 12 Y 1 A A 23 ? A A 23 13 13 Y 1 A A 23 ? A A 23 14 14 Y 1 A A 23 ? A A 23 15 15 Y 1 A A 23 ? A A 23 16 16 Y 1 A A 23 ? A A 23 17 17 Y 1 A A 23 ? A A 23 18 18 Y 1 A A 23 ? A A 23 19 19 Y 1 A A 23 ? A A 23 20 20 Y 1 A A 23 ? A A 23 21 21 Y 1 A A 23 ? A A 23 22 22 Y 1 A A 23 ? A A 23 23 23 Y 1 A A 23 ? A A 23 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1OSW 'double helix' 1OSW 'a-form double helix' 1OSW 'bulge loop' 1OSW 'mismatched base pair' 1OSW 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 22 1_555 -0.347 0.051 -0.344 -25.698 -11.764 -1.669 1 A_G1:C22_A A 1 ? A 22 ? 19 1 1 A G 2 1_555 A C 21 1_555 -0.246 0.090 -0.270 -19.201 -13.755 -3.455 2 A_G2:C21_A A 2 ? A 21 ? 19 1 1 A A 3 1_555 A U 20 1_555 -0.049 0.111 -0.176 -14.790 -15.385 -3.702 3 A_A3:U20_A A 3 ? A 20 ? 20 1 1 A G 4 1_555 A C 19 1_555 -0.627 0.057 -0.619 -36.587 -37.646 2.737 4 A_G4:C19_A A 4 ? A 19 ? 19 1 1 A G 5 1_555 A A 16 1_555 0.573 1.704 -0.307 13.144 8.071 -20.772 5 A_G5:A16_A A 5 ? A 16 ? 8 1 1 A C 6 1_555 A G 15 1_555 0.281 0.038 -0.587 12.731 -15.863 1.248 6 A_C6:G15_A A 6 ? A 15 ? 19 1 1 A G 7 1_555 A C 14 1_555 -1.000 -0.161 -0.101 13.792 -10.972 2.916 7 A_G7:C14_A A 7 ? A 14 ? 19 1 1 A C 8 1_555 A G 13 1_555 0.102 0.108 -0.265 23.123 -1.379 -3.433 8 A_C8:G13_A A 8 ? A 13 ? 19 1 1 A U 9 1_555 A G 12 1_555 0.148 -5.336 0.370 -8.775 -47.768 -151.640 9 A_U9:G12_A A 9 ? A 12 ? ? 2 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 22 1_555 A G 2 1_555 A C 21 1_555 0.532 -2.066 3.316 6.882 4.422 28.298 -5.000 0.405 3.009 8.814 -13.719 29.433 1 AA_G1G2:C21C22_AA A 1 ? A 22 ? A 2 ? A 21 ? 1 A G 2 1_555 A C 21 1_555 A A 3 1_555 A U 20 1_555 0.191 -1.727 3.278 2.483 3.577 30.035 -4.001 0.122 3.062 6.857 -4.760 30.342 2 AA_G2A3:U20C21_AA A 2 ? A 21 ? A 3 ? A 20 ? 1 A A 3 1_555 A U 20 1_555 A G 4 1_555 A C 19 1_555 0.158 -1.397 4.104 5.138 9.533 30.652 -4.504 0.797 3.504 17.367 -9.360 32.466 3 AA_A3G4:C19U20_AA A 3 ? A 20 ? A 4 ? A 19 ? 1 A G 4 1_555 A C 19 1_555 A G 5 1_555 A A 16 1_555 1.958 -2.102 5.084 -44.804 -16.980 63.847 -0.935 -3.477 3.666 -14.189 37.441 78.274 4 AA_G4G5:A16C19_AA A 4 ? A 19 ? A 5 ? A 16 ? 1 A G 5 1_555 A A 16 1_555 A C 6 1_555 A G 15 1_555 0.510 -2.166 3.255 -1.697 7.681 23.504 -7.115 -1.644 2.395 18.214 4.024 24.768 5 AA_G5C6:G15A16_AA A 5 ? A 16 ? A 6 ? A 15 ? 1 A C 6 1_555 A G 15 1_555 A G 7 1_555 A C 14 1_555 -0.169 -0.529 3.397 -4.298 20.958 34.405 -3.150 -0.244 2.665 31.903 6.543 40.342 6 AA_C6G7:C14G15_AA A 6 ? A 15 ? A 7 ? A 14 ? 1 A G 7 1_555 A C 14 1_555 A C 8 1_555 A G 13 1_555 -0.354 -0.948 3.249 -0.907 9.097 29.496 -3.471 0.497 2.846 17.349 1.730 30.850 7 AA_G7C8:G13C14_AA A 7 ? A 14 ? A 8 ? A 13 ? 1 A C 8 1_555 A G 13 1_555 A U 9 1_555 A G 12 1_555 -4.226 1.165 2.785 12.786 20.004 92.817 0.498 3.050 2.484 13.636 -8.716 95.128 8 AA_C8U9:G12G13_AA A 8 ? A 13 ? A 9 ? A 12 ? #